New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	3316282 =	40 (1.040)	7 (0.190)	5/300	NT	16.2%	coding (1148/1338 nt)	glmM	phosphoglucosamine mutase
	?	CP009273	3316507 =	34 (0.930)					coding (923/1338 nt)	glmM	phosphoglucosamine mutase

CTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGTTTTATCCAGCAGGATCACATGACCGGAATTCTCTGCACCGATACGCCAGCCTTTCTCCTGCATTTTTTCCAGTACGTAGCGGTCACCCACTTTCGCGCGCGCAAATGGAATTCCTAACTGTTTCAGCGCCAGTTCAAGCCCCATGTTGCTCATCAATGTACCCACAGCGCCACCACGCAGCTGGCCCTGACGAAGACCTTCACGCGCGATGATATACATGATCTGATCGCCATCGACTTTATTGCCTTCATGGTCAACCATAATCACGCGATCGCCATCGCCGTCGAAGGCAATACCGAGATCCGCTTTTTCAGCCAGCACACGAGCCTGGAGCGCGCGAACGTCGG  >  CP009273/3316259‑3316771                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                                         cTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCNTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGTTTTATCCAGCAGGATCACATGACCGGAATTCTCTGCACCGATACGCCAGCCTTTCTCCTGCATTTTTTCCAGTACGTAGCCGTCACCCACTTTCCCGCGCGCAAATGGa                                                                                                                                                                                                                                                <  1:533306/275‑1 (MQ=255)                    aTCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGTTTTATCCAGCAGGATCAAATGCCCGGAATTCTCTGCACCGATCCGCCAGCCTTTCTCCTGCATTTTTTCCCGTACGTAGCGGTCACCCACTTTCGCGCGCTNCAATGGACTTCCTCACtttattta                                                                                                                                                                                                                               >  2:461864/1‑266 (MQ=255)                           tTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGTGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGTTTTATCCAGCAGGATCACATGACCGGAATTCTCTGCACCGATACGCCAGCCTTTCTCCTGCATTTTTTCCAGTACGTAGCGGTCACCCACTTTCGCGCGCGCAAATGGAATTCCTAACTGTTTCAGCGCCAGTTc                                                                                                                                                                                                                      >  1:69838‑M1/2‑275 (MQ=255)                                tGCGGTGTAACGTACGTTAACTAGATTCTTCGGTAACATTCTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGTTTTATCCAGCAGGATCACATGACCGGAATTCTCTGCACCGATACGCCAGCCTTTCTCCTGCATTTTTTCCAGTACGTAGCGGTCACCAACTTTCGCGCGCGCAAATGGAATTCCTAACTGTTTCAGCGCCAGTTCAAGcc                                                                                                                                                                                                                 <  1:187918/275‑1 (MQ=255)                                        aaaatgcaggagaaaggctggcgtatcggtgcagagaattccggtcatgtgatcctgctggataaaactactaccggtgacggcatcgttgctggcttgcaggtgctggcggcgatggcacgtaaccctatgagcctgcccgacctttgcagcggcatgaaaatgttcccgcagattctggttaacgtacgttaccccgcaggtaacggTCACCCACTTTCGCGCGCGCAAATGGAATTCCTAACTGTTTCAGCGCCATTttgngcccccgttt                                                                                                                                                                                                          >  2:58236‑M2/210‑269 (MQ=255)                                        aaaatgcaggagaaaggctggcgtatcggtgcagagaattccggtcatgtgatcctgctggataaaactactaccggtgacggcatcgttgctggcttgcaggtgctggcggcgatggcacgtaaccatatgagcctgcacgacctttgcagcggcatgaaaatgttcccgcagattctggttaacgtacgttacaccgcaggtagcggTCACCCACTTTCGCGCGCGCAAATGGAATTCCTAACTGTTTCAGCGCCAGTaccatccccctttt                                                                                                                                                                                                          >  2:590378‑M2/210‑269 (MQ=255)                                        aaaatgcaggagaaaggctggcgtatcggtgcagagaattccggtcatgtgatcctgctggataaaactactacaggtgacggcatcgttgctggcttgcaggtgctggcggcgatggcacgtaaccatatgagcctgcacgacctttgcagcggcatgaaaatgttcccgcagattctggttaacgtacgttacaccgcaggtagcggTCCCCCACTTTCGCGCGCGCACATGGAATTCCTAACTGTTTCAGCGCCAGTACAAGCCCCACGtt                                                                                                                                                                                                          >  1:397715‑M2/210‑274 (MQ=255)                                         aaatgcaggagaaaggctggcgtatcggtgcagagaattccggtcatgtgatcctgctggataaaactactaccggtgacggcatcgttgctggcttgcaggtgctggcggcgatggcacgtaaccatatgagcctgcacgacctttgcagcggcatgaaaatgttcccgcagattctggttaacgtacgttacaccgcaggtagcggTCACCCACTTTCGCGCGCGCAAAAGGAATTCCTAACTGTTTCAGCGCCAGGTCAAGCCCcatggag                                                                                                                                                                                                         >  2:189545‑M2/209‑271 (MQ=255)                                            tccgtTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTTGTGCAGGCTCATATGGTTACGTTCCATCGCCGCCNGCACCTGCNAGCCAGCAACGAAGCCGTCACCGGTAGTAGTTTTATCCAGCAGGATCACATGACCGGAATTCTCTGCACCGATACGCCAGCCTTTCTCCTGCATTTTTTCCAGTACGTAGCGGTCACCCACTTTCGCGCGCGCAAATGGAATTCCTAACTGTTTCACCGCCAGTTCAAGCCCCATGTTGCtca                                                                                                                                                                                                     <  1:461871/273‑1 (MQ=255)                                                 tAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCCAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGTTTTATCCAGCAGGATCACATTACCGGAATTCTCTGCCCCGATAAGCCAGCCTTTCTCCTGCATTTTTTCCAGTACGTAGCGGTCACCCCCTTTCGCTCTCCCAACTTGAATTCCTAACCGCTTCACCGCCCGTTCAACCCCCATGTTGCCCATCaa                                                                                                                                                                                                 >  1:103258/1‑274 (MQ=255)                                                     aaggctggcgtatcggtgcagagaattccggtcatgtgatcctgctggataaaactactaccggtgacggcatcgttgctggcttgcaggtgctggcggcgatggcacgtaaccatatgagcctgcacgacctttgcagcggcatgaaaatgttcccgcagattctggttaacgtacgttacaccgcaggtagcggTCACCCACTTTCGCGCGCGCAAATGGAATTCCTAACTGTTTCAGCGCCAGTTCAAGCCCCATGTTGCTCATCAATGTa                                                                                                                                                                                             <  1:189548‑M2/78‑1 (MQ=255)                                                                  aaCATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGTTTTATCCAGCAGGATCACATGACCGGAATTCTCTGCACCGATACGCCAGCCTTTCTCCTGCATTTTTTCCAGTACGTAGCGGTCACCCACTTTCGCGCGCGCaaa                                                                                                                                                                                                                                                    >  2:106740/1‑206 (MQ=255)                                                                      ttttCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGTTTTATCCAGCAGGATCACATGACCGGAATTCTCTGCACCGATACGCCAGCCTTTCTCCTGCATTTTTTCCAGTACGTAGCGGTCACCCACTTTCGCGCGCGCAAATGGa                                                                                                                                                                                                                                                <  1:106741/206‑1 (MQ=255)                                                                              ttccggtcatgtgatcctgctggataaaactactaccggtgacggcatcgttgctggcttgcaggtgctggcggcgatggcacgtaaccatatgagcctgcacgaccttcgcagcggcatgaaaatgttcccgcagattctggttaacgtacgttacaccgcaggtagcggTCACCCACTTTCGCGCGCGCAAATGGAATTCCTAACTGTTTCAGCGCCAGTTCAAGCCCCATGTTGCTCATCAATGTACCCACAGCGCCACCACGCAGCTGGcc                                                                                                                                                                   <  1:590387‑M2/104‑1 (MQ=255)                                                                                         gTCGTGCAGGCTCATATGGGTACGAGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGTTTTATCCAGCAGGATCACATGACCGGAATTCTCTGCACCGATACGCCAGCCTTTCTCCTGCATTTTTTCCAGTACGTAGCGGTCACCCACTTTCGCGCGCGCAAATGGAATTc                                                                                                                                                                                                                                            >  2:107938/1‑191 (MQ=255)                                                                                             tGCAGGCTCATATGGTTACGAGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGTTTTATCCAGCAGGATCACATGACCGGAATTCTCTGCACCGATACGCCAGCCTTTCTCCTGCATTTTTTCCAGTACGTAGCGGTCACCCACTTTCGCGCGCGCAAATGGAATTCCTaa                                                                                                                                                                                                                                        <  1:107939/191‑1 (MQ=255)                                                                                                   cttatatTGTTACGTGCCATCTCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGTTTTATCCAGCAGGATCACATGACCGGAATTCTCTGTACCGATACGCCAGCCTTTCTCCTGCATTTTTTCCAGTACGTAGCGGTCACCCACTTTCGCGCGCGCAAATGGAATTCCTAACTGTTTCAGCGCCAGTTCAAGCCCCATGTTGCTCATCAATGTACCCACAGCGCCACCACGCAGCTGGCCCTGACGAAGACCTTCAcgcg                                                                                                                                               <  1:452435/271‑1 (MQ=255)                                                                                                                gTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGTTTTATCCAGCAGGATCACATGACCGGAATTCTCTGCACCGATACGCCAGCCTTTCTCCTGCATTTTTTCCAGTACGTAGCGGTCACCCACTTTCGCGCGCGCaaa                                                                                                                                                                                                                                                    >  2:159665/1‑160 (MQ=255)                                                                                                                 tgcacccgccgcCACCCCCTCCCAGCCAGCACCGATGCCCTCCCCCGTTGTAGTTTTATCCTGCTGGCTCACATGACCGGAATTCTCTGCACCGATACGCCAGCCTTTCTCCTGCATTTTTTCCCTTACGTAGCGGTCACCCACTTTCGCGCGCGCAAATGGAATTCCTAACTGTTTCAGCGCCAGTTCAAGCCCCATGTTGCTCATCAATGTACCCACAGCGCCACCACGCAGCTGGCCCTGACGAAGACCTTCACGCGCGATGATATACag                                                                                                                                  <  2:87563/267‑2 (MQ=255)                                                                                                                 tGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGTTTTATCCAGCAGGATCACATGACCGGAATTCTCTGCACCGATACGCCAGCCTTTCTCCTGCATTTTTTCCAGTACGTAGCGGTCACCCACTTTCGCGCGCGCAAATGGAATTCCTAAATGTTTCAGCGCCAGTTCAAGCCCCATGTTGCCCATCAATGTACCCACAGCGCCACCACGCAGCTGGCCCTGACGAAGACCTTCACGCGCGATGAAATACAtg                                                                                                                                 >  1:87564/1‑274 (MQ=255)                                                                                                                    cATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGTTTTATCCAGCAGGATCACATGACCGGAATTCTCTGCACCGATACGCCAGCCTTTCTCCTGCATTTTTTCCAGTACGTAGCGGTCACCCACTTTCGCGCGCGCAAATGGa                                                                                                                                                                                                                                                <  1:159668/160‑1 (MQ=255)                                                                                                                           catcgttgcgggcttggaggtgctggcggcgatggcacgtaaccatatgagcctgcacgacctttgcagcggcatgaaaatgttcccgcagattctggttaacgtacgttacaccgcaggtagcggTCACCCACTTTCGCGCGCGCAAATGGAATTCCTAACTGTTTCAGCGCCAGTTCAAGCCCCATGTTGCTCATCAATGTACCCACAGCGCCACCACGCAGCTGGCCCTGACGAAGACCTTCACGCGCGATGATATACATGATCTGATCGcc                                                                                                                      <  1:58237‑M2/149‑1 (MQ=255)                                                                                                                                       aaGCCAGCAACGATGCCGTCACCGGTAATAGTTTTATCCAGCAGGATCACATGACCGGAATTCTCTGCACCGATACGCCAGCCTTTCTCCTGCATTTTTTCCAGTACGTAGCGGTCACCCACTTTCGCGCGCGCAAATGGAATTCCTAACTGTTTCAGCGCCAGTTCAAGCCCCATGTTGCTCATCAATGTACCCACAGCGCCACCACGCAGCTGGCCCTGACGAAGACCTTCACGCGCGATGATATACATGACCTAATCGCCATCCACTTTAt                                                                                                           >  1:417586/1‑274 (MQ=255)                                                                                                                                                                          aTCCAGCAGGATCACATGACCGGAATTCTCTGCACCGATACGCCAGCCTTTCTCCTGCATTTTTTCCAGTACGTAGCGGTCACCCACTTTCGCGCGCGCAAATGGAATTCCTAACTGTTTCAGCGCCAGTTCAAGCCCCATGTTGCTCATCAATGTACCCACAGCGCCACCACGCAGCTGGCCCTGACGAAGACCTTCACGCGCgat                                                                                                                                           >  1:3413/1‑207 (MQ=255)                                                                                                                                                                              agcagGATCACATGACCGGAATTCTCTGCACCGATACGCCAGCCTTTCTCCTGCATTTTTTCCAGTACGTAGCGGTCACCCACTTTCGCGCGCGCAAATGGAATTCCTAACTGTTTCAGCGCCAGTTCAAGCCCCATGTTGCTCATCAATGTACCCACAGCGCCACCACGCAGCTGGCCCTGACGAAGACCTTCACGCGCGATGata                                                                                                                                       <  2:3413/207‑1 (MQ=255)                                                                                                                                                                                cagGATCACATGACCGGAATTCTCTGCACCGATACGCCAGCCTTTCTGCTGCATTTTTTCCAGTACGTAGCGGTCACCCACTTTcg                                                                                                                                                                                                                                                              >  1:695533/1‑86 (MQ=255)                                                                                                                                                                                cagGATCACATGACCGGAATTCTCTGCACCGATACGCCAGCCTTTCTCCTGCATTTTTTCCAGTACGTAGCGGTCACCCACttt                                                                                                                                                                                                                                                                >  1:16100/1‑84 (MQ=255)                                                                                                                                                                                cagGATCACATGACCGGAATTCTCTGCACCGATACGCCAGCCTTTCTCCTGCATTTTTTCCAGTACGTAGCGGTCACCCACTTTCGCGCGCGCAAATGGAATTCCTAACTGTTTCAGCGCCAGTTCAAGCCCCATGTTGCTCATCAATGTACCCACAGCGCCACCACGCAGCt                                                                                                                                                                       >  1:322259/1‑173 (MQ=255)                                                                                                                                                                                 cgtataacaTGCACGGAATTATCTNAACCGATACGCCAGCCTTTCTCTCGCATTTTTTCCAGTACGTAGCGGTCACCCACTTTCGCGCGCGCAAATGGAATGCCTAACTGTTTCAGCGCCAGTTCAAGCCCCATGTTGCTCATCAATGTACCCACAGCGCCACCACGCAGCTGGCCCTGACGAAGACCTTCACGCGCGATGATATACATGATCTGATCGCCATCGACTTTATTGCCTTCATGGTCAACCATAATCACGCGATCGCCATCGCCGTc                                                                <  2:417579/269‑1 (MQ=255)                                                                                                                                                                                    aTCACATGACCGGAATTCTCTGCACCGATACGCCAGCCTTTCTCCTGCATTTTTTCCAGTACGTAGCGGTCACCCACTTTcgcgcg                                                                                                                                                                                                                                                          <  2:695524/86‑1 (MQ=255)                                                                                                                                                                                    aTCACATGACCGGAATTCTCTGCACCGATACGCCAGCCTTTCTCCTGCATTTTTTCCAGTACGTAGCGGTCACCCACTTTcgcg                                                                                                                                                                                                                                                            <  2:16100/84‑1 (MQ=255)                                                                                                                                                                                    aTCACATGACCGGAATTCTCTGCACCGATACGCCAGCCTTTCTCCTGCATTTTTTCCAGTACGTAGCGGTCACCCACTTTCGCGCGCGCAAATGGAATTCCTAACTGTTTCAGCGCCAGTTCAAGCCCCATGTTGCTCATCAATGTACCCACAGCGCCACCACGCAGCTGGcc                                                                                                                                                                   <  2:322253/173‑1 (MQ=255)                                                                                                                                                                                           gACCGGAATTCTCTGCACCGATACGCCAGCCTTTCTCCTGCATTTTTTCCAGTACGTAGCGGTCACCCACTTTCGCGCGCGCAAATGGAATTCCTAACTGTTTCAGCGCCAGtt                                                                                                                                                                                                                       >  2:134006/1‑114 (MQ=255)                                                                                                                                                                                              cGGAATGCTCTGCACCGATACGCCAGCCTTTCTCCTGCATTTTTGCCAGTACGTAGCGGTCACCCACTTTCGCGCGCGCAAATGGAATTCCTAACTGTTTCAGCGCCAGTTCAAGCCCCATGTTGCTCATCAATGTACCCACAGCGCCACCACGCAGCTGGCCCGAACGAAGACCTTCACGCGNGATGATATACATGATCTGATCGCCATCGACTTTATTGCCTTCATGGTCAACCATAATCACGCGATCGCCATCGCCGTCGAAGGCAATACCg                                                   >  1:520883/1‑275 (MQ=255)                                                                                                                                                                                               ggAATTCTCTGCACCGATACGCCAGCCTTTCTCCTGCATTTTTTCCAGTACGTAGCGGTCACCCACTTTCGCGCGCGCAAATGGAATTCCTAACTGTTTCAGCGCCAGTTCAAg                                                                                                                                                                                                                   <  1:134007/114‑1 (MQ=255)                                                                                                                                                                                                           aCCGATACGCCAGCCTTTCTCCTGCATTTTTTCCAGTACGTAGCGGTCACCCACTTTCGCGCGCGCAAATGGAATTCCTAACTGTTTCAGCGCCAGTTCAAGCCCCATGTTGCTCATCAATGTACCCACAGCGCCACCACGCAGCTGGCCCTGACGAAGACCTTCAcgcgc                                                                                                                                              >  1:411053/1‑171 (MQ=255)                                                                                                                                                                                                               aTACGCCAGCCTTTCTCCTGCATTTTTTCCAGTACGTAGCGGTCACCCACTTTCGCGCGCGCAAATGGAATTCCTAACTGTTTCAGCGCCa                                                                                                                                                                                                                          >  1:555201/1‑91 (MQ=255)                                                                                                                                                                                                               aTACGCCAGCCTTTCTCCTGCATTTTTTCCAGTACGTAGCGGTCACCCACTTTCGCGCGCGCAAATGGAATTCCTAACTGTTTCAGCGCCAGTTCAAGCCCCATGTTGCTCATCAATGTACCCACAGCGCCACCACGCAGCTGGCCCTGACGAAGACCTTCACGCGCgatg                                                                                                                                          <  2:411046/171‑1 (MQ=255)                                                                                                                                                                                                                   gCCAGCCTTTCTCCTGCATTTTTTCCAGTACGTAGCGGTCACCCACTTTCGCGCGCGCAAATGGAATTCCTAACTGTTTCAGCGCCAGTTc                                                                                                                                                                                                                      <  2:555192/91‑1 (MQ=255)                                                                                                                                                                                                                      aGCCTTTCTCCTGTATTTTTTCCAGTCCGTTGCGGTCACCCACTTTCGCGCGCGCAAATGGAATTCCTAACTGTTTCAGCGCCAGTTCAAGCCCCATGTTGCTCATCAATGTACCCACAGCGCCACCACGCAGCTGGCCCTGACGAAGACCTTCACGCGCGATGATATACATGATCTGATCGCCATCGACTTTATTGCCTTCATGGTCAACCATAATCACGCGATCGCCATCGCCGTCGAAGGCAATACCGAGATCCGCTTTTTCAGCCAGcaca                           <  1:159694/275‑1 (MQ=255)                                                                                                                                                                                                                       gCCTTTCTCCTGCATTTTTTCCAGTACGTAGCGGTCACCCACTTTCGCGCGCGCAAATGGAATTCCTAACTGTTTCa                                                                                                                                                                                                                                >  2:502339/1‑77 (MQ=255)                                                                                                                                                                                                                           ttCTCCTGCATTTTTTCCAGTACGTAGCGGTCACCCACTTTCGCGCGCTCAAACGGAATTCTTAACTGTTTCAgcgc                                                                                                                                                                                                                            <  1:502346/77‑1 (MQ=255)                                                                                                                                                                                                                                             aGTACGTAGCGGTCACCCACTTTCGCGCGCGCAAATGGAATTCCTAACTGTTTCAGCGCCAGTTCAAGCCCCATGTTGCTCATCAATGTACCCACAGAGCCACCACGACGCTGGCCCTGACGAAGACCTTCACGCGCGATGATCTACATGATCTGATCCCCATCGACTTTATTGCCTACATGGTAAAACATACTCACACGatcg                                                                           >  1:402218/1‑204 (MQ=255)                                                                                                                                                                                                                                             aGTACGTAGCGGTCACCCACTTTCGCGCGCGAAAATGGAATTCCTAACTGTTTCAGCGCCAGTTCAAGCCCCATGTTGCTCATCAATGTACCCACAGCGCCAACACGCAGCTGGCCCTGACGACGACCTTCACGCGCGATGATATACATGATCTGATCGCCATCGACTTTATTCCCTTCATGGTCAACCATAATACCGCAATCGCCATCGCCTTCAAAGACAATACCGAGACAAACCTCTTCCGCCAGCACCCCCGCCTGGatnngtctcctat     >  2:74060/1‑262 (MQ=255)                                                                                                                                                                                                                                                 cGTATCGTTCACCCACTTTCGCGCGCGCAAATGGAATTCCTAACTGTGTCAGCGCCAGTTCAAGCCCCATGTTGCTCATCAATGTACCCACAGCGCCACCACGCAGCTGGCCCTGACGAAGTCCTTCACGCGAGAGGATATACATGATCTGATCGACATCGACTTTATTGCCTTCATGGTCAACCAGAATCACGCGatcgccat                                                                       <  2:402211/204‑1 (MQ=255)                                                                                                                                                                                                                                                 cGTAGGGGCAACNCACTTTCGCGAGCGCAAATGGAATTCCTAACTGTTTCAGCACCAGTTCAAGCCCCATGTTGCTCATTAATGTACCCACAGCGCCACCACGCAGCTGGCCCTAACGAAGACCTTCACGCGCGATGATATACATGATCTGATCGCCATCGACTTTATTGCCTTCATGGTCAACCATAATCACGCGATCGCCATCGCCGTCGAAGGCAATACCGAGATCCGCTTTTTCAGCCAGCACACGAGCCTGGAGCGCGCGAACGTCgg  <  2:520876/273‑1 (MQ=255)                                                                                                                                                                                                                                                 cGTAGCGGTCACCCACTTTCGCGCGCGCAAATGGAATTCCTAACTGTGTCAGCGCCAGTTCAAGCCCCATGTTGCTCATCAATGAACCCACAGCGCCACCACGCAGCTGGCCCTGACGAAGACCTTCACGCGCGATGATATACATGATCTGATCGCCATCGACTTTATTGCCTTCATGGTCAACCATAATCACGCGATCGCCATCGCCGTCGAAGGCAATACCGAGATCCGCTTTTTCAGCCAGcaca                           <  1:74061/248‑1 (MQ=255)                                                                                                                                                                                                                                                    agcggTCACCCACTTTCGCGCGCGCAAATGGAATTCCTAACTGTTTCAGCGCCAGTTCAAGCCCCATGTTGCTCATCAATGTACCCACAGCGCCACCACGCAGCTGGCCCTGACGAAGACCTTCAcg                                                                                                                                                 >  2:9805‑M2/6‑127 (MQ=255)                                                                                                                                                                                                                                                        gTCACCCACTTTCGCGCGCGCAAATGGAATTCCTAACTGTTTCAGCGCCAGTTCAAGCCCCATGt                                                                                                                                                                                                           >  2:437821‑M2/2‑65 (MQ=255)                                                                                                                                                                                                                                                        gTCACCCACTTTCGCGCGCGCAAATGGAATTCCTAACTGTTTCAGCGCCAGTTCAAGCCCCATGTTGCTCATCAATGTACCCACAGCGCCACCACGCAGCTGGCCCTGACGAAGACCTTCAcgcgcg                                                                                                                                             <  1:9805‑M2/126‑1 (MQ=255)                                                                                                                                                                                                                                                         tCACCCACTTTCGCGCGCGCAAATGGAATTCCTAACTGTTTCa                                                                                                                                                                                                                                >  1:99015/1‑43 (MQ=255)                                                                                                                                                                                                                                                         tCACCCACTTTCGCGCGCGCAAATGGAATTCCTAACTGTTTCAGCGCCAGTTCAAGCCCCATGTTGCTCATCAATGTACCCACAGCGCCACCACGCAGCTGGCCCTGACGAAGACCTTCACGCGCgat                                                                                                                                           >  2:52764/1‑128 (MQ=255)                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                                         CTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGTTTTATCCAGCAGGATCACATGACCGGAATTCTCTGCACCGATACGCCAGCCTTTCTCCTGCATTTTTTCCAGTACGTAGCGGTCACCCACTTTCGCGCGCGCAAATGGAATTCCTAACTGTTTCAGCGCCAGTTCAAGCCCCATGTTGCTCATCAATGTACCCACAGCGCCACCACGCAGCTGGCCCTGACGAAGACCTTCACGCGCGATGATATACATGATCTGATCGCCATCGACTTTATTGCCTTCATGGTCAACCATAATCACGCGATCGCCATCGCCGTCGAAGGCAATACCGAGATCCGCTTTTTCAGCCAGCACACGAGCCTGGAGCGCGCGAACGTCGG  >  CP009273/3316259‑3316771

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.