New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 3815901	38 (0.990)	7 (0.190)	6/302	NT	12.3%	coding (142/2109 nt)	spoT	bifunctional (p)ppGpp synthetase II/ guanosine‑3',5'‑bis pyrophosphate 3'‑pyrophosphohydrolase
	?	CP009273	= 3816627	63 (1.700)					coding (868/2109 nt)	spoT	bifunctional (p)ppGpp synthetase II/ guanosine‑3',5'‑bis pyrophosphate 3'‑pyrophosphohydrolase

CAACCGTAAAGAGATGATCCAGAAGATTCTTTCTGAAATCGAAGGGCGTTTGCAGGAAGCGGGAATACCGTGCCGCGTCAGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTCACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGCACACCTCGATGATCGGCCCGCACGGTGTGCCGGTTGAGGTCCAGATCCGTACCGAAGATATGGACCAGATGGCGGAGATGGGTGTTGCCGCGCACTGGGCTTATAAAGAGCACGGCGAAACCAGTACTACCGCACAAATCCGCGCCCAGCGCTGGATGCAAAGCCTGCTGGAGCTGCAACAGAGCGCCGGTAGTTCGTTTGAATTTATCGAGAG  >  CP009273/3816380‑3816892                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                                          cAACCGTAAAGAGATGATCCAGAAGATTCTTTCTGAAATCGAAGGGCGTTGGCAGGAAGCGGGAATACCGTGCCGCGTCAGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTCACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGATAGACTATATCGCCATTCCa                                                                                                                                                                                                                                                 <  1:592303/274‑1 (MQ=255)       tAAAGAGATGATCCAGAAGATTCTTTCTGAAATCGAAGGGCGTTTGCAGGAAGCGGGAATACCGTGCCGCGTCAGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTCACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAg                                                                                                                                                                                                                                             >  1:120456/1‑272 (MQ=255)          aggtatgaagggcaagaTGCTTTCTGAAAGCGAAGGGCGTTTGAAGGAAGCGGGAATACCGTGCCGCGTCAGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTCACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAAc                                                                                                                                                                                                                                        <  2:138993/261‑1 (MQ=255)              atgatCCAGAAGATTCTTTCTGAAATCGAAGGGCGTTTGCAGGAAGCGGGAATACCGTGCCGCGTCAGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTCACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGAATATATCGACATTCCAAAAGCGAACGGca                                                                                                                                                                                                                                    >  1:437821/1‑273 (MQ=255)              atgatCCAGAAGATACTTTCTGAAATCGAAGGGCGTTTGCAGGCAGCGGCAATACCGTGCCGCGTCAGCGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTCACTCGATCATGGACATCTACGCTTTACGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACACGCCGCGTCCGGGCCGCGTGAACGACTATATCGCCATCTCAAANNCGAACGGCt                                                                                                                                                                                                                                    >  2:52327/1‑274 (MQ=255)               tgatCCAGAAGATTCTGTCTGAAATCGAAGGGCGTTTGCAGGAAGCGGGAATACCGTGCCGCGTCAGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTCACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTNTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCAAAAAGCGAACGGCTa                                                                                                                                                                                                                                   >  1:534251/1‑274 (MQ=255)                 atCCAGAAGATTCTTTCTGAAATCGAAGGGCGTTTGCAGGAAGCGGGAATACCGTGCCGCGTCAGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTCACTCGATCATGGACATCTATGCTTTACGCGTGATCGTCAATACTTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCCCAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCACCATTCCAAAACCGAACGACTATc                                                                                                                                                                                                                                 >  1:620828/1‑274 (MQ=255)                            tctttctGAAATCGAAGGGCGTTTGCAGGAAGCGGGAATACCGTGCCGCGTCAGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTCACTCGCTCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCCTCCGGGCCGCGTGAAAGACTATATCGCCATTCCACAATCCACCGGCCNTCAGTCGTTGcac                                                                                                                                                                                                                      >  2:516147/1‑274 (MQ=255)                                tgtgaAATGGAAGGGCGTTTGCAGGAAGCGGGAATACCGTGCCGCGTCAGTGGTCGCGTGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTCACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCgcgtgatatagggttcaccgcttgaacgtgtttgcccctcgtgagcatcacgtgcaa                                                                                                                                                                                                                  >  1:25770‑M2/3‑217 (MQ=255)                                  tGAAATAGAAGGGAGTTTGAAGGTCGCGGGAATACCGTGCCGCGTAAGTGGTCGCGAGAAGCATCTTTATTCGATTGACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTCACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAg                                                                                                                                                                                                                                                                  <  1:160199/224‑1 (MQ=255)                                      atggAAGGGCGTTTGCAGGAAGCGGGAATACCGTGACGCGGCAGTGGTCGCGAGAAGCATTTTTATTCGATTTACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTCACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGCACACCTCgatga                                                                                                                                                                                                            <  1:424067/271‑1 (MQ=255)                                      aTCGAAGGGCGTTTGCAGGAAGCGGGAATACCGTGCCGCGTCAGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTCACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGCACACCTCgatga                                                                                                                                                                                                            <  1:241420/274‑1 (MQ=255)                                                gttcgccgcgagggggAATCCCTTGCCGCGTCCGTGTTCGCGAGAAGCTTCTTTTTTCGTTTTACTGCCAAATGGTGCTCAAAGAGCAGCTTTTTCACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGCACACCTCGATGATCGGCCCGCAc                                                                                                                                                                                                 <  2:120455/262‑1 (MQ=255)                                                       ggAAGCGGGAATACCGTGCCGCGTCAGTGGTCGCGAGAAGCATCTTTATTCGAGTTACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTCACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGCACACCTCGATGATCGGCCCGCACGGTGTGc                                                                                                                                                                                          <  1:417523/275‑1 (MQ=255)                                                              cgcaTACCGTGCCGCGTCCGTGGGCGCCGGACGCATCTTTAGTCGATTTACTGCAAAATGGTGGTCAAAGAGAAGCGTTTTCACTCGATCATGGCCATCTACGCTTTCCGCGTGATCGTCAAGGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGCACACCTCGATGATCGGCCCGCACGGTGTGCCGGTTg                                                                                                                                                                                    <  2:181565/271‑1 (MQ=255)                                                               gAATACCGTGCCGCGTCAGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTCACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCgcgtgatatagggttcaccgcttg                                                                                                                                                                                                                                                   <  2:40125‑M2/210‑25 (MQ=255)                                                                  tACCGTGCCGCGTCGGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTCACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGCACACCTCGATGATCGGCCCGCACGGTGTGCCGGTTGAGGTc                                                                                                                                                                               <  1:52327/275‑1 (MQ=255)                                                                   aCCGTGCCGCGTCAGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTCACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCgcgtgatatagggttcaccgcttgaacg                                                                                                                                                                                                                                               >  1:40125‑M2/1‑182 (MQ=255)                                                                   aCCGGGGCGCGTCAGTGGTCGCGAGAAGCATCTTTAGTCGATTTACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTCACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGCACACCTCGATGATCGGCCCGCACGGTGTGCCGGTTGAGGTc                                                                                                                                                                               <  2:286201/274‑1 (MQ=255)                                                                                       gcgAGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTCACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAGAGACTATATCGCCATTCCAAAAGCGACCGGCTAt                                                                                                                                                                                                                                  >  2:490180/1‑203 (MQ=255)                                                                                           gaAGCATCTTTATTCGATTNCCTGCAAAATGTTGCTCAAAGAGCAGCGTTTTCACTCGATCATGGACAGCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAGAGACTATATCGCCCATCCAAAACCGAACGGCTATCAGt                                                                                                                                                                                                                              <  1:490187/203‑1 (MQ=255)                                                                                                       ttCGATGTACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTCACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACNCCTGTTATCGCGTGCTGGGTCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGCACACCTCGATGATCGGCCCGCACGGTGTGCCGGTTGAGGTCCAGATCCGTACCGAAGATATGGACCAGATGGCGgaga                                                                                                                                          <  1:540138/275‑1 (MQ=255)                                                                                                             ttACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTCACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCgcgtgatatagggttcaccgcttgaacgtgtttgcccctcgtgagcatcacgt                                                                                                                                                                                                                      <  2:379102‑M2/193‑54 (MQ=255)                                                                                                                 tGCAAAATGGTGCTCAAAGAGCAGCGTTTTCACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCgcgtgatatagggttcaccgcttgaacgtgtttgcccctcgtgagcatcacgtgcaa                                                                                                                                                                                                                  >  1:379108‑M2/1‑136 (MQ=255)                                                                                                                          gTGCTCTAAGAGCAGCGTTTTCACTCTATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGCACACCTCGATGATCGGCCCGCACGGTGTGCCGGTTGAGGTCCAGATCCGTACCGAAGATATGGACCAGATGGCGGAGATGGGTGTTGCCGCGCACTg                                                                                                                       <  1:14233/275‑1 (MQ=255)                                                                                                                             cTCAAAGAGCAGCGTTTTCACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGCACACCTCGATGATCGGCCCGCACGGTGTGCCGGTTGAGTTcc                                                                                                                                                                              >  1:432346/1‑217 (MQ=255)                                                                                                                                          gTTTTCACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGCACACCTCGATGATCGGCCCGCACGGTGTGCCg                                                                                                                                                                                        >  2:71846/1‑194 (MQ=255)                                                                                                                                              tCACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGCACACCTCGATGATCGGCCCGCACGGTGTGCCGGTTg                                                                                                                                                                                    <  1:71847/194‑1 (MQ=255)                                                                                                                                                   cGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCTTGCTGGGCTAGATGCACAGCCTGTACCAGCCGCGTCCGGGCCGCGTGAAAGACTATCTCGCCATTCCAAATGCCAAAGACTATCAGTCTTTGCACCCCACg                                                                                                                                                                                                                >  2:85065/1‑161 (MQ=255)                                                                                                                                                   cGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCgcgtgatatagggttcaccgcttgaacgtgtttgcccctcgtgagcatcacg                                                                                                                                                                                                                       <  1:315213‑M2/154‑53 (MQ=255)                                                                                                                                                       cATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCgcgtgatatagggttcaccgcttgaacgtgtttgcccctcgtgagcatcacgtgca                                                                                                                                                                                                                   >  2:315207‑M2/1‑98 (MQ=255)                                                                                                                                                       cATGGACATCTACGCCTTCCGCGTGATCGTAAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGTGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGCACACCTCgatga                                                                                                                                                                                                            <  1:85066/161‑1 (MQ=255)                                                                                                                                                              aTCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGAGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGCACACCTCGATGATCGGCCCGCACGGTGTGGCGGTTGAGGTCCAGATACGTACCGAAGATATTGACCAGATGGCGGAGATGGGTGTTGACGAGAACTGGGCTTATAAAGAGCACGGCTAAACCAAtaaaaacac                                                                                   >  1:342998/1‑268 (MQ=255)                                                                                                                                                                 tACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCtt                                                                                                                                                                                                                           >  2:137811/1‑136 (MQ=255)                                                                                                                                                                     cTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGca                                                                                                                                                                                                                       <  1:137812/136‑1 (MQ=255)                                                                                                                                                                                aTCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGCACACCTCGATGATCGGCCCGCACGGTGTGCAGGTTGAGGTCCAGATCCGTACAGAAGATATGGACCAGATGACGGAGATGGGTGTTGCCGCGCAATGGGCTTATAAAGAGCACGGAGAAACCAGTACAAACGCACACATCAGCGCCCAgc                                                                  >  1:674919/1‑274 (MQ=255)                                                                                                                                                                                  cGTCAATGATTCTGACACCTGTTATCTCGTGCTGCGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGCACACCTCGATGATCGGCCCGCACGgt                                                                                                                                                                                              >  1:472907/1‑148 (MQ=255)                                                                                                                                                                                    tCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGCACACCTCGATGATCGGCCCGCACGGTGTGCCGGTTGAGGTCCAGATCCGTACCGAAGATATGGACCAGATGGCGGAGATGGGTGTTGCcgc                                                                                                                             >  2:430522/1‑211 (MQ=255)                                                                                                                                                                                      aaTGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGCACACCTCGATGATCGGCCCGCACGGTGTGc                                                                                                                                                                                          <  2:472900/148‑1 (MQ=255)                                                                                                                                                                                        tGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGCACACCTCGATGATCGGCCCGCACGGTGTGCCGGTTGAGGTCCAGATCCGTACCGAAGATATGGACCAGATGGCGGAGATGGGTGTTGCCGCGCAc                                                                                                                         <  1:430529/211‑1 (MQ=255)                                                                                                                                                                                            tCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGCACACCTCGATGATCGGCCCGCACGGTGTGCCGGTTGAGGTCCAGATCCGTACCGAAGATATGGACCAGATGGCGGAGATGGGTGTTGCCgcgc                                                                                                                           >  1:68988/1‑205 (MQ=255)                                                                                                                                                                                             cTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCtt                                                                                                                                                                                                                           >  2:61940/1‑108 (MQ=255)                                                                                                                                                                                              tGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGCACACCTCGATGATCGGcc                                                                                                                                                                                                      >  2:665011/1‑128 (MQ=255)                                                                                                                                                                                                acacCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGCACACCTCGATGATCGGCCCGCACGGTGTGCCGGTTGAGGTCCAGATCCGTACCGAAGATATGGACCAGATGGCGGAGATGGGTGTTGCCGCGCACTg                                                                                                                       <  2:68987/205‑1 (MQ=255)                                                                                                                                                                                                 cacCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGca                                                                                                                                                                                                                       <  1:61941/108‑1 (MQ=255)                                                                                                                                                                                                  acCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGCACACCTCGATGATCGGCCCGCa                                                                                                                                                                                                  <  1:665020/128‑1 (MQ=255)                                                                                                                                                                                                      gTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGCACACCTCGATGATCGGCCCGCACGGTGTGCCGGTTGAGGTCCAGATCCGTACCGAANATATGGACCAGATGGCGGAGATGGGTGtt                                                                                                                                  >  1:648855/1‑188 (MQ=255)                                                                                                                                                                                                          tCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGCACACCTCGATGATCGGCCCGCACGGTGTGCCGGTTGAGGTCCAGATCCGTACCGAAGATATGGACCAGATGGCGGAGATGGGTGTTGCcg                                                                                                                              <  2:648846/188‑1 (MQ=255)                                                                                                                                                                                                              gTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGCACACCTCGATGATCGGCCCGCACGGTGTGCCGGTTGAGGTcc                                                                                                                                                                              >  2:44212/1‑136 (MQ=255)                                                                                                                                                                                                               tGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGCACACCTCGATGATCGGCCCGCACGGTGTGCCGGGTGAGGTCCAGATCCGTACCGAAGata                                                                                                                                                            >  2:212384/1‑153 (MQ=255)                                                                                                                                                                                                                 cTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGCACACCTCGATGATCGGCCCGCACGGTGTGCCGGTTGAGGTCCAGATCCGTACCGCAGATATGGCCCAGATGGCGGAGATGGGTGTTGCCGCGCACTGGGCTTATAAAGAGCACTGCGAAACACGTACTACCGCACAAATCCGCGCCCAGCGCTGGGTGCAAAGCCCGCTGGAGCTGCGActcca                                >  2:183563/1‑271 (MQ=255)                                                                                                                                                                                                                 cTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGCACACCTCGATGATCGGCCCGCACGGTGTGCCGGTTGAGGTCCAGATCCGTACCGAAGATATGGACCAGATGGAGGAGATGGGTGTTGCCGCGNACTGGGCTTATAAAGAGCACGGCGAAACCAGTACTACCGCACAAATCCGCGACTAGCGCGGGATGCAAAGCCTGACGGAGCAGCAACagag                                >  1:544306/1‑275 (MQ=255)                                                                                                                                                                                                                  tGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGCACACCTCGATGATCGGCCCGCACGGTGTGCCGGTTGAGGTCCAGAt                                                                                                                                                                          <  1:44212/136‑1 (MQ=255)                                                                                                                                                                                                                   gggCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGCACACCTCGATGATCGGCCCGCACGGTGTGCCGGTTGAGGTCCAGATCCGTACCGAAGATATGGa                                                                                                                                                        <  1:212388/153‑1 (MQ=255)                                                                                                                                                                                                                         gATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGCACACCTCGATGATCGGCCCGCACGGTGTGCCg                                                                                                                                                                                        >  2:178493/1‑115 (MQ=255)                                                                                                                                                                                                                             cacaGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGCACACCTCGATGATCGGCCCGCACGGTGTGCCGGTTg                                                                                                                                                                                    <  1:178496/115‑1 (MQ=255)                                                                                                                                                                                                                                    tGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCAt                                                                                                                                                                                                                                                     >  2:86218/1‑43 (MQ=255)                                                                                                                                                                                                                                     gTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGCACACCTCGATGATCGGCCCGCACGGTGTGCCGGTTGAGGTCCAGATCCGTACCGAAGATATGGACCAGATGGCGGAGATGGGTGTTGCCGCGCACTGGGCTTATAAAGAGCACGGCGAAACCAGt                                                                                           >  1:572701/1‑196 (MQ=255)                                                                                                                                                                                                                                      tACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGc                                                                                                                                                                                                                                     >  1:241345/1‑57 (MQ=255)                                                                                                                                                                                                                                        cAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCa                                                                                                                                                                                                                                                 <  1:86219/43‑1 (MQ=255)                                                                                                                                                                                                                                         aaGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGCACACCTCGATGATCGGCCCGCACGGTGTGCCGGTTGAGGTCCAGATCCGTACCGAAGATATGGACCAGATGGCGGAGATGGGTGTTGCCGCGCACTGGGCTTATAAAGAGCACGGCGAAACCAGtacta                                                                                       <  2:572692/196‑1 (MQ=255)                                                                                                                                                                                                                                          aGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGGACGGCTATCAGTCtt                                                                                                                                                                                                                           >  1:680403/1‑63 (MQ=255)                                                                                                                                                                                                                                           gCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCCTTCCACAAGCGAACGGCTATCAGTCTTTGCACACCTCGATGATCGGCCCGCACGGTGTGCCg                                                                                                                                                                                        >  1:550888/1‑97 (MQ=255)                                                                                                                                                                                                                                           gCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGCACACCTCGATGATCGGCCCGCACGGTGTGCCGGTTGAGGTCCAGATCCGTACCGAAGATATGGACCAGATGGCGGAGATGGGTGTTGCCGCGCACTGGGCTTATAAAGAGCACGGCGAAACCAGTACTAAGGCACAAATCCGCGCCCAGCGCTGGATGCAAAGCCTGCTGGAGCTGCAACAGAGCGCCGATACTTCGTTTGAATTTATCg      >  1:707014/1‑275 (MQ=255)                                                                                                                                                                                                                                            ccGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGCACACCTCGATGATCGGCCCg                                                                                                                                                                                                    >  1:278255/1‑84 (MQ=255)                                                                                                                                                                                                                                            ccGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGCACACCTCGATGATCGGCCCGCACGGTGTGCCGGTTGAGGTCCAGATCCGTACCGAAGATATGGACCAGATGGCGGAGATGGGTGTTGCCGCGCACTGGGCTTATAAAGAGCACGGGGAAACCAGTACTACCGCACCAATCCGCGCCCAGCGCGGGATGCAAAACCTGCTGGAGATGCAACCAAGAGCCGGTAGTTCGTTTAAATGTagaga     >  1:175133/1‑271 (MQ=255)                                                                                                                                                                                                                                             agcgTCCGTGCGGCGTGAAAGCCTACGTCGCCATTCCAATAGCGATCGTCTATCAGTCTTTGCACACCTGAATGTTCGGCCCTCACGGTGTGCCGGTTGAGGGCCAGATCCGGACCGAAGATATGGACCAGATGGCGGAGATGGGTGTTGCCGCGCACTGGGCTTAGAAAGAGCACGGCGAAACCAGTACTACCGTACAAATCCGCGCCCAGCGCTGGATGCAAAGCCTGCTGGAGCTGCAACAGAGCGCCGGTAGTTCGTTTGAATTTATCgag    <  2:674910/274‑1 (MQ=255)                                                                                                                                                                                                                                              gcgTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGca                                                                                                                                                                                                                       <  2:680394/63‑1 (MQ=255)                                                                                                                                                                                                                                                gTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCtt                                                                                                                                                                                                                           >  1:471757/1‑57 (MQ=255)                                                                                                                                                                                                                                                gTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGCACACCTCGATGATCGGCCCGCACg                                                                                                                                                                                                <  2:278250/84‑1 (MQ=255)                                                                                                                                                                                                                                                gTCCGGGCCGAGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGCACACCTCGATGATCGGCCCGCACGGTGTGCCGGTTGAGGTCCAGATCCGTACCGAAGATATGGACCAGATGGCGGAGATGTGTGTTGCCGCGCACTGGGCTTATAAAGAGCACGGCGAAACCAGTACTACCGCACTAATCCGCGCCCAGCGCTGGATGCAAAGCCTGCTGGAGCTGCAACAGAGCGACGGTAGTTCGTTTGAATTTATCGagag  >  1:701195/1‑274 (MQ=255)                                                                                                                                                                                                                                                    gggCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGca                                                                                                                                                                                                                       <  2:471750/57‑1 (MQ=255)                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                                          CAACCGTAAAGAGATGATCCAGAAGATTCTTTCTGAAATCGAAGGGCGTTTGCAGGAAGCGGGAATACCGTGCCGCGTCAGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTCACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGCACACCTCGATGATCGGCCCGCACGGTGTGCCGGTTGAGGTCCAGATCCGTACCGAAGATATGGACCAGATGGCGGAGATGGGTGTTGCCGCGCACTGGGCTTATAAAGAGCACGGCGAAACCAGTACTACCGCACAAATCCGCGCCCAGCGCTGGATGCAAAGCCTGCTGGAGCTGCAACAGAGCGCCGGTAGTTCGTTTGAATTTATCGAGAG  >  CP009273/3816380‑3816892

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.