New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	77122 =	72 (1.870)	8 (0.220)	7/292	NT	11.3%	coding (230/1401 nt)	leuC	3‑isopropylmalate dehydratase large subunit
	?	CP009273	77244 =	59 (1.650)					coding (108/1401 nt)	leuC	3‑isopropylmalate dehydratase large subunit

GCCGCAGACAATGGTCATCCCCGGCAAGGTGACGCCCTGTTCCGGCCCCATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGAACAATTTTTCGTATAACGTCTTAGCCATGATTACACCCCTTCTGCTACATAGCGGGCAATGATATCGCCCATTTCATCGGTACTAACGGCGGCAGCGCCACGGGCTAAATCCCCGGTGCGAATGCCTTCTTCTAATGCGCGGTTAATGGCGCGTTCAATGGCGCAAGCCGCATCATCGGCATCCAGG  >  CP009273/76971‑77510                                                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                                           gccgcAGACAATGGTCATCCCCGGCAAGATGACGCCCTGTTCCGGCCCCATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCACATTCTTTGCAGTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATAAATGTCTTTGGTCTGGGTNGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAg                                                                                                                                                                                                                                                                            >  1:531211/1‑274 (MQ=255)                      cGGCAAGGTGACGCCCTGTTCCGGCCCCATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTc                                                                                                                                                                                                                                                                         <  2:626785/256‑1 (MQ=255)                        gCAAGGTGACGCCCTGTTCCGGCCCCATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCgg                                                                                                                                                                                                                                                    >  1:82194/1‑275 (MQ=255)                         cgtggagtcGCCCTGTTCCGGCCCCAGTACGTGGACGATCCCCTGATACTGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGt                                                                                                                                                                                                                                                   <  2:83377/267‑1 (MQ=255)                         catggggacgacCTGTTCCGGCCCCATTACGTGGACGTTCCCCTGTTACGGTTGATTCATGTCATACTGTTCGACGCCAAATTCTTTGCAGTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGAGCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGt                                                                                                                                                                                                                                                   <  2:667898/269‑1 (MQ=255)                         cagggTGACGCCCTGTTCCTGCCCCATTACTTGGTCGTTCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTTTTTGCAGTTTGTGATCAATTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTGATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGt                                                                                                                                                                                                                                                   <  2:326406/272‑1 (MQ=255)                         cagggTGACGCCCTGTTCCGGCCCCATTACGTTGACGGTCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGt                                                                                                                                                                                                                                                   <  1:155266/272‑1 (MQ=255)                                 cGCCCTGTTCCGGCCCCATTATGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGatatat                                                                                                                                                                                                                                           <  1:133594/275‑1 (MQ=255)                                  gcgcgtttCCGGCCCCAGTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTGATAAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGatatat                                                                                                                                                                                                                                           <  2:82193/268‑1 (MQ=255)                                             gCCCCATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCTCGGCTGACNTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAAcctgtccct                                                                                                                                                                                                                                >  1:564339/1‑266 (MQ=255)                                             gCCCCATTACATGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACTGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGtt                                                                                                                                                                                                                               >  1:705055/1‑275 (MQ=255)                                                        tGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCTGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTgg                                                                                                                                                                                                                                                       >  1:404970/1‑240 (MQ=255)                                                                         cGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGTGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACtt                                                                                                                                                                                                                                                                     <  1:585863/209‑1 (MQ=255)                                                                               aTTCAGGTCATTCAGTTCGACGCCTAATTCTTTGCAGTTTTTGATCAGGTCCTGCATCTGGATACGCGCCATTTCACCGCTGGCATTAATGTCTTTGGTCGTGGTAGAGACGTTGTTCTCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGTTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGa                                                                                                                                                                                             <  1:267062/275‑1 (MQ=255)                                                                                              ttCGACGCCAAAGTCTTTGCAGTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCACGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTgg                                                                                                                                                                                                                                                       >  2:605174/1‑202 (MQ=255)                                                                                                  aCGCCAAATTCTTTGCAGTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGt                                                                                                                                                                                                                                                   <  1:605183/202‑1 (MQ=255)                                                                                                   cGCCAAATTCTTTGCAGTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGAACAATTTTTCGTATAACGTc                                                                                                                                                                         >  1:277386/1‑275 (MQ=255)                                                                                                   cGCCAAATTCTTTGCAGCTTTTGATCAGTTCGTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTCGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGATCGTTGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCCGGTGGCGGTCGATATATAACAATGGGGGTACTTTTTCGGCTTCGTACACCACGAGAGCGTGGAACAAttttttggatccattc                                                                                                                                                                         >  2:598427/1‑264 (MQ=255)                                                                                                      cAAATTCTTTGCAGTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTgg                                                                                                                                                                                                                                                       >  1:585521/1‑194 (MQ=255)                                                                                                         tttttttgtggTTTTTGTTTAGTTCCTGCATCTGGATACGGGCCATTTCACCGGAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATCGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGAACAATTTTTCGTATAACGTCTTAGcc                                                                                                                                                                   <  1:382189/265‑1 (MQ=255)                                                                                                          ttCTTTGCAGTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGt                                                                                                                                                                                                                                                   <  2:585512/194‑1 (MQ=255)                                                                                                                  atggtttgttgtcttCATGAATTNGGATACGCGCCATTTCACCGCAGCTATTTATGTCTTTGGTCTGGGTAGAGGCGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGAACAATTTTTCGTATAACGTCTTAGCCATGATTac                                                                                                                                                           <  2:410956/261‑1 (MQ=255)                                                                                                                      tttGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGAACAATTTTTCGTATAACGTCTTAGCCATGATTACAcccc                                                                                                                                                      <  1:285260/275‑1 (MQ=255)                                                                                                                        tGATCTGTTCCTGCCTCTGGATACGCGCCATTTCACCGCAGGCAGTAATGTCTTTGGTCTGGGTAGAGCCGTTGTGATCCATGGTAGCGAAGGTGTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGAACAATTTTTCGTATAACGTCTTAGCCATGATTACACCCCtt                                                                                                                                                    <  2:705045/275‑1 (MQ=255)                                                                                                                                         tGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGCCCATCGAACGCCTTCGGTGATGTCACTCCATGCGACCGGTGGCGGTCGgtat                                                                                                                                                                                                                                             >  2:330956/1‑169 (MQ=255)                                                                                                                                             tANGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGGCGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGTTATATAACCGTGGGGTTTCGtttt                                                                                                                                                                                                                        <  1:497406/186‑1 (MQ=255)                                                                                                                                             tACGCGCCATTTCACCGCAGGCATTAATGTCGTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATaa                                                                                                                                                                                                                                         <  1:330962/169‑1 (MQ=255)                                                                                                                                                 cgcCATTTCACCGCAGGCATTAATGTCTTTGGTATGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGGCCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGAACAATTTTTCGTATAACGTCTTAACCATGATTACACCCCTTCTGCAACAAAACGGGCAATAATATc                                                                                                                           >  1:37713/1‑275 (MQ=255)                                                                                                                                                     aTTTCACCGCAGGCATTAAAGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGAACAATTTTTCGTATAACGTCt                                                                                                                                                                        >  1:573825/1‑226 (MQ=255)                                                                                                                                                          ACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCg                                                                                                                                                                                                                      <  1:379093‑M1/175‑1 (MQ=255)                                                                                                                                                              CAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTgg                                                                                                                                                                                                                                                       <  1:517816‑M1/138‑1 (MQ=255)                                                                                                                                                                  CATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGt                                                                                                                                                                                                                                                   >  2:517809‑M1/1‑138 (MQ=255)                                                                                                                                                                                      agagatgcGTTATGATCCATGGTAGCAAAGTTGTTGCCCGCCTGACGGTCCCGGCGACCGTTGGTGCGCAGACTAGCTAACGCCTGCGGTGATGTCACTTCATGCTCCAGGTGGCGGTCGAGAGATAACAGTGGGGTTTCGTTTTCGGCTTCTTACACAACGTGAGCGTCGAACAATTTATCGTATAACGTATTAGCCATCATTACACCCCTTCTGCTACATTGCGGGCAATGATATCGCCCATTTCATCGGTACTAACGGCGGCAGCGCCACgg                                                                                      <  2:37713/268‑1 (MQ=255)                                                                                                                                                                                          gtcgcccggtacgtcagccgggcaaaaccttcgctaccatggatcacaacgtctctacccagaccaaagacattaatgcctgcggtgaGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGAACAATTTTTCGTATAACGTCTTAGCCATGATTACACCCCTTCTGCTACATAGCGGGCAATGATATCGCCCATTTCATCGGTACTAACGGCGGCAGCGCCACGGGCTa                                                                                  >  1:262260‑M2/89‑275 (MQ=255)                                                                                                                                                                                          agaCGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTgg                                                                                                                                                                                                                                                       >  1:321044/1‑110 (MQ=255)                                                                                                                                                                                              gTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGt                                                                                                                                                                                                                                                   <  2:321038/110‑1 (MQ=255)                                                                                                                                                                                               ttGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTgg                                                                                                                                                                                                                                                       >  1:356439/1‑105 (MQ=255)                                                                                                                                                                                                  tgacacaggggaGNGAAGGTTTGGCACGGCGGCCGTACCGGTCAACCGTGGGCGCGCAGACCATCGAACGCCTGCTGGGAGGTCACTGCATGCACCAGGGGGCGGTCGATATATAACAGTTGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGAACAATTTTTCGTATAACGTCTTAGCCATGATTACACCCCTTCTGCTACATAGCGGGCAATGATATCGCCCATTTCATCGGTACTAACGGCGGCAGCGCCACGGGCTAAATcccc                                                                           <  2:531203/263‑1 (MQ=255)                                                                                                                                                                                                   tacgtcagccgggcaaaaccttcgctaccatggatcacaacgtctctacccagaccaaagacattaatgcctgcggtgaGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGAAc                                                                                                                                                                                           >  1:367605‑M2/80‑161 (MQ=255)                                                                                                                                                                                                   gATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGt                                                                                                                                                                                                                                                   <  2:356433/105‑1 (MQ=255)                                                                                                                                                                                                      ccATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGAACAATTTTTCGTATAACGTCTTAGCCATGATTACACCCCTTCTGCTACATAACGGGAAATGAAATAGCCCATTTCATAGATATTAAGGGCGGCAGCGCCACGGGCTAAATCCCCAGTg                                                                       >  2:170700/1‑274 (MQ=255)                                                                                                                                                                                                       tcagccgggcaaaaccttcgctaccatggatcacaacgtctctacccagaccaaagacattaatgcctgcggtgaGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGAACAAtt                                                                                                                                                                                       <  2:367599‑M2/86‑1 (MQ=255)                                                                                                                                                                                                         tGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCa                                                                                                                                                                                                                                                                        >  1:352479/1‑78 (MQ=255)                                                                                                                                                                                                         tGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGt                                                                                                                                                                                                >  1:713473/1‑150 (MQ=255)                                                                                                                                                                                                         tGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGAACAATTTTTCGTATAACGTCTTAGCCATGATTACACCCCTTCTGCTAc                                                                                                                                             >  1:30952/1‑201 (MQ=255)                                                                                                                                                                                                         tGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGAACAATTTTTCGTATAACGTCTTAGCCATGATTACACCCCTTCTGCTACATAGCGGGCAATGATATCgtgctggca                                                                                                                  >  1:67394/1‑220 (MQ=255)                                                                                                                                                                                                          ggTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTACGTTTTCGGCTTCGTACACAACGTGAGCGTCGCACAATTTTTCGTATAACGTCTTAGCCATGATTACACCCCTTCTGCTACATATCAGGCAATGATATCGCCCCTTACATATGAACTAACGGCGGCAGCGACCCGGGCTAACTGCCCgttccggg                                                                   >  2:596295/1‑267 (MQ=255)                                                                                                                                                                                                             aGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTc                                                                                                                                                                                                                                                                    <  2:352473/78‑1 (MQ=255)                                                                                                                                                                                                             aGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGaa                                                                                                                                                                                            <  2:713463/150‑1 (MQ=255)                                                                                                                                                                                                             aGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGAACAATTTTTCGTATAACGTCTTAGCCATGATTACACCCCTTCTGCTACATAg                                                                                                                                         <  2:30952/201‑1 (MQ=255)                                                                                                                                                                                                              gCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGAACAATTTTTCGTATAACGTCTTAGCCATGATTACACCCCTTCTGCTACATAGCGGGCAATGATATCGCCCATTTCATc                                                                                                               >  2:35762/1‑226 (MQ=255)                                                                                                                                                                                                                gAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGAtatata                                                                                                                                                                                                                                          >  2:121371/1‑101 (MQ=255)                                                                                                                                                                                                                 aaGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAAc                                                                                                                                                                                                                                        >  1:65889/1‑102 (MQ=255)                                                                                                                                                                                                                  gggcaaaaccttcgctaccatggatcacaacgtctctacccagaccatcgaacgcctgcggtgaGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGAACAATTTTTCGTATAACGTCTTAGCCATGATTACACCCCTTCTGCTACATa                                                                                                                                          >  1:572139‑M2/65‑195 (MQ=255)                                                                                                                                                                                                                  aGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGt                                                                                                                                                                                                                                                   <  1:583570/90‑1 (MQ=255)                                                                                                                                                                                                                  aGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGAACAATTTTTCGTATAACGTCTTAGCCATGATTACACCCCTTCTGCTACATAGCGGGCAATGATATCGCCCATTTCATCGGTa                                                                                                           <  1:35762/226‑1 (MQ=255)                                                                                                                                                                                                                    gTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAg                                                                                                                                                                                                                                      <  1:121372/101‑1 (MQ=255)                                                                                                                                                                                                                     ttttGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTg                                                                                                                                                                                                                                    <  2:65888/102‑1 (MQ=255)                                                                                                                                                                                                                      aaaaccttcgctaccatggatcacaacgtctctacccagaccatcgaacgcctgcggtgaGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGAACAATTTTTCGTATAACGTCTTAGCCATGATTACACCCCTTCTGCTACATAGCgg                                                                                                                                      <  2:572130‑M2/135‑1 (MQ=255)                                                                                                                                                                                                                          cctaccatgcctcacaacgtctctacccataccaaagacattaatgtctgcgatgaGGTTACTTCAGGCACCAGGTGGCGGCCGATACATAACAGTGGGGTTTCGATTTCGGCGTCGTACACAACGTGAGCGTCGAACAATTTTTCGTATAACGTCTTAGCCATGATTACAAACCTTCTGCTACATAGCGGGCAATGATATCGCCCATGTCATCGATACTAACGGCGGCAGCTCCACGGGGGAATTCCACGCGCCGAATGCCTTcttctaccacg                                                  >  2:218207‑M2/57‑270 (MQ=255)                                                                                                                                                                                                                          cccGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCCAACGCCTGCGGTGAGGTCGCTTCATGCACCAGCTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGAACAATTTTTCGTATAACGTCTTAGCCATGATTACAcccc                                                                                                                                                      <  1:60560/175‑1 (MQ=255)                                                                                                                                                                                                                               cTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGtt                                                                                                                                                                                                                          >  2:456773/1‑102 (MQ=255)                                                                                                                                                                                                                                   cGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCg                                                                                                                                                                                                                      <  1:456780/102‑1 (MQ=255)                                                                                                                                                                                                                                     tACCGGGCGACTGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTGCGGCTTCGTACACAACGTGAGCGTCGAACAATTTTTCGTATAACGTCTTAGCCATGATTACACCCCTTCTGCTACATAGCGGGCAATGATATCGCCCATTTCATCGGTACTAACGGCGGCAGCGCCACGGGCTAAATCCCCGGTGCGAATGCCTTCTTCTAATGCGCGGTTAATGgc                                       <  1:404576/275‑1 (MQ=255)                                                                                                                                                                                                                                         gggCGACCGTGGGCGCGCAGACCAGCGAGCGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGAACAATTTTTCGTATAACGTCTTAGCCATGATTACACCCCTTCTGCTACATAGCGGGCACTGANATCTCCCATTTCATCGGTACTCACGGCGGCAGCGCCACGGGCTAAATCCCCGGTGCGAATGCCTTCTTCTAATGAGCGGTTAATGGcgcg                                    >  1:511330/1‑274 (MQ=255)                                                                                                                                                                                                                                            cGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTgg                                                                                                                                                                                                                                                       >  1:387078/1‑60 (MQ=255)                                                                                                                                                                                                                                             tctctacccagaccaaagacattaatgcctgcggtgaGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGaa                                                                                                                                                                                            >  2:357201‑M2/38‑118 (MQ=255)                                                                                                                                                                                                                                                cGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGt                                                                                                                                                                                                                                                   <  2:387072/60‑1 (MQ=255)                                                                                                                                                                                                                                                 tacccagaccaaagacattaatgcctgcggtgaGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGAACAAt                                                                                                                                                                                        <  1:357207‑M2/85‑1 (MQ=255)                                                                                                                                                                                                                                                    ggCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCg                                                                                                                                                                                                                      >  1:584876/1‑85 (MQ=255)                                                                                                                                                                                                                                                        cgcAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCtt                                                                                                                                                                                                                  <  2:584867/85‑1 (MQ=255)                                                                                                                                                                                                                                                         gcAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGAACAATTTTTCGTATAACGTCTTa                                                                                                                                                                      >  2:634006/1‑128 (MQ=255)                                                                                                                                                                                                                                                                 tCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGtt                                                                                                                                                                                                                          >  2:699958/1‑68 (MQ=255)                                                                                                                                                                                                                                                                     aCGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCg                                                                                                                                                                                                                      <  1:699967/68‑1 (MQ=255)                                                                                                                                                                                                                                                                         ctgcggtgaGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGAACAATTTTTCGTATAACGTCTTAGCCATGATTACACCCCTTCTGCTACATAGCGGGCAATGATATCGCCCATTTCATCGGTACTAACGGCGGCAGCTCCACGGGCTAAATCCCCGGTGCGAATGCCTTCTTCTACTGCGCGGTTAATGGCGCGTTCCATTGCGCAAGCCGCATCCTCCGCATCCa    >  1:10268‑M2/10‑274 (MQ=255)                                                                                                                                                                                                                                                                         cTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGAACAATTTTTCGTATAACGTCTTAGCCATGATTACACCCCTTCTGCTACATAGcgggcaaaaccttcgctaccatggatcacaacgtctctacccagac                                                                                           <  2:530068‑M2/187‑47 (MQ=255)                                                                                                                                                                                                                                                                           gcggtgaGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGAACAATTTTTCGTATAACGTCTTAGCCATGATTACACCCCTTCTGCTACATAGCGGGCAATGATATCGCCCATTTCATCGGTACTAACGGCGGCAGCGCCCCGGGCTAAATCCCCGGTGCGAATGCCTTGTTCGAATGACCGGTTACTGTCGCGTTCCATGGCGCACGCCCACTCACTGGCATCCAgg  >  1:153145‑M2/8‑274 (MQ=255)                                                                                                                                                                                                                                                                             ggTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGAACAATTTTTCGTATAACGTCTTAGCCATGATTACACCCCTTCTGCTACATAGcgggcaaaaccttcgctaccacggatcacaacgtctctacccagaccaaa                                                                                       >  1:530076‑M2/1‑137 (MQ=255)                                                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                                           GCCGCAGACAATGGTCATCCCCGGCAAGGTGACGCCCTGTTCCGGCCCCATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGAACAATTTTTCGTATAACGTCTTAGCCATGATTACACCCCTTCTGCTACATAGCGGGCAATGATATCGCCCATTTCATCGGTACTAACGGCGGCAGCGCCACGGGCTAAATCCCCGGTGCGAATGCCTTCTTCTAATGCGCGGTTAATGGCGCGTTCAATGGCGCAAGCCGCATCATCGGCATCCAGG  >  CP009273/76971‑77510

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.