New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	4378533 =	52 (1.350)	9 (0.250)	7/292	NT	16.5%	coding (655/3324 nt)	mscM	mechanosensitive channel protein, miniconductance
	?	CP009273	4378844 =	43 (1.200)					coding (344/3324 nt)	mscM	mechanosensitive channel protein, miniconductance

GTTCACGCAGCGTATTCAACGCCTGCCGGACCTGTAACGTCTGGCTGGCAGCCTGACGCTGTTGCGAGGCAACGAGATCCATCCGCTGCGCCTGTTGATTCAAAGCCGCCGATAGTTCGCGGTTAATTTTGAATTGCGCGACGATATCTTTCGGCAAATCGGCGCTGTTTTCTGCCAGCAATTCGGTACTTTCCAGCGCCCGCTCCGCCTCAAGCTGACGTTGGCTGTTTAATTGATTACGCAAGGCCTGCAAATACGCATCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTGGCGGTTATTGGCAGACAGCTGCGCCAGCTCCAGTTCATCAACGAGCGCCTTAAGACGTGCAGAGTCAGACTGCAACGCGAAATTTTGTGCCTGATTGAGCGGAGTATTGCCGGTAAGCGTTCCCAGGCGGCGCTCGATCTCATTTAACTGACGGCGGGCGTCGGTTTGCTGTTGCGGCAGTTGATTCAGCGAATCGGCAATCTCGCGGGCGCGC  >  CP009273/4378272‑4378801                                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                                             gttcagcgagggTATTCAACGCCTGCCGGACCTGTAACGTCTGGCTGGCAGCCTGACGCTGTTGCGAGGCAACGAGATCCATCCGCTGCGCCTGTTGCTTCAAAGCCGCCGATAGTTCGCGGTTAATTTTGAATTGCGCGACGATATCTTTCGGCAAATCGGCGCTGTTTTCTGCCAGCAATTCGGTACTTTCCAGCGCCCGCTCCGCCTCAAGCTGACGTTGGCTGTTTAATTGATTACGCAAGGCCTGCAAATACGCATCCAGTTGCTGGctc                                                                                                                                                                                                                                                                 <  1:405280/264‑1 (MQ=255)                 cAACGCCTGCCGGACCTGTAACGTCTGGCTGGCAGCCTGACGCTGTTGCGAGGCAACGAGATCCATCCGCTGCGCCTGTGGATTCAAAGCCGCCGATAGTTCGCGGTTAATTTTGAATTGCGCGACGATATCTGTCGGCAAAGCGGCGCTGTTGTCTGCCAGCAATTCGGTACTTTCCAGCGCCCGCTCCGCCTCAAGCTGACGTTGGCTGTTTAATTGATTACGCAAGGCCTGCAAATACGCATCCAGTTGCTGGCTCTCTTTTTCCGCCAGct                                                                                                                                                                                                                                                 <  1:413449/275‑1 (MQ=255)                     gCCTGCCGGACCTGTAACGTCGGGCTGGCAGCCTGACGCTGTTGCGAGGCACGGAGATCCATCCGCTGCGCCTGTTGATTCAAAGCCGCCGATAGTTCGCGGTTAATTGTGAATTGCGCGACGATATCTTTCGGCAACTCGGAGCTGTTTTCTGCCAGCATTTCGGTCCTTTCCCGCGCCCGCTCCGCCTCAAGCTGACGTTGGCTGGTTAATTGATTACGAAAGCCCTACAAATACGCATCCAGTGGCTAGCCGCCCTTNCTCGCCAGctctaa                                                                                                                                                                                                                                             >  2:535155/1‑273 (MQ=255)                       cTGCCGGACCTGTAACGTCTGGCTGGCAGCCTGACGCTGTTGCGAGGCAACGAGATCCATCCGCTGCGCCTGTTGATTCAAAGCCGCCGATAGTTCGCGGTTAATTTTGAATTGCGCGACGATATCTTTCGGCAAATCGGCGCTGTTTTCTGCCAGCAATTCGGTACTTTCCAGCGCCTGCACCGCCTCAAGCTGACGTTGTCTGTCTAATTGATTACGCAAGGCCTGCAAATACGCATCCAGTTGCTGGCCCTCTTTTTCCGCAAGCTCTGAGc                                                                                                                                                                                                                                           >  1:154089/1‑275 (MQ=255)                            ggACCTGTAACGTCTGGCTGGCAGCCTGACGCTGTTGCGAGGCAAAGAGATCCATCCGCTGCGCCTGTTGATTCAAAGCCGCCGATAGTTCNCGGTTAATTTTGAATTGCGCGACGATATCTTTCGGCAAATCGGCGCTGTTTTCTGCCAGCAATTCGGTACTTTCCAGCGCCCGCTCCGCCTCAAGCTGACGTTGGCTGTTTAATTGATTACGCAAGGCCTGCAAATACGCATCCAGTTGCTGGCGCTCTTTTTCCGACAGCTCTGAGCGTAAg                                                                                                                                                                                                                                      <  1:535163/275‑1 (MQ=255)                                          tggctggcAGCCTGACGCTGTTGCGAGGCAACGAGATCCATCCGCTGCGCCTGTTGATTCAAAGCCGCCGATAGTTCGCGGTTAATTTTGAATTGCGCGACGATATCTTTCGGCAAATCGGCGCTGTTTTCTGCCAGCAATTCGGTACTTTCCAGCGCCCGCTCCGCCTCAAGCTGACGTTGGCTGTTTAATTGATTACGCAAGGCCTGCAAATACGCATCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTTAGCGTAAGCGCGCTAATTc                                                                                                                                                                                                                           >  1:278314/1‑272 (MQ=255)                                            gcgggcAGCCTGCCGCTGTGTTGTGGCAACGAGTGCCATCCGCTGCGCCTGTTGATTCAAAGCCGCCGATAGTTCGCGGTTAATTTTGAATTGCGCGACGATATCTTTCGGCAAATCGGCGCTGTTTTCTTCCAGCAATTCGGTACTTTCCAGCGCCCGCTCCGCCTCAAGCTGACGTTGGCTGTTTAATTGATTACGCAAGGCCTGCAAATACGCATCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTgg                                                                                                                                                                                                                       <  2:154086/271‑1 (MQ=255)                                               ggcAGCCTGACGCTGTTGCGAGGCAACGAGATCCATCCGCTGCGCCTGTTGATTCAAAGCCGCCGATAGTTCGCGGTTAATTTTGAATTGCGCGACGATATCTTTCGGCAAATCGGCGCTGTTTTCTGCCAGCAATTCGGTACTTTCCAGCGCCCGCTCCGCCTCAAGCTGACGTTGGCTGTTTAATTGATTACGCAAGGCCTGCAAATACGCATCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTGGCGGt                                                                                                                                                                                                                   <  1:261688/275‑1 (MQ=255)                                                 cAGCCTGACGCTGTTGCGAGGCAACGAGATCCATCCGCTGCGCCTGTTGATTCAAAGCCGCCGATAGTTCGCGGTTAATTTTGAATTGCGCGACGATATCTTTCAGCAAATCGGCGCTGTTTTCTGCCAGCAATTCGGTACTTTCCAGCGCCCGCTCCGCCTCAAGCTGACGTTGGCTGTTTAATTGATTACGCAAGGCCTGCAAATACGCATCCAGTTGCTGCCTCTCTTTTTCCCCCAGCCCTGATNTTAAGCTCACTCATCCCttctctatt                                                                                                                                                                                                                 >  2:466660/1‑267 (MQ=255)                                                       gACGCTGTTGCGAGGCAACGAGATCCATCCGCTGCGCCTGTTGATTCAAAGCCGCCGATAGTTCGCGGTTAATTTTGAATTGCGCGACGATATCTTTCGGCAAATCGGCGCTGTTTTCTGCCAGCAATTCGGTACTTTCCAGCGCCCGCTCCGCCTCAAGCTGACGTTGGCTGTTTAATTGATTACGCAAGGCCTGCAAATACGCATCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTGGCGGTTATTGGCa                                                                                                                                                                                                           <  1:55128/275‑1 (MQ=255)                                                       gACGCTGTTGCGAGGCAACGAGATCCATCCGCTGCGCCTGTTGATTCAAAGCCGCCGATAGTTCGCGGTTAATTTTGAACTGCGCGACGATATCTTTCGGCAAATCGGCGCTGTTTTCTGCCAGCAATTCGGTACTTTCCAGCGCCCGCTCCGCCTCAAGCTGACGTTGGCTGTTTAATTGATTACGCAAGGCCTGCAAATACGCATCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTGGCGGTTATTGGCa                                                                                                                                                                                                           <  1:713030/275‑1 (MQ=255)                                                                        cgagaatccctccGGTGCTCCGGTTGGTTTAAAGCCGCCGTTAGTTCGGGGTTAATTTTGGATTGCGGGACGATATCTTTCGGCAAATCGGCGCTGTTTTCTGCGAGCAATTCGGTACTTTCCCGCGCCCGCTCCGCCTCAAGCTGACGTTGGCTGTTTAATTGATTAAGCAAGGCCTGCAAATACGCATCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTGGCGGTTATTGGCAGACAGCTGCGCCAGCTc                                                                                                                                                                                          <  2:4215/270‑1 (MQ=255)                                                                          gagaTCCATCCGCTGCGCCTGTTGATTCAAAGCCGCCGATAGTTCGCGGTTAATTTTGAATTGCGCGACGATATCTTTCGGCAAATCGGCGCTGTTTTCTGCCAGCAATTCGGTACTTTCCAGCGCCCGCTCCGCCTCAAGCTGACGTTGGCTGTTTAATTGATTACGCAAGGCCTGCAAATACGCATCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTGGCGGTTATTGGCAGACAGCTGCGCCAGCTCCa                                                                                                                                                                                        <  1:626276/275‑1 (MQ=255)                                                                           agaTCCATCGGCTGCGCCTGTTGATTCAAAGCCGCCGATAGTTCGCGGTTAATTTTGAATTGCGCGACGATATCTTTCGGCAAATCGGCGCTGTTTTCTGCCAGCAATTCGGTACTTTCCAGCGCCCGCTCCGCCTCAAGCTGACGTTGGCTGTTTAATTGATTACGCAAGGCCTGCAAATACGCATCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTGGCGGTTATTGGCAGACAGCTGCGCCAGCTCCa                                                                                                                                                                                        <  1:202940/274‑1 (MQ=255)                                                                                     gCTGCGCCTGTTGCTTCAAAGCCGACGATAGTTCGCGGTTAATTTTGAATTGCGCGACGATATCTTTCGGCAAATCGGCGCTGTTTTCTGCCAGCAATTCGGTACTTTCCAGCGCCCGCTCCGCCTCAAGCTGACGTTGGCTGTTTACTTGATTACGCAAGGCCTGCAACTACGCATCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTTTGAGCGTACGCGCGCTAATTCCTGGCGGTTATTGGCAGACACCTGCGACAGcccccttttttttt                                                                                                                                                                               >  2:593307/1‑263 (MQ=255)                                                                                           ccTGTTGATTCAAAGCCGCCGATAGTTCGCGGTTAATTTTGAATTGCGCGACGATATCTTTCGGCAAATCGGCGCTGTTTTCTGCCAGCAATTCGGTACTTTCCAGCGCCCGCTCCGCCTCAAGCTGACGTTGGCTGTTTAATTGATTACGCAAGGACTGCAAATACGCATCCATTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCCCGCAAATTCCTGGGGGTTCTTGGAGGGCCGCGGCTCCCGCTCCAGttacccaacccc                                                                                                                                                                           >  2:645526/1‑261 (MQ=255)                                                                                                             ccgATAGTTCGCGGTTAATTTTGAATTGCGCGACGATATCTTTCGGCAGATCGGCGCTGTTTTCTGCCAGCAATTCGGTACTTTCCAGCGCCCGCTCCGCCTCAAGCTGACGTTGGCTGTTTAATTGATTACGCAAGGCCTGCAAATACGCATCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTGGCGGTTATTGGCAGACAGCTGCGCCAGc                                                                                                                                                                                            >  1:324128/1‑236 (MQ=255)                                                                                                                 tAGTTCGCGGTTAATTTTGAATTGCGCGACGATATCTTTCGGCAGATCGGCGCTGTTTTCTGCCAGCAATTCGGTACTTTCCAGCGCCCGCTCCGCCTCAAGCTGACGTTGGCTGTTTAATTGATTACGCAAGGCCTGCAAATACGCATCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTGGCGGTTATTGGCAGACAGCTGCGCCAGCTCCa                                                                                                                                                                                        <  2:324122/236‑1 (MQ=255)                                                                                                                    ttCGCGGTTAATTTTGAATTGCGCGACGATATCTTTCGGCAAATCGGCGCTGTTTTCTGCCAGCAATTCGGTACTTTCCAGCGCCCGCTCCGCCTCAAGCTGACGTTGGCTGTTTAATTGATTACGCAAGGCCTGCAAATACGCATCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAAGTCCTGGCGGTTATTGGCAGACAGCTgcgc                                                                                                                                                                                                >  1:672594/1‑225 (MQ=255)                                                                                                                        cgGTTAATTTTGAATTGCGCGACGATATCTTTCGGCAAATCGGCGCTGTTTTCTGCCAGCAATTCGGTACTTTCCAGCGCCCGCTCCGCCTCAAGCTGACGTTGGCTGTTTAATTGATTACGCAAGGCCTGCAAATACGCATCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTGGCGGTTATTGGCAGACAGCTGCGCCAGc                                                                                                                                                                                            <  2:672585/225‑1 (MQ=255)                                                                                                                           atcagcaagttatcgataattatccgaaactctccgctactctgcgcgcacaattaaacaacatgcgtgacgagccgcgcagcgtgtcgccgggaatgtctaccgacgcgctgaatcaggaaattctccaggtcagcagCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTGGCGGTTATTGGCAGACAGCTGCGCCAGCCCCAGTTCATCAACGAGCGCCTTAAGACGTGCAGAGTCAGACTGCAACGCGaa                                                                                                                                       <  2:88787‑M1/136‑1 (MQ=255)                                                                                                                            tAATTTTTAATTGCTCGACGATATCTTTCGGCAAATCGGCGCTGTTTTCTGCCAGCAATTCGGTACTTTCCAGCGCCCGCTCCGCCTCAAGCTGACGTTGGCTGTTTAACTGATTACGCAAGGCCTGCAAATACGCATCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTGGCGGTTATTGGCAGACAGCTGCGCCAGCTCCAGTTCATCAACGAGCGCCTTAAGACGTGCAGAGTCAGACTGCAACGCGaaa                                                                                                                                      <  1:593316/275‑1 (MQ=255)                                                                                                                            tAATTTTGAATTGCGCGACAATATCTTTCGGCAAATCGGCGCTGTTTTCTGCCAGCAATTCGGTACTTTCCAGCGCCCGCTCCGCCTCAAGCTGACGTTGGCTGTTTAATTGATTACGCAAGGCCTGCAAATACGCATCCAGTTGCTGGATCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTGGCGGTTATTGGCAGACAGCTGCGCCAGCTCCAGGTCATCAACGAGAGCCTTAAGACGTGCAGAGTCAGACTGCAACGCGaaa                                                                                                                                      >  1:571631/1‑275 (MQ=255)                                                                                                                               gtgtGAATGGCGCGACGATCTCTTTCGGCAAAGCCGCGCTGTTTTCTGCCCGCAATTCGGTACTTTCCAGCGCCCGCTCCGCCTCAAGCTGACGTTGGCTGTTTAATTGCTTACGCAAGGCCTGCAAATACGCATCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTGGCGGTTATTGGCAGACAGCTGCGCCAGCTCCAGTTCATCAACGAGCGCCTTAAGACGTGCAGAGTCAGACTGCAACGCGAAAtt                                                                                                                                    <  2:142364/271‑1 (MQ=255)                                                                                                                                         cgcgACGATATCTTTCGGCAAATCGGCGCTGTTTTCTGCCAGCAATTCGGTACTTTCCAGCGCCCGCTCCGCCTCAAGCTGNCGTTGGCTNTTTAATTGATTACGCAAGGCCTGCAAATACGCATCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTGGCGGTTATTGGCAGACAGCTGCGCCAGCTCCAGTTCATCAACGAGCGCCTTAAGACGTGGAGAGTCAGACTGCAACGCGAAATTTTGTGCCTGa                                                                                                                          <  1:468594/274‑1 (MQ=255)                                                                                                                                         cgcgACGATATCTTTCGGCAAATCGGCGCTGTTTTCTGCCAGCAATTCGGTACTTTCCAGCGCCCGCTCCGCCTCAAGCTGACGTTGGCTNTTTAATTGATTACGCAAGGCCTGCAAATACGCATCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTGGCGGTTATTGGCAGACAGCTGCGCCAGCTCCAGTTCATCAACGAGCGCCTTAAGACGTGCAGAGTCAGACTGCAACGCGAAATTTTGTGCCTGa                                                                                                                          <  1:518792/274‑1 (MQ=255)                                                                                                                                                atttttttCGGCAAATCGGCGCTGTTTTCTGCCAGCAATTCGGTACGTTCCAGCGCCCGCTCCGCCTCAAGCTGACGTTGGCTGTTTAATTGATTACGCAATGCCTGCAAATACGCNTCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTGGCGGTTATTGGCAGACAGCTGCGCCAGCTCCAGTTCATCAACGAGCGCCTTAAGACTTGCAGAGTCAGACTGCAACGCGAAATTTTGTGCCTGATTGAGCgg                                                                                                                  <  1:669701/270‑1 (MQ=255)                                                                                                                                                atatCTTTCGGCAAATCGGCGCTTTTTTCTGCCAGCAATTCGGTACTTTCCAGCGCCCGCTCCGCCTCAAGCTGACGTTGGCTGTTTAATTGATTACGCAAGGCCTGCAAATACGCATCCAGCTGCTGTCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTGGCGGTTATTGGCAGACAGCTGCGCCAGCTCCAGTTCATCAACGAGCGCCTTAAGACGTGCAGAGTCAGACTGCAACGCGAAATTTTGTGCCTGATTGAGCgg                                                                                                                  <  1:645535/275‑1 (MQ=255)                                                                                                                                                      ttCGGCAAATCGGCGCTGTTTTCTGCCAGCAATTCGGTACTTTCCAGCGCCCGCTCCGCCTCAAGCTGACGTTGGCTGTTTAATTGATTACGCAAGGCCTGCAAATACGCATCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTGGCGGTTATTGGCAGACAGCTGCGCCCGCCCCAGTTCCTCAAc                                                                                                                                                                              >  2:470516/1‑209 (MQ=255)                                                                                                                                                          gCAAATCGGCGCTGTTNTCTGCCAGNAATTCGGTACTTTCCAGCGCCCGCTCCGCCTCAAGCTGACGTTGGCTGTTTAATTGATTACGCAAGGCCTGCAAATACGCATCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTGGCGGTTATTGGCAGACAGCTGCGCCAGCTCCAGTTCATCAACGAgc                                                                                                                                                                          <  1:470523/209‑1 (MQ=255)                                                                                                                                                               tCGGCGCTGTTTTCTGCCAGCAATTCGGTACTTTCCAGCGCCCGCTCCGCCTCAAGCTGACGTTGGCTGTTTAATTGATTACNCAAGGCCTNCAAATACGCATCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTGGCGGTTATTGGCAGACAGCTGCGCCAGCTCCAGTTCATCAACGAGCGCCTTAAGACGTGCAGAGTCAGACTGCAACGCGAAATTTTGTGCCTGATTGAGCGGAGTATTGCCGGTAAg                                                                                                   <  1:466667/275‑1 (MQ=255)                                                                                                                                                                                  gCAATTCGGTACTTTCCAGCGCCCGCTCCGCCTCAAGCTGACGTTGGCTGTTTAATTGATTACGCAAGGCCTGCAAATACGCATCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTGGCGGTTATTGGCAGACAGCTGCGCCAGCTCCAGTtcatca                                                                                                                                                                                >  1:458711/1‑179 (MQ=255)                                                                                                                                                                                      ttCGGTACTTTCCAGCGCCCGCTCCTCCCCAATCTGACGTTGGCTTTTTTATTGATTACGCAAGGCCTGCAAATACGCATCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAATCGCGCTAATTCCTGGCGGTTATTGGCAGACAGCTGCGCCAGCTCCAGTTCATCAACGa                                                                                                                                                                            <  2:458704/179‑1 (MQ=255)                                                                                                                                                                                            cgtgacgagccgcgcagcgtgtcgccgtgaatgtctaccgacgcgctgaatcaggaaattctccaggtcagcagcc                                                                                                                                                                                                                                                                             >  1:43847‑M1/75‑76 (MQ=255)                                                                                                                                                                                                       cccGCTCCGCCTCAAGCTGACGTTGGCTGTTTAATTGATTACGCAAGGCCTGCAAATACGCATCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTGGCGGTTATTGGCAGACAGCTg                                                                                                                                                                                                   >  1:524388/1‑139 (MQ=255)                                                                                                                                                                                                       cccGCTCCGCCTCAAGCTGACGTTGGCTGTTTAATTGATTACGCAAGGCCTGCAAATACGCATCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTGGCGGTTATTGGCAGACAGCTGCGCCa                                                                                                                                                                                              >  2:315929/1‑144 (MQ=255)                                                                                                                                                                                                        ccGCTCCGCCTCAAGCTGACGTTGGCTGTTTAATTGATTACGCAAGGCCTGCAAATACGCATCCAGTTGCTGGCTCTCTTTTTCCGcc                                                                                                                                                                                                                                                     >  2:428797/1‑88 (MQ=255)                                                                                                                                                                                                           cTCCGCCTCAAGCTGACGTTGGCTGTTTAATTGATTACGCAAGGCCTGCAAATACGCATCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTGGCGGTTATTGGCAGACAGCTGCGcc                                                                                                                                                                                               <  2:524381/139‑1 (MQ=255)                                                                                                                                                                                                           cTCCGCCTCAAGCTGACGTTGGCTGTTTAATTGATTACGCAAGGCCTGCAAATACGCATCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTGGCGGTTATTGGCAGACAGCTGCGCCAGCTc                                                                                                                                                                                          <  1:315935/144‑1 (MQ=255)                                                                                                                                                                                                            tCCGCCTCAAGCTGACGTTGGCTGTTTAATTGATTACGCAAGGCCTGCAAATACGCATCCAGTTGCTGGCTCTCTTTTTCCGCCAGct                                                                                                                                                                                                                                                 <  1:428804/88‑1 (MQ=255)                                                                                                                                                                                                                ccTCAAGCTGACGCTGGCTGTTTGATTGATTCCGCAAGCCCTACAAATACGCATCCAGTCGCTGGCTCCCTGTTACCGCCAGCTCTGAGCGTAACTGCGCTAACCCCTGGCGGTTATTGACAGACAGCTGCGCCAGCTCCAGTGCATCAACGAGCGCCCTAAGACGTGCAGAGTCAGACTGCAACGCGAAATTTTGTGCCTGCTTGAGCGGAGTATTGCCGGTAAGCGTTCCCAGGCGGCGCGCGATCTCATTAAACTGAcgctcggcggacgtt                                                  >  2:127112/1‑262 (MQ=255)                                                                                                                                                                                                                      gCTGACGTTGGCTGTTTAATTGATTACGCAAGGCCTGCAAATACGCATCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTGGCGGTTATTGGCAGACAGCTGCGCCAGCTCCAGTTCATCaa                                                                                                                                                                               >  2:441032/1‑144 (MQ=255)                                                                                                                                                                                                                       ggaatgtctaccgacgcgctgaatcaggaaattctccaggtcagcagCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTGGCGGTTATTGGCAGACAGCTGCGCCAGc                                                                                                                                                                                            <  2:675183‑M1/83‑1 (MQ=255)                                                                                                                                                                                                                          aCGTTGGCTGTTTAATTGATTACGCAAGGCCTGCAAATACGCATCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTGGCGGTTATTGGCAGACAGCTGCGCCAGCTCCAGTTCATCAACGAg                                                                                                                                                                           <  1:441039/144‑1 (MQ=255)                                                                                                                                                                                                                           tgtctaccgacgcgctgaatcaggaaattctccaggtcagcagCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTGGCGGTTATTGGCAGACAGCTGCGCCAGCTCCa                                                                                                                                                                                        >  1:675192‑M1/44‑130 (MQ=255)                                                                                                                                                                                                                                gCTGTTTAATTGATTACGCAAGGCCTGCAAATACGCATCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTGGCGGTTATTGGCAGACAGCTGCGCCAGCTCCAGTtcatca                                                                                                                                                                                >  2:506825/1‑133 (MQ=255)                                                                                                                                                                                                                                gCTGTTTAATTGATTACGCAAGGCCTGCAAATACGCATCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTGGCGGTTATTGGCAGACAGCTGCGCCAGCTCCAGTTCATCAACGAGCGCCTTAAGACGTGCAGAGTCAGACTGCAACGCGAAATTTTGTGCCTGATTGa                                                                                                                      >  2:703351/1‑191 (MQ=255)                                                                                                                                                                                                                                    tttAATTGATTACGCAAGGCCTGCAAATACGCATCCAGTTGCTGTCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTGGCGGTTATTGGCAGACAGCTGCGCCAGCTCCAGTTCATCAACGAGCGCCTTAAGACGTGCAGAGTCAGACTGCAACGCGAAATTTTGTGCCTGATTGAGCGGAGTATTGACGGTAAGCGTTCCCAGGCGGCGCACGATCTCATTTAACTGACGGCGGCCGTCGGTTTGCTGTTGCGGCatctggtt                              >  1:320774/1‑268 (MQ=255)                                                                                                                                                                                                                                    tttAATTGATTACGCAAGGCCTGCAAATACGCATCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTc                                                                                                                                                                                                                           >  2:517350/1‑86 (MQ=255)                                                                                                                                                                                                                                    tttAATTGATTACGCAAGGCCTGCAAATACGCATCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTGGCGGTTATTGGCAGACAGCTGCGCCAGCTCCAGTTCATCAACGa                                                                                                                                                                            <  1:506832/133‑1 (MQ=255)                                                                                                                                                                                                                                    tttAATTGATTACGCAAGGCCTGCAAATACGCATCCAGTTGCTGGCTCTCTTTTGCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTGGCGGTTATTGGCAGACAGCTGCGCCAGCTCCAGTTCATCAACGAGCGCCTTAAGACGTGCAGAGTCAGACTGCAACGCGAAATTTTGTGCCTGATTGAGCgg                                                                                                                  <  1:703360/191‑1 (MQ=255)                                                                                                                                                                                                                                    gcgcgctgaatcaggaaattctccaggtcagcagCCAg                                                                                                                                                                                                                                                                           <  1:25187‑M1/4‑1 (MQ=255)                                                                                                                                                                                                                                      gcgctgaatcaggaaattctccaggtcagcagCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTGGCGGTTATTGGCAGACAGCTGCGCCAGCTCCAGTtcatca                                                                                                                                                                                <  1:687145‑M1/95‑1 (MQ=255)                                                                                                                                                                                                                                        gctgaatcaggaaattctccaggtcagcagCCAGTTGc                                                                                                                                                                                                                                                                       >  2:25187‑M1/31‑38 (MQ=255)                                                                                                                                                                                                                                        aTTGATTACGCAAGGCCTGCAAATACGCATCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTgg                                                                                                                                                                                                                       <  1:517357/86‑1 (MQ=255)                                                                                                                                                                                                                                          tgaatcaggaaattctccaggtcagcagCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTGGCGGTTATTGGCAGACAGCTGCGCCAGCTCCAGTTCATCAACGa                                                                                                                                                                            >  2:687136‑M1/29‑127 (MQ=255)                                                                                                                                                                                                                                            aTTACGCAAGGCCTGCAAATACGCATCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTgg                                                                                                                                                                                                                       >  2:535624/1‑82 (MQ=255)                                                                                                                                                                                                                                                cGCAAGGCCTGCAAATACGCATCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTGGCGGt                                                                                                                                                                                                                   <  1:535632/82‑1 (MQ=255)                                                                                                                                                                                                                                                    aattctccaggtcagcagCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTGGCGGTTATTGGCAGACAGCTGCGCCAGc                                                                                                                                                                                            <  1:307760‑M1/83‑1 (MQ=255)                                                                                                                                                                                                                                                      gCCGGCATATACGCATCCAGTTGCGGGCTCGCTTTTTCCGCCAGCTCTCCGACTAAGCGCGCAAATTCCTGGCGCGTATTGGACGACAGCTGCGCCAGCACCAGCTCACCAACGCGCGCATTAAGACGTGCAGAGTCAGACTGCAGCGCGAAAttt                                                                                                                                   >  2:579967/1‑156 (MQ=255)                                                                                                                                                                                                                                                        ctccaggtcagcagCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTGGCGGTTATTGGCAGACAGCTGCGCCAGc                                                                                                                                                                                            <  1:540849‑M1/83‑1 (MQ=255)                                                                                                                                                                                                                                                        ctccaggtcagcagCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTGGCGGTTATTGGCAGACAGCTGCGCCAGCTCCa                                                                                                                                                                                        >  2:307754‑M1/15‑101 (MQ=255)                                                                                                                                                                                                                                                          gCAAATACGCATCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTGGCGGTTATTGGCAGACAGCTGCGCCAGCTCCAGTTCATCAACGAGCGCCTTAAGACGTGCAGAGTCAGACTGCAACGCGAAATTTtgtg                                                                                                                               <  1:579976/156‑1 (MQ=255)                                                                                                                                                                                                                                                            aggtcagcagCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTGGCGGTTATTGGCAGACAGCTGCGCCAGCTCCa                                                                                                                                                                                        >  2:540841‑M1/11‑97 (MQ=255)                                                                                                                                                                                                                                                                 cGCATCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTGGCGGTTATTGGCAGACAGCTGCGCCAGCTCCAGTTCATCAACGAGCGCCTTAAGa                                                                                                                                                                 >  2:437661/1‑115 (MQ=255)                                                                                                                                                                                                                                                                 cGCATCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTGGCGGTTATTGGCAGACAGCTGCGCCAGCTCCAGTTCATCAACGAGCGCCTTAAGACGTGCAGAGTCAGACTGCAACGCGAAATTTTGTGCCTGAt                                                                                                                         >  1:126041/1‑155 (MQ=255)                                                                                                                                                                                                                                                                 cGCATCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTGGCGGTTATTGGCAGACAGCTGCGCCAGCTCCAGTTCATCAACGAGCGCCTTAAGACGTGCAGAGTCAGACTGCAACGCGAAATTTTGTGCCTGATTGAGCGGAGTATTGc                                                                                                          >  2:392491/1‑170 (MQ=255)                                                                                                                                                                                                                                                                 cGCATCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGGAAGCGCGCTAATTCCTGGCGGTTATTGGCAGACAGCTGCGCCCGCTCCAGTTAATCAACGAGCGCCTTAAGACGTGCAGCGTCAGACTGCAACGCGAACTTATGTGCCTGATTGAGCGGAGTATTGCCGGTAAGCGATCCCAGGCGGCGCTCGATCTCATTTAACTGACGGCGGGCGTCGGTTTGCCGACGCGGCAGTTGATTCAGCGAATCTGCACTCGCTCGGgcgccc  >  2:628401/1‑272 (MQ=255)                                                                                                                                                                                                                                                                     tCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAgcgc                                                                                                                                                                                                                                   >  2:496989/1‑45 (MQ=255)                                                                                                                                                                                                                                                                     tCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTGGCGGTTATTGGCAGACAGCTGCGCCAGCTCCAGTTCATCAACGAGCGCCTTAAGACGTg                                                                                                                                                             <  1:437668/115‑1 (MQ=255)                                                                                                                                                                                                                                                                     tCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTGGCGGTTATTGGCAGACAGCTGCGCCAGCTCCAGTTCATCAACGAGCGCCTTAAGACGTGCAGAGTCAGACTGCAACGCGAAATTTTGTGCCTGATTGAg                                                                                                                     <  2:126040/155‑1 (MQ=255)                                                                                                                                                                                                                                                                     tCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTGGCGGTTATTGGCAGACAGCTGCGCCAGCTCCAGTTCATCAACGAGCGCCTTAAGACGTGCAGAGTCAGACTGCAACGCGAAATTTTGTGCCTGATTGAGCGGAGTATTGCCGGt                                                                                                      <  1:392497/170‑1 (MQ=255)                                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                                             GTTCACGCAGCGTATTCAACGCCTGCCGGACCTGTAACGTCTGGCTGGCAGCCTGACGCTGTTGCGAGGCAACGAGATCCATCCGCTGCGCCTGTTGATTCAAAGCCGCCGATAGTTCGCGGTTAATTTTGAATTGCGCGACGATATCTTTCGGCAAATCGGCGCTGTTTTCTGCCAGCAATTCGGTACTTTCCAGCGCCCGCTCCGCCTCAAGCTGACGTTGGCTGTTTAATTGATTACGCAAGGCCTGCAAATACGCATCCAGTTGCTGGCTCTCTTTTTCCGCCAGCTCTGAGCGTAAGCGCGCTAATTCCTGGCGGTTATTGGCAGACAGCTGCGCCAGCTCCAGTTCATCAACGAGCGCCTTAAGACGTGCAGAGTCAGACTGCAACGCGAAATTTTGTGCCTGATTGAGCGGAGTATTGCCGGTAAGCGTTCCCAGGCGGCGCTCGATCTCATTTAACTGACGGCGGGCGTCGGTTTGCTGTTGCGGCAGTTGATTCAGCGAATCGGCAATCTCGCGGGCGCGC  >  CP009273/4378272‑4378801

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.