New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	127834 =	61 (1.590)	4 (0.110)	4/298	NT	7.6%	intergenic (‑87/‑268)	yacH/acnB	uncharacterized protein/bifunctional aconitate hydratase 2/2‑methylisocitrate dehydratase
	?	CP009273	127989 =	40 (1.100)					intergenic (‑242/‑113)	yacH/acnB	uncharacterized protein/bifunctional aconitate hydratase 2/2‑methylisocitrate dehydratase

ATTCGGATCTCAAGGAAATCGCAATGGTCGGCGAACTGCCACCCGCAGGTGCTGTGAATCCGAGTATAAAGAGGCGGTAGTTTAAATTTTGACTAATCTTGGGATTCGTTGAGAAAGGTGATTATCACCATGCGAATTAACGAAGTTTTTACGGAGGGAAACAATCTCTAGACCATCCTTAACGATTCAGCCACTTTTTTATGTTGCTTTTTTGTAAACAGATTAACACCTCGTCAAAATCCTGCTATTCTGCCCGTTGCGGTACTGGGCATTTACCCTACAAACTGCTGTCTCACAGGAGCGTGAAGAGAATCGCCTGCCGCACTATGACAATGAGAGCGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTT  >  CP009273/127749‑128260                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                                                aTTCGGTGCTCAAGGAAATCGCAATGGTCGGCGAACTGCCACCCGCAGGGGCTGTGAATCCGAGTATAAAGAGGCGGTAGTTNAAATTTTGNCTAATCTTGGGATTCGTTGAGAAAGGTGATTATCACCATGCGAATTAACGAAGTTTTTACGGAGGGAAACAATCTCTAGACCATCCTTAACGATTCAGCCACTTTTTTATGTTGCTTTTTTGTAAACAGATTAACACCTCGTCAAAATCCTGCTATACTGCCCGTTGCGGTACTGGGCATTTa                                                                                                                                                                                                                                               <  1:477124/275‑1 (MQ=255)       aTCTCAAGGAAATCGCAATGGTCGGCGAACTGCCACCCGCAGGTGCTGTGAATCCGAGTATAAAGAGGCGGTAGTTTAAATTTTGACTAATCTTGGGATTCGTTGAGAAAGGTGATTATCACCATGCGAATTAACGAAGTTTTTACGGAGGGAAACAATCTCTAGACCATCCTTAACGATTCAGCCACTTTTTTATGTTGCTTTTTTGTAAACAGATTAACACCTCGTCAAAATCCTGCTATTCTGCCCGTTg                                                                                                                                                                                                                                                               >  1:299616/1‑253 (MQ=255)       aTCTCAAGGAAATCGCAATGGTCGGCGAACTGCCACCCGCAGGTGCTGTGAATCCGAGTATAAAGAGGCGGTAGTTTAAATTTTGACTAATCTTGGGATTCGTTGAGAAAGGTGATTATCACCATGCGAATTAACGAAGTTTTTACGGAGGGAAACAATCTCTAGACCATCCTTAACGATTCAGCCACTTTTTTATGTTGCTTTTTTGTAAACAGATTAACACCTCGTCAAAATCCTGCTATTCTGCCCGTTg                                                                                                                                                                                                                                                               <  2:299610/253‑1 (MQ=255)                                                                 tatgAAGAGGCGGTAGTTTAAATTTTGACTAATCTTGGGATTCGTTGAGAAAGGTGATTATCACCATGCGAATTAACGAAGTTTTTACGGCGGGAAACAATCGCTAGACCATCCTTAACTATTCAGCCACTTTTTTATGTTGCTTTTTGGTAAACAGATTAACACCTCGCCAAAATCCTGCTATTCTGACCGTCGCGGACCTGGCCATTTACCCTACAAACTGCCATCCCACAGGAGCGGGAAGTGAACCGCCGGCCGCACtcgtacactgcg                                                                                                                                                                                 >  2:667710/1‑262 (MQ=255)                                                                      agagGCGGTAGTTTAAATTTTGACTAATCTTGGGATTCGTTTAGAAAGGTGATTATCACCATGCGAATTAACGAAGTTTTTACGGAGGGAAACAATCTCTAGACCATCCTTAACGATTCAGTCACTTATTTATGTTGCTTTTTTGTAAACAGATTAACACCTCGTCAAAATCCTGCTATTCTGCCCGTTGCGGTACTGGGCATTTACCCTACAAACTGCTGTCTCACAGGAGCGTGAAGAGAATCGCCTGCCGCACTATGACAATGAGAGCgag                                                                                                                                                                           <  1:632691/274‑1 (MQ=255)                                                                           cGGTAGTTTAAATTTTGACTAATCTTGGGATTCGTTGAGAAAGGTGATTATCACCATGCGAATTAACGAAGTTTTTACGGAGGAAAACAATCACTAGACCATCCTTAACGATTCAGCTACTTTTTTATGTTGCTTTTTTGTAAACAGATTAACACATCGTCAAACTCCTGCTATTCTTCCCGTTGCTGTACTGGGCATTTACCATACAACCTGCTGTCTCACCGGCGCGTGAAGAGAAGCGCCTGCCGCACCATGCCAATGAGAGCGAGgagac                                                                                                                                                                      >  2:300073/1‑273 (MQ=255)                                                                             gTAGTTTAAATTTTGACTAATCTTGGGATTCGTTGAGAAAGGTGATTATCACCATGCGAATTAACGAAGTTTTTACGGAGGGAAACAATCTCTAGACCATCCTTAACGATTCAGCCACTTTTTTATGTTGCTTTTTTGTGAACAGATTAACACCTCGTCAAAATCCTg                                                                                                                                                                                                                                                                              <  1:513697/168‑1 (MQ=255)                                                                                   tAAATTTTTACTAATCTTTGGATTCGTTGAGAAAGGTGATTATCACCATGCGAATTAACGAAGTTTTTACGGAGGGAAACAATCTCTAGACCATCCTTAACGATTCAGCCACTTTTTTATGTTGCTTTTTTGTAAACAGATTAACACCTCGTCAAAATCCTGCTATTCTGCCCGTTGCGGTACTGGGCATTTACCCTACAAACTGCTGTCTCACAGGAGCGTGAAGAGAATCGCCTGCCGCACTATGACAATGAGAGCGAGGAGAACCGTCGTGc                                                                                                                                                             <  1:349275/275‑1 (MQ=255)                                                                                                   ttGGGATTCGTTGAGAAAGGTGATTATCACCATGCGAATTAACGAAGTTTTTACGGAGGGAAACAATCTCTAGACCATCCTTAACGATTCAGCCACTTTTTTATGTTGCTTTTTTGTAAACAGATTAACACCTCGTCAAAATCCTGCTATTCTGCCCGTTGCGGTACTGGGCATTTACCCTACAAACTGCTGTCTCACAGGAGCGTGAAGAGAATCGCCTGCCGCACTATGACAATGAGAGCGAGGAGAACCGTCGTGCTAGAAGAATACCGTaa                                                                                                                                             <  1:670372/275‑1 (MQ=255)                                                                                                          tgtttacaaaaaagcaacataaaaaagtggctgaatcgttaaggatggtctagagattgtttccctccgtaaaaacttcgttaattcgcatggtgataatcacctttctcaacgaatcccaagattagtcaaaatCCTGCTATTCTGCCCGTTGCGGTACTGGGCATTTACCCTACAAACTGCTGTCTCACAGGAGCGTGAAGAGAATCGCCTGCCg                                                                                                                                                                                                >  1:52880‑M2/136‑217 (MQ=255)                                                                                                           cGTTGAGAAAGGTGATTATCACCATGCGAATTAACGAAGTTTTTACGGAGGGCAACAATCTCTAGACCATCCTTAACGATTCAGCCACTTTTTTATGTTGCTTTTTTGTAAACAGATTAACACCTCGTCAAAATCCTGCTATTCTGCCCGTTGCGGTACTGGGCATTTACCCTACAAACTGCTGTCTCACAGGAGCGTGAAGAGAATCGCCTGCCGCACTATGACAAGGAGGGCGAGGAGAACCGTAGTGCTAGAAGAATACCGTAAGCACg                                                                                                                                        >  1:144071/1‑272 (MQ=255)                                                                                                              tacaaaaaagcaacataaaaaagtggctgaatcgttaaggatggtctagagattgtttccctccgtaaaaacttcgttaattcgcatggtgataatcacctttctcaacgaatcccaagattagtcaaaatCCTGCTATTCTGCCCGTTGCGGTACTGGGCATTTACCCTACAAACTGCTGTCTCACAGGAGCGTGAAGAGAATCGCCTGCCGCACt                                                                                                                                                                                            <  2:52880‑M2/86‑1 (MQ=255)                                                                                                                    aaagcaacataaaaaagtggcggaatcgttaaggatggtctagagattgtttccctccgtaaaaacttcgttaattcgcatggtgataatcacctttctcaacgaatcccaagattagtcaaaatCCTGCTATTCTGCCCGTTGCGGTACTGGGCATTTACCCTACAAACTGCTGTCTCACAGNAGCGTGAAGAGAATCGCCTGCCGCACTATGACAATGAGAGCGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTg                                                                                                                            >  1:495966‑M2/126‑275 (MQ=255)                                                                                                                                 cATGCGAATTAACGAAGTTTTTACGGAGGGAAACAATCTCTAGACCATCCTTAACGATTCAGCCACTTTTTTATGTTGCTTTTTTGTAAACAGATTAACACCTCGTCAAAATCCTGCTATTCTGCCCGTTGCGGTACTGGGCATTTACCCTACAAACTGCTGTCTCACAGGAGCGTGGAGAGAATCGCCTGCAGCACTATGACAATGAGAGCGAGGAGAACCGTCGAGCTAGAAGAATACAGTAAGCACGTAGATGAGCGTGCCGCTGAGGGGa                                                                                                                >  1:388155/1‑274 (MQ=255)                                                                                                                                  aTGCGAATTAACGAAGTTTTTACGGAGGGAAACAATCTCTAGACCATCCTTAACGATTCAGCCACTTTTTTATGTTGCTTTTTTGTAAACAGATTAACACCTCGTCAAAATCCTGCTATTCTGCCCGTTGCGGTACTGGGCATTTACCCTACAAACTGCTGTCTCACAGGAGCGTGAGGAGAATCGCCTGCCg                                                                                                                                                                                                >  1:395283/1‑193 (MQ=255)                                                                                                                                      gAATTAACGAAGTTTTTACGGAGGGAAACAATCTCTAGACCATCCTTAACGATTCAGCCACTTTTTTATGTTGCTTTTTTGTAAACAGATTAACACCTCGTCAAAATCCTGCTATTCTGCCCGTTGCGGTACTGGGCATTTACCCTACAAACTGCTGTCTCACAGGAGCGTGAAGAGAATCGCCTGCCGCACt                                                                                                                                                                                            <  2:395276/193‑1 (MQ=255)                                                                                                                                           taaagttaaggatggtctataagttttttccctccgtaaaaacttcgttaattcgcatggtgataatcacatttctcaacgaatcccaagattagtcaaaatCCTGCTATTCTGCCAGTTGCGGTACTGGGCATTTACCCTACAAACTGCTGTCTCACAGGAGCGTGAAGAGAATCGCCTGCCGCACTATGACAATGAGAGCGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCaaa                                                                                                     <  2:495959‑M2/173‑1 (MQ=255)                                                                                                                                                           aGGGAAACAATCTCTAGACCATCCTTAACGATTCAGCCACTTTTTTATGTTGCTTTTTTGTAAACATATTAACACCTCGTCAAAATCCTGCTATTCTGCCCGTTGCGGTACTGGGCATTTACCCTACAAACTGCTGTCTCACAGGAGCGTGAAGAGAATCGACTGCCGCACTATGACAATGAGAGCGAGGAGAACCGTCGTGCTAGAAGCATACCTTAAGCAAGAAGCTGCACGTGCCGCGGTGGGGATTTCGCCCAACccccctctttcctcac                                                                                     >  2:590541/1‑263 (MQ=255)                                                                                                                                                                    aattttcaacaaTCCTTAACGTTTTANACACTTTTTTATGTTGCTTTTTTGTAAATAGATTAACACCTCGTCAAAATCCTTCTATTCTGCCCGTTGCGGTACTGGGCATTTACCCTACAAACTGCTGTCTCACAGGAGCGTGAAGAGAATCGCCTGCCGCACTATGACAATGAGAGCGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCg                                                                            <  2:462618/264‑1 (MQ=255)                                                                                                                                                                    aTCTCTAGACCATCCTTATCGATTCATCCACTTTTTTATGTTGCTTTTTTGTAAACAGATTAACACCTCGTCAAAATCCTGCTATTCTGCCCGTTGCGGTACTGGGCATTTACCCTACAAACTGCTGTCTCACAGGAGCGTGAAGAGAATCGCCTGCCGCACTATGACAATGAGAGCGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCg                                                                            <  1:300079/275‑1 (MQ=255)                                                                                                                                                                         tAGACCATCCTTAACGATTCAGCCACTTTTTTATGTTGCTTTTTTGTAAACAGATTAACACCTCGTCAAAATc                                                                                                                                                                                                                                                                                 >  1:236433/1‑73 (MQ=255)                                                                                                                                                                             ccATCCTTAACGATTCAGCCACTTTTTTATGTTGCTTTTTTGTAAACAGATTAACACCTCGTCAAAATCCTGc                                                                                                                                                                                                                                                                             <  2:236428/73‑1 (MQ=255)                                                                                                                                                                                tCCTTAACGATTCAGCCACTTTTTTATGTTGCTTTTTTGTAAACAGATTAACACCTCGTCAAAATCCTGCTATTc                                                                                                                                                                                                                                                                        >  1:565748/1‑75 (MQ=255)                                                                                                                                                                                tCCTTAACGATTCAGCCACTTTTTTATGTTGCTTTTTTGTAAACAGATTAACACCTCGTCAAAATCCTGCTATTc                                                                                                                                                                                                                                                                        >  1:552676/1‑75 (MQ=255)                                                                                                                                                                                tCCTTAACGATTCAGCCACTTTTTTATGTTGCTTTTTTGTAAACAGATTAACACCTCGTCAAAATCCTGCTATTCTGccc                                                                                                                                                                                                                                                                   >  1:308915/1‑80 (MQ=255)                                                                                                                                                                                tCCTTAACGATTCAGCCACTTTTTTATGTTGCTTTTTTGTAAACAGATTAACACCTCGTCAAAATCCTGCTATTCTGCCCGTTGCGGt                                                                                                                                                                                                                                                           >  1:712734/1‑88 (MQ=255)                                                                                                                                                                                tCCTTAACGATTCAGCCACTTTTTTATGTTGCTTTTTTGTAAACAGATTAACACCTCGTCAAAATCCTGCTATTCTGCCCGTTGCGGTACTGGGCATTTACCCTACAAACTGCTGtct                                                                                                                                                                                                                             >  2:597098/1‑118 (MQ=255)                                                                                                                                                                                tCCTTAACGATTCAGCCACTTTTTTATGTTGCTTTTTTGTAAACAGATTAACACCTCGTCAAAATCCTGCTATTCTGCCCGTTGCGGTACTGGGCATTTACCCTACAAACTGCTGTCTCACAGGAGCGTGAAGAGAATCGCCTGCCGAACTATGACAANGAGAGCGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAggg                                                                                                                  >  1:647873/1‑225 (MQ=255)                                                                                                                                                                                 ccTTAACGATTCAGCCACTTTTTTATGTTGCTTTTTTGTAAACAGATTAACACCTCGTCAAAATCCTGCTATTCTGCCCGTTGCGGTACTGGGCATTTACCCTACAAACTGCTGTCTCACAGGAGCGTGAAGAGAATCGCCTGCCGCACTATGACAATGAGAGCGAGGAGAACCGTCGTGCTAGAAGAATa                                                                                                                                                   >  1:324739/1‑191 (MQ=255)                                                                                                                                                                                    tAACGATTCAGCCACTTTTTTATGTTGCTTTTTTGTAAACAGATTAACACCTCGTCAAAATCCTGCTATTCTGcc                                                                                                                                                                                                                                                                    <  2:552667/75‑1 (MQ=255)                                                                                                                                                                                    tAACGATTCAGCCACTTTTTTATGTTGCTTTTTTGTAAACAGATTAACACCTCGTCAAAATCCTGCTATTCTGcc                                                                                                                                                                                                                                                                    <  2:565739/75‑1 (MQ=255)                                                                                                                                                                                    tAACGATTCAGCCACTTTTTTATGTTGCTTTTTTGTAAACAGATTAACACCTCGTCAAAATCCTGCTATTCTGCCCGTTg                                                                                                                                                                                                                                                               <  2:308909/80‑1 (MQ=255)                                                                                                                                                                                    tAACGATTCAGCCACTTTTTTATGTTGCTTTTTTGTAAACAGATTAACACCTCGTCAAAATCCTGCTATTCTGCCCGTTGCGGTACTg                                                                                                                                                                                                                                                       <  2:712724/88‑1 (MQ=255)                                                                                                                                                                                    tAACGATTCAGCCACTTTTTTATGTTGCTTTTTTGTAAACAGATTAACACCTCGTCAAAATCCTGCTATTCTGCCCGTTGCGGTACTGGGCATTTACCCTACAAACTGCTGTCTcaca                                                                                                                                                                                                                         <  1:597107/118‑1 (MQ=255)                                                                                                                                                                                     aaCGTTTCTTCCACTTTTTTATGTTGCTTTTTTGTAAACAGATTAACACCTCGTCAAAATCCTGCTATTCTGNCCGTTGCGGTACTGGGCATTTACCCTACAAACTGCTGTCTCACAGGAGCGTGAAGAGAATCGCCTGCCGCACTATGACAATGAGAGCGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCTGCCAGCCCCCTGGTTGCAAACCAAATGGc                                                                              <  1:506053/256‑1 (MQ=255)                                                                                                                                                                                     aaCGATTCAGCCACTTTTTTATGTTGCTTTTTTGTAAACAGATTAACACCTCGTCAAAATCCTGCTATTCTGCCCGTTGCGGTACTGGGCATTTACCCTACAAACTGCTGTCTCACAGGAGCGTGAAGAGAATCGCCTGCCGCACTATGACAATGAGAGCGAGGAGAACCGTCGTGCTAGAAGAATACCGt                                                                                                                                               <  2:324733/191‑1 (MQ=255)                                                                                                                                                                                      aCGATTCAGCCACTTTTTTATGTTGCTTTTTTGTAAACAGATTAACACCTCGTCAAAATCCTGCTATTCTGCCCGTTGCGGTACTGGGCATTTACCCTACaaa                                                                                                                                                                                                                                      >  1:622329/1‑103 (MQ=255)                                                                                                                                                                                          ttCAGCCACTTTTTTATGTTGCTTTTTTGTAAACAGATTAACACCTCGTCAAAATCCTGCTATTCTGCCCGTTGCGGTACTGGGCATTTACCCTACAAActgc                                                                                                                                                                                                                                  <  2:622320/103‑1 (MQ=255)                                                                                                                                                                                               ctccTTTTTTA‑GTTGCTTTTTTGTAAACAGATTAACAACCCGTCAAAATCCTTGTTTTCCGCCCGCTGCGGGTATGGGCATTTCCCCTACAAAc                                                                                                                                                                                                                                     <  1:598426/91‑1 (MQ=255)                                                                                                                                                                                                         cgccagtgactttGTAAACAGATTAACACCTCGTCAAAATCCTGCTATTCTGCCCGTTGCGGTACTGGGCATTTACCCTACAAACTGCTGTCTCACAGGAGCGTGAAGAGAATCGCCTGCCGCACTATGACCATGAGAGCGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAACTGAGCTTGCCGCTGAGGGGATTGCGCAAAAACCCCTGGATGCAAACCACATGGCCGAACATGAAGGGCTGCGGAAAAACCCGACCGCGTGCgc                                       >  2:252568/11‑274 (MQ=255)                                                                                                                                                                                                             tGCTTTTTTGTAAACAGATTAACACCTCGTCAAAATCCTGCTATTCTGCCCGTTGCGGTACTGGGCATTTACCCTACAAACTGCTGTCTCACAGGAGCGTGAAGAGAATCGCCTGc                                                                                                                                                                                                  >  1:320472/1‑116 (MQ=255)                                                                                                                                                                                                              tcTTTTTTGTAAACAGATTAACACCTCGTCAAAATCCTGCTATTCTGCCCGTTGCGGTACTGGGCAGTTACCCTACAAACTGCTGTCTCACAGGAGCGTGAAGAGAATCGCCTGCCGCACTATGGCAATGAGAGCGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAATCCCGCCCGCGGGCgaagaa                                   <  1:590550/273‑1 (MQ=255)                                                                                                                                                                                                               cTTTTTTGTAAACCGATTAACACCTCGTCAAAATCCTGCTATTc                                                                                                                                                                                                                                                                        >  2:200042/1‑44 (MQ=255)                                                                                                                                                                                                                 tttttGTAAACAGATTAACACCTCGTCAAAATCCTGCTATTCTGCCCGTTGCGGTACTGGGCATTTACCCTACAAACTGCTGTCTCACAGGAGCGTGAAGAGAATCGCCTGCCGCa                                                                                                                                                                                              <  2:320466/116‑1 (MQ=255)                                                                                                                                                                                                                 tttttGTAAACAGATTAACACCTCGTCAAAAGCTGGCTTTGCGGCCCTGTGCGGGTATTGGCGTTTACCCTACAAACAGCTGGTTCAGAGGAACGTGAAGAGACTCGCCGGGCGCACTATGAGAATGAGAGCGAGGATAACCGACGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCGGGATGTAAACCAAATGGCCGCACTTGTAGAGGTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAAt                               <  2:692298/275‑1 (MQ=255)                                                                                                                                                                                                                   tttGTAAACAGATTAACACCTCGTCAAAATCCTGCTATTCTGcc                                                                                                                                                                                                                                                                    <  1:200045/44‑1 (MQ=255)                                                                                                                                                                                                                                   cacCTCGTCAAAATCCTGCTATTCTGCCCGTTGCGGTACTGGGCATTTACCCTACAAACTGCTGTCTCACAGGAGCGTGAAGAGAATCGCCTGCCGCACTATGACAATGAGAGCGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGCTCTGCTGAAAAAACCGCCCGCGGGCGATGAAGAATTCCTTTTTGCTCTGtcca             >  2:45130/1‑272 (MQ=255)                                                                                                                                                                                                                                      cTCGTCAAAATCCTGCTATTCTGCCCGTTGCGGTACTGGGc                                                                                                                                                                                                                                                    >  1:613413/1‑41 (MQ=255)                                                                                                                                                                                                                                      cTCGTCAAAATCCTGCTATTCTGCCCGTTGCGGTACTGGGCATTTACCCTACAAACTGCTGTCTCACAGGAGCGTGAAGAGAATCGCCTGCCGCACTATGACAATGAGAGCGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATCCACGTTAGATCTGTTaacca          >  2:222867/1‑275 (MQ=255)                                                                                                                                                                                                                                        cGTCAAAATCCTGCTATTCTGCCCGTTGCGGTACTGGGCATTTACCCTACAAACTGCTGTCTCACAGGAGCGTGAAGAGAATCGCCTGc                                                                                                                                                                                                  >  2:475737/1‑89 (MQ=255)                                                                                                                                                                                                                                        cGTCAAAATCCTGCTATTCTGCCCGTTGCGGTACTGGGCATTTACCCTACAAACTGCTGTCTCACAGGAGCGTGAAGAGAATCGCCTGCCGCa                                                                                                                                                                                              >  1:374508/1‑93 (MQ=255)                                                                                                                                                                                                                                        cGTCAAAATCCTGCTATTCTGCCCGTTGCGGTACTGGGCATTTACCCTACAAACTGCTGTCTCACAGGAGCGTGAAGAGAATCGCCTGCCGCACTATGACAATGAGAGCGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGCCCGCACTTGTAGAGCTGCTGAACAACCCGCCCGCGGGCAAAAAAGACTTCCTTTTAGactctttaa             >  2:359793/1‑262 (MQ=255)                                                                                                                                                                                                                                        cGTCAAAATCCTGCTATTCTGCCCGGTGCGGTACTGGCCATTTACCCTACAAACTGCTGTCTCACATGAGCGTGCAGAGAATCGCCTGCCGCACTATGACAATGAGAGCGAGGAGAACCGTCTTGCTAGAAGAATACCGGAAGCATGTAGCTNAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCACATGACCGCACTTGTAGAGCTGCTGAAAAAAGCGCCCGCGGGCGAAGAAGAATTACTGTTAAATCTGTTaaccaac        >  1:618267/1‑275 (MQ=255)                                                                                                                                                                                                                                          tcaaaatCCTGCTATTCTGCCCGTTGCGGTACTGGGCAttt                                                                                                                                                                                                                                                <  2:613404‑M2/34‑1 (MQ=255)                                                                                                                                                                                                                                          tcaaaatCCTGCTATTCTGCCCGTTGCGGTACTGGGCATTTACCCTACAAACTGCTGTCTCACAGGAGCGTGAAGAGAATCGCCTGCCGCACTATGACAATGAGAGAGAGGAGAACCGTCGTGCTAGAAGAATAcc                                                                                                                                                 >  1:433808‑M2/8‑136 (MQ=255)                                                                                                                                                                                                                                            aaaatCCTGCTATTCTGCCCGTTGCGGTACTGGGCATTTACCCTACAAACTGCTGTCTCACAGGAGCGTGAAGAGAATCGCCTGCCGCa                                                                                                                                                                                              <  1:475744‑M2/84‑1 (MQ=255)                                                                                                                                                                                                                                            aaaatCCTGCTATTCTGCCCGTTGCGGTACTGGGCATTTACCCTACAAACTGCTGTCTCACAGGAGCGTGAAGAGAATCGCCTGCCGCACTAt                                                                                                                                                                                          <  2:374502‑M2/88‑1 (MQ=255)                                                                                                                                                                                                                                              aatCCTGCTATTCTGCCCGTTGCGGTACTGGGCATTTACCCTACAAACTGCTGTCTCACAGGAGCGTGAAGAGAATCGCCTGCCGCACTATGACAATGAGAGCGAGGAGAACCGTCGTGCTAGAAGAATACCTTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGAACTTGTAGACATGCTGAAAAACCCGCCCGCGGGCGACGAAGAATTCCTGTTAGATCTGTTAACAAACCGTGtt  >  1:287981‑M2/4‑275 (MQ=255)                                                                                                                                                                                                                                              aatCCTGCTATTCTGCCCGTTGCGGTACTGGGCATTTACCCTACAAACTGCTGTCTCACAGGAGCGTGAAGAGAATCGCCTGCCGCACTATGACAATGAGAGCGAGGAGAACCGTCGTGCTAGAAGAATACCGTaa                                                                                                                                             <  2:433801‑M2/133‑1 (MQ=255)                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                                                ATTCGGATCTCAAGGAAATCGCAATGGTCGGCGAACTGCCACCCGCAGGTGCTGTGAATCCGAGTATAAAGAGGCGGTAGTTTAAATTTTGACTAATCTTGGGATTCGTTGAGAAAGGTGATTATCACCATGCGAATTAACGAAGTTTTTACGGAGGGAAACAATCTCTAGACCATCCTTAACGATTCAGCCACTTTTTTATGTTGCTTTTTTGTAAACAGATTAACACCTCGTCAAAATCCTGCTATTCTGCCCGTTGCGGTACTGGGCATTTACCCTACAAACTGCTGTCTCACAGGAGCGTGAAGAGAATCGCCTGCCGCACTATGACAATGAGAGCGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTT  >  CP009273/127749‑128260

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.