New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 3122383	72 (1.870)	6 (0.170)	5/292	NT	8.3%	coding (753/765 nt)	glcC	glycolate‑inducible glc operon transcriptional repressor; autorepressor
	?	CP009273	= 3122500	66 (1.850)					pseudogene (1003/1101 nt)	yghO	pseudogene, DNA‑binding transcriptional regulator homology

GCGCGGATCTACAACGCGGTGTTGCAGCGGCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCTTCAATCAATAACAGCGCAATCACCGGGCCGATGCGGCTGAACTGATACTCGTCGCGCACGCCCATCAGCGGTACTCGCGCAGTTCGCACACCGCTGACTTTCAAACGCCACAGCAATTTTGCCCAGCCGAAGGGAAAGAGCGATCCGTTCAGATCGGCAATCGCCTCGTTGATGTTCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGAT  >  CP009273/3122237‑3122773                                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                                                  gcgcGGATCTACAAAGCGGTGTTGCAGCGGCTGACGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGAAATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTTCGCCCCAATGCGTTCCAGCATGTTATTCCTGCCCGTATTGGTTTCGAGGCTCCATGAcatctccagc                                                                                                                                                                                                                                                                         <  1:194391‑M2/274‑11 (MQ=255)                 cgGGGTTGCAGCGGCTGCCGGACGTCGCCCAGCGCGCAGCACGCGATCATGCGCGGCCCGTGAAAAAGAATCCGCACGATATCGCGCTGGAAGGCCACCATTTGATTCGCTCGCCGGTGCCGCTGGAGATGAACCTGAGCTACCGTGCATTAAAACTGCGTTTCATAACATCGGTAACTCTTGTACGGCTCCGCCCCAATGCGATCAAGCATGGTATTCATGCTTGTATTGGTTGCGTGGCTCCATGACATCTCCAGCGGCTCGATTTTCtgggg                                                                                                                                                                                                                                                        >  2:237038/1‑273 (MQ=255)                    tgtTGCAGCGGCTGCCGCACGTCGCCGAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGATAACGCTTGTACNGCTCCGCCNCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGc                                                                                                                                                                                                                                                     >  1:472365/1‑275 (MQ=255)                       tGCAGCGGCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCaaa                                                                                                                                                                                                                                                  <  1:436199/275‑1 (MQ=255)                         cAGCGGCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACg                                                                                                                                                                                                                                                <  1:246655/275‑1 (MQ=255)                           gCGGCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGa                                                                                                                                                                                                                                              <  1:326749/275‑1 (MQ=255)                              gCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGCTCTTCCGGCGGGCAAACGGATc                                                                                                                                                                                                                                            >  1:298862/1‑274 (MQ=255)                              gCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATc                                                                                                                                                                                                                                            >  1:82682/1‑274 (MQ=255)                                   ccctcGTCTCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTTAAAAAGAATCTCCACGATATCGAGCTGGAATGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTACCGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCCAGGATCCATGACATCTCCAGAACATCGATCTTCCGTCGGGCAAACGGATCGCGTa                                                                                                                                                                                                                                       <  1:452488/270‑1 (MQ=255)                                         tgtgccAGGGGGCAGCAGGTGATTATGTGCGGAACGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATGTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCtt                                                                                                                                                                                                                                 <  1:371162/270‑1 (MQ=255)                                         tCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCtt                                                                                                                                                                                                                                 <  2:82681/274‑1 (MQ=255)                                          ggaggaGCGGGCAGAAAGCGATAANGTGCGGACCGTGAAAAAGAATCTCCACGATATCGATCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCtt                                                                                                                                                                                                                                 <  2:472358/268‑1 (MQ=255)                                          cccccAGCGGGCCGCACGCGAGCATGTGCGGCCCGTTAACAAGAATCTCCACGATATCGGGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCTtca                                                                                                                                                                                                                               <  2:298856/273‑1 (MQ=255)                                           gCCCATCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCTCGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCTGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCGAATGCGTTCCAGCATGTTATTCATGCCTGTATGGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACTGATCGCGTAAGGCtt                                                                                                                                                                                                                                 <  1:119947/272‑1 (MQ=255)                                           gCCCAGCGCGCAGCACTCGATCATGTGCGGACCGTGAAAAAGAAGCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCtt                                                                                                                                                                                                                                 <  1:237043/272‑1 (MQ=255)                                                  gcgcAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCTTCAATCAATaa                                                                                                                                                                                                                       >  1:236935/1‑275 (MQ=255)                                                                    tgCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCAGCCCCAATGCGGTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATCACATCTCCAGCGCATCGATCTTCCGGCGGGAAAACGGATCGCGTAAGGATGCAATCAATAACAGCACAATCACCgaccc                                                                                                                                                                                                     >  1:693982/1‑271 (MQ=255)                                                                        gagcggaaaaaaGAGGCTCCGCGGTATCGGGCTGGAAGGCCACCGTTGGATTCGCTCGGCGTTTCCGCTGGAGATGTACCTTAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGTTTGTACGGCTCCGCCCAAATGCGGTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGGTCAATCACATCTCCAGCGCATCGATCTTCCGGCGGACAGCCGGATCGCGTAAGGCTTCAATCAATAACAGCGCAATCACCGTGCCGATg                                                                                                                                                                                                 <  2:194388/268‑1 (MQ=255)                                                                         aCCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCaaa                                                                                                                                                                                                                                                  >  1:87101/1‑225 (MQ=255)                                                                             tGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGa                                                                                                                                                                                                                                              <  2:87100/225‑1 (MQ=255)                                                                                                          gAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGCTCGCGTAAGGCTTCAATCAATAACAGCGCAATCACCGGGCCGATGCGGCTGAACTGATCCTCATAGCACACGCCCa                                                                                                                                                                  >  1:700594/1‑272 (MQ=255)                                                                                                          gAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCTTCAATCAATAACAGCGCAATCACCGGGCCGATGCGGCTGAACTGATACTCGTCGCGCACGCCCATCa                                                                                                                                                               >  1:115232/1‑275 (MQ=255)                                                                                                           aaGGCCACCATTTGATTCACCAGGCGGTGCCGCTGGAGATGAAACTTAGTTTGCTGGTATTAAATCTGCTTTTCATACGATCGGGAACGCTTGTACGGCTCCGCCCAAATGCGTGCCAGCATGTTAATCATGCTTTTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCAGGCAAACGGATCGCGTAAGGCTTCAATCAATAACAGCGCAATCACCGGGCCGAGGCGGCTGAACTGATACTCGTCGCGCACGCCCATCAg                                                                                                                                                              <  2:700585/275‑1 (MQ=255)                                                                                                                       tGAGTCGCTCGGGGGTGCCGCTGGATATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCTTCAATCAATAACAGCGCAATCACCGGGCCGATGCGGCTGAACTGATACTCGTCGCGCACGCCCATCAGCGGTACTCgcgc                                                                                                                                                  <  2:28856/275‑1 (MQ=255)                                                                                                                                                               gCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCTTCAATCAATAACAGCGCAATCACCGGGCCGATGCGGCTGAACTGATACTCGTCGCGCACGCCCATCAGCGGTACTCGCGCCGGTCGCACACCGCTGCATATCCAACGcccgtctcgtat                                                                                                           >  2:129649/1‑264 (MQ=255)                                                                                                                                                                   gTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCTTCAATCAATAACAGCGCAATCACCGGGCCGATGCGGCTGAACTGATACTCGTCGCGCACGCCCATCAGCGGTACTCGCGCAGTTCGCACACCGCTGa                                                                                                                                 <  1:129650/248‑1 (MQ=255)                                                                                                                                                                    tATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCTTCAATCAATAACAGCGCAATCACCggg                                                                                                                                                                                                       >  2:235638/1‑177 (MQ=255)                                                                                                                                                                      ttAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCTTCAATCAATAACAGCGCAATCACCGGGCCGATGCGGCTGAACTGATACTCGTCGCGCACGCCCATCAGCGGTACTCGCGCAGTTCGCACACCCCTGACTTTCAAACGCCACAGCAATTTTGACCAGc                                                                                                   >  1:333331/1‑275 (MQ=255)                                                                                                                                                                        aaaTCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCTTCAATCAATAACAGCGCAATCACCGGGCCGa                                                                                                                                                                                                   <  1:235643/177‑1 (MQ=255)                                                                                                                                                                              gCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCTTCAATCAATAACAGCGCAATCACCGGGCCGATGCGGCTGAACTGATACtcg                                                                                                                                                                               >  2:144430/1‑191 (MQ=255)                                                                                                                                                                               cTTTTCATACAAGCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCACCGATCTTCCGGCGCGCAACCTGATCGCGTAAGGCTTCAATCAATAACATGACAAGCACCGGGCCGATGCGGCTGAACTGATACTCCTCCCCCAAGCCCCACACCGGGAAGCGCCGAGTACGCACACCGCGTACTTGCACACGCCCAAGAACTTTTGCCCAGCCGCAgggc                                                                                           >  2:294504/1‑273 (MQ=255)                                                                                                                                                                                  ttCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCTTCAATCAATAACAGCGCAATCACCGGGCCGATGCGGCTGAACTGATACTCGTcgc                                                                                                                                                                           <  1:144431/191‑1 (MQ=255)                                                                                                                                                                                              gTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCTTCAATCAATAACAGCGCAATCACCGGGCCGATGCGGCTGAACTGATACTCCTcgcg                                                                                                                                                                          >  2:580559/1‑180 (MQ=255)                                                                                                                                                                                                  cGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCTTCAATCAATAACAGCGCAATCACCGGGCCGATGCGGCTGAACTGATACTCGTCGCGCACg                                                                                                                                                                      <  1:580568/180‑1 (MQ=255)                                                                                                                                                                                                   gCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGAcatctccagcggcaccgccgagcgaatcaaatggtggccttccagctcgatatcgtggagattctttttcacggtccgcacatgatcgcgtgctgcgcgctgggcgacgtgcggcagccgctgcaacaccgcgttgtagatccgcgca                                                                                                                               <  1:544399‑M2/218‑149 (MQ=255)                                                                                                                                                                                                   gCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGAcatctccagcggcaccgccgagcgaatcaaatggtggccttccagctcgatatcgtggagattctttttcacggtccgcacatgatcgcgtgct                                                                                                                                                                                     <  2:12132‑M2/164‑95 (MQ=255)                                                                                                                                                                                                       gTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGAcatctccagcggcaccgccgagcgaatcaaatggtggccttccagctcgatatcgtggagattctttttcacggtccgcacatgatcgcgtgctgcgcgctgggcgacgtgcggcagccgctgcaacaccgcgttgtagatccgcgcatgct                                                                                                                           >  2:544390‑M2/1‑66 (MQ=255)                                                                                                                                                                                                       gTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGAcatctccagcggcaccgccgagcgaatcaaatggtggccttccagctcgatatcgtggagattctttttcacggtccgcacatgatcgcgtgctgcgc                                                                                                                                                                                 >  1:12132‑M2/1‑66 (MQ=255)                                                                                                                                                                                                       gTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAg                                                                                                                                                                                                                                     >  1:102447/1‑112 (MQ=255)                                                                                                                                                                                                           ggCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCtt                                                                                                                                                                                                                                 <  2:102446/112‑1 (MQ=255)                                                                                                                                                                                                             cTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGAcatctccagcggcaccgccgagcgaatcaaatggtggccttccagctcgatatcgtggagattctttttcacggtccgcacatgatcgcgtgctgcgcgctgggcgacgtgcggcagccgctgcaacaccgcgttgtagatccg                                                                                                                                   <  2:9338‑M2/204‑145 (MQ=255)                                                                                                                                                                                                             cTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCTtcaatcaa                                                                                                                                                                                                                          >  1:152932/1‑117 (MQ=255)                                                                                                                                                                                                             cTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCTTCAATCAATAACAGCGCAATCACCGGGCCGATGCGGCTGAACTGATACTCGTCGCGCACGCCCATCAGCGGTAc                                                                                                                                                        >  1:289933/1‑183 (MQ=255)                                                                                                                                                                                                             cTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCTTCAATCAATAACAGCGCAATCACCGGGCCGATGCGGCTGAACTGATACTCGTCGCGCACGCCCATCAGCGGTACTCGCGCAGTTCGCACACCGCTGACTTTCAAACGCCACAGCAATTTTGCCCAGCCGAAGGGAAAGAGCGATCCGTTCAGATCGGCAATCGcca                                                            >  1:425803/1‑274 (MQ=255)                                                                                                                                                                                                             cTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCTTCAATCAATAACAGCGCAATCACCGGGCAGATGCGGc                                                                                                                                                                                             >  1:175851/1‑146 (MQ=255)                                                                                                                                                                                                                 gCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGAcatctccagcggcaccgccgagcgaatcaaatggtggccttccagctcgatatcgtggagattctttttcacggtccgcacatgatcgcgtgctgcgcgctgggcgacgtgcggcagccgctgcaacaccgcgttgtagatccgcgca                                                                                                                               >  1:9338‑M2/1‑56 (MQ=255)                                                                                                                                                                                                                 gCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCTTCAATCAATAAc                                                                                                                                                                                                                      <  2:152929/117‑1 (MQ=255)                                                                                                                                                                                                                 gCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCTTCAATCAATAACAGCGCAATCACCGGGCCGATGCGGCTGAACTGATACTCGTCGCGCACGCCCATCAGCGGTACTcgc                                                                                                                                                    <  2:289927/183‑1 (MQ=255)                                                                                                                                                                                                                 gCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCTTCAATCAATAACAGCGCAATCACCGGGCAGATGCGGCTGaa                                                                                                                                                                                         <  2:175848/146‑1 (MQ=255)                                                                                                                                                                                                                            ttCCAGCATGTTATTAATGCCTGTTTTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCAGGCAAACGGATCGCGTAAGGTGTCAATCAATAACAGCGCAATCACCGGGCCGACGCGGCTGAACTGATACTCGTCGCGCACGCCCCTCAGCGGTACTCGCGCAGTTCGCAAACCGCTGACTTTCAAACGCCACAGCAATTTTGCCCAGCCGAAGGGAAAGAGAGATACGTTCAGAACGGAAATCGCAGCTTTGATGTTcttc                                              >  2:614065/1‑271 (MQ=255)                                                                                                                                                                                                                            tccatacctGTAATTCGTGCCCGTATCGGGTGCGCGGATCCATGACCTCTCCATCCCATCGCTCTTCCGGCGGGCAAACGGGTCTCGTCAGGCTTCCAGCACTAACAGCGCACTCACCGGGCCGATGCGGCTGACCTGATACTCTTCGCGCACGCCCATCAGCGGTACTCGCGCAGGTCGCACACCGCGGACTTTCAAACGCCACAGCAATTTTGCCCAGCTGAAGGGAAAGAGCGATCCGTTCAGATCGGCAATCGCCTCGTTGATGTTCGGc                                              <  2:115231/266‑1 (MQ=255)                                                                                                                                                                                                                              ccaacgtGTTATCCATGCCTGTATTGCTTTCGACGATCCATGCAATCTCCCGCGCATCGAGCTGCCGGCGGGCAAACGGATCGCGTAAGGCTTCAATCAATAACAGCGCAATCACCGGGCCGATGCGGCTGAACTGATACTCGTCGCGCACGCCCATCAGCGGTACTCGCGCAGTTCGCACACCGCTGACTTTCAAACGCCACAGCAATTTTGCCCAGCCGAAGGGAAAGAGCGATCCGTTCAGATCGGCAATCGCCTCGTTGATGTTCGGCAAg                                           <  2:236930/269‑1 (MQ=255)                                                                                                                                                                                                                               ccgaaTGTTATTCATGCCTGTATGTGTGTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCTTCAATCAATAACAGCGCAATCCCCGTGCCGATGCGGCTGAACTGATACTCGTCGCGCACGCCCATCAGCGGTACTCGCGCAGTTCGCACACCGCTGACTTTCAAACGCCACAGCAATTTTGCCCAGCCGAAGGGAAAGAGCGATCCGTTCAGATCGGCAATCGCCTCGTTGATGTTCGGCAAGc                                          <  2:231835/271‑1 (MQ=255)                                                                                                                                                                                                                                      ttATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCTTCAATCAATAACAGCGCAATCACCGGGCCGATGCGGCTGAACTGATACTCGTCGCGCACGCCCATCAGCGGTACTCGCGCAGTTCGCACACCGCTGACTTTCAAACGCCACAGCAATTTTGCCCAGCCGAAGGGAAAGAGCGATCCGTTCAGATCGGCAATCGCCTCGTTGATGTTCGGc                                              >  1:231840/1‑264 (MQ=255)                                                                                                                                                                                                                                       tATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCTTCAATCAATAAc                                                                                                                                                                                                                      >  2:721698/1‑95 (MQ=255)                                                                                                                                                                                                                                          tCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCTTCAATCAATAACAGCGCAATCACCGGGCCGATGCGGCTGAACTGATACTCGTCGCGCACGCCCATCAGCTGTACTCGCGCAGTTCGCACACCGCTGACTTTCAAACGCCACAGCAATTTTGCCCAGCCGAAGGGAAAGAGCGATCCGTTCAGATCGGCAATCGCCTCGTTGATGTACGGCAAGCCGACAATAAAc                               >  1:586286/1‑275 (MQ=255)                                                                                                                                                                                                                                           cATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCTTCAATCAATAACAgcg                                                                                                                                                                                                                  <  1:721708/95‑1 (MQ=255)                                                                                                                                                                                                                                              gCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCTTCAATCAATAACAGCGCAATCACCGGGCCGATGCGGCTGAACTGATACTCGTCGCGCACGCCCATCAGCGGTACTCGCGCAGTTCGCACACCGCTGACTTTCAAACGCCACAGCAATTTTGCCCAGCCGAAGGGAAAGAGCGATCCGTTCAGATCGGCAATCGCCTCGTTGATGTTCGGCAAGCCGACAATAAACgcgc                           >  1:252357/1‑275 (MQ=255)                                                                                                                                                                                                                                              gCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCTTCAATCAATAACAGCGCAATCACCGGGCCGATGCGGCTGAACTGATACTCGTCGCGCACGCCCATCAGCGGTACTCGCGCAGTTCGCACACCGCTGACTTTCAAACGCCACAGCAATTTTGCCCAGCCGAAGGGAAAGAGCGATCCGTTCAGATCGGCAATCGCCTCGTTGATGTTCGGCAAGCCGACAATAAACgcgc                           >  1:73551/1‑275 (MQ=255)                                                                                                                                                                                                                                               ccTGTTTTGGTTTCTAGGTTCCATGACATCTCCAGCTCTTCGAGCTTCCGGCGGGCAACCGGATCGCGTAAGGCTTCAATAAATACCAGCGCAATCACCGGGCCGATGCGGCTGAACTGATACTCGTCGCGCACGCCCATCAGCGGTACTCGCGCAGTTCGCACACCGCTGACTTTCAAACGCCACAGCAATTTTGCCCAGCCGAAGGGAAAGAGCGATCCGTTCAGATCGGCAATCGCCTCGTTGATGTTCGGCAAGCCGACAATAAACGCGCa                          <  1:346190/275‑1 (MQ=255)                                                                                                                                                                                                                                               ccTGTATTGGTTTCGAGGCTCCATGACATCTCCAGCGCATCGAGCTTCCGGCGGGCAAACGGATCGCCTAAGGCTTCAATCAATAACAGCGCAATCACCGGGCCGATGCGGCTGAACTGATANTCGTCGCGCACGCCCATCAGCGGTACTCGCGCAGTTCGCACACCGCTGACTTTCAAACGCCACAGCAATTTTGCCCAGCCGAAGGGAAAGAGCGATCCGTTCAGATCGGCAATCGCCTCGTTGATGTTCGGCAAGCCGACAATAAACGCGCa                          <  1:614074/275‑1 (MQ=255)                                                                                                                                                                                                                                                cTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCTTCAATCAATAACAGCGCAATCACCGGGCCGATGCGGCTGAACTGATACTCGTCGCGCACGCCCATCAGCGGTACTCGCGCAGTTCGCACACCGCTGACTTTCAAACGCCCACGCAATTTTGCCCATCCGATAGGAAAGACCGATCCGTTCAGAACGGAAATCGCCTCGTTGCCGTTCGGCAAGCCGAAAACCAACacgcc                          >  2:676090/1‑273 (MQ=255)                                                                                                                                                                                                                                                   tATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCTGCGGGCAAACGGATCGCGTAAGGCTTCAATCAATAACAGCGCAATCACCGGGCCGATGCGGCTGAACTGATACTCGTCGCGCACGCCCATCAGCGGTACTCGCGCAGTTCGCACACCGCTGACTTTCAAACGCCACAGCAATTTTGCCCAGCCGAAGGGAAAGAGCGATCCGTTCAGATCGGCAATCGCCTCGTTGATGTTCGGCAAGCCGAAAATAAACGCGCAagga                      >  1:163422/1‑274 (MQ=255)                                                                                                                                                                                                                                                   tATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCTTCAATCAATAACAGCGCAATCACCggg                                                                                                                                                                                                       >  1:552776/1‑98 (MQ=255)                                                                                                                                                                                                                                                   tATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCTTCAATCAATAACAGCGCAATCACCGGGCCGATGCGGCTGAACTGATACTCGTCGCGCACGCCCATCAGCGGTACTCGCGCAGTTCGAACACCGCTGACTTTCAAACGCCACAGCACTTTTGCCCAGCCGAAGGGAAAGAGCGATCCGATCAGATCGGCAATCGCCTCGTTCAAGTTCGGCAAGCCGACAATAAACGCGCAg                         >  1:325454/1‑272 (MQ=255)                                                                                                                                                                                                                                                     tggggtgcGAGGATCCAGTACATCTCCAGCGCATCGATCTTCCGGCGGGAAAACGGCTCGCGTAAGGCTTCAATCAATAACAGCGCAAGCACCGGGCCGATGCGGCTGAACTGATACTCGTCGCGCACGCCCATCAGCGGTACTCGCGCAGTTCGCACACCGCTGACTTTCAAACGCCACAGCAATTTTGCCCAGCCGAAGGGAAAGAGCGATCCGTTCAGATCGGCAATCGCCTCGTTGATGTTCGGCAAGCCGACAATAAACGCGCAGGGTg                     <  2:252352/267‑1 (MQ=255)                                                                                                                                                                                                                                                       ggTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCTTCAATCAATAACAGCGCAATCACCGGGCCGa                                                                                                                                                                                                   <  2:552767/98‑1 (MQ=255)                                                                                                                                                                                                                                                        gTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAg                                                                                                                                                                                                                                     >  2:680034/1‑63 (MQ=255)                                                                                                                                                                                                                                                           tCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCTTCAATCAATAACAGCGCAATCACCGGGCCGATGCGGCTGAACTGATACTCGTCGCGCACGCCCATCAGCGGTACTCGCGCAGTTCGCACACCGCTGACTTTCAAAAGCCAAAGCAATTTTGCCCAGCCGAAGGGAAAGAGCGCTCCGTTCAGCACGGCAATCACCTCGTTGATGTTCGGACAGCCGACAATAAACGCACAGGATGCAGaat               >  1:228017/1‑274 (MQ=255)                                                                                                                                                                                                                                                            cGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCtt                                                                                                                                                                                                                                 <  1:680043/63‑1 (MQ=255)                                                                                                                                                                                                                                                              aGGATCCATGACATCTCCAGCGAATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCTTCAATCAATAACAGCGCAATCACCGGGCCGATGCGGCTGAACTGATACTCGTCGCGCACGCCCATCAGCGGTACTCGCGCAGTTCGCACACCGCTGACTTTCAAACGCCACAGCAATTTTGCCCAGCCGAAGGGAAAGAGCGATCCGTTCAGATCGGCAATCGCCTCGTTGATGTTCGGCAAGCCGACAATAAACGCGCAGGGTGCAGaatcaat           <  1:375667/275‑1 (MQ=255)                                                                                                                                                                                                                                                                   ccATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCTTCAATCAATAACAGCGCAATCACCTGGCCGATGCGGCTGAACTGATACTCGTCGCGCACGCCCATCAGCGGTACTCGCGCAGTTCGCACACCGCTGACTTTCAAACGCCACAGCAATTTTGCCCAGCCGAAGGGAAAGAGCGATCCGTTCAGATCGGCAATCGCCTCGTTGATGTTCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAg      <  1:676099/275‑1 (MQ=255)                                                                                                                                                                                                                                                                   ccATGACATCANAAGCGCATCGCTCTTCCGGCGGGCAAACGGATCGCTTAAGTCTTCAATCAATACCCGGCCAATCACCGGGCCGAGCTGGCTGAACTGATCCGCGGCGCGCACGCCCATCAGCTGTATTCGCGCAGTTCGCACACCGCTGACTTTCAAAGTCCACAGCAATTTTGCCCAGCCGAAGGGAAAGAGCGATCCGTTCAGATCGGCAATCGCCTCGTTGATGTTCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAg      <  2:73550/275‑1 (MQ=255)                                                                                                                                                                                                                                                                        aCATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCTTCAATCAATAACAGCGCAATCACCGGGCCGATGCGGCTGAACTGATACTCGTCGCGCACGCCCATCAGCGGTACTCGCGCAGTTCGCACACCGCTGACTTTCAAACGCCACAGCAATTTTGCCCAGCCGAAGGGAAAGAGCGATCCGTTCAGATCGGCAATCGCCTCGTTGATGTTCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGat  <  1:9215/274‑1 (MQ=255)                                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                                                  GCGCGGATCTACAACGCGGTGTTGCAGCGGCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCTTCAATCAATAACAGCGCAATCACCGGGCCGATGCGGCTGAACTGATACTCGTCGCGCACGCCCATCAGCGGTACTCGCGCAGTTCGCACACCGCTGACTTTCAAACGCCACAGCAATTTTGCCCAGCCGAAGGGAAAGAGCGATCCGTTCAGATCGGCAATCGCCTCGTTGATGTTCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGAT  >  CP009273/3122237‑3122773

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.