| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4447006 = | NA (NA) | 4 (0.110) | 4/298 | NT | 10.5% | noncoding (5/84 nt) | REP337 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP337 (repetitive extragenic palindromic) element; contains 2 REP sequences |
| ? | CP009273 | 4447104 = | 34 (0.930) | intergenic (+129/+27) | mpl/yjgA | UDP‑N‑acetylmuramate:L‑alanyl‑gamma‑D‑glutamyl‑ meso‑diaminopimelate ligase/ribosome‑associated UPF0307 family protein | |||||
AGGTCGTGCCGATGAAGTCTTCCTGCTGCAACCGGCGCATATTCCGTGGCAGGTGGCAGAAGTGGCAGAAGCCTGCGTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTGGTGGGATCCATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAATTACCCTTCGTTCTCCGCTAACTCGCGCAGATACTGGAAAATCTGGCGTGCGGATTTCGGCGGCTTATTCCCTTCTTTCTCTTTCTTCGCGTTGCGGATCAGAGTACGCAGTTGCTGACGATCGGCATCGGGCCACAGATTTAATACCT > CP009273/4446735‑4447279 | gctgaaaacccgtcacaaccagcaggttgtgctgttccataaactggaaaacctgctcgatcgtataatcgatcaaggtgatgacgcgatcgctgaggtattacatctgtggcccgatgccgatcgtcagcaactgcgtactctgatccgcaacgcgaagaaagagaaagaagggaataagccgccgaaatccgcacgccagattttccagtatctgcgcgagttagcggagaacgaagggtaattttcgttgttgatgtgagtatggtttGcc > 1:458982‑M1/272‑274 (MQ=255) aaaaaccgtaccaaccagcagggtgtgctgttccagaaactggaaaacctgagtgatcgtcttatcgatcaaggtgatgacgccatcgctgaggtattaaatctgtggcccgatgccgatcgtcagcaactgcgtactctgagccgcaacgcgaagaaagagaaagaagggaataagccgccgaaatccgcacgccagattttccagtatctgcgcgagttagcggagaacgaagggtaattttcgttgttgatgtgagtatggtttGCCGGa > 2:318947‑M1/268‑273 (MQ=255) aatgtgttcacaaccagcaggtggtgttgttccataatctggaaaacctgcgcgatcgtctgatcgatcaaggtgatgacgccatcgctgaggtattaaatctgttgcccgatgcngatcgtcagcacctgcgtactctgatccgcaacgcgaagaaagagaaagaagggaataagccgccgaaatccgcacgccagattttccagtatctgcgcgagttagcggagaacgaagggtaattttcgttgttgatgtgagtatggtttGCCGGATa > 1:662531‑M1/267‑274 (MQ=255) aaaaccgtcacaaccagcaggtggtgcttttccataaactggaaaacctgcgcgatcgtctgatcgatcaaggtgatgacgccatcgctgaggtattaaatctgtggcccgatgccgatcgtcagcaactgcgtactctgatccgcaacgcgaagaaagagaaagaagggaataagccgccgaaatccgcacgccagattttccagtatctgcgcgagttagcggagaacgaagggaaattatcgttgttgatgtgagtatggtttGCAGGATa < 1:331323‑M1/8‑1 (MQ=255) aaaaccgtcacaaccagcaggtggtgctgttccataaactggaaaacctgcgcgatcgtctgatcgatcaaggtgatgacgccatcgctgaggtattaaatctgtggcccgatgccgatcgtcagcaactgcgtactctgatccgcaacgcgtagaaagagaaagaagggaataagccgccgaaatccgcacgcctgattttcaagtatctgcgcgagttagcggagaacgaagggtaattttcgttgttgatgtgagtatggtttGCCGGATa < 1:673373‑M1/8‑1 (MQ=255) aaaaccgtcacaaccagcaggtggtgctgttccataaactggaaaacctgcgcgatcgtctgatcgatcaaggtgatgacgccatcgctgaggtattaaatctgtggcccgatgccgatcgtcagcaactgcgtactctgatccgcaacgcgaagaaagagaaagaagggaataagctgccgaaatccgcacgccagattttccagtatctgcgcgagttagcggagaacgaagggtaattttcgttgttgatgtgagtatggtttGCCGGATa < 1:396444‑M1/8‑1 (MQ=255) tGCCGATGAAGTCTTCCTGCTGCAACCGGCGCATATTCCGTGGCAGGTGGCAGAAGTGGCAGAAGCCTGCGTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTGGTGGGATCCATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTACCCAGAGATAGTATGCGTAGGCCGGAtca > 1:76763/1‑272 (MQ=255) aTGAAGTCTTCCTGCTGCAACCGGCGCATATTCCGTGGCAGGTGGCAGAAGTGGCAGAAGCCTGCGTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTGGTGGGATCCATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGAAGGCCGGATAAGGCggt > 1:341427/1‑273 (MQ=255) aaCCGGCGCATATTCCGTGGCAGGTGGCAGAAGTGGCAGAAGCCTGCGTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTGGTGGGATCCATCAGAAACTGCTGGCTGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCAAGCCGCATCCGGc > 1:397737/1‑272 (MQ=255) gcGTGGCAGGTGGTAAAAGTGGTGGAAGCCGGCGTGCAGCATGCACACTGGAGTGGCGATGAGGATACGCTGGCAGAGATGGTGGTGAAAACCGCTCAGCCTGGCGACCATTTTCTGGTGATGAGCAACGGCGGTTTTGGTGGGATCCATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGcc < 1:381271/273‑1 (MQ=255) gtggcagaagtggcagaaGCCTGCGTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGATAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGAGGTTTTGGTGGGATCCATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATATGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACg < 1:692325/275‑1 (MQ=255) atGCACACTGGAGTGGCGATGTGGATACGATGGAAGATATGGTGGTGAAAACCGCTAAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTGGTGGGATCCATCAGAAACTGCTGCATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCa < 1:623334/274‑1 (MQ=255) cacaCTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTGGTGGGATCCATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCAcgccgc > 1:90777/1‑208 (MQ=255) cacaCTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTGGTGGGATCCATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTTCACCg > 1:569646/1‑275 (MQ=255) cacaCTGGAGTGGCGATGTCGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTGGTGGGATCCATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAACTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCg > 1:572888/1‑275 (MQ=255) cTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTGGTGGGATCCATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATcc < 2:90776/208‑1 (MQ=255) cTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTGGTGGGATCCATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATATGGCCTGATGCGACGCTTGATGCGGCTCATCCGGCCTACAtgtggatgtgga > 2:101675/1‑266 (MQ=255) ggCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCAGATTCTGGTGATGAGCAACGGCGGTTTTGGTGGGATCCATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGc < 1:629081/272‑1 (MQ=255) aTGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTGGTGGGATCCATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCgg > 1:50285/1‑175 (MQ=255) aTGGGGATAAGTTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTGGTGGGATCCATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCa < 1:101676/274‑1 (MQ=255) tgGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTGGTGGGATCCATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCt > 2:236855/1‑225 (MQ=255) tACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTGGTGGGATCCATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGAt < 1:236860/225‑1 (MQ=255) tggtgAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTGGTGGGATCCATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGANAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAATTAc > 1:611972/1‑275 (MQ=255) gtgAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTGGTGGGATCCATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAgg > 1:214105/1‑155 (MQ=255) gtgAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTGGTGGGATCCATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCCACGCTTGATGCGTCTTATCAGGCCAACAGGTGCACCGTATCCGGCCAACCATACACACCTCAACAGCGaatagtaac > 2:114288/1‑267 (MQ=255) aaaaCCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTGGTGGGATCCATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCAcgccgc > 2:499203/1‑164 (MQ=255) aaaCCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTGGTGGGATCCATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGtt < 2:214101/155‑1 (MQ=255) ccGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTGGTGGGATCCATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATcc < 1:499210/164‑1 (MQ=255) gcaacgcgaagaaagagaaagaagggaataagccgccgaaatccgcacgccagattttccagtatctgcgcgagttagcggagaacgaagggtaattttcgttgttgatgtgagtatggtttg < 1:376241‑M1/1‑1 (MQ=255) cgcgaagaaagagaaagaagggaataagccgccgaaatccgcacgccagattttccagtatctgcgcgagttagcggagaacgaagggtaattttcgttgttgatgtgagtatggtttGCCgg > 2:376235‑M1/119‑123 (MQ=255) atgaGCAACGGCGGTTTTGGTGGGATCCATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATcc > 1:405908/1‑135 (MQ=255) gaGCAACGGCGGTTTTGGTGGGATCCATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCa > 1:46879/1‑205 (MQ=255) gCAACGGCGGTTTTGGTGGGATCCATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCa < 2:405901/135‑1 (MQ=255) aaCGGCGGTTTTGGTGGGACCAATCAGAAACTGCTGGATGGGCTGGAGAAGAAGGCGGAAGCCGCGCAGTAATGCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCGTATCAGGCCTACAGGTGCACCGTATCCGGCAAAcc < 2:46879/205‑1 (MQ=255) ggcggTTTTGGTGGGATCCATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGc < 2:680178/101‑1 (MQ=255) gttggATCCATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTCTGCGTAGGCCGGATCAGGCGTTCACGCAGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAATTACCCTACGTTCTCCGCTAACTCGCGCAGATACTGGAACATCTGGCGTGCGGATTTcgg < 1:392521/271‑1 (MQ=255) tggGTTCCATCAGAAACTGCTGTATGGGATGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAATTACCCTTCGTTCTCCGCTAACTCGCGCAGATACTGGAAAATCTGGCGTGCGGATTTcggc < 1:253308/274‑1 (MQ=255) ccgaaatccgcacgccagattttccagtatctgcgcgagttagcggagaacgaagggtaattttcgttgttgatgtgagtatggtttGc < 1:659046‑M1/2‑1 (MQ=255) ccgaaatccgcacgccagattttccagtatctgcgcgagttagcggagaacgaagggtaattttcgttgttgatgtgagtatggtttGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCt < 2:646790‑M1/68‑1 (MQ=255) aatccgcacgccagattttccagtatctgcgcgagttagcggagaacgaagggtaattttcgttgttgatgtgagtatggtttGCCGGa > 2:659037‑M1/84‑89 (MQ=255) aatccgcacgccagattttccagtatctgcgcgagttagcggagaacgaagggtaattttcgttgttgatgtgagtatggtttGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATc > 1:646799‑M1/84‑155 (MQ=255) ctgGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTg > 1:150710/1‑129 (MQ=255) aTGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGc < 2:150707/129‑1 (MQ=255) agttagcggagaacgaagggtaattttcgttgttgatgtgagtatggtttGCCGGATAAGGCGTTCACGCCGCATCCGGCa < 1:233629‑M1/31‑1 (MQ=255) agcggagaacgaagggtaattttcgttgttgatgtgagtatggtttGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTg > 2:233624‑M1/47‑81 (MQ=255) ccTTAGCCAGATATAGTATGCGTAGGCCGGATAAAGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAATTACCCTTCGTTCTCCGCTAACTCGCGCAGATANTGGAAAATNTGGCGTGCGGATTTCGGCGGCTTATTCCCTTCTTTCTCTTTCTTCGCGTTGctg > 1:484045/1‑245 (MQ=255) ttAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCt > 2:50899/1‑91 (MQ=255) aGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCAc > 1:340678/1‑109 (MQ=255) ccAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATc < 1:50899/91‑1 (MQ=255) aGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTa < 2:340672/109‑1 (MQ=255) atatAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAATTACCCTTCGTTCTCCGCTAACTCGCGCAGATACTGGAAAATCTGGCGTGCGGATTTCGGCGGCTTATTCACATCTTTCTCTTTCTTCGCGTTGCGGATCAGAGTACGCAGTTGCTAACGATCGGCATCGGGcc > 1:205648/1‑274 (MQ=255) tgtGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTg > 2:715568/3‑44 (MQ=255) tATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCt > 2:308568/1‑67 (MQ=255) tATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCa > 1:434419/1‑82 (MQ=255) tGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAATTACCCTTCGTTCTCCGCTAACTCGCGCAGATACTGGAAAATCTGGCGTGCGGATTTCGGCGGCTTATTCCCTTCTTTCTCTTTCTTCGCGTTGCGGATCAGAGTACGCAGTTGCTGACGATCGGCATCGGGCCACAGATTTa > 1:308997/1‑275 (MQ=255) cGTAGGCCGGATAAGGCGTTCACGCCGCATCCGTCATTTGAGCa < 1:715578/44‑1 (MQ=255) cGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGAt < 1:308574/67‑1 (MQ=255) cGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGcc < 2:434412/82‑1 (MQ=255) cGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAATTACCCtt > 1:120648/1‑138 (MQ=255) cGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAATTACCCtt > 2:441906/1‑138 (MQ=255) cGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAATTACCCTTCGTTCTCCGCTAACTCGCGCAGATACTGGAAAATCTGGCGTGCGGATTTCGGCGGCTTATTCCCTTCTTTCTCTTTCTTCGCGTTGCGGATCAGAGTCCGCAGTTGCTGACGATCGGCATCGGGCCACAGCTTTAAt > 1:172292/1‑275 (MQ=255) ggCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAATTACCCTTCGtt < 2:120647/138‑1 (MQ=255) ggCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAATTACCCTTCGtt < 1:441913/138‑1 (MQ=255) GCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTAc < 2:691562‑M1/80‑1 (MQ=255) GCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAATTACCCTTCGTTCTCCGCTAACTCGCGCAGATACTGGAAAATCTGGCGTGCGGATTTCNGCGGCTTATTCCCTTCTTTCTCTTTCTTCGCGTTGCGGATCAGAGTACGCAGTTGCTGACGATCGGCATCGGGCCACAGATTTAATACCt < 1:522428‑M1/274‑1 (MQ=255) | AGGTCGTGCCGATGAAGTCTTCCTGCTGCAACCGGCGCATATTCCGTGGCAGGTGGCAGAAGTGGCAGAAGCCTGCGTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTGGTGGGATCCATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAATTACCCTTCGTTCTCCGCTAACTCGCGCAGATACTGGAAAATCTGGCGTGCGGATTTCGGCGGCTTATTCCCTTCTTTCTCTTTCTTCGCGTTGCGGATCAGAGTACGCAGTTGCTGACGATCGGCATCGGGCCACAGATTTAATACCT > CP009273/4446735‑4447279 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |