New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 3541372	NA (NA)	6 (0.160)	6/302	NT	12.8%	coding (2058/2085 nt)	malQ	4‑alpha‑glucanotransferase (amylomaltase)
	?	CP009273	= 3541698	41 (1.110)					coding (1732/2085 nt)	malQ	4‑alpha‑glucanotransferase (amylomaltase)

GCGTTGCGGAAAGCTTGCGTCGCCAGTTTTTATACTGGTAACTGGTGCCAGGAATATTCACCGGTTCGGCCATATCCAGCCAGTCTTCCGGCTGTAGTCCTAACAGAGCACTGTTACTGTCGGCAATGTAGCGCTGCAAACCACGGTTCAGCGTCGGCGTCATCGACATCAACGATGCCTTATGCCCGGCACGTTTCGGCAGACAACCATATTTATGCAGTGCATCCAGCAGCCCTTGCTTCGCCAGTTCGCGATCCTGATACAGACCGCGCAGTACCACTTCATCCGGATACAGCCCCAGGGTTTTGCCCAGCGTTAGATCCCCGCACTCCCAGTAACCGCGCAGCGTTGGCAGGTCATGTGTCGCCGCAACCGCCATCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAA  >  CP009273/3541431‑3541949                                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                            gtgTTGCGGAATGGTTGCGTCGCCAGTTTTTATACTTGTAACTGGTGTCAGGAATATTCACCGGTTCGGTCATATCCAGCCAGTCTTCCGGCTGTAGGCCTAACAGAGCACTGTTANGGTCGGCAATGTAGCGCTGCAAACCACGGTTCAGCGTCGGCGTCATCGACATCAACGATGCCTTATGCCCGGCACGTTTCGGCAGACAACCATATTTATGCAGTGCATCCAGCAGCCCTTGCTTCGCCAGTTCGCGATCCTGATACAGACCGCGCAGt                                                                                                                                                                                                                                                      <  1:651721/273‑1 (MQ=255)             gCTTGCGTCGCCAGTTTTTATACTGGTAACTGGTGCCAGGAATATTCACCGGTTCGGCCATATCCAGCCAGTCTTCCGGCTGTAGTCCTAACAGAGCACTGTTACTGTCGGCAATGTAGCGCTGCAAACCACGGTTCAGCGTCGGCGTCATCGACATCAACGATGCCTTATGCCCGGCACGTTTCGGCAGACAACCATATTTATGCAGTGCATCCAGCAGCCCTTGCTTCGCCAGTTCGCGATCCTGATACCGACCGCGCCGAACCACTTCATcc                                                                                                                                                                                                                                          >  1:27383/1‑275 (MQ=255)                                     ggTAACTGGTGCCAGGAATATTCACCGGTTCGGCCATATCCAGCCAGTCTTCCGGCTGTAGTCCTAACAGAGCACTGTTACTNTCGGCAATNTAGCGCTGCAAAGCACGGTTCAGCGTCGGCGTCATCGACATCAACGATGCCTTATGCACGGCACGTTTCGGCAGACAACCATATTTATGCAGTGCATCCAGCAGCCCTTGCTTCGCCAGTTCGCGATCCTGATACAGACCGCGCAGTACCACTTCATCCGGATACAGCCCCAGGGTTTTGccc                                                                                                                                                                                                                  <  1:479738/275‑1 (MQ=255)                                     ggTAACTGGTGCCAGGAATATTCACCGGTCCGGCCATATCCAGCCAGTCTTCCGGCTGTAGTCCTAACAGAGCACTGTTACTGTCGGCAATGTAGCGCTGCAAACCACGGTTCAGCGTCGGCGTCATCGACATCAACGATGCCTTATGCCCGGCACGTTTCGGCAGACAACCATATTTATGCAGTGCATCCAGCAGCCCTTGCTTCGCCAGTTCGCGATCCTGATACAGACCGCGCAGTACCACTTCATCCGGATACAGCCCCAGGGttt                                                                                                                                                                                                                       >  1:427257/1‑270 (MQ=255)                                                       tatTCACCGGTTCGGCCATATCCAGCCAGTCTTCCGGCTGTAGTCCTAACAGAGCACTGTTACTGTCGGCAATGTAGCGCTGCAAACCACGGTTCAGCGTCGGCGTCATCGACATCAACGATGCCTTATGCCCGGCACGTTTCGGCAGACAACCATATTTATGCAATGCATCCAGCATCCCTTGCTTCGCCAGTTCGCGATCCTGATACAGACCGCGCAGTACCACTTCATCCGGATACAGCCCCAGGGTTTTGCCCAGCGTTAGATCCCCGCa                                                                                                                                                                                                 >  1:404988/1‑274 (MQ=255)                                                                     gCCATATCCAGCCAGTCTTCCGGCTGTAGTCCTAACAGAGCACTGTTACTGTCGGCAATGTAGCGCTGCAAACCACGGTTCAGCGTCGGCGTCATCGACATCAACGATGCCTTATGCCCGGCACGTTTCGGCAGACAACCATATTTATGCAGTGCATCCAGCAGCCCTTGCTTCGCCAGTTCGCGATCCTGATACAGACCg                                                                                                                                                                                                                                                            >  1:393598‑M2/1‑200 (MQ=255)                                                                      ccATATCCAGCCAGTCTTCCGGCTGT‑GTCCTAACAGAGCACTGTTACTGTCGGCAATGTAGCGCTGCAAACCACGGTTCAGCGTCGGCGTCATCGACATCAACGATGCCTTATGCCCGGCACGTTTCGGCAGACAACCATATTTATGCAGTGCATCCAGCAGCCCTTGCTTCGCCAGTTCGCGATCCTGATACAGACCGCGCAGTACCACTTCATCCgg                                                                                                                                                                                                                                        >  2:425504/1‑219 (MQ=255)                                                                          atCCAGCCAGTCTTCCGGCTGT‑GTCCTAACAGAGCACTGTTACTGTCGGCAATGTAGCGCTGCAAACCACGGTTCAGCGTCGGCGTCATCGACATCAACGATGCCTTATGCCCGGCACGTTTCGGCAGACAACCATATTTATGCAGTGCATCCAGCAGCCCTTGCTTCGCCAGTTCGCGATCCTGATACAGACCGCGCAGTACCACTTCATCCGGATAc                                                                                                                                                                                                                                    <  1:425511/219‑1 (MQ=255)                                                                                ccagTCTTCCGGCTGTAGTCCTAACAGAGCACTGTTACTGTCGGCAATGTAGCGCTGCAAACCACGGTTCAGCGTCTGCGTCATCGACATCAACGATGCCTTATGCCCGGCACGTTTCGGCAGACAACCATATTTATGCAGTGCATCCAGCAGCCCTTGCTTCGCCAGTTCGCGATCCTGATACAAACCGCGCAGTACCCCGTCATCCGGATACAGCCCCAGGGTTTTGCCCACCGTTAGCACCACGACCTCCCAGTAACCCcgccgccatgcca                                                                                                                                                                       >  1:349739/1‑268 (MQ=255)                                                                                                aGTCCTAACAGAGCACTGTTACTGTCGGCAATGTAGCGCTGCAAACCACGGTTCAGCGTCGGCGTCATCGACATCAACGATGCCTTATGCCCGGCACGTTTCGGCAGACAACCATATTTATGCAGTGCATCCAGCAGCCCTTGCTTCGCCAGCTCGCGATCCTGATACAGACCGCGCAGTACCACTTCATCCGGATACAGCCCCAGGGtttt                                                                                                                                                                                                                      >  1:644201/1‑212 (MQ=255)                                                                                                    cTAACAGAGCACTGTTACTGTCGGCAATGTAGCGCTGCAAACCACGGTTCAGCGTCGGCGTCATCGACATCAACGATGCCTTATGCCCGGCACGTTTCGGCAGACAACCATATTTATGCAGTGCATCCAGCAGCCCTTGCTTCGCCAGTTCGCGATCCTGATACAGACCGCGCAGTACCACTTCATCCGGATACAGCCCCAGGGTTTTGccc                                                                                                                                                                                                                  <  2:644192/212‑1 (MQ=255)                                                                                                       aCAGAGCACTGTTCCTGTCGGCAATGTAGCGCTGCAAACCCCGGTTCAGCGTCGGCGTCATCGACATCAACGCTGCCTTATACCCGGCACGTTTCGGCAGACAATCATATTTATGCAGTGCATCCAGCAGCCCTTGCTTCGCCAGTTCGCGATGCTGATACAGACCGCGCAGTACAACTTCATCCGGAGACAGCCCCAGGGTTGTGCCCAGCGTTAGATCCCCCCCCTCCACGTACCCGCGCAGCGTTGGCCGGTCATGTGGCGCCGCAAgcgc                                                                                                                                                 >  2:153279/1‑274 (MQ=255)                                                                                                             cACTGTTACTGTCGGCAATGTAGCGCTGCAAACCACGGTTCAGCGTCGGCGTCATCGACATCAACGATGCCTTATGCCAGGCACGTTTCGGCAGACAACCATCTTTATGCAGTGCATCCAGCAGCCCTCGCTTCGCCAGTTCGCGATCCTGATACAGACCGCGCAGTACCACTTCATCCGAATACAGCACCAGGGTTTTTCCCAGCGTTAGATCCACGCACCCCCAGTAACCGCGCAGCGTTGGCAGGTCATGTGTCGCCGCTACCGCCATcc                                                                                                                                            >  2:36626/1‑272 (MQ=255)                                                                                                                     cTGTCGGCAATGTAGCGCTGCAAACCACGGTTCAGCGTCGGCGTCATCGACATCAACGATGCCTTATGCCCGGCACGTTTCGGCAGACAACCATATTTATGCAGTGCATCCAGCAGCCCTTGCTTCGCCAGTTCGCGATCCTGATACAGACCGCGCAGTACCACTTCATCCGGATACAGCCCCAGGGTTTTGCCCAGCGTTAGATCCCCGCACTCCCAGTAACCGCGCAGCGTTGGCAGGTCATGTGTCGCCGCAACCGCCATCGACTGCTCCg                                                                                                                                   >  1:418622/1‑274 (MQ=255)                                                                                                                       gTCGGCAATGTAGCGCTGCAAACCACGGTTCAGCGTCGGCGTCATCGACATCAACGATGCCTTATGCCCGGCACGTTTCGGCAGACAACCATATTTATGCAGTGCATCCAGCAGCCCTTGCTTCGCCAGTTCGCGATCCTGATACAGACCGCGCAGTACCACTTCATCCGGATACAGCCCCAGGGTTTTGCCCAGCGTTAGATCCCCGCACTCCCAGTAACCGCGCAGNCTTGGCAGGTCATGTGTCGGCTCAACCGCCAGCggcctacccccc                                                                                                                                 >  2:451442/1‑263 (MQ=255)                                                                                                                          ggCAATGTAGCGCTGCAAACCACGGTTCAGCGTCGGCGTCATCGACATCAACGATGCCTTATGCCCGGCACGTTTCGGCAGACAACCATATTTATGCAGTGCATCCAGCAGCCCTTGCTTCGCCAGTTCGCGATCCTGATACAGACCGCGCAGTACCACTTCATCCGGATACAGCCCCAGGGTTTTGCCCAGCGTTAGATccc                                                                                                                                                                                                     >  2:198666/1‑203 (MQ=255)                                                                                                                            cAATGTAGCGCTGCAAACCACGGTTCAGCGTCGGCGTCATCGACATCAACGATGCCTTATGCCCGGCACGTTTCGGCAGACAACCATATTTATGCAGTGCATCCAGCAGCCCTTGCTTCGCCAGTTCGCGATCCTGATACAGACCgcgcagagctgcagcgaagaagaagtagagtgcggttgatgccggatgcga                                                                                                                                                                                                          <  1:170303‑M2/196‑52 (MQ=255)                                                                                                                              aTGTAGCGCTGCAAACCACGGTTCAGCGTCGGCGTCATCGACATCAACGATGCCTTATGCCCGGCACGTTTCGGCAGACAACCATATTTATGCAGTGCATCCAGCAGCCCTTGCTTCGCCAGTTCGCGATCCTGATACAGACCGCGCAGTACCACTTCATCCGGATACAGCCCCAGGGTTTTGCCCAGCGTTAGATCCCCGCa                                                                                                                                                                                                 <  1:198669/203‑1 (MQ=255)                                                                                                                                gTAGCGCTGCAAACCACGGTTCAGCGTCGGCGTCATCGACATCAACGATGCCTTATGCCCGGCACGTTTCGGCAGACAACCATATTTATGCAGTGCATCCAGCAGCCCTTGCTTCGCCAGTTCGCGATCCTGATACAGACCgcgcagagctgcagcgaagaagaagtagagtgcggttgatgccggatgcgatgct                                                                                                                                                                                                      >  2:170300‑M2/1‑141 (MQ=255)                                                                                                                                                     cAGCGTCGGCGTCATCGACATCAACGATGCCTTATGCCCGGCACGTTTCGGCAGACAACCATATTTATGCAGTGCATCCAGCAGCCCTTGCTTCGCCAGTTCGCGATCCTGATACAGACCGCGCAGTACCACTTCATCCGGATACAGCCCCAGGGTTTTGCCCAGCGTTAGATCCCCGCACTCCCAGTAAc                                                                                                                                                                                      >  2:130181/1‑191 (MQ=255)                                                                                                                                                         gTCGGCGTCATCGACATCAACGATGCCTTATGCCCGGCACGTTTCGGCAGACAACCATATTTATGCAGTGCATCCAGCAGCCCTTGCTTCGCCAGTTCGCGATCCTGATACAGACCGCGCAGTACCACTTCATCCGGATACAGCCCCAGGGTTTTGCCCAGCGTTAGATCCCCGCACTCCCAGTAACcgcg                                                                                                                                                                                  <  1:130182/191‑1 (MQ=255)                                                                                                                                                                  aTCGACATCAACGATGCCTTATGCCCGGCACGTTTCGGCAGACAACCATATTTATGCAGTGCATCCAGCAGCCCTTGCTTCGCCAGTTCGCGATCCTGATACAGACCGCGCAGTACCACTTCATCCGGATACAGc                                                                                                                                                                                                                                 >  1:145818/1‑135 (MQ=255)                                                                                                                                                                      aCATCAACGATGCCTTATGCCCGGCACGTTTCGGCAGACAACCATATTTATGCAGTGCATCCAGCAGCCCTTGCTTCGCCAGTTCGCGATCCTGATACAGACCGCGCAGTACCACTTCATCCGGATACAGCCCCa                                                                                                                                                                                                                             <  2:145817/135‑1 (MQ=255)                                                                                                                                                                           gtttaagctacaggCCCGGCACGTTTTGGCAGACAACCATCTTTATGCAGTGCATCCAGCAGCCCTTTCTTCGCCAGTTCGCGATCCTGATACAGACCGCGCAGTACCCCTTCATCCTGATACAGCCCCAGGGTTTTGCCCAGCGTTAGATCCCCGCACTCCCAGTAACCGCGCAGCGTTGGCAGGTCATGTGTCGCCGCAACCGCCATCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCa                                                                             <  1:223105/261‑1 (MQ=255)                                                                                                                                                                                 cgctgctGCACGACACGTCGCAGCACACACCCATATTTATCCCGTGCACCCAGCAGCCCTTTTTTCGCCAGTTCGCGATCCTGGTACAGACCGCGCAGTACCACTTCATCCGGATACAGCCCCAGGGTTTTGCCCAGCGTTAGAGCCCCGCACTCCCAGTAACCGCGCAGCGGTGGCAGGTCATGTGTCGCCGCAACCGCCATCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTa                                                                      <  2:244510/269‑1 (MQ=255)                                                                                                                                                                                   ctgaTGCCCGGCACGTTGCGGCAGACAACCATATTTTTGCAGTGCATCCAGCAGCCCTTGCTTCGCCAGTTCGCGATCCTGATACAGACCGCGCAGTACCACTTCATCCGGATACAGCCCCAGGGTTTTGCCCAGCGTTAGATCCCCGCACTCCCAGTAACCGCGCAGCGTTGGCAGGTCATGTGTCGCCGCAACCGCCATCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTa                                                                      <  1:153282/270‑1 (MQ=255)                                                                                                                                                                                            ggCACGTTTCGGCAGACAACCATATTTATGCAGTGCATCCAGCAGCCCTTGCTTCGCCAGTTCGCGATCCTGATACAGACCGCGCAGTACCACTTCATCCGGATACAGCCCCAGGGTTTTGCCCAGCGTTAGATccc                                                                                                                                                                                                     >  2:111104/1‑137 (MQ=255)                                                                                                                                                                                              cACGTTTCGGCAGACAACCATATTTATGCAGTGCATCCAGCAGCCCTTGCTTCGCCAGTTCGCGATCCTGATACAGACCGCGCAGTACCACTTCATCCGGATACAGCCCCAGGGTTTTGCCCAGCGTTAGATCCCCGCACTCCCAGTaa                                                                                                                                                                                       >  2:110547/1‑149 (MQ=255)                                                                                                                                                                                                cGTTTCGGCAGACAACCATATTTATGCAGTGCATCCAGCAGCCCTTGCTTCGCCAGTTCGCGATCCTGATACAGACCgcg                                                                                                                                                                                                                                                          >  2:239329‑M2/1‑77 (MQ=255)                                                                                                                                                                                                cGTTTCGGCAGACAACCATATTTATGCAGTGCATCCAGCAGCCCTTGCTTCGCCAGTTCGCGATCCTGATACAGACCGCGCAGTACCACTTCATCCGGATACAGCCCCAGGGTTTTGCCCAGCGTTAGATCCCCGCa                                                                                                                                                                                                 <  1:111105/137‑1 (MQ=255)                                                                                                                                                                                                  tttCGGCAGACAACCATATTTATGCAGTGCATCCAGCAGCCCTTGCTTCGCCAGTTCGCGATCCTGATACAGACCGCGCAGTACCACTTCATCCGGATACAGCCCCAGGGTTTTGCCCAGCGTTAGATCCCCGCACTCCCAGTAACcgc                                                                                                                                                                                   <  1:110548/149‑1 (MQ=255)                                                                                                                                                                                                                tagacttagggcgTGCATCCAGCAGCCCTTGCTTCGCCAGGTCGCGAGCCTGATACAGACCGCGCAGTACCACGTCAGCCGGAGACAGCCCCAGGGTTTTGCCCAGCGTTAGATCCCCGCACTCCCAGTAACCGCGCAGCGTTGGCAGGTCATGTGTCGCCGCAACCGCCATCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCg                                       <  2:27383/263‑1 (MQ=255)                                                                                                                                                                                                                      tATGCAGTGCATCCAGCAGCCCTTGCTTCGCCAGTTCGCGATCCTGATACAGACCgcgcagagctgcagcgaagaagaagtagagtgcggttgatgccggatgc                                                                                                                                                                                                            <  2:547438‑M2/104‑50 (MQ=255)                                                                                                                                                                                                                         gCAGTGCATCCAGCAGCCCTTGCTTCGCCAGTTCGCGATCCTGATACAGACCGCGCAGTACCACTTCATCCGGATACAGCCCCAGGGTTTTGCCCAGCGTTAGATccc                                                                                                                                                                                                     >  2:277673/1‑108 (MQ=255)                                                                                                                                                                                                                          cAGTGCATCCAGCAGCCCTTGCTTCGCCAGTTCGCGATCCTGATACAGACCgcgcagagctgcagcgaagaagaagtagagtgcggttgatgccggatgcgatg                                                                                                                                                                                                        >  1:547447‑M2/1‑51 (MQ=255)                                                                                                                                                                                                                            gTGCATCCAGCAGCCCTTGCTTCGCCAGTTCGCGATCCTGATACAGACCgcgcagagctgcagcgaagaagaagtagagtgcggttgatgccggatgcgat                                                                                                                                                                                                         <  2:445712‑M2/101‑53 (MQ=255)                                                                                                                                                                                                                             tGCATCCAGCAGCCCTTGCTTCGCCAGTTCGCGATCCTGATACAGACCGCGCAGTACCACTTCATCCg                                                                                                                                                                                                                                         >  1:713310/1‑68 (MQ=255)                                                                                                                                                                                                                             tGCATCCAGCAGCCCTTGCTTCGCCAGTTCGCGATCCTGATACAGACCGCGCAGTACCACTTCATCCGGATACAGCCCCAGGGt                                                                                                                                                                                                                         >  1:448615/1‑84 (MQ=255)                                                                                                                                                                                                                             tGCATCCAGCAGCCCTTGCTTCGCCAGTTCGCGATCCTGATACAGACCGCGCAGTACCACTTCATCCGGATACAGCCCCAGGGTTTTGCCCAGCGTTAGATCCCCGCa                                                                                                                                                                                                 <  1:277678/108‑1 (MQ=255)                                                                                                                                                                                                                             tGCATCCAGCAGCCCTTGCTTCGCCAGTTCGCGATCCTGATACAGACCGCGCAGTACCACTTCATCCGGATACAGCCCCAGGGTTTTGCCCAGCGTTAGATCCCCGCACTCCCAGTAACCGCGCAGCGTTGGCAGGTCATGTGTCGCCGCAACCGCCATCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATag                                                                                 >  1:115177/1‑220 (MQ=255)                                                                                                                                                                                                                                aTCCAGCAGCCCTTGCTTCGCCAGTTCGCGATCCTGATACAGACCgcgcagagctgcagcgaagaagaagtagagtgcggttgatgccggatgcgatgctt                                                                                                                                                                                                     >  1:445719‑M2/1‑45 (MQ=255)                                                                                                                                                                                                                                 tCCAGCCGCCCTTGCTTCGCCAGTTCGCGATCCTGATACAGACCGCGCAGTACCACTTCATCCGGATa                                                                                                                                                                                                                                     <  2:713300/68‑1 (MQ=255)                                                                                                                                                                                                                                 tCCAGCAGCCCTTGCTTCGCCAGTTCGCGATCCTGATACAGACCGCGCAGTACCACTTCATCCGGATACAGCCCCAGGGTTTTg                                                                                                                                                                                                                     <  2:448608/84‑1 (MQ=255)                                                                                                                                                                                                                                 tCCAGCAGCCCTTGCTTCGCCAGTTCGCGATCCTGATACAGACCGCGCAGTACCACTTCATCCGGATACAGCCCCAGGGTTTTGCCCAGCGTTAGATCCCCGCACTCCCAGTAACCGCGCAGCGTTGGCAGGTCATGTGTCGCCGCAACCGCCATCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCa                                                                             <  2:115176/220‑1 (MQ=255)                                                                                                                                                                                                                                   cagcagCCCTTGCTTCGCCAGTTCGCGATCCTGATACAGACCgcg                                                                                                                                                                                                                                                          >  2:87039‑M2/1‑42 (MQ=255)                                                                                                                                                                                                                                         cccTTGCTTCGCCAGTTCGCGATCCTGATACAGACCGCGCAGTACCACATCATCCGGATACAGCCCCAGGGTTTTGCCCAGCGTTAGATc                                                                                                                                                                                                       >  1:402856/1‑90 (MQ=255)                                                                                                                                                                                                                                           cTTGCTTCGCCAGTTCGCGATCCTGATACAGACCGCGCAGTACCACTTCATCCGGATACAGCCCCAGGGTGTAGCCCAGCGTTAGATCCCCGCa                                                                                                                                                                                                 <  1:511986/94‑1 (MQ=255)                                                                                                                                                                                                                                             tGCTTCGCCAGTTCGCGATCCTGATACAGACCGCGCAGTACCACTTCATCCTGATACAGCCCCAGGGTTTTGCCCAGCGTTAGATCCCCg                                                                                                                                                                                                   <  2:402849/90‑1 (MQ=255)                                                                                                                                                                                                                                                   gCCAGTTCGCGATCCTGATACAGACCGCGCAGTACCACTTCATCCGGATACAGCCCCAGGGTTTTGCCCAGCGTTAGATCCCCGCACTCCCAGTAACCGCGCAGCGTTGGCCGGTCATGTGTCGCCGCAACCGCCATCGACTGCTCCGGATACGCTTTCGGTGCGCGGAACGTCTTCTCGTGGNCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCAACCGATACGGAACCAAGACCCTCaac    >  1:526808/1‑273 (MQ=255)                                                                                                                                                                                                                                                     catttCTCGATTCTGTTACAGACCGCTCAGTACCACTTCATCCGGATACAGCCCCAGGGTTTTGCCCAGCGTTCGATCCCCGCACTCCCAGTAACCGCTCAGCGTTGGCAGGTCATGTGTCGCCGCAACCGCCATCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCAcc    <  1:36626/270‑1 (MQ=255)                                                                                                                                                                                                                                                     cAGTTCGCGATCCGGGTACAGACCGCGCAGTACCACTTCATCCGGATACAGCCCCAGGGTTTGTCCCAGCGTTAGATCCCCGCACTCCCAGTAACCGCGCAGCGTTGGCAGGTCATGTGTCGCCGCAACCGCCATCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCaa  <  1:424455/275‑1 (MQ=255)                                                                                                                                                                                                                                                                          aCCGCGCAGTACCACTTCATCCGGATACAGCCCCAGGGTTTTGCCCAGCGTTAGATCCCCGCACTCCCAGTAACCGCGCAGCGTTGGCAGGTCATGTGTCGCCGCAACCGCCATCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACttt                                                                         >  2:683501/1‑183 (MQ=255)                                                                                                                                                                                                                                                                          aCCGCGCAGTACCACTTCATCCGGATACAGCCCCAGGGTTTTGCCCAGCGTTAGATCCCCGCACTCCCAGTAACCGCGCAGCGTTGGCAGGTCATGTGTCGCCGCAACCGCCATCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAag                                                                    >  2:721735/1‑188 (MQ=255)                                                                                                                                                                                                                                                                          aCCGCGCAGTACCACTTCATCCGGATACAGCCCCAGGGTTTTGCCCAGCGTTAGATCCCCGCACTCCCAGTAACCGCGCAGCGTTGGCAGGTCATGTGTCGCCGCAACCGCCATCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGa                                      >  1:96220/1‑218 (MQ=255)                                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                            GCGTTGCGGAAAGCTTGCGTCGCCAGTTTTTATACTGGTAACTGGTGCCAGGAATATTCACCGGTTCGGCCATATCCAGCCAGTCTTCCGGCTGTAGTCCTAACAGAGCACTGTTACTGTCGGCAATGTAGCGCTGCAAACCACGGTTCAGCGTCGGCGTCATCGACATCAACGATGCCTTATGCCCGGCACGTTTCGGCAGACAACCATATTTATGCAGTGCATCCAGCAGCCCTTGCTTCGCCAGTTCGCGATCCTGATACAGACCGCGCAGTACCACTTCATCCGGATACAGCCCCAGGGTTTTGCCCAGCGTTAGATCCCCGCACTCCCAGTAACCGCGCAGCGTTGGCAGGTCATGTGTCGCCGCAACCGCCATCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAA  >  CP009273/3541431‑3541949

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.