New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | CP009273 | = 486367 | 27 (0.700) | 5 (0.140) | 4/298 | NT | 15.0% | coding (30/378 nt) | ybaN | DUF454 family inner membrane protein |
? | CP009273 | = 487543 | 31 (0.850) | intergenic (+124/‑5) | apt/dnaX | adenine phosphoribosyltransferase/DNA polymerase III/DNA elongation factor III, tau and gamma subunits |
AGCGACCGTTAAACTGATCCGTCGTCTGGGTGGTGAAGTGGCTGACGCTGCGTTCATTATCAACCTGTTCGATCTCGGCGGCGAACAGCGTCTCGAAAAACAGGGCATTACCAGCTACAGCCTTGTCCCGTTCCCGGGCCATTAATTATCGCCAGTCTTGTGCTGCCCACGCTACGGACAGCACAAGATGTGCATTCAGCCTCGCCGTTCTGACGGGGCTGTGTTAGCATTACCCCTTCGTGAATCCACCTTCCAGCGTTTCAGAGCCTGCCAATGAGTTATCAGGTCTTAGCCCGAAAATGGCGCCCACAAACCTTTGCTGACGTCGTCGGCCAGGAACATGTGCTGACCGCACTGGCGAACGGCTTGTCGTTAGGGCGTATTCATCATGCTTATCTTTTTTCCGGCACCCGTGGCGTCGGAAAAACCTCTATCGCCCGACTGCTGGCGAAGGGGCTAAACTGCGAAACCGGCATTACCGCGACGCCGTGCGGCGTGTGCGATAACTGTCGTGAAATCGAGCAGGGGCGCTTTGTCGAT > CP009273/487275‑487814 | aGCGACCGTTAAACGTATCCGTCGTCTGGGTGGTGAAGTGGCTGACGCTGCGTTCATTATCAACCTGTTCGATCTCGGCGGCGAACAGCGTCTCGAAAAACAGGGCATTACCAGCTACAGCCTTGTCCCGTTCCCGGGCCATTAATTATCGCCAGTCTTGTGCTGCCCACGCTACGGACAGCACAAGATGTGCATTCAGCCTCGCCGTTCTGACGGGGCTGTGTTAGCATTACCCCTTCGTGAATCCACCTTCCAGCGTTTCAGAGCCTgccaat > 1:178339‑M2/1‑269 (MQ=255) aCTGATCCGTCGTCTGGGTGGTGAAGTGGCTGACGCTGCGTTCATTATCAACCTGTTCGATCTCGGCGGCGAACAGCGTCTCGAAAAACAGNGCATTACCAGCTACAGCCTTGTCCCGTTCCCGGGCCATTAATTATCGCCAGTCTTGTGCTGCCCACGCTACGGACAGCACAAGATGTGCATTCAGCCTCGCCGTTCTGACGGGGCTGTGTTAGCATTACCCCTTCGTGAATCCACCTTCCAGCGTTTCAGAGCCTGCCAATGAGTTATCAGGt < 1:549103/275‑1 (MQ=255) ggtggtGAAGTGGCTGACGCTGCGTTCATTATCAACCTGTTCGATCTCGGCGGCGAACAGCGTCTCGAAAAACAGGGCATTACCAGCTACAGCCTTGTCCCGTTCCCGGGCCATTAATTATCGCCAGTCTTGTGCTGCCCACGCTACGGACAGCACAAGAGGTGCATTCAGCCTCGCCGTTCTGACGGGGCTGTGTTATCATTACCCCTTCGTTATTCCACCTTCCAGCGTTTCATAGCCTGCCCACTCGTTATCAGGTCTAAGCCCGAAAAta > 1:235185/1‑273 (MQ=255) caatagcAGGGCATTTCCAGCTCCAGCCTTGTCCCGTTCCCGGGCCATTAATTATCGCCAGTCGTGTGCTGCCCACGCTACGGACAGCACAAGATGTGCATTCAGCCTCGCCGTTCTGACGGNGCTGTGTTAGCAATACCCCTTCGTGAATCCACCTTCCAGCGTTTCAGAGCCTGCCAATGAGTTATCAGGTCTGAGCCCGAAAATGGCGCCCACAAACCTTTGCTGACGTCGTCGGCCAGGAACATGTGCTGACCGCACTGGCGAACGGCTTg < 1:603644/269‑1 (MQ=255) cttACCAGCTACAGCCTTGTCCCGTTCCCGGGCCATTAATTATCGCCAGTCTTGTGCTGCCCACGCTACGGACAGCACAAGATGTGCATTCAGCCTCGCCGTTCTGACGGGGCTGTNTTAGCATTACTCCTTCGTGAATCCACCTTCCAGCGTTTCAGAGCCTGCCAATGAGTTATCAGGTCTTAGCCCGAAAATGGCGCCCACAAACCTTTGCTGACGTCGTCGGCCAGGAACATGTGCTGACCGCACTGGCGAACGGCTTGTCGTTAGGGCGt < 1:649356/274‑1 (MQ=255) gCTACAGCCTTGTCCCGTTCCCGGGCCATTAATTATCGCCAGTCTTGTGCTGCCCACGCTACGGACAGCACAAGATGTGCATTCAGCCTCGCCGTTCTGACGGGGCTGTGTTAGCATTACCCCTTCGTGAATCCACCTTCCAGCGTTTCAGAGCCTgccaatgatgattaaaatgattcgttgcatattgagtgttgtcagcttacagagtggctactttagcataacaatta < 1:190696‑M2/233‑78 (MQ=255) tACAGCCTTGTCCCGTTCCCGGGACATTGATTATCGCCAGTCTTGTGCTGCCCACGCTACGGACAGCACAAGATGTGCATTCAGCCTCGCCGTTCTGACGGGGCTGTGTTAGCATTACCCCTTCGTGAATCCACCTTCCAGCGTTTCAGAGCCTgccaatgatgattaaaatgattcgttgcanattgagtgttgtcagcttacagagtggcgactttagcataacaatta < 1:507147‑M2/231‑78 (MQ=255) cAGCCTTGTCCCGTTCCCGGGCCATTAATTATCGCCAGTCTTGTGCTGCCCACGCTACGGACAGCACAAGATGTGCATTCAGCCTCGCCGTTCTGACGGGGCTGTGTTAGCATTACCCCTTCGTGAATCCACCTTCCAGCGTTTCAGAGCCTgccaatgatgattaaaatgattcgttgcatattgagtgttgtcagcttacagagtggctactttagcataacaattatcat > 2:190693‑M2/1‑152 (MQ=255) ttCCCGGGCCATTAATTATCGCCAGTCTTGTGCTGCCCACGCTACGGACAGCACAAGATGTGCATTCAGCCTCGCCGTTCTGACGGGGCTGTGTTAGCATTACCCCTTCGTGAATCCACCTTCCAGCGTTTCAGAGCCTGCCAATGAGt > 2:51934/1‑149 (MQ=255) cGGGCCATTAATTATCGCCAGTCTTGTGCTGCCCACGCTACGGACAGCACAAGATGTGCATTCAGCCTCGCCGTTCTGACGGGGCTGTGTTAGCATTACCCCTTCGTGAATCCACCTTCCAGCGTTTCAGAGCCTGCCAATGAGTTATc < 1:51934/149‑1 (MQ=255) cGGGCCATTAATTATCGCCAGTCTTGTGCTGCCCACGCTACGGACAGCACAAGATGTGCATTCAGCCTCGCCGTTCTGACGGGGCTGTGTTAGCATTACCCCTTCGTGAATCCACCTTCCAGCGTTTCAGAGCCTGCCAATGAGTTATCAGGTCTTAGCCCGAAAATGGCGCCCACAAACCTTTGCTGACGTCGTCGGCCAGGAACATGTGCTGACCGCACTGGCGa < 1:5178/227‑1 (MQ=255) aTCGCCAGTCTTGTACTGCCCACGCTACGGACAGCACAAGATGTGCATTCAGCCTCGCCGTTCTGACGGGGCTGTGTTAGCATTACCCCTTCGTGAATCCACCTTCCAGCGTTTCAGAGCCTGCCAATGAGTTATCAGGTCTTAGCCCGAAAATTGCG‑CCACAAACCTTTGCTGACGTCGTCGGCCAGGAACAAGTTCTGACCGCAAAGGCGAACGGCTTGTCGGTAGAGCGTATTCAACAAGGTTAGCTTTTTTCCTGCAcccttttcttttt > 2:588556/1‑264 (MQ=255) cccACGCTACGGACAGCACAAGATGTGCATTCAGCCTCGCCGTTCTGACGGGGCTGTGTTAGCATTTATCCTTCGGGAATCCACCTTCCAGCGTTTCAGAGCCTGCCAATGAGTTATCAGGTCTTAGCCCGAAAATGGCGCCCACAAACCTTTGCTgctg > 1:75011/1‑157 (MQ=255) ggACAGCACAAGATGTGCATGCAGCCTCGCCGTTCTGACGGGGCTGTGTTAGCATTACCCCTTCGTGAATCCACCTTCCAGCGTTTCAGAGCCTGCCAATGAGTTATCAGGTCTTAGCCCGAAAATGGCGCCCACAAACCTTTGCTGACGTCGTCGGCCAGGAACATGTGCTGACCGCACTGGCGAACGGCTTGTCGTTAGGGCGTACTCATCATGATTATCTTTTTTCCGCCACCCGTGGCGTCGGAAAAACCTCTATCGCCCGACTGCTGGc > 1:105055/1‑274 (MQ=255) gCATTCAGCCTCGCCGTTCTGACGGGGCTGTGTTAGCATTACCCCTTCGTGAATCCACCTTCCAGCGTTTCAGAGCCTGCCAATGAGTTATCCGGTCTTAGCCCGAAAATGGCGCCCACAAACCTTTGCTGACGTCGTCGGCCAGGAACATGTGCTGACCGCACTGGCGAACGGCTTGTCGTTAGGGCGTATTCATCATGCTTAGCTTTTTTCCGGCAACCTGGGCGTCGGAAAAACCACTATCGCCCGCCTGCTGGCGCAGGGGcgcaaccgc > 2:187504/1‑266 (MQ=255) ttCAGCCTCGCCGTTCTGACGGGGCTGTGTTAGCATTACCCCTTCGTGAATCCACCTTCCAGCGTTTCAGAGACTGCCAATGAGt > 2:722912/1‑85 (MQ=255) aGCCTCGCCGTTCTGACGGGGCTGTGTTAGCATTACCCCTTCGTGAATCCACCTTCCAGCGTTTCAGAGCCTGCCAATGAGTTATCAGGTCTTAGCCCGAAAATGGCGCCCACAAACCTTTGCTGACGTCGTCGGCCAGGAACATGTGCTGACCGCACTGGCGAACGGCTTGTCGTTAgg > 1:364509/1‑180 (MQ=255) aGCCTCGCCGTTCTGACGGGGCTGTGTTAGCATTACCCCTTCGTGAATCCACCTTCCAGCGTTTCAGAGCCTGCCAATGAGTTATCAGGTCTTAGCCCGAAAATGGCGCCCACAAACCTTTGCTGACGTCGTCGGCCAGGAACATGTGCTGACCGCACTGGCGAACGGCTTGTCGTTAGGGCGTATTCATCATGCTTATCTTTTTTCCGGCACCCGTGGCGTCGGAAAAACCTCTATCGCCCGACTGCTGGCGAAGGGGATAAACTGCGAAAcc > 1:49581/1‑274 (MQ=255) gCCTCGCCGTTCTGACGGGGCTGTGTTAGCATTACCCCTTCGTGAATCCACCTTCCAGCGTTTCAGAGCCTGCCAATGAGTTATc < 1:722922/85‑1 (MQ=255) tCGCCGTTCTGACGGGGCTGTGTTAGCATTACCCCTTCGTGAATCCACCTTCCAGCGTTTCAGAGCCTGCCAATGAGTTATCAGGTCTTAGCCCGAAAATGGCGCCCACAAACCTTTGCTGACGTCGTCGGCCAGGAACATGTGCTGACCGCACTGGCGAACGGCTTGTCGTTGGGGCGt < 2:364503/180‑1 (MQ=255) cGCCGTTCTGACGGGGCTGTGTTAGCATTACCCCTTCGTGAATCCACCTTCCAGCGTTTCAGAGCCTGCCAATGAGTTATCAGGTCTTAGCCCGAAAATGGCGCCCACAAACCTTTGCTGACGTCCTCTGCCAGGAACATGTGCTGACCGCACTGCCGAACGGCTTGTCGTCAGGGCGTATTCATCATGCTTATCTTTTTTCCGGCACCCTTCGCCTCGGAAAAACCTCTATCGCCCAACTCCTTGATAAGGGGCTACACTGCGAAACAGACAt > 1:202399/1‑274 (MQ=255) tgtgtgagggTTGTGTAAGCATTACCCCTGCGGGAATCCTCCTTCCAGCGTTTCAGAGCCTGCCAATGAGTTATCAGGTCTTAGCCCGAAAATGGCGCCCACAAACCTTTGCTGACGTCGTCGGCCAGGAACATGTGCTGACCGCACTGGCGAACGGCTTGTCGTTAGGGCGTATTCATCATGCTTATCTTTTTTCCGGCACCCGTGGCGTCGGAAAAACCTCTATCGCCCGACTGCTGGCGAAGGGGCTAAACTGCGAAACCGGCATTACcgcg < 2:49581/268‑1 (MQ=255) cTGACTGTGCTGGTTTATCAGTACCCCTTCGTGAATCCCCCTTCCAGCGTTTCAGTTCCTGTCAATGATTTATCATGTCTTAGCCCGAAAATTGCGCCCACATACTTTTGCTGACGTCGTTGGCCAGGAACATTTGCTGACCTCACTGGCTAACGGCTTGTCGTTAGGGCGTATTCATCATGCTTATCTTTTTTCCGGCACCCGTGGCGTCGGAAAAACCTCTAGCGCCCGACTGCTGGCGAAGGGGCTAAACTGCGAAACCGGCATTACcgcg < 2:235180/274‑1 (MQ=255) aCCCCTTCGTGAATCCACCTTCCAGCGTTTCAGAGCCTgccaatgatgattaaaatgattcgttgcatattgagtgttgtcagcttacagagtggctactttagcataacaatta < 1:709898‑M2/115‑78 (MQ=255) aCCCCTTCGTGAATCCACCTTCCAGCGTTTCAGAGCCTGCCAATGAGTTATCAGGTCTTAGCCCGAAAATGGCGCCCACAAACCTTTGCTGACGTCGTCGGcc > 1:355644/1‑103 (MQ=255) aCCCCTTCGTGAATCCACCTTCCAGCGTTTCAGAGCCTGCCAATGAGTTATCAGGTCTTAGCCCGAAAATGGCGCCCACAAACCTTTGCTGACGTCGTCGGCCAGGAACATGTGCTGACCGCACTGGCGAACGGCTTGTCGTTAGGGCGTAt > 1:259111/1‑152 (MQ=255) aCCCCTTCGTGAATCCACCTTCCAGCGTTTCAGAGCCTGCCAATGAGTTATCAGGTCTTAGCCCGAAAATGGCGCCCACAAACCTTTGCTGACGTCGTCGGCCAGGAACATGTGCTGACCGCACTGGCGAACGGCTTGTCGTTAGGGCGTATTCATCATGCTTATCTTTTTTCCGGCACCCGTGGCGTCGGAAAAACCCCTATCGCCCGACTGCTGGCGAAGGGGCGCAACTGCGAAACCGGCATTACCGCGACGCCGGGCGGGGGGTGCgctcg > 2:661268/1‑271 (MQ=255) cTTCGTGAATCCACCTTCCAGCGTTTCAGAGCCTgccaatgatgattaaaatgattcgttgcatattgagtgttgtcagcttacagagtggctactttagcataacaattatcat > 2:709888‑M2/1‑34 (MQ=255) cTTCGTGAATCCACCTTCCAGCGTTTCAGAGCCTGCCAATGAGTTATCAGGTCTTAGCCCGAAAATGGCGCCCACAAACCTTTGCTGACGTCGTCGGCCNGGAACATGTGTTGACCGCACTGGCGAACGGCTTGTCGTTAGGGCGTATTCATCATGCTTATCTTTTTTCCGGCACCCGTGGCGTCGGAAAAACCTCTATCGCCCGACTGCTGGCGAAGGGGCTAAACTGCGAAACCGGCATTACCGCGACGCCGTgcg < 1:661277/258‑1 (MQ=255) cTTCGTGAATCCACCTTCCAGCGTTTCAGAGCCTGCCAATGAGTTATCAGGTCTTAGCCCGAAAATGGCGCCCACAAACCTTTGCTGACGTCGTCGGCCAgca < 2:355638/103‑3 (MQ=255) cTTCGTGAATCCACCTTCCAGCGTTTCAGAGCCTGCCAATGAGTTATCAGGTCTTAGCCCGAAAATGGCGCCCACAAACCTTTGCTGACGTCGTCGGCCAGGAACATGTGCTGACCGCACTGGCGAACGGCTTGTCGTTAGGGCGTATtcat < 2:259106/152‑1 (MQ=255) tCGTGAATCCACCTTCCAGCGTTTCAGAGCCTGCCAATGAGTTATCAGGTCTTAGCCCGAAAATGGCGCCCACAAACCTTTGCTGACGTCGTCGGCCAGGAACATGTGCTGACCGCACTGGCGAACGGCTTGTCGTTAGGGCGTATTCATCATGCTTATCTTTTTTCCGGCACCCGTAGCGTCGGAAAAACCTCTATCGCCCGACTGCTGGCGAAGGGGCTAAACTGCGAAACCGGCATTACCGCGACGCCGTGCGGCGGGTGCGATAACTGTCg > 1:368686/1‑275 (MQ=255) cGTGAATCCACCTTCCAGCGTTTCAGAGCCTGCCAATGAGTTATCAGGTCTTAGCCCGAAAATGGCGCCCACAAACCTTTGCTGACGTCGTCGGCCAGGAACATGTGCTGACCGCACTGGCGAACGGCTTGTCGTTAGGGCGTATTCATCATGCTTATCTTTTTTCCGGCACCCGTGGCGTCGGAAAAACCTCTATCGCCCGACTGCTGGCGAAGGGGCTAAACTGCGAAACCGGCATTACCGCGACGCCGTGCGGCGTGTGCGATAACTGTCg < 1:187507/274‑1 (MQ=255) aaTCCACCTTCCAGCGTTTCAGAGCTTGCCTATGAGTTATCAGGTCTTAGCCCGAAAAGGGCGCCCACACACCTTTGCGGACGTCGTCGTCCAGGAACATGTGCGGACCGCACTGGCGAACGGCTTGTCGTTAGGGCGTATTCATCATGCTTATCTTTTTTCCGGCACCCGTGGCGTCGGAAAAACCTCTATCGCCCGCCTGCTGGCGAAGGGGCTAAACTGCGAAACCGGCATTACCGCGACGCCGTGCGGCGTGTGCGATAACTGTCGTGaaa < 1:199292/275‑1 (MQ=255) aaTCCACCTTCCAGCGTTTCAGAGCCTGCCAATGAGTTATCAGGTCTTAGCCCGAAAATGGCGCCCACAAACCTTTGCTGACGTCGTCGGCCAGGAACATGTGCTGACCGCACTGGCGAACGGCTTGTCGTTAggg > 2:208515/1‑136 (MQ=255) cACCTTCCAGCGTTTCAGAGCCTGCCAATGAGTTATCAGGTCTTAGCCCGAAAATGGCGCCCACAAACCTTTGCTGACGTCGTCGGCCAGGAACATGTGCTGACCGCACTGGCGAACGGCTTGTCGTTAGGGCGTa < 1:208519/136‑1 (MQ=255) cGTTTCAGAGCCTGCCAATGAGTTATCAGGTCTTAGCCCGAAAATGGCGCCCACAAACCTTTGCTGACGTCGTCGGCCAGGAACATGTGCTGACCGCACTGGCGAACGGCTTGTCGTTAGGGCGTATTCATCATGCTTATCTTTTTTCCGGCACCCGTGGCGTCGGAAAAACCTCTATCGCCCGACTGCTGGCGAAGGGGCTAAACTGCGAAACCGGCATTACCGCGACGCCGTGCGGCGTGTGCGATAACTGTCGTGAAATCGAGCAGGGgcgc > 1:452073/1‑275 (MQ=255) tttCAGAGCCTGCCAATGAGTTATCAGGTCTTAGCCCGAAAATGTCGCCCACAAACCTTTGCTGACGTCGTCGGCCAGGAACATGTGCTGACCGCACTGGCGAACGGCTTGTCGTTAGGGCGTATTCATCATGCTTATCTTTTTTCCGGCACCCGTGGCGTCGGAAAAACCTCTATCGCCCGANTGCTGGCGAAGGGGCTAAACTGCGAAACCGGCATTACCGCGACGCCGTgc > 1:521553/1‑234 (MQ=255) ttCAGAGCCTGCCCATGAGTTATCAGGTCTTAGCCCGAAAATGGCGCCCACAAACCTTTGCTGACGTCGTCGGCCAGGAACATGTGCTGACCGCACTGGCGAACGGCTTGTCGTTAGGGCGTCTTCATCATGCTTATCTTTTTTCCGGCCCCCGTGGCGTCGGAAAAACCTCTATCGCCCGACTGCTGGCGAAGGGGCTAAACTGCGAAACCGGCATTACCGCGACGCCGTTCGGCGTGTGCGATAACTGACGCGAAATCGAGCAGAGGAGCttt > 1:262898/1‑275 (MQ=255) tGCCAATGAGTTATCAGGTCTTAGCCCGAAAATGGCGCCCACAAACCTTTGCTGACGACGTCGACCAGGTACATGTGCTGACCGCACTGGCGAACGGCTTGTCGCTAGGGCGAATTCATGATGCTGATCTTTTTTCCGGCACCCGTGGCGTCGGACACACCTCTATCGCCCGACTGCTGGCGAAGGGGCTAACCTGCGAAAGCGGCATTACCGCCACACCGGGCGCCATGGTCGGACACTGTCGTGAACTCGAGCAGGGGGGCNTGGTCgtt > 2:70244/1‑270 (MQ=255) | AGCGACCGTTAAACTGATCCGTCGTCTGGGTGGTGAAGTGGCTGACGCTGCGTTCATTATCAACCTGTTCGATCTCGGCGGCGAACAGCGTCTCGAAAAACAGGGCATTACCAGCTACAGCCTTGTCCCGTTCCCGGGCCATTAATTATCGCCAGTCTTGTGCTGCCCACGCTACGGACAGCACAAGATGTGCATTCAGCCTCGCCGTTCTGACGGGGCTGTGTTAGCATTACCCCTTCGTGAATCCACCTTCCAGCGTTTCAGAGCCTGCCAATGAGTTATCAGGTCTTAGCCCGAAAATGGCGCCCACAAACCTTTGCTGACGTCGTCGGCCAGGAACATGTGCTGACCGCACTGGCGAACGGCTTGTCGTTAGGGCGTATTCATCATGCTTATCTTTTTTCCGGCACCCGTGGCGTCGGAAAAACCTCTATCGCCCGACTGCTGGCGAAGGGGCTAAACTGCGAAACCGGCATTACCGCGACGCCGTGCGGCGTGTGCGATAACTGTCGTGAAATCGAGCAGGGGCGCTTTGTCGAT > CP009273/487275‑487814 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |