New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	3316282 =	40 (1.040)	7 (0.190)	5/300	NT	16.2%	coding (1148/1338 nt)	glmM	phosphoglucosamine mutase
	?	CP009273	3316507 =	34 (0.930)					coding (923/1338 nt)	glmM	phosphoglucosamine mutase

CGGAAAAAAAC‑AGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTGCGCTTCGTCTTCGCCTTCCACCATCACGCGAATTAACGGTTCGGTGCCGGATTTACGCAGCAACACGCG‑TCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGTTTTATCCAGCAGGATCACATGACCGGAATTCTCTGCACCGATACGCCAGCCTTTCTCCTGCATTTTTTCCAGTACGTAGCGGTCACCCACTTTCGCGCGCGCAAATGGAATTCCTAACTGTTTCAG  >  CP009273/3316012‑3316550                                                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                                             cGGAAAAAAAC‑AGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCGAGTTATCTAACGCTTTAAACGGCTTTTACTGGATCGGCGATGCGGTGTGCAAATTCAGTCACCTGCGCTTCGTCTTCGCCTTCCACCATCACGCGAATTAACGGTTCGGTGCCGGATTTACGCAGCAACACGCG‑TCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCt                                                                                                                                                                                                                                                                          <  1:398976/275‑1 (MQ=255)   gAAAAAAAC‑AGCAAAACCTATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGTCGATGCGGTGTGCAAATTCAGNCACCTGCGCTTCGTCTTCGCCTTCCACCATCACGCGAATTAACGGTTCGGTGCCGGATTTACGCAGCAACACGCG‑TCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTAc                                                                                                                                                                                                                                                                        <  1:604533/275‑1 (MQ=255)       aaaaCAAGCAGAACCGATGTATTCGCTGGAAAAAAAGGCGACATGTGGCGCGTTTTTATGCAGTTATCTAACGCTTTAAACGGCTTTTACGTAGCCGGCGATGCGGTGTGCAAATTCAGTCACCTGCGCTTCGTCTTCGCCTTCCACCAGCCCGCGAATTAACGGTTCGGTGCCGGATTTACGCAGCAACACGCG‑TCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTg                                                                                                                                                                                                                                                                     <  2:128923/275‑1 (MQ=255)          aC‑AGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTGCGCTTCGTCTTCGCCTTCCACCATCACGCGAATTAACGGTTCGGTGCCGGATTTACGCAGCAACACGCG‑TCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGgt                                                                                                                                                                                                                                                                 <  1:2835/275‑1 (MQ=255)                            ttCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTTCATCGGCGATGCGGTGTGCAAATTCAGTCACCTGCGCATCGTCTTCGCCTTCCACCATCACGCGAATTAACGGTTCGGTGCCGGATCTACGCAGCAACACGCG‑TCCACGGTTGCCCTGCGCAGCTTCAACCTCTCCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGCTCGCCGCTACCTGCGGTGTAACGTACGTTAAccc                                                                                                                                                                                                                                                >  1:671995/1‑274 (MQ=255)                                         aaGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAGTTCAGTCACCTGCGCTTCGTCTTCGCCTTCCACCATCACGCGCATTAACGGTTCTGTGCCGGATTTACGCAGCAACACGCG‑TCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGaa                                                                                                                                                                                                                                   <  1:684205/275‑1 (MQ=255)                                                    tgccgccTTTTTAGCCAGTTATCTAACTCTTTTAACGGC‑TTTACTGCATCGGCGATACGGTGTGCAAATTCAGTCTCCTGCGCTTCGTCTTCGCCTTCCACCATCACGCGAATTAGCGGTTCGGTGCCGGATTTACGCAGCAACACGCG‑TCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGcc                                                                                                                                                                                                                       <  1:222182/274‑1 (MQ=255)                                                                    aGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTGCGCTTCGTCTTCGCCTTCCACCATCACGCGAATTAACGGTTCGGTGCCGGATTTACGCAGCAACACGCG‑TCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTg                                                                                                                                                                                                        <  1:707233/275‑1 (MQ=255)                                                                     gTTATATAACGATGTAAAAGGCGTTTACTTCATCGGCGATGCGTGGTGAAAATTCTGGCACCTGCGCTGTGGCTTCTCCTTCCACCAGCACGCGAAGTAACGGTTCGGTGCCGGAGTTACGCAGCAACACGCG‑TCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCCTGCTCAAGTGGATCGCCGCGACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTg                                                                                                                                                                                                        <  2:615200/274‑1 (MQ=255)                                                                      ttATCTAACGCTTTAAACTGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTGCGCTTCGTCTTCGCCTTCCACCATCACGCGAATTAACGGTTCGGTGCCGGATTTACGCAGCAACACGCG‑TCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCa                                                                                                                                                                                                      <  1:30762/275‑1 (MQ=255)                                                                       tATTTAACGCTGTAAACGTCTTTGATTTCCTCGGCGATGCGGTTTTCAAATTCAGTCACCTGCGCTTCGTCTTCGCCTTCCACCATCCCGCGAATTAACGGTTCGGTGCCGGATTTACGCAGCAACACGCG‑TCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCa                                                                                                                                                                                                      <  2:637183/274‑1 (MQ=255)                                                                                cTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTGCGCTTCGTCTTCGCCTTCCACCATCACGCGAATTAACGGTTCGGTGCCGGATTTACGCAGCAACACGCG‑TCCACGGTTGCCCAGCGCAGCTTCAACCGCTGCGGTCACGGCTTTAACTGACCCATGCTCAAGTGGAGCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCACTGCAAAGGTCGTGAAGGCACatat                                                                                                                                                                                             >  1:588240/1‑274 (MQ=255)                                                                                   tAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTGCGCTTCGTCTTCGCCTTCCACCATCACGCGAATTAACGGTTCGGTGCCGGATTTACGCAGCAACACGCG‑TCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATcgc                                                                                                                                                                                                                                                                              >  2:20355/1‑190 (MQ=255)                                                                                       cGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTGCGCTTCGTCTTCGCCTTCCACCATCACGCGAATTAACGGTTCGGTGCCGGATTTACGCAGCAACACGCG‑TCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCt                                                                                                                                                                                                                                                                          <  1:20355/190‑1 (MQ=255)                                                                                                                   tgCAAATTCAGTCACCTGCGCTTCGTCTTCGCCTTCCACCATCACGCGAATTAACGGTTCGGTGCCGGATTTACGCAGCAACACGCG‑TCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATcgccg                                                                                                                                                                                                                                                                            >  1:411308/1‑160 (MQ=255)                                                                                                                       aaTTCAGTCACCTGCGCTTCGTCTTCGCCTTCCACCATCACGCGAATTAACGGTTCGGTGCCGGATTTACGCAGCAACACGCG‑TCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGACGCTAc                                                                                                                                                                                                                                                                        <  2:411301/160‑1 (MQ=255)                                                                                                                            ggcgatcagatcatgtatatcatcgcgcgtgaaggtcttcgtcagggccagctgcgtggtggcgctgtgggtacattgatgagcaacatggggcttgaactggcgctgaaacagttaggaattccatttgcgcgcgcgaaagtgggtgaCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTCCAAGCCCGCAACGATg                                                                                                                                                 <  1:58237‑M1/126‑1 (MQ=255)                                                                                                                                  cTGCGCTTCGTCTTCGCCTTCCACCGTCACGCGAATTAACGGTTCGGTGCCGGATGTACGCAGCAACACGCG‑TCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCAc                                                                                                                                          <  1:449508/275‑1 (MQ=255)                                                                                                                                       cTTCGTCTTCGCCTTCCACCATCACGCGAATTAACGGTTCGGTGCCGGATTTACGCAGCAACACGCG‑TCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGNCTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCAc                                                                                                                                          <  1:611331/270‑1 (MQ=255)                                                                                                                                                cGCCTTCCACCATCACGCGAATTAACGGTTCGGTACCGGATTTACGCAGCAACACGCG‑TCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGTTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTa                                                                                                                                                                                                                                                                         >  2:345589/1‑134 (MQ=255)                                                                                                                                                   cgcgcgtgaaggtcttcgtcagggccagctgcgtggtggcgctgtgggtacattgatgagcaacatggggcttgaactggcgctgaaacagttaggaattccatttgcgcgcgcgaaagtgggtgac                                                                                                                                                                                                                                                                              <  1:9805‑M1/1‑1 (MQ=255)                                                                                                                                                    ttCCACCATCACGCGAATTAACGGTTCGGTACCGGATTTACGCAGCAACACGCG‑TCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGTTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTg                                                                                                                                                                                                                                                                     <  1:345595/134‑1 (MQ=255)                                                                                                                                                    tgcaaacaccccgcgATTTAACGGGTCGGGGCCGGGTTTCACCAGCAAC‑CGTGTTCCCCGGTTTCCCGGCGTCGCTTCAAACTCGGCGGTCACGGCTTGAACGGACTCACGTGCAAGTGGATGGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTGCATGCCGCTGCAAATGTCGTGCAGGCTCATATGGTTACGGGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGTTTTATcc                                                                                                                         <  2:671986/263‑1 (MQ=255)                                                                                                                                                       cgtgaaggtcttcgtcagggccagctgcgtggtggcgctgtgggtacattgatgagcaacatggggcttgaactggcgctgaaacagttaggaattccatttgcgcgcgcgaaagtgggtgaCCGCt                                                                                                                                                                                                                                                                          >  2:9805‑M1/123‑127 (MQ=255)                                                                                                                                                             cACGCGAATTAACGGTTCGGTGCCGGATTTACGCAGCAACACGCG‑TCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGt                                                                                                                                                                                                            >  2:256844/1‑182 (MQ=255)                                                                                                                                                              aCGCGGATTAACGGTTCGTTGCCGGATTTACGCAGCAACACGCG‑TCAACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGTTTTATCCAGCAGGATcac                                                                                                              <  1:116403/275‑1 (MQ=255)                                                                                                                                                               cgcgAATTAACGGTTCGGTGCCGGATTTACGCAGCAACACGCG‑TCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGc                                                                                                                                                                                                                     >  2:43581/1‑171 (MQ=255)                                                                                                                                                                gcgAATTAACGGTTCGGTGCCGGATTTACGCAGCAACACGCG‑TCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATAGACGCCAGCACCTACAAGCCCGCAACGATGCCGGCACCGGGAGGAGGTTTATCTANAAGGATgaccg                                                                                                            >  2:69837/1‑273 (MQ=255)                                                                                                                                                                 cgAATTAACGGTTCGGTGCCGGATTTACGCAGCAACACGCG‑TCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTg                                                                                                                                                                                                        <  1:256849/182‑1 (MQ=255)                                                                                                                                                                   aaTTAACGGTTCGGTGCCGGATTTACGCAGCAACACGCG‑TCCACGGTTGCCNAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATAAGGTTACGTGCCATCGGCGCCAGCACCTGCAAGCCAGCAACGATg                                                                                                                                                 <  1:529674/235‑1 (MQ=255)                                                                                                                                                                   aaTTAACGGTTCGGTGCCGGATTTACGCAGCAACACGCG‑TCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCa                                                                                                                                                                                                                 <  1:43581/171‑1 (MQ=255)                                                                                                                                                                       aaCGGTTCGGTGCCGGATTTACGCAGCAACACGCG‑TCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGGACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCAGTCACCGGTAGGCGTTTTATCCCGCAGGCTCACCTTAccag                                                                                                      >  2:207907/1‑272 (MQ=255)                                                                                                                                                                         ggccagctgcgtggtggcgctgtgggtacattgatgagcaacatggggcttgaactggcgctgaaacagttaggaattccatttgcgcgcgcgaaagtgggtgaCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCGAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGTTTTATCCAGCAGGATCACATGACCGGaa                                                                                                    <  1:590387‑M1/171‑1 (MQ=255)                                                                                                                                                                          ggTTCGGTGCCGGATTTACGCAGCAACACGCG‑TCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTa                                                                                                                                                                                                                                                              >  2:181882/1‑119 (MQ=255)                                                                                                                                                                              cGGTGCCGGATTTACGCAGCAACACGCG‑TCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAacgt                                                                                                                                                                                                                                                          <  1:181885/119‑1 (MQ=255)                                                                                                                                                                              cGGTGCCGGATTTACGCAGCAACACGCG‑TCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTNACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGGAGTTTTATCCAGCAGGACCACATGCCCGGAAATctct                                                                                              >  1:514619/1‑275 (MQ=255)                                                                                                                                                                                     ggATTTACGCAGCAACCCGCG‑GCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGTTTTATCCAGCAGGATCACATGACCGGAATTCTCTGCACCGa                                                                                       <  1:207911/275‑1 (MQ=255)                                                                                                                                                                                           aCGCAGCAACTCGCG‑TCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCTCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTNCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGTTTTATCCAGCAGGATCACATGACCGGAATTCTCTGCACCGATACGcc                                                                                 <  1:605978/275‑1 (MQ=255)                                                                                                                                                                                                   tacattgatgagcaacatggggcttgaactggcgctgaaacagttaggaattccatttgcgcgcgcgaaagtgggtgaCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGTTTTATCCAGCAGGATCACATGACCGGAATTCTCTGCACCGATACGCCAGCCtt                                                                           <  1:189548‑M1/196‑1 (MQ=255)                                                                                                                                                                                                               ctccatggggcttgacctggcgctgaaacagttaggaattccttttgcgcgcgcgaaagtgggtgaCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGTTTTATCCAGCAGGATCACATGACCGGAATTCTCTGCACCGATACGCCAGCCTTTCTCCTGCAttt                                                               >  2:189545‑M1/67‑274 (MQ=255)                                                                                                                                                                                                                aacgtggggcttgtactggcgctgaaacagttaggaattccatgtgcgcgcgcgaaagtgggggaCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCTGTAGTAGTTTTATCCAGCAGGATCACATGACCGGAATTCTCTGCACCGATACGCCAGCCTTTCTCCTGCAtttt                                                              >  1:397715‑M1/66‑274 (MQ=255)                                                                                                                                                                                                                aaacgggggcncaaaatggcgctgaaacagttaggaattccatttgcgcgcgcgaaagtgggtgaCCGTTACCTGCGGGGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGGGCAGGCTCATAGGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGTTTTATCCAGCAGGATCACATGACCGGAATTCTCTGCACCGATACGCCAGCCTTTCTCCTGCAtttt                                                              >  2:58236‑M1/66‑274 (MQ=255)                                                                                                                                                                                                                aaaagggggatggtactggcgctgaaacagttaggaattccatttgcgcgcgcgaaagtgggtgaCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGTTTTATCCAGCAGGATCACATGACCGGAATTCTCTGCACCGATACGCCAGCCTTTCTCCTGCAtttt                                                              >  2:590378‑M1/66‑274 (MQ=255)                                                                                                                                                                                                                 acatggggcttgaactggcgctgaaacagttaggaattccatttgcgcgcgcgaaagtgggtgac                                                                                                                                                                                                                                                                              >  2:437821‑M1/65‑65 (MQ=255)                                                                                                                                                                                                                  ttGCCAAGCCCAANNTCAACCTCTGAGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGGGTAACGTACGTTAACCAGAATCTGCGGGAACATTTGCAGGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGTTTTATCCAGCAGGATCACATGACCGGAATTCTCTGCACCGATACGCCAGCCTTTCTCCTGCATTTTTTc                                                           <  2:514612/275‑1 (MQ=255)                                                                                                                                                                                                                     cccAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGATAGTAGTTTTATCCAGCAGGATCACATGACCGGAATTCTCTGCACCGATACGCCAGCCTTTCTCCTgtcccttaaacac                                                        >  1:714625/1‑263 (MQ=255)                                                                                                                                                                                                                         gcgcAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGTTTTATCCAGCAGGATCACATGACCGGAATTCTCTGCACCGATACGc                                                                                  <  2:714615/245‑1 (MQ=255)                                                                                                                                                                                                                          cgcAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGTTTTATCCAGCAGGATc                                                                                                                >  1:10192/1‑214 (MQ=255)                                                                                                                                                                                                                              gCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGTTTTATCCAGCAGGATCACAt                                                                                                            <  2:10192/214‑1 (MQ=255)                                                                                                                                                                                                                                                   gCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGATCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCATCa                                                                                                                                                                     >  2:712057/1‑136 (MQ=255)                                                                                                                                                                                                                                                       tAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCTCCAGCACCTg                                                                                                                                                                 <  1:712067/136‑1 (MQ=255)                                                                                                                                                                                                                                                          cTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCNTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGTTTTATCCAGCAGGATCACATGACCGGAATTCTCTGCACCGATACGCCAGCCTTTCTCCTGCATTTTTTCCAGTACGTAGCCGTCACCCACTTTCCCGCGCGCAAATGGa                   <  1:533306/275‑1 (MQ=255)                                                                                                                                                                                                                                                            gACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCatat                                                                                                                                                                                             >  2:265066/1‑103 (MQ=255)                                                                                                                                                                                                                                                                cATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGtt                                                                                                                                                                                         <  1:265071/103‑1 (MQ=255)                                                                                                                                                                                                                                                                            gATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGTTTTATCCAGCAGGATCACATGAc                                                                                                         >  1:158186/1‑171 (MQ=255)                                                                                                                                                                                                                                                                             aTCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGTTTTATCCAGCAGGATCAAATGCCCGGAATTCTCTGCACCGATCCGCCAGCCTTTCTCCTGCATTTTTTCCCGTACGTAGCGGTCACCCACTTTCGCGCGCTNCAATGGACTTCCTCACtttattta  >  2:461864/1‑266 (MQ=255)                                                                                                                                                                                                                                                                                gccgcTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGTTTTATCCAGCAGGATCACATGACCGGa                                                                                                     <  2:158183/171‑1 (MQ=255)                                                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                                             CGGAAAAAAAC‑AGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTGCGCTTCGTCTTCGCCTTCCACCATCACGCGAATTAACGGTTCGGTGCCGGATTTACGCAGCAACACGCG‑TCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGTTTTATCCAGCAGGATCACATGACCGGAATTCTCTGCACCGATACGCCAGCCTTTCTCCTGCATTTTTTCCAGTACGTAGCGGTCACCCACTTTCGCGCGCGCAAATGGAATTCCTAACTGTTTCAG  >  CP009273/3316012‑3316550

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.