New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 3541372	NA (NA)	6 (0.160)	6/302	NT	12.8%	coding (2058/2085 nt)	malQ	4‑alpha‑glucanotransferase (amylomaltase)
	?	CP009273	= 3541698	41 (1.110)					coding (1732/2085 nt)	malQ	4‑alpha‑glucanotransferase (amylomaltase)

GCTGTTCAAAGAGTACTTTAACCTGACTATCGGCGAGACCATCAAATCCTGGTCGATGCTGGAAACCATTATCTCGGTGTGCGGTCTGGTAGGCTGTCTGCTGCTGAATATGGTGATTTGATAACACTGACTGCCGGATGCG‑‑GCGTGAC‑CGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCCATCATCGGCAAACATCGACTCAAGCGTTGCGGAAAGCTTGCGTCGCCAGTTTTTATACTGGTAACTGGTGCCAGGAATATTCACCGGTTCGGCCATATCCAGCCAGTCTTCCGGCTGTAGTCCTAACAGAGCACTGTTACTGTCGGCAATGTAGCGCTGCAAACCACGGTTCAGCGTCGGCGTCATCGACATCAACGATGCCTTATGCCCGGCACGTTTCGGCAGACAACCATATTTAT  >  CP009273/3541114‑3541646                                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                                                   gCTGTTCAAAGAGTACTTTAACCTGACTATCGGCGAGACCATCAAATCCTGGTCGATGCTGGAAACCATTATCTCGGTGTGCGGTCTGGTAGGCTGTCTGCTGCTGAATATGGTGATTTGATAACACTGACTGCCGGATGCG‑‑GCGTGAC‑CGCCTTATCCGGCCTACGATTCGGGATGTATTAGTAGGCCGGATAAGACGCGACAAGCATCGCATCCGGCATCAACCGCACTCTACATCTACTTCGCTGCAGCCCTCAGCCGGCTGTCAAAATcca                                                                                                                                                                                                                                                                    >  1:352033/1‑274 (MQ=255)    gTTCAAAGAGTACTTTAACCTGACTATCGGCGAGACCATCAAATCCTGGTCGATGCTGGAAACCATTATCTCGGTGTGCGGTCTGGTAGGCTGTCTGCTGCTGAATATGGTGATTGGATAACACTGACTGCCGGATGCG‑‑GCGTGAC‑CGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACACGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTc                                                                                                                                                                                                                                                                  >  1:693205/1‑274 (MQ=255)                      ccTGACTATCGGCGAGACCATCAAATCCTGGTCGATGCTGGAAACCATTATCTCGGTGTGCGGTCTGGTAGGCTGTCTGCTGCTGAATATGGTGATTTGATAACACTGACTGCCGGATGCG‑‑GCGTGAC‑CGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCCCGTCCGCGCTGCCCCGTCCGTCCAAAGCCTTCCGCCACttttggagtccgg                                                                                                                                                                                                                                               >  2:503062/1‑264 (MQ=255)                          aCTATCGGCGAGACCATCAAATCCTGGTCGATGCTGGAAACCATTATCTCGGTGTGCGGTCTGGTAGGCTGTCTGCTGCTGAATATGGTGATTTGATAACACTGACTGCCGGATGCG‑‑GCGTGAC‑CGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCcatcat                                                                                                                                                                                                                                            >  1:579107/1‑274 (MQ=255)                                    agaCCATCAAATCCTGGTCGATGCTGGAAACCATTATCTCGGTGTGCGGTCTGGTAGGCTGTCTGCTGCTGAATATGGTGATTTGATAACACTGACTGCCGGATGCG‑‑GCGTGAC‑CGCCTTATCCGGCCTACGATTCGGGATGAATTATTAGGCCGGATAAGACTCGTCAAGCATCGCATCCGGNATCAACCGCACTCTCCTTCTTCTTCGCTTCCGCTCTGCGCCGTCCGTCCAAATCCTTCAGCACCTTGTGCCCGCCACCCTCGGCAAACATc                                                                                                                                                                                                                                 >  1:547587/1‑275 (MQ=255)                                                ccTGGTCGATGCTGGAAACCATTATCTCGGTGTGCGGTCTGGTAGGCTGTCTGCTGCTGAATATGGTGATTTGATAACACTGACTGCCGGATGCG‑‑GCGTGAC‑CGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCCCGCAATCATCGGCAAACATCTACTCAATCGtt                                                                                                                                                                                                                     >  2:628767/1‑275 (MQ=255)                                                                    aTTATCTCGGTGTGCGGTCTGGTAGGCTGTCTGCTGCTGAATATGTTGATTTGATAACACTGACTGCCGGATGCG‑‑GCGTGAC‑CGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCTGGATATGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCCATCATCGGCAAACATCGACTCAAGCGTTGCGGAAAGCTTGCGTCGcc                                                                                                                                                                                                  <  1:628776/274‑1 (MQ=255)                                                                                         gttgggtGTCTGCTGCTGCATATTGTGATTTGATACCACTGACTGCCGGATGCG‑‑GCGTGAC‑CGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCCATCATCGGCAAACATCGACTCAAGCGTTGCGGAAAGCTTGCGTCGCCAGTTTTTATACTGGTAACTGGt                                                                                                                                                                            <  1:126533/269‑1 (MQ=255)                                                                                         gTATGCTTTTTGCTGCTGAATATGGTTATTTGTTACCACTGACTGCCGGATGCG‑‑GCGTGAC‑CGCCTTATCCGCCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCCATCATCGGCAAACATCGACTCAAGCGTTGCGGAAAGCTTGCGTCGCCAGTTTTTATACTGGTAACTGGt                                                                                                                                                                            <  1:344382/275‑1 (MQ=255)                                                                                                 tCTGGTGCTGAATTTGGTGATTTTATAACACTGACTGCCGGATGCG‑‑GCGTTAC‑CGCCTTATCCGGCCTACGATGCGGGATGAATTAGTAGNCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCCATCATCGGCAAACATCGACTCAAGCGTTGCGGAAAGCTTGCGTCGCCAGTTTTTATACTGGTAACTGGTGCCAGGa                                                                                                                                                                     <  1:548799/274‑1 (MQ=255)                                                                                                                ggTGATTTGATAACACTGACTGCCGGATGCG‑‑GCGTGAC‑CGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTAAAGCATCGCATCCGGCATCAACCGCCCTCTACTTCTTCTTCGCAGCAGCTCTGCGCCTTCTGTCCAAATCCTTCCGCAACTTGTTCACGCCATCATCGGCAAACATCGACACAAGCGTTGCGGAAAGCAGGCGTCGCCAGTATTTATACAGGTAAATGGTGCCAGGAATATTCACAGGtttt                                                                                                                                                      >  2:628368/1‑272 (MQ=255)                                                                                                                    aTTTGATAACACTGACTGCCGGATGCG‑‑GCGTGAC‑CGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCCATCATCGGCAAACATCGACTCAAGCGTTGCGGAAAGCTTGCGTCGCCAGTTTTTATACTGGTAACTGGTGCCAGGAATATTCAc                                                                                                                                                             <  1:628377/263‑1 (MQ=255)                                                                                                                       tGATAACACTGACTGCCGGATGCG‑‑GCGTGAC‑CGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCCATCATCGGCAAACATCGACTCAAGCGTTGCGGAAAGCTTGCGt                                                                                                                                                                                                      >  1:82582/1‑219 (MQ=255)                                                                                                                           aaCACTGACTGCCGGATGCG‑‑GCGTGAC‑CGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCCATCATCGGCAAACATCGACTCAAGCGTTGCGGAAAGCTTGCGTCGcc                                                                                                                                                                                                  <  2:82581/219‑1 (MQ=255)                                                                                                                              ggttgatgCCGGATGCGATGCTTGACGCGTCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCCATCATCGGCAAACATCGACTCAAGCGTTGCGGAAAGCTTGCGTCGcc                                                                                                                                                                                                  <  1:52503/213‑1 (MQ=255)                                                                                                                               ctgactgCCGGATGCG‑‑GCGTGAC‑CGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCCATCATCGGCAAACATCGACTCAAGCGTTGCGGAAAGCTTGCGt                                                                                                                                                                                                      >  1:602582/1‑211 (MQ=255)                                                                                                                                 taaaagagaaggcg‑‑gcgTGAC‑ATANTTCTCCGGCCTAAGTTTCGGGATGAATTAGTCGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCTCTGCAGCTCTGCGCCGTCTGTCCAACTCCTTCAGCAACTTGTTCACGCCATCATCGGCAAACATCGACTCAAGCGTTGCGGAAAGCTTGCGTCGCCAGTTTTTATACTGGTAACTGGTGCCAGGAATATTCACCGGTTCGGCCATATCCAGCCAGt                                                                                                                                      <  2:475811/262‑1 (MQ=255)                                                                                                                                  actgCCGGATGCG‑‑GCGTGAC‑CGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCCATCATCGGCAAACATCGACTCAAGCGTTGCGGAAAGCTTGCGTCGCCAGTTTTTATACTGGTAACTGGTGCCAGGAATATTCACCGGTTCGGCCATATCCAGCCAGTCtt                                                                                                                                   >  1:94234/1‑275 (MQ=255)                                                                                                                                   ctgCCGGATGCG‑‑GCGTGAC‑CGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCCATCATCGGCAAACATCGACTCAAGCGTTGCGGAAAGCTTGCGTCGcc                                                                                                                                                                                                  <  2:602573/211‑1 (MQ=255)                                                                                                                                        ggATGCG‑‑GCGTGAC‑CGCCTTTTCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCNCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCCATCATCGGCAAACATCGACTCAAGCGTTGCGGAAAGCTTGCGTCGCCAGTTTTTATACTGGTAACTGGTGCCAGGAATATTCACCGTTTCGGCCATATCCTGCCAGTCTTCCGGCt                                                                                                                             <  1:503069/275‑1 (MQ=255)                                                                                                                                                  ggTGAC‑CGCTTTATCCGGCCTCCGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCTCATCCGGCATCAACCGCACTCTACTTATTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCCATCATCGGCAAACATCGACTCAAGCGTTGCGGAAAGCTTGCGTCGCCAGTTTTTAGACTGGTAACTGGTGCCAGGAATATTCACCGGTTCGGCCATATCCAGCCAGTCTTCCGGCTGt                                                                                                                           <  2:94233/268‑1 (MQ=255)                                                                                                                                                  cgTGAC‑CGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCCATCATCGGCAAACATCGACTCAAGCGTTGCGGAAAGCTTGCGt                                                                                                                                                                                                      >  1:535741/1‑194 (MQ=255)                                                                                                                                                      aC‑CGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCCATCATCGGCAAACATCGACTCAAGCGTTGCGGAAAGCTTGCGTCGcc                                                                                                                                                                                                  <  2:535733/194‑1 (MQ=255)                                                                                                                                                           ccTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCCATCATCGGCAAACATCGACTCAAGCGTAGCGGAAAGCTTGNGTCGCCAGNTTTTATACTGGTAACTGGTGCCAGGAATATTCACCGGTTCGGCCATATccagc                                                                                                                                          >  1:475818/1‑246 (MQ=255)                                                                                                                                                                     ccTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATACGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAACTCCTTCAGCAACTTGTTCACGCCGTCATCGGCAAACATCGACTCAAGCGTTGCGGAAAGCTTGCGTCGCCAGTTTTTATACTGGTAACTGGTGCAAGGAATAATCACCGGTTCGGCACTATCCAGACAGTCTTCCGGCTGTAGTCCTCACAGAGCACTGTTACt                                                                                                    >  2:250602/1‑274 (MQ=255)                                                                                                                                                                         cGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCCATCATCGGCAAACATCGACTCAAGCGTTGCGGAAAGCTTGCGt                                                                                                                                                                                                      >  1:31092/1‑172 (MQ=255)                                                                                                                                                                             tCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCCATCATCGGCAAACATCGACTCAAGCGTTGCGGAAAGCTTGCGTCGcc                                                                                                                                                                                                  <  2:31092/172‑1 (MQ=255)                                                                                                                                                                               gggATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCCATCATCGGCAAACATCGACTCAAGCGTTGCGGAAAGCTTGCGt                                                                                                                                                                                                      >  1:285413/1‑166 (MQ=255)                                                                                                                                                                                   tGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCCATCATCGGCAAACATCGACTCAAGCGTTGCGGAAAGCTTGCGTCGcc                                                                                                                                                                                                  <  2:285408/166‑1 (MQ=255)                                                                                                                                                                                               ccGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCCATCATCGGCAAACATCGACTCAAGCGTTGCGGAAAGCTTGCGTCGCCAGTTTTTATACTGGTAACTGGTGCCAGGAATATTCAc                                                                                                                                                             >  2:692257/1‑191 (MQ=255)                                                                                                                                                                                                   aTAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCCATCATCGGCAAACATCGACTCAAGCGTTGCGGAAAGCTTGCGTCGCCAGTTTTTATACTGGTAACTGGTGCCAGGAATATTCACCGGt                                                                                                                                                         <  1:692266/191‑1 (MQ=255)                                                                                                                                                                                                               aaGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCggtctgtatcaggatcgcgaactggcgaagcaagggctgctggat                                                                                                                                                                                                                                       >  1:445719‑M1/1‑56 (MQ=255)                                                                                                                                                                                                                aGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCggtctgtatcaggatcgcgaactggcgaagcaagggctgctggatgcactgcataaatatggttgtctgccgaaacgtgccgggcataaggcatcgttgatgtcgatgacgccgacgctgaaccgtggtttgcagcgctac                                                                                                                                       >  2:170300‑M1/1‑55 (MQ=255)                                                                                                                                                                                                                  catcgcatcCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCggtctgtatcaggatcgcgaactggcgaagcaagggctgctggatgcactg                                                                                                                                                                                                                                 >  1:547447‑M1/1‑53 (MQ=255)                                                                                                                                                                                                                   atcgcatcCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCggtctgtatcaggatcgcgaactggcgaagcaagggctgctggatgcac                                                                                                                                                                                                                                   <  2:445712‑M1/101‑50 (MQ=255)                                                                                                                                                                                                                    tcgcatcCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCggtctgtatcaggatcgcgaactggcgaagcaagggctgctggatgcactgcataaatatggttgtctgccgaaacgtgccgggcataaggcatcgttgatgtcgatgacgccgacgctgaaccgtggtttgcagcgctacattg                                                                                                                                   <  1:170303‑M1/196‑146 (MQ=255)                                                                                                                                                                                                                      gcatcCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCggtctgtatcaggatcgcgaactggcgaagcaagggctgctggatgcactgcata                                                                                                                                                                                                                             <  2:547438‑M1/104‑56 (MQ=255)                                                                                                                                                                                                                            ggCATCAACCACACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCCATCATCGGCAAACATCGACTCAAGCGTTGCGGAAAGCTTGCGTCGCCAGTTTTTATACTGGTAACTGGTGCCAGGAATATTCACCGGTTCGGCCATATCCAGCCAGTCTTCCGGCTGCAGTCCTAACAGAGc                                                                                                             >  1:722558/1‑210 (MQ=255)                                                                                                                                                                                                                             gCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCCATCATCGGCAAACATCGACTCAAGCGTTGCGGAAAGCTTGCGTCGCCAGTTTTTATACTGGTAACTGGTGCCAGGAATATTCACCGGTTCGGCCATATCCAGCCAGTCTTCCGGCTGTAGTCCTAACAGAGCACTGTTACCGTCGGCAATGTAGCGCTGCAAACCACGGTTCAGCGTCGGCGTCATCCNCATCAAccc                                           >  2:273759/1‑273 (MQ=255)                                                                                                                                                                                                                                                    cttcGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCCATCATCGGCAAACATCGACTCAAGCGTTGCGGAAAGCTTGCGt                                                                                                                                                                                                      >  2:236311/1‑97 (MQ=255)                                                                                                                                                                                                                                                     ttcGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCCATCATCGGCAAACATCGACTCAAGCGTTGCGGAAAGCTTGCGTCGCCAGTTTTTATACTGGTAACTGGTGCCAGGAATATTCACCGGTTCGGCCATATCCAGCCAGTCTTCCGGCTGTAGTCCTAACAGAGCACTGTTACTGTCGGCAATGTAGCGCTGCAAACCACGGTTCAGCGTCGGCGTCATCGACATCAACGATGACTTATGCCCCGCACGTTTc                     >  1:244515/1‑273 (MQ=255)                                                                                                                                                                                                                                                      tcGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCCATCATCGGCAAACATCGACTCAAGCGTTGCGGAAAGCTTGCGTCGCCa                                                                                                                                                                                                 >  1:628131/1‑100 (MQ=255)                                                                                                                                                                                                                                                      tcGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCCATCATCGGCAAACATCGACTCAAGCGTTGCGGAAAGCTTGCGTCGCCAGTTTTTATACTGGTAACTGGTGCCAGGAATATTCACCGGTTCGGCCAAATCCAGCCAGTCTTCCGGCTGTATTCCTAACAGAGACCTGTTACTGTCGGCAATGTAGCGCTGCAAACCACGGTTCAGCGTCGGCGTACTCGACATCAACGATCCCTAATCCCCGACACGTTTCGGc                  >  1:350462/1‑275 (MQ=255)                                                                                                                                                                                                                                                        gCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCCATCATCGGCAAACATCGACTCAAGCGTTGCGGAAAGCTTGCGTCGcc                                                                                                                                                                                                  <  1:236316/97‑1 (MQ=255)                                                                                                                                                                                                                                                          tGCATCTCTGCGCCGTCTGTCCAAATCCTCCAGCATCTTGTTCACGCAATCATCGTCAAACCTTGACTCACGCGTTGCGGAAAGCTTGCGTCGCCAGTTTTTATACTGGTAACGGGTGCCAGGAATATTCACCGGTTCGGCCATATCCAGCCAGTCTTCCGGCTGTAGTCCTAACAGAGCACTGTTACTGTCGGCAATGTAGCGCTGCAAACCACGGTTCAGCGTCGGCGTCATCGACATCAACGATGCCTTATGCCCGGCACGTTTCGGCAGAc              <  1:216774/275‑1 (MQ=255)                                                                                                                                                                                                                                                          tGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCCATCATCGGCAAACATCGACTCAAGCGTTGCGGAAAGCTTGCGTCGCCAGttt                                                                                                                                                                                             <  2:628122/100‑1 (MQ=255)                                                                                                                                                                                                                                                               ctctGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCCATCATCGGCAAACATCGACTCAAGCGTTGCGGAAAGCTTGCGTCGCCAGTTTTTATACTGGTAACTGGTGCCAGGAATATTCACCGGTTCGGCCATATCCAGCCAGTCTTCCGGCTGTAGTCCTAACAGAGCACTGTTACTGTCGGCAATGTAGCGCTGCAAACCACGGTTCAGCGTCGGCGTCATCGACATCAACGATGCCTTATGCCCGGCACGTTTCGGCAGACAACCa         <  1:250607/275‑1 (MQ=255)                                                                                                                                                                                                                                                                    cgcggtctgtatcaggatcgcgaactggcgaagcaagggctgctggatgcactgcataaatatggttgtctgccgaaacg                                                                                                                                                                                                       >  2:239329‑M1/1‑3 (MQ=255)                                                                                                                                                                                                                                                                    cgcggtctgtatcaggatcgcgaactggcgaagcaagggctgctg                                                                                                                                                                                                                                          >  2:87039‑M1/1‑3 (MQ=255)                                                                                                                                                                                                                                                                      cggtctgtatcaggatcgcgaactggcgaagcaagggctgctggatgcactgcataaatatggttgtctgccgaaacgtgccgggcataaggcatcgttgatgtcgatgacgccgacgctgaaccgtggtttgcagcgctacattgccgacagtaacagtgctctgttaggactacagccggaagactggctggatatggc                                                                            >  1:393598‑M1/1‑1 (MQ=255)                                                                                                                                                                                                                                                                      ccGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCCATCATCGGCAAACATCGACTCAAGCGTTGCGGAAAGCTTGCGTCGCCAGTTTTTATACTGGTAACTGGTGCCAGGAATATTCACCGGTTCGGCCATATCCAGCCAGTCTTCCGGCTGTAGTCCTAACAGAGCACTGTTACTGTCGGCAATGTAGCGCTGCAAACCACGGTTCAGCGTCGGCGTCATCGACATCAACGATGCCTTATGCCCGGCACGTTTCGGCAGACAACCATATTTAt  <  1:273764/275‑1 (MQ=255)                                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                                                   GCTGTTCAAAGAGTACTTTAACCTGACTATCGGCGAGACCATCAAATCCTGGTCGATGCTGGAAACCATTATCTCGGTGTGCGGTCTGGTAGGCTGTCTGCTGCTGAATATGGTGATTTGATAACACTGACTGCCGGATGCG‑‑GCGTGAC‑CGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGTCTGTCCAAATCCTTCAGCAACTTGTTCACGCCATCATCGGCAAACATCGACTCAAGCGTTGCGGAAAGCTTGCGTCGCCAGTTTTTATACTGGTAACTGGTGCCAGGAATATTCACCGGTTCGGCCATATCCAGCCAGTCTTCCGGCTGTAGTCCTAACAGAGCACTGTTACTGTCGGCAATGTAGCGCTGCAAACCACGGTTCAGCGTCGGCGTCATCGACATCAACGATGCCTTATGCCCGGCACGTTTCGGCAGACAACCATATTTAT  >  CP009273/3541114‑3541646

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.