New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 3815901	38 (0.990)	7 (0.190)	6/302	NT	12.3%	coding (142/2109 nt)	spoT	bifunctional (p)ppGpp synthetase II/ guanosine‑3',5'‑bis pyrophosphate 3'‑pyrophosphohydrolase
	?	CP009273	= 3816627	63 (1.700)					coding (868/2109 nt)	spoT	bifunctional (p)ppGpp synthetase II/ guanosine‑3',5'‑bis pyrophosphate 3'‑pyrophosphohydrolase

GAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTCGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGCGGCAGGCGTATCTCGTTGCACGTGATGCTCACGAGGGGCAAACACGTTCAAGCGGTGAACCCTATATCACGCACCCGGTAGCGGTTGCCTGCATTCTGGCCGAGATGAAACTCGACTATGAAACGCTGATGGCGGCGCTGCTGCATGACGTGATTGAAGATACTCCCGCCACCTACCAGGATATGGAACAGCTTTTTGGTAAAAGCGTCGCCGAGCTGGTAGAGGGGGTGTCGAAACTTGATAAACTCAAGTTCCGCGATAAGAAAGAGGCGCAGGCCGAAAACTTTCGCAAGATGATTATGGCGATGGTGCAGGATATCCGCGTCATCC  >  CP009273/3815667‑3816159                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                                   aaaCGCCATGAACGGCGATAGCAGGAAGCCGCTGCATTTCAAGCCGTTTCCGCTATTGTTGATGGTCGACTTTAATCACAAAGCGGGGCGCCCTTGTATCTGTTTGAAAGCCTGAATAAACTGATTCAAACCTACCTGGCGGAATACCAAATCAAGCGTTTGCGGCAGGCGTATCTCGTTGCACGTGATGCTCACGAGTGGCAAACACGTTCAAGCGGTGAACCCTATATCACGCACCCGGTAGCGGTTGCCTGCATTCTGGCCGAGATGaaa                                                                                                                                                                                                                              <  2:695490/272‑1 (MQ=255)       cAGGAAAAAGAAGAGCAGGAAGCCGATGAATTACCAGCCGTTACCGCTATTGCTGAAGGTCGTCGGTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAACCGACCTGCCGGAAGACCAAATCAAGCGTCTGCGGCAGGCGTATCTCGTTGCACGTGATGCTCACGAGGGGCAAACACGTTCAAGCGGTGAACCCTATATCACGCACCCGGTAGCGGTTGCCTGCATTCTGGCCGAGATGAAACTCGACt                                                                                                                                                                                                                       <  2:637976/274‑1 (MQ=255)                cAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTCGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGCGGCAGGCGTATCTCGTTGCACGTGATGCTCACGAGGGGCAAACACGTTCAAGCGGTGAACCCTATATCACTCACCCGGTAGCGGTTGCCTGCATTCTGGCCTAGATGAAACTCGCCTATGAAACg                                                                                                                                                                                                               >  1:230411/1‑273 (MQ=255)                        gagagacGCTGAATTACAAGACGTAGTCGCGATTGCTTGAAGTCTGCGTTAATCATAAAGCTGTTCGCACTTATAGCTGTTTGAAAACCTGAATCAACTGAGTCAAACAAACCTGCCGCAAGACCATAACTAGCGTCTGCGGCATGCGATCCTCGTGGCACGTGATTCTCTCGTCGTGCAAACACGTTCAAGCGGTGAATTCTATATCACGCACCCGGTAGCGGTTGCCTGCCTTCTGTCCGAGATGAAACTCGACTATGAAACGCTGATggcgg                                                                                                                                                                                                     <  2:215967/269‑1 (MQ=255)                                            cagTTACCGCAATTGCGGAAGGTCGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCCACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGCGGCAGGCGTATCTCGTTGCACGTGATGCTCACGAGGGGCAAACACGTTCAAGCGGTGAACCCTATATCACGCACCCGGTAGCGGTTGCCTGCATTCTGGCCGAGATGAAACTCGACTATGAAACGCTGATGGCGGCGCTGCTGCATGACGTg                                                                                                                                                                                    <  2:317391/270‑1 (MQ=255)                                             cGTTACCGCTATTGCTGAAGGTCGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGCGGCAGGCGTATCTCGTTGCACGTGATGCTCACGAGGGGCAAACACGTTCAAGCGGTGAACCCTATATCACGCACCCGGTAGCGGTTGCCTGCATTCTGGCCGAGATGAAACTCGACTATGAAACGCTGATGGCGGCGCTGCTGCATGACGTGAtt                                                                                                                                                                                 >  1:17358/1‑274 (MQ=255)                                                    gCTATTGCTGAAGGGCGTCGTTAATCACAAAGCGGATCGGCCTTGTATCTGTTTGAAAGCCTTAATCAACTGCTTCAAAACTACCTGCCGGAAGACCAAATAGAGCGTCTGCGGCAGGCGTATCGCGTTGCACGTGATGCTCACGAGGGGCAAACACGTTCAAGCGGTGAACCCTATATCACGCACCCGGTAGCGGTTGCCTGCATTCTGGCCGAGATGAAACTCGACTATGAAACGCTGATGGCGGCGCTGCTGCATGACGTGATTGAAGATa                                                                                                                                                                          <  2:230406/274‑1 (MQ=255)                                                       aTTGCTGAAGGTCGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCCACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGCGGCAGGCGTATCTCGTTGCACGTGATGCTCACGAGGGTAAAACACGTTCNAGCGGTGAACCCTATATCACGCACCCGGTAGCGGTTGCCTGCATTCTGGCCGAGATGAAACTCGACTAGAAAACGCTGATGGCGGCGCTGCTGCATGACGTGATAGAAGATACTca                                                                                                                                                                      >  1:657512/1‑274 (MQ=255)                                                       aTTGCTGAAGGTCGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGCGGCAGGCGTATCTCGTTGCACGTGATGCTCACGAGGGGCAAACACGTTCAAGCGGTGAACCCTATATCACGCACCCGGTAGCGGTTGCCTGCATTCTGGCCGAGATGAAACTCGACTATGAAACGCTGAGGGCGGCGCTGCGGCATGACGTTATTGAAGTTACTcc                                                                                                                                                                      >  2:612314/1‑275 (MQ=255)                                                                 accgtcgtGAATAACAAAGCGGGTCGCCCTTGTATCTGGTTGAAAGCCTGAATCCACTGATTAAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGCGGCAGGCGTATCTCGTTGCACGTGATGCTCACGAGGGGCAAACACGTTCAAGCGGTGAACCCTATATCACGCACCCGGTAGCGGTTGCCTGCATTCTGGCCGAGATGAAACTCGACTATGAAACGCTGATGGCGGCGCTGCTGCATGACGTGATTGAAGATACTCCCGCCACCTAc                                                                                                                                                            <  2:17358/273‑1 (MQ=255)                                                                   cgtcgtTAATCCCAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAACCGACCTGCCGGAAGACCNAATCAAGCNTCTGCGGCAGGCTTATCTCGTTGCACGTGATGCTCACGAGGGGCAAACACGTTCAAGCGGTGAACCCTATATCACGCACCCGGTAGCGGTTGCCTGCATTCTGGCCGAGATGAAACTCGACTATGAAACGCTGATGGCGGCGCTGCTGCATGACGTGATTGAAGATACTCCCGCCACCTACCa                                                                                                                                                          <  1:475020/275‑1 (MQ=255)                                                                                        tCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGCGGCAGGCGTATCTCGTTGCACGTGATGCTCACGAGGGGCAAACACGTTCAAGCGGTGAACCCTATATCACGCACCCGGt                                                                                                                                                                                                                                                             >  1:251640/1‑155 (MQ=255)                                                                                            ccTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGCGGCAGGCGTATCTCGTTGCACGTGATGCTCACGAGGGGCAAACACGTTCAAGCGGTGAACCCTATATCACGCACCCGGTAGCg                                                                                                                                                                                                                                                         <  2:251635/155‑1 (MQ=255)                                                                                                      gTTTGAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGCGGCAGGCGTATCTCGTTGCACGTGATGCTCACGAGGGGCAAACACGTTCAAGCGGTGAACCCTATATCACGCACCCGGTAGCGGTTGCCTg                                                                                                                                                                                                                                                 >  1:437318/1‑153 (MQ=255)                                                                                                      gTTTGAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGCGGCAGGCGTATCTCGTTGCACGTGATGCTCACGAGGGGCAAACACGTTCAAGCGGTGAACCCTATATCACGCACCCGGTAGCGGTTGCCTGCATTCTGGcc                                                                                                                                                                                                                                       >  1:114272/1‑163 (MQ=255)                                                                                                      gTTTGAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGCGGCAGGCGTATCTCGTTGCACGTGATGCTCACGAGGGGCAAACACGTTCAAGCGGTGAACCCTATATCACGCACCCGGTAGCGGATGCCTGCATTCTGGCCGAGATGAAACTCGACTATGAAACGCTGATGGCGGCGCTGCTGCAt                                                                                                                                                                                          >  1:666504/1‑208 (MQ=255)                                                                                                      gTTTAAAAGCGTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGCGGCAGGCGTATCTCGTTGCACGTGATGCTCACGAGGGGCAAACACGTTCAAGCGGTGAACCCTATATCACGCACCCGGTAGCGGTTGCCTGCCTTCTGGCCGAGATGCAACTCGAATATGAAACGCTGATGGCTGCGCTGATGCATGACGTGATTGAAGATACTCCAGCCCCCTACCAGGCTATAGAACAGCTTTTCGGTAAAAGCGTAGCCg                                                                                                                       >  1:723213/1‑275 (MQ=255)                                                                                                          gAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGCGGCAGGCGTATCTCGTTGCACGTGATGCTCACGAGGGGCAAACACGTTCAAGCGGTGAACCCTATATCACGCACCCGGTAGCGGTTGCCTGCAtt                                                                                                                                                                                                                                             <  2:437311/153‑1 (MQ=255)                                                                                                          gAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGCGGCAGGCGTATCTCGTTGCACGTGATGCTCACGAGGGGCAAACACGTTCAAGCGGTGAACCCTATATCACGCACCCGGTAGCGGTTGCCTGCATTCTGGCCgaga                                                                                                                                                                                                                                   <  2:114271/163‑1 (MQ=255)                                                                                                          gAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGCGGCAGGCGTATCTCGTTGCACGTGATGCTCACGAGGGGCAAACACGTTCAAGCGGTGAACCCTATATCACGCACCCGGTAGCGGTTGCCTGCATTCTGGCCGAGATGAAACTCGACTATGAAACGCTGATGGCGGCGCTGCTGCATGACg                                                                                                                                                                                      <  2:666495/208‑1 (MQ=255)                                                                                                                        aCTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGCGGCAGGCGTATCTCGTTGCACGTGATGCTCACGAGGGGCAAACACGTTCAAGAGGTGAACCCTATATCAAGCACCCGGTAGCGGTTGCCTGCATTCTGGTCGAGATGAAAACCGACTATGACACGATGATGGCGGCGCGGCTGCATGACGTGATTGAAGAAACTACCGCCACCTACCAGGATATGGAAAAGCTTTTTGGTAAAAGCTGCCCGGAGCTGGAAGAGGGGgtgc                                                                                                     >  2:18164/1‑274 (MQ=255)                                                                                                                                      acctGCCGGAAGACCAAATCAAGCGTCTGCGGCAGGCGTATCTCGTTGCACGTGATGCTCACGAGGGGCAAACACGTTCAAGCGGTGAACCCTATATCACGCACCCGGTAGCGGTTGCCTGCATTCt                                                                                                                                                                                                                                           >  1:637321/1‑127 (MQ=255)                                                                                                                                          gCCGGAAGACCAAATCAAGCGTCTGCGGCAGGCGTATCTCGTTGCACGTGATGCTCACGAGGGGCAAACACGTTCAAGCGGTGAACCCTATATCACGCACCCGGTAGCGGTTGCCTGCATTCTGGcc                                                                                                                                                                                                                                       <  2:637312/127‑1 (MQ=255)                                                                                                                                                            gCGTCTGCGGCAGGCGTATCTCGTTGCACGTGATGCTCACGAGGGGCAAACACGTTCAAGCGGTGAACCCTATATCACGCACCCGGTAGCGGTTGCCTGCATTCTGGCCGAGATGAAACTCGACTATGAAACGCTGATGGCGGCGCTGCTGCATGACGTGATCGAAGATACTCCCGCCACCTACCAGGATATGGAACAGCTTTTTGGTAAAAGCGTCGCCGAGCTGGTAGAGGGGGTGTCGAAACTTGATAAACTCAAGTTCCGCTATaagaaag                                                                 >  1:139703/1‑275 (MQ=255)                                                                                                                                                                                   ttGCACGTGATGCTCACGAGGGGCAAACACGTTCAAGCGGTGAACCCTATATCACGCggcccggacgcggcttgtacaggctgtgcatctggcccagcacgcgataacaggtgtcagaatcattgacgatcacgcggaaagcgtagatgtccatgatcgagtgaaaacgctgctctttgagcaccattttgcagtaaatcgaataaagatgcttcacgcgaccactgacgcggcacggtattcccgcttcctgcaaacgcccttccatttcaca                                           >  1:25770‑M1/1‑57 (MQ=255)                                                                                                                                                                                   ttGCACGTGATGCTCACGAGGGGCAAACACGTTCAAGCGGTGAACCCTATATCACGCggcccggacgcggcttgtacaggctgtgcatctggcccagcacgcgataacaggtgtcagaatcattgacgatcacgcggaaagcgtagatgtccatgatcgagtgaaaacgctgctctttgagcaccattttgca                                                                                                                            >  1:379108‑M1/1‑57 (MQ=255)                                                                                                                                                                                   ttGCACGTGATGCTCACGAGGGGCAAACACGTTCAAGCGGTGAACCCTATATCACGCACCCGGTAGCGGTTGCCTGCATTc                                                                                                                                                                                                                                            >  1:204894/1‑81 (MQ=255)                                                                                                                                                                                   ttGCACGTGATGCTCACGAGGGGCAAACACGTTCAAGCGGTGAACCCTATATCACGCACCCGGTAGCGGTTGCCTGCATTCTGGCCGAGATGAAACTCGACTATGAAACGCTGATg                                                                                                                                                                                                         >  2:298811/1‑116 (MQ=255)                                                                                                                                                                                   ttGCACGTGATGCTCACGAGGGGCAAACACGTTCAAGCGGTGAACCCTATATCACGCACCCGGTAGCGGTTGCCTGCATTCTGGCCGAGATGAAACTCGACTATGAAACGCTGATGGCGGCGCTGCTGCATGACGTGATTGAAGATACTccc                                                                                                                                                                     >  2:374548/1‑152 (MQ=255)                                                                                                                                                                                   ttGCACGTGATGCTCACGAGGGGCAAACACGTTCAAGCGGTGAACCCTATATCACGCACCCGGTAGCGGTTGCCTGCATTCTGGCCGAGATGAAACTCGACTATGAAACGCTGATGGCGGCGCTGCTGCATGACGTGATTGAAGATACTcc                                                                                                                                                                      >  1:665125/1‑151 (MQ=255)                                                                                                                                                                                    tGCACGTGATGCTCACGAGGGGCAAACACGTTCAAGCGGTGAACCCTATATCACGCggcccggacgcggcttgtacaggctgtgcatctggcccagcacgcgataacaggtgtcagaatcattgacgatcacgcggaaagcgtagatgtccatg                                                                                                                                                                  >  2:315207‑M1/1‑56 (MQ=255)                                                                                                                                                                                       aCGTGATGCTCACGAGGGGCAAACACGTTCAAGCGGTGAACCCTATATCACGCggcccggacgcggcttgtacaggctgtgcatctggcccagcacgcgataacaggtgtcagaatcattgacgatcacgcggaaagcgtagatgtccatgatcgagtgaaaacgctgctctttgagcaccattttgcagtaa                                                                                                                        <  2:379102‑M1/193‑141 (MQ=255)                                                                                                                                                                                       aCGTGATGCTCACGAGGGGCAAACACGTTCAAGCGGTGAACCCTATATCACGCACCCGGTAGCGGTTGCCTGCATTCTGGc                                                                                                                                                                                                                                        <  2:204890/81‑1 (MQ=255)                                                                                                                                                                                       aCGTGATGCTCACGAGGGGCAAACACGTTCAAGCGGTGAACCCTATATCACGCACCCGGTAGCGGTTGCCTGCATTCTGGCCGAGATGAAACTCGACTATGAAACGCTGATggcgg                                                                                                                                                                                                     <  1:298817/116‑1 (MQ=255)                                                                                                                                                                                       aCGTGATGCTCACGAGGGGCAAACACGTTCAAGCGGTGAACCCTATATCACGCACCCGGTAGCGGTTGCCTGCATTCTGGCCGAGATGAAACTCGACTATGAAACGCTGATGGCGGCGCTGCTGCATGACGTGATTGAAGATACTCCCGCCa                                                                                                                                                                 <  1:374554/152‑1 (MQ=255)                                                                                                                                                                                       aCGTGATGCTCACGAGGGGCAAACACGTTCAAGCGGTGAACCCTATAGCACGCACCCGGTAGCGGTTGCCTGCATTCTGGCCGAGATGAAACTCGACTATGAAACGCTGATGGCGGCGCTGCTGCATGACGTGATTGAAGATACTCCCGcc                                                                                                                                                                  <  2:665116/151‑1 (MQ=255)                                                                                                                                                                                        cGTGATGCTCACGAGGGGCAAACACGTTCAAGCGGTGAACCCTATATCACGCggcccggacgcggcttgtacaggctgtgcatctggcccagcacgcgataacaggtgtcagaatcattgacgatcacgcggaaagcgtagatgtccatgatcg                                                                                                                                                              <  1:315213‑M1/154‑103 (MQ=255)                                                                                                                                                                                           gATGCTCACGAGGGGCAAACACGTTCAAGCGGTGAACCCTATATCACGCACCCGGTAGCGGTTGCCTGCATTCTGGCCGAGATGAAACTCGACTATGAAACGCTGATggc                                                                                                                                                                                                       >  1:393329/1‑110 (MQ=255)                                                                                                                                                                                               cTCACGAGGGGCAAACACGTTCAAGCGGTGAACCCTATATCACGCACCCGGTAGCGGTTGCCTGCATTCTGGCCGAGATGAAACTCGACTATGAAACGCTGATGgcggcg                                                                                                                                                                                                   <  2:393323/110‑1 (MQ=255)                                                                                                                                                                                                   cGAGGGGCAAACACTTTCAAGCGGTGAACCCTGTATGTCGCACCCGATAGCGTTTGCCGGCATTCTGGCCTAGATGGAACTCGACTAGGAAACGCTGATGGCGGCGCTGCTGAATGACGTGATTGAAGATACTCCCGCCACCTACCAGGATATGGAACAGCTTTTTGGTAAAAGCGTCGCCGAGCTGGTAGATGGGGTGTCGAAACTTGATAAACTCAAGTTCCGCGATAAGAAAGAGGCGCAGGCCGAAAACTTGCGCAAGATGATTATGGCGa                          <  1:269313/275‑1 (MQ=255)                                                                                                                                                                                                                cGTTCAAGCGGTGAACCCTATATCACGCggcccggacgcggcttgtacaggctgtgcatctggcccagcacgcgataacaggtgtcagaatcattgacgatcacgcggaaagcgtagatgtccatgatcgagtgaaaacgctgctctttgagcaccattttgcagtaaatcgaataaagatgcttctcgcgaccactgacgcggcacggt                                                                              >  1:40125‑M1/1‑28 (MQ=255)                                                                                                                                                                                                                    cAAGCGGTGAACCCTATATCACGCggcccggacgcggcttgtacaggctgtgcatctggcccagcacgcgataacaggtgtcagaatcattgacgatcacgcggaaagcgtagatgtccatgatcgagtgaaaacgctgctctttgagcaccattttgcagtaaatcgaataaagatgcttctcgcgaccactgacgcggcacggtattc                                                                          <  2:40125‑M1/210‑187 (MQ=255)                                                                                                                                                                                                                           tGAACCCTATATCACGCACCCGGTAGCGGTTGCCTGCATTCTGGCCGAGATGAAACTCGACTATGAAACGCTGATGGCGGCGCTGCTGCATGACGTGATTg                                                                                                                                                                                >  2:446740/1‑101 (MQ=255)                                                                                                                                                                                                                           tGAACCCTATATCACGCACCCGGTAGCGGTTGCCTGCATTCTGGCCGAGATGAAACTCGACTATGAAACGCTGATGGCGGCGCTGCTGCATGACGTGATTGAAGATACTCCCGCCACCTACCAGGATATGGAACAGCTTTTTGGTAAAAGCGTCGCCGAGCTGGTAGAGGCGGTGTCGAAACTNGATAAACTNAAGTTCCGCGATAAGAAAGAGGCGCAGGCCGAAAACTTTCGCAAGATGATTATGGCGATGGTGCAGGATATCCGCGTCATcc  >  1:474699/1‑275 (MQ=255)                                                                                                                                                                                                                               cccTATATCACGCACCCGGTAGCGGTTGCCTGCATTCTGGCCGAGATGAAACTCGACTATGAAACGCTGATGGCGGCGCTGCTGCATGACGTGATTGAAGa                                                                                                                                                                            <  1:446747/101‑1 (MQ=255)                                                                                                                                                                                                                                         cGCACCCGGTAGCGGTTGCCTGCATTCTGGCCGAGATGAAACTCGACTATGAAACGCTGATGGCGGCGCTGCTGCAt                                                                                                                                                                                          >  1:248214/1‑77 (MQ=255)                                                                                                                                                                                                                                         cGCACCCGGTAGCGGTTGCCTGCATTCTGGCCGAGATGAAACTCGACTATGAAACGCTGATGGCGGCGCTGCTGCATGACGTGATTGAAGATACTCCCGCCACCTACCAGGATATGGAACAGCTTTTTGGTAAAAGCGTCGCCGAGCTGGTAGAGGGGGTGTCGAAACTTGATAAACTCAAGTTCCGCGATAAGAAAGAGGCGCAGGCCGAAAACTTTCGCAAGATGATTATg                              >  1:274901/1‑233 (MQ=255)                                                                                                                                                                                                                                         cGCACCCGGTAGCGGTTGCCTGCATTCTCTCCGAGATGAAACTCGACTATGAAACGCTGATGGCGGCGCTGCTGCATGACGTGATTGAAGATACtac                                                                                                                                                                      >  1:512252/1‑95 (MQ=255)                                                                                                                                                                                                                                         cGCACCCGGTAGCGGCTGCCTTCATTCTGGCCGAGATGAAACTCGACTATGAAACGCTGATGGCGGCGCTGCTGCATGACGTGATTGAAGATACTCCCGCCACCTACCAGGATATGGAACAGCTTTTTGGTAAAAGCGTCGc                                                                                                                         >  1:511511/1‑142 (MQ=255)                                                                                                                                                                                                                                          gCACCCGGTAGCGGTTGCCTGCATTCTGGCCGAGATGAAACTCGACTATGAAACGCTGATGGCGGCGCTGCTGCATGACGTGATTGAAGATACTCCCGCCACCTACCAGGATATGGAACAGCTTTTTGGTAAAAGCGTCGCCGAGCTGGTAGAGGGGGTGTCGAAACTTGATAAACTCAAGTTCCGCGATAAGAAAGAGGCGCAGGCCGAAAACTTTCGCAAgatgct                                  >  2:587707/1‑226 (MQ=255)                                                                                                                                                                                                                                          gCACCCGGTAGCGGTTGCCTGCATTCTGGCCGAGATGAAACTCGACTATGAAACGCTGATGGCGGCGCTGCTGCATGACGTGATTGAAGATACTCCCGCCACCTACCAGGATATGGAACAGCTTTTTGGTAAAAGCGTCGCCGAGCTGGTAGAGGGGGTGTCGAAACTTGATAAACTCAAGTTCCGCGATAAGAAAGAGGCGCAGGCCGAAAACTTTCGCAAga                                      >  2:116617/1‑224 (MQ=255)                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                                   GAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTCGTCGTTAATCACAAAGCGGGTCGCCCTTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGCGGCAGGCGTATCTCGTTGCACGTGATGCTCACGAGGGGCAAACACGTTCAAGCGGTGAACCCTATATCACGCACCCGGTAGCGGTTGCCTGCATTCTGGCCGAGATGAAACTCGACTATGAAACGCTGATGGCGGCGCTGCTGCATGACGTGATTGAAGATACTCCCGCCACCTACCAGGATATGGAACAGCTTTTTGGTAAAAGCGTCGCCGAGCTGGTAGAGGGGGTGTCGAAACTTGATAAACTCAAGTTCCGCGATAAGAAAGAGGCGCAGGCCGAAAACTTTCGCAAGATGATTATGGCGATGGTGCAGGATATCCGCGTCATCC  >  CP009273/3815667‑3816159

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.