New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 239496	33 (0.860)	20 (0.540)	10/300	NT	31.1%	coding (295/2445 nt)	fadE	acyl coenzyme A dehydrogenase
	?	CP009273	= 239679	57 (1.550)					coding (112/2445 nt)	fadE	acyl coenzyme A dehydrogenase

CTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGTGCCCGCATCAATCGCTTCTTTCTCAGTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCGAGAATACTCAAAATCATCATAACGAAAAGCCCCTTACTTGTAGGAGGTCTGACCACTTGTGATGATATGGTTGTAGTGGATGTAAAAACATTTAGCAATATGTTTACAATATAATTACAACAAAGCTCACATTGTTGCTGTTTTTATCCGCACTTCAGGTC  >  CP009273/239458‑239931                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                             cTTTTTCCAGTCCGGGTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGTGCCCGCATCAATCGCTTCTTTCTCAGTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCAcgc                                                                                                                                                                                                         <  1:204159/275‑1 (MQ=255) cTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGTGCCCGCATCAATCGCTTCTTTCTCAGTGCGCGACATCGGCGGCATCACCTTACGTAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCAAAGGCGCAAAGTNAACTGGCACGAGGGTAATGGCCAGAGGAACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAACAAAATCAGACTGCTGCTAAATAAGCTCAcgc                                                                                                                                                                                                         >  1:645783/1‑275 (MQ=255)   ttttCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGTGCCCGCATCAATCGCTTCTTTCTCAGTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCACAGTTAAATGGCACGAGGATAATGGCCAGAGGCCCCAGTACCCACCACGACCAAAGCCCAGCAACGACGAGGGCGGCTGTCCAGGCGAGCAAAACCAGACGGCTGACAAACAAGACCAcgcg                                                                                                                                                                                                        >  2:284740/1‑274 (MQ=255)                               gTCGCCCTCCCACCAGGTGGTGCCCGCATCAATCGCTTCTTTCTCAGTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGTGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCNGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCGGATAAATAAGCTCACGCGGTGATAGAACAACGCGCAGAACAGGACa                                                                                                                                                                            >  1:522064/1‑274 (MQ=255)                                   cccTCCCACCAGGTTGTGCCCGCCTCAATCGCTTCTTTCTCAGTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGTGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGt                                                                                                                                                                       <  1:242049/275‑1 (MQ=255)                                           ccagtgtgtccccGCATTATTCTGTTCTTTCTCAGTGCGCGCAATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGTAATCATCGACCTACGCCTAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCAAAGACCAGCAACGCCGAGGGCGGATGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCGAGaa                                                                                                                                                               <  1:354467/265‑1 (MQ=255)                                                tggtgCCCGCATCAATCGCTTCTTTCTCAGTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCgagggcgacttgttccagggcaagccggactggaaaaagctgcataaacaaccgcagccgcgccggaccgccgaagcgaaagaggttcccgagcgcccg                                                                                                                                                           <  2:643923‑M2/274‑100 (MQ=255)                                                  gtgCCCGCATCAATCGCTTCTTTCTCAGTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATTGGCGCAAAGTTAAATGTCACGAGGATAATTGCCAGAGGCACCAGGTCCCACTCCGACCACAGAACAGCAACGCCGAGCGCGGCTGTCCAGGCCAGCAAAATCAGACTGCTGATAAACAAGCTCACGCGGCGATAGAACAACGCGCGGAGCAGGATAACCGGAGTTAGAATatccaa                                                                                                                                                        >  2:134219/1‑270 (MQ=255)                                                  gtgCCCGCATCAATCGCTTCTTTCTCAGTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCCACGCCgagggcgacttgttccagggcaagccggactggaaaaagatccataactacccgcagccgcgcctcaccgcccaagcgcaagcgtttctcgccggcccgg                                                                                                                                                          <  2:649455‑M2/273‑101 (MQ=255)                                                  gtgCCCGCATCAATCGCTTCTTTCTCAGTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCgagggcgacttgttccagggcaagccggactggaaaaagctgcataactatccgcagccgcgcctgaccgccgaagagcaaccgtttctcgacggcccggta                                                                                                                                                        <  1:246553‑M2/275‑103 (MQ=255)                                                  gtgCCCGCATCAATCGCTTCTTTCTCAGTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCAcgcg                                                                                                                                                                                                        >  2:633413/1‑227 (MQ=255)                                                  gtgCCCGCATCAATCGCTTCTTTCTCAGTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGGACCCACGCCGCCCACAAACCAGCAACGCCGAGGGCTGCTGTCCCAGCGAGCAAAACTCGACTGCTGATAAATAAGCCCACGCGGTGATAGCACAACGCGCCCAGCAGGACAACCGTAGCgagacgaaccaa                                                                                                                                                        >  2:3347/1‑267 (MQ=255)                                                      ccGCATCAATCGCTTCTTTCTCAGTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGTAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGa                                                                                                                                                                                                    <  1:633422/227‑1 (MQ=255)                                                                   ttctttctCAGTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCGAGAATACTCAAAATCATCATAACGaaa                                                                                                                                        <  1:157481/274‑1 (MQ=255)                                                                    tctttctCAGTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAAt                                                                                                                                                                                                                                   >  1:693918/1‑182 (MQ=255)                                                                        tctcAGTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGa                                                                                                                                                                                                                               <  2:693909/182‑1 (MQ=255)                                                                         ctcAGTGCGCGACCTCGGCGGAATCACCTGACGGAAACCGCGATAGACCGGCGCGGAAATCATCGACTTACGCATAGGAGCAAAGTTAAATNGCACAAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCGAGAATACTCAAAATCATCATAACGAAAAGCCCCt                                                                                                                                 <  1:514207/275‑1 (MQ=255)                                                                             gTGCGCGACATCGGCGGCATCACCTTAAGGAAACCGCGAAAGACAGGCGCGGAAATCATCGACTTACGCATAGGCGCAATGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCGAGAATACTCAAAATCATCATAACGAAAAGCCCCTTACt                                                                                                                             <  1:719987/275‑1 (MQ=255)                                                                                     cacaagcggaaacacCAAACGGAAAAACCGCAATACCGGCGAGGAAATACACGACTGACGAACAGGCGCAAAGTAAAATGGCACGAGGATAAGGGCAAGAGGACCCAGTACCCACGCCGACCACAGACCAGCAACGCCgagggcgacttgttccagggcaagccggactggaaaaagctgcataactatccgcagccgcgcctgaccgccgaagagcaagcgtttctcgacggcccggtagaagaagcctgccggatggcgaatgatttccagat                                                                                                                     >  2:246548‑M2/6‑138 (MQ=255)                                                                                        cggcggCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAg                                                                                                                                                                                                                >  1:242302/1‑181 (MQ=255)                                                                                            ggcATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCa                                                                                                                                                                                                            <  2:242297/181‑1 (MQ=255)                                                                                             gcagcaCCCGACTGAAACCCAGCAATACCGGCGCGCAAATCATCGACGTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCGAGAATACTCAAAATCATCATAACGAAAAGCCCCTTACTTGTAGGAGGTCTGAc                                                                                                              <  2:15715/274‑1 (MQ=255)                                                                                                     tgagggAAACCGGAAAGTACAGGCGGGCAAAGAAGCGACCTACCCATAGAGGCAAAGTGAAAAGGCAGGAGTAGTAGGGGCAGAGGCGCCAGTACCCACCCCGACACCAGACCAGAAACGCAGAGGGCGCATGGCAAGGCGAGCAAAATCAGACGGCTGAAAAATAAGATCAGTCGGTGAGAGAACAAGGAGCCGAGCCGGACAACCGTAGCGAGAATACTCAAGATCATCATAACGAAAAGCCCCTTACTAGAAGGAGGTCTGACGCCTGGtga                                                                                                     <  2:159962/271‑1 (MQ=255)                                                                                                          gAATCCGCGAAATACCGGCGCGGAAATCATTGACTTCCGGATACGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCGAGAATACTCAAAATCATCATAACGAAAAGCCCCTTACTTGTAGGAGGTCTGACCACTTGTGATGata                                                                                                <  1:134220/275‑1 (MQ=255)                                                                                                           aaaCCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCCTAGGTAGAATACTCAAAATCATCATAACGAAAAACACCATAAATGTCGGAGGATTGAACACTTGTGATTatat                                                                                               >  2:241449/1‑275 (MQ=255)                                                                                                             aCCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCgagggcgtcttgttccagggcaagccggactggaaaaagctgcataactatccgcagccgcgcctgaccgccgaagagcaagcgtttctcgacggcccggtagaagaagcctgccggatggcgaatgatttccagaacacccataagctggcggcactgcc                                                                                             <  1:400304‑M2/275‑162 (MQ=255)                                                                                                             aCCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCgagggcgacttgttccagggcaagccggactggaaaaagctgcataactatccgcagccgcgcctgaccgccgaagagcaagcgtttttcgacggcccggtagaagaagcctgcgggatggcgaatggtttacagatcaaccataacctggcggatctgcc                                                                                             <  1:221181‑M2/275‑162 (MQ=255)                                                                                                             aCCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCgagggcgacttgttccagggcaagccggactggaaaaagctgcataactatccgcagccgcgcctgaccgccgaagagcaagcgtttctcgacggcccggtagaagaagcctgccggatggcgaatgatttccagatcacccatgagctggcggatctgcc                                                                                             <  1:153325‑M2/275‑162 (MQ=255)                                                                                                             aCCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCgagggcgacttgttccagggcaagccggactggaaaaagctgcataactatccgcagccgcgcctgaccgccgaagagcaagcgtttctcgacggcccggtagaagaagcctgccggatggcgaatgatt                                                                                                                            <  1:568002‑M2/244‑131 (MQ=255)                                                                                                             aCCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCgagggcgacttgttcc                                                                                                                                                                                                                                              <  2:368658‑M2/130‑17 (MQ=255)                                                                                                             aCCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAAGCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGc                                                                                                                                                                                  >  1:705846/1‑190 (MQ=255)                                                                                                              ccGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCGCGCCGACCACAGACCAGCAACGCCgagggcgacttgttccagggcaagccggactggaaaaagctgcataact                                                                                                                                                                                                             <  1:305680‑M2/162‑50 (MQ=255)                                                                                                              ccGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCgagggcgacttgttccagggcaagccggactggaaaaagctgcataactatccgcagccgcgcctgaccgncgaagagcaagcgtttctcgacggcccggtagaagaagcctgccggatggcgaatgatttccagatcacccatgagctggcggatctgccg                                                                                            <  1:504503‑M2/275‑163 (MQ=255)                                                                                                              ccGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCgagggcgacttgttccagggcaagccggactggaaaaagctgcataactatccgcagccgcgcctgaccgncgaagagcaagcgtttctcgacggcccggtagaagaagcctgccggatggcgaatgatgtcaaaatcacccaagaactggcggatctgccg                                                                                            <  1:520163‑M2/275‑163 (MQ=255)                                                                                                              ccGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCgagggcgacttgttccagggcaagc                                                                                                                                                                                                                                     <  2:548905‑M2/138‑26 (MQ=255)                                                                                                               cgcgAAATACCGGCGCGGAAATCATCGACGTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCGAGAATACTCAAAATCATCATAACGAAAAGCCCCTTACTTGTAGGAGGTCTGACCACTTGtga                                                                                                     <  1:241454/265‑1 (MQ=255)                                                                                                                gcgAGAGACCGCCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAGCGCCgagggcgacttgttccagggcaagccggactggaaaaagctgcataactatccgcagccgcgcctgaccgccgaagagcaagcgtttctcgacggcccggtagaagaagcctgccggatggcgaatgatttccagatcacccatgagctggcggatctgccgcc                                                                                          >  2:153322‑M2/1‑111 (MQ=255)                                                                                                                gcgAAAGACCGGCGCGGAAAGCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCgagggcgacttgttccagggcaagccggactggaaaaagctgcataactatccgcagccgcgcctgaccgccgaagagcaagcgtttctcgacggcccggtagaagaagcctgccggatggcgaatgatttccagatcacccatgagctggcggatctgccgcc                                                                                          >  1:454464‑M2/1‑111 (MQ=255)                                                                                                                 cgAAATACCGGCGCGGGAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGa                                                                                                                                                                              <  2:705836/190‑1 (MQ=255)                                                                                                                 cgAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCgagggcgacttgttccaggg                                                                                                                                                                                                                                          >  1:368664‑M2/1‑110 (MQ=255)                                                                                                                 cgAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAAcgc                                                                                                                                                                                         >  1:403894/1‑179 (MQ=255)                                                                                                                 cgAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCGAGAATACTCAAAATCATCATAACGAAAAGCCCCt                                                                                                                                 <  1:575076/235‑1 (MQ=255)                                                                                                                 cgAAATACCGGCGCGGAAAGCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGGGGATANTGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCgagggcgacttgttccagggcaagccggactggaaaaagctgcataactatccgcagccgcgcctgaccgccgaagagcaagcgtttctcgacggcccggtagaagaaacctgccggatgtcgaatgatttccagat                                                                                                                     >  1:534679‑M2/1‑110 (MQ=255)                                                                                                                  gAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCGCGCCGACCACAGACCAGCAACGCCgagggcgacttgttccagggcaagccggactggaaaaagctgcataactatcc                                                                                                                                                                                                         >  2:305674‑M2/1‑109 (MQ=255)                                                                                                                  gAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCgagggcgacttgttccagggcaagccgga                                                                                                                                                                                                                                 >  1:548914‑M2/1‑109 (MQ=255)                                                                                                                     aTACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCg                                                                                                                                                                                     <  2:403887/179‑1 (MQ=255)                                                                                                                        cgacgcaggAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAACAGGACAACCGTAGc                                                                                                                                                                    >  1:376286/8‑193 (MQ=255)                                                                                                                                gAAATCATCGACTTACGCATAGGCGCAAAGTTAAAGGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCGAGAATACTCAAAATCATCATAACGAAAAGCCCCTTACTTGTAGGAGGTCTGACCACTtg                                                                                                        <  1:253503/245‑1 (MQ=255)                                                                                                                                     catcGGCATACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAAGCACCAGTACCCACGCCGACCACAGACCAGCAAAGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCGCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCGAGAAGACTCAAAATCATCATAACGAATAGCCCCTTACTTGTAGGAGGTCTGACCACTTGTGATGATATGGTTGTAGTGGATGTAAAAACATTTa                                                                     <  1:430163/275‑1 (MQ=255)                                                                                                                                             taaggaTAGGCGCAAAGTGAAAGGGCAAGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGAGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCGAGAATACTCAAAATCATCATAACGAAAAGCCCCTTACTTGTAGGAGGTCTGACCACTTGTGATGATATGGTTGTAGTGGATGTAAAAACATTTAGCAatat                                                              <  1:3347/269‑1 (MQ=255)                                                                                                                                                      gcgcAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAAcc                                                                                                                                                                         >  2:316009/1‑158 (MQ=255)                                                                                                                                                          aaaGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAg                                                                                                                                                                     <  1:316015/158‑1 (MQ=255)                                                                                                                                                                      cACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAg                                                                                                                                                                                                                >  2:451784/1‑103 (MQ=255)                                                                                                                                                                      cACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGt                                                                                                                                                                                                      >  1:528986/1‑113 (MQ=255)                                                                                                                                                                        cGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCATCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCGAGAATACTCAAAATCATCATAACGAAAAGCCCCTTACTTGTAGGAGGTCAGACCACTTGTgatgat                                                                                                 >  1:672714/1‑212 (MQ=255)                                                                                                                                                                          aGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCa                                                                                                                                                                                                            <  1:451791/103‑1 (MQ=255)                                                                                                                                                                          aGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATa                                                                                                                                                                                                  <  2:528978/113‑1 (MQ=255)                                                                                                                                                                          aGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCGAGAATACTCAAAATCATCATAACGAAAAGCCCCTTACTTGTAGGAGGTCTGACCACTTGTGATGATATGGTTGTAGTGGATGTAAAAACATTTAGCAATATGTTTACAATATAATTACAACAAAGCTcaca                                <  1:16562/275‑1 (MQ=255)                                                                                                                                                                                     cAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAgg                                                                                                                                                                                                                                             >  2:8942/1‑59 (MQ=255)                                                                                                                                                                                      agagGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCGAGAATACTCAAAATCATCATAACGAAAAGCCCCTTACTTGTAGGAGGTCTGACCACTTGTGATGATATGGTTGTAGTGGATGTAAAAACATTTAGCAATATg                                                             >  1:523583/1‑234 (MQ=255)                                                                                                                                                                                         ggCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAg                                                                                                                                                                                                                                         <  1:8942/59‑1 (MQ=255)                                                                                                                                                                                          gCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCGAGAATACTCAAAATCATCATAACGAAAAGCCCCTTACTTGTAGGAGGTCTGACCACTTGTGATGATATGGTTGTAGTGGATGTAAAAACATTTAGCAATATGTTTa                                                         <  2:523576/234‑1 (MQ=255)                                                                                                                                                                                             ccAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGc                                                                                                                                                                    >  1:175241/1‑124 (MQ=255)                                                                                                                                                                                             ccAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCGAGAATACTCa                                                                                                                                                         >  1:95410/1‑135 (MQ=255)                                                                                                                                                                                                 tACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCgaga                                                                                                                                                                <  2:175238/124‑1 (MQ=255)                                                                                                                                                                                                 tACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCGAGAATACTCAAAat                                                                                                                                                     <  2:95409/135‑1 (MQ=255)                                                                                                                                                                                                  aCCCACGCCGACCACAGACCAGCAACGCCgagggcgacttgttccagggcaagccggactggaaaaagctgcataactatccgcagccgcgcctgaccgccgaagagcaagcgtttctcgacggcccagtagaagaagcctgccggatggcgaatgatttccagatcacccatgagctggcggatctgccgccggagttgtgggcgtaccttaaagagcatcgtttcttcgcgatgatcatcaaaaaagagtacggcgggctggagttctcggc         >  1:643932‑M2/1‑29 (MQ=255)                                                                                                                                                                                                   cccACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCGAGAATACTCAAAATCATCATAACGAAAAGCCCCTTACTTGTAGGAGGTCTGACCACTTGTGATGATATGGTTGTAGTGGATGTAAAAACATTTAg                                                                    >  1:280486/1‑214 (MQ=255)                                                                                                                                                                                                        gCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAACTCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCGAGAATACTCAAAATCATCATAACGCACAGCCCCTTACTTGTAGGAGGTCTGACCACTTCTTACGCTCTGGCTGTATTGAATCTCAAACCAATTATCAATATTTTTACACTATAATTACAACAAAGCTCCCACTGTTGCTGTTTTTATGCCCACTTCAGGTc  >  2:645394/1‑275 (MQ=255)                                                                                                                                                                                                           gACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCGAGAATACTCAAAATCATCATaa                                                                                                                                             >  1:253756/1‑133 (MQ=255)                                                                                                                                                                                                            aCCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCGAGAATACTCAAAATCATCATAACGAAAAGCCCCTTACTTGTAGGAGGTCTGACCACTTGtgat                                                                                                    >  1:320299/1‑173 (MQ=255)                                                                                                                                                                                                               acaGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCGAGAATACTCAAAATCATCATAACGaa                                                                                                                                         <  2:253751/133‑1 (MQ=255)                                                                                                                                                                                                                caGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAAGAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCGAGAATACTCAAAATCATCATAACGAAAAGCCCCTTACTTGTAGGAGGTCTGACCACTTGTGATGata                                                                                                <  2:320293/173‑1 (MQ=255)                                                                                                                                                                                                                  gACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCGAGAATACTCAAAATCATCATAACGAAAAGCCCCTTACTTGTAGGAGGTc                                                                                                                  >  2:512161/1‑153 (MQ=255)                                                                                                                                                                                                                      aGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAAt                                                                                                                                                                                                                                   >  1:268618/1‑36 (MQ=255)                                                                                                                                                                                                                      aGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCGAGAATACTCAAAATCATCATAACGAAAAGCCACTTACTTGTAGGAGGTCTGAc                                                                                                              <  1:512168/153‑1 (MQ=255)                                                                                                                                                                                                                        cAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCCCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCGAGAATACTCa                                                                                                                                                         >  2:597122/1‑108 (MQ=255)                                                                                                                                                                                                                          aCGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGa                                                                                                                                                                                                                               <  2:268613/36‑1 (MQ=255)                                                                                                                                                                                                                            gCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCGAGAATACTCAAAat                                                                                                                                                     <  1:597131/108‑1 (MQ=255)                                                                                                                                                                                                                             ccGAGGGCGACTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCGAGAATACTCAAAATCATCATAACGAAAAGCCCCTTACTTGTAGGAGGTCTGACCACTTGTGATGATATGGTTGTAGTGGATGTAAAAACATTTAGCAATATGTTTACAATATAATTaca                                            >  1:241068/1‑212 (MQ=255)                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                             CTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGTGCCCGCATCAATCGCTTCTTTCTCAGTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGAACAACGCGCCGAGCAGGACAACCGTAGCGAGAATACTCAAAATCATCATAACGAAAAGCCCCTTACTTGTAGGAGGTCTGACCACTTGTGATGATATGGTTGTAGTGGATGTAAAAACATTTAGCAATATGTTTACAATATAATTACAACAAAGCTCACATTGTTGCTGTTTTTATCCGCACTTCAGGTC  >  CP009273/239458‑239931

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.