New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 665422	23 (0.600)	4 (0.110)	4/298	NT	11.5%	coding (607/642 nt)	nadD	nicotinic acid mononucleotide adenylyltransferase, NAD(P)‑dependent
	?	CP009273	= 666176	40 (1.100)					coding (886/1032 nt)	holA	DNA polymerase III, delta subunit

AACATTATTAGGGATGATTGTGACCCGCGTCAGACCAATCAAATTCGCCAGCGTTTCCACGGGTTTTAGATGACCATAGTGCACCGGATCAAAGGTGCCGCCAAACAGAGCCTGTAAAGATTTCATATCAACCGTCGATAAATACGTCCGCCAGGGGTTTATGGCACAACAGAAGAGATAACCCTTCCAGCTCTGCCCACACTGACTGACCGTAATCTTGTTTGAGGGTGAGTTCCGTTCGTGTCAGGAGTTGCACGGCCTGACGTAACTGCGTCTGACTTAAGCGATTTAACGCCTCGCCCATCATGCCCCGGCGGTTCTGCCATACCCGATGCTTATCAAACAACGCACGCAGTGGCGTATGGGCAGACTGGCGTTTCAGGTTAACCAGTAACAACAGTTCACGTTGTAATGTGCGCAACAAAATAACCGGTTCGCTGCCTTCCAGACGCAGTTGCTGAAGAATATGCAATGCGCGCTTACTTTTTCCCATCAACAAAGCATCAACCCAA  >  CP009273/665903‑666414                                                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                               aaCATTATTATGGGTGAGTGTTANGTGCGTCAGACCAATCAAATTCGAAAGCGTTTCCCCGGGTTTTAGATGACCATAGTGCACCGGATCAAAGGTGCCGCCAAACAGAGCCTGTAAAGATTTCATATCAACCGTCGATAAATACGTCCGCCAGGGGTTTATGGCACAACAGAAGAGATAACCCTTCCAGCTCTGCCCACACTGACTGACCGTAATCTTGTTTGAGGGTGAGTTCCGTTCGTGTCAGGAGTTGCACGGCCTGACGTAACTGCGt                                                                                                                                                                                                                                                <  2:430940/274‑1 (MQ=255)                                                                  ttAGATGACCATAGTGCACCGGATCAAAGGTGCCGCCAAACAGAGCCTGTAAAGATTTCATATCAACCGTCGATAAATACGTCCGCCAGGGGTTTATGGCACAACAGAAGAGATAACCCTTCCAGCTCTGCCCACACTGACTGACCGTAATCTTGTTTGAGGGATAGTTCCGTTCGTGTCAGGNGTTGCACGGCCTGACGTAACTGCGTCTGACTTAAGCGATTTAACGCCTCGc                                                                                                                                                                                                                      >  1:542910/1‑235 (MQ=255)                                                                         aCCATGGGGCACCGGAGCAAAGGGGCCGCCAAACTGAGCCTTTAAAGATTTCATATCAACCGTCGATAAATACGTCCGCCAGGGGTTTATGNCACAACAGAAGAGATAACCCTTCCAGCTCTGCCCACACTGACTGACCGTAATCTTGTTTGAGGGTGAGTTCCGTTCGTGTCAGGAGTTGCACGGCCTGACGTAACTGCGTCTGACTTAAGCGATTTAACGCCTCGCCCATCATGCCCCGGCGGAGCTGTCATACCCGGTGCTTATCAaacaac                                                                                                                                                                       <  1:492969/275‑1 (MQ=255)                                                                                tGCACCGGATCAAAGGTGCCGCCAAACAGAGCCTGTAAAGATTTCATATCAACCGTCGATAAATACGTCCGCCAGGGGTTTATGGCACAACNGAAGAGATAACCCTTCCAGCTCTGCCCACACTGACTGACCGTAATCTTGTTTGAGGGTGAGTTCCGTTCGTGTCAGGAGTTGCACGGCCTGACGTAACTGCGTCTGACTTAAGCGATTTAACGCCTCGCCCATCATGCCCCGGCGGTTCTGCCGTACCCGAAGCTTATCAAACAAcgcacgca                                                                                                                                                                <  1:495993/275‑1 (MQ=255)                                                                                     cGGATCAAAGGTGCCGCCAAACAGAGCCTGTAAAGATTTCATATCAACAGTCGATAAATACGTCCGCCAGGGGTTTATGGCACAACAGAAGAGATAACCCTTCCAGCTCTGCCCACACTGACTGACCGTAATCTTGTTTGAGGGTGAGTTCCGTTAGTGTCAGGAGTTGCACGGCCTGACGTAACTGGGTCTGACTTAATCGATTTAAAGCCACGCCCATCATGCCCCGCGGGTGTTGCCATACCCGATTCGTATCAAACACCGCACGCAgaat                                                                                                                                                            >  2:226096/1‑271 (MQ=255)                                                                                      ggATCAAAGGTGCCGCCAAACAGAGCCTGTAAAGATTTCATATCAACCGTCGATAAATACGTCCGCCAGGGGTTTATGGCACAACAGAAGAGATAACCCTTCCAGCTCTGCCCACACTGACTGACCGTAATCTTGTTTGAGGGTGAGTTCCGTTCGTGTCAGGAGTTGCACGGCCTGACGTAACTGCGt                                                                                                                                                                                                                                                <  1:533824/189‑1 (MQ=255)                                                                                        ttCAAAGGTGCCGAAAAAAAGAGACAGTAGAGATTTCATATCAACCGTCGATAAATACGTCCGCCAGGGGTTTATGGCACAACAGAAGAGATAACAATTCGAGCTCTGCCAACACTGACTGACCGTAATCTAGTTTGAGGGTGAGTTCCGTTCGTGTCAGGAGTTGCACGGCCTGACGTAACTGCGTATGACGTAAGCGATTTAACGCCACGACAACCCTGCCCAGGCGGTTGTCCCATCCCCGCCGCTTAACCAACACcccacgcacgggcctc                                                                                                                                                        >  2:717637/2‑267 (MQ=255)                                                                                         tCAAAGGTGCCGCCAAACAGAGCCTGTAAAGATTTCATATCAACCGTCGATTAATACGTCCGCCAGTGGTTTATGGCACAACAGAAGAGATAACCCTTCCAGCTCTGCCCACACTGACTGACCGTAATCTTGTTTGAGGGTGAGTTCCGTTCGTGTCAGGAGTTGCACGGCCTGACGTAACTGCGTCTGACGTAAGCGATTTAACGCCTCGCCCATCATGCCCCGGCGGTTCTGCCATACCCGATGCTTATCAAACAACGCACGCAGt                                                                                                                                                              <  1:226101/268‑1 (MQ=255)                                                                                                 gccgccAAACAGAGCCTGTAAAGATTTCATATCAACCGTCGATAAATACGTCCGCCAGGGGTTTATGGCACAACAGAAGAGATAACCCTTCCAGCTCTGCCCACACTGACTGACCGTAATCTTGTTTGAGGGTGAGTTCCGTTCGTGTCAGGAGTTGCACGGCCTGACGTAACTGCGTCTGACTTAAGCGATTTAACGCCTCGCCCATCATGCCCcgg                                                                                                                                                                                                        >  1:221606/1‑218 (MQ=255)                                                                                                  ccgccAAACAGAGCCTGTAAAGATTTCATATCAACCGTCGATAAATACGTCCGCCAGGGGTTTATGGCACAACAGAAGAGATAACCCTTCCAGCTCTCCCCATACTGACTGACCGTAATCGTGTTTGAGGGTGAGTTCAGTTCGTGTCAGGAGTTGCACGGCCTGACGTAACTGCGTCTTACTTAAGCGATTTAACGCCTCGCCCATCATGCCCCGGCGGTTCTGCCATACCCGATGCTTATCAAACAACGCCCGCAGTTGCGTATGGGCCGACt                                                                                                                                              >  2:322641/1‑275 (MQ=255)                                                                                                     ccAAACAGAGCCTGTAAAGATTTCATATCAACCGTCGATAAATACGTCCGCCAGGGGTTTATGGCACAACAGAAGAGATAACCCTTCCAGCTCTGCCCACACTGACTGACCGTAATCTTGTTTGAGGGTGAGTTCCGTTCGTGTCAGGAGTTGCACGGCCTGACGTAACTGCGTCTGACTTAAGCGATTTAACGCCTCGCCCATCATGCCCCGGCGGt                                                                                                                                                                                                    <  2:221601/218‑1 (MQ=255)                                                                                                                    aaaGAGTTCATATCAACCGTCGATAAATACGTCCGCCAGGGGTTTATGGCACAACAGAAGAGATAACCCTTCCAGCTCTGCCCACACTGACTGACCGTAATCTTTTTTGAGGGTGAGTGCCGGTCGTGTCAGGAGTTGCACGGCCTGACGTAACTGCGTCTGACTTAAGCGATTTAACGCCTCTCCCATCATGCCCCGGCGGTTCTGCCATACCCGATGCTTATCAAACAACGCACGCAGTGGCGTATGGGCAGACTGGCGTTGCAGGTTAAcc                                                                                                                             <  1:717647/274‑1 (MQ=255)                                                                                                                         tttCATATCAACCGTCGATAAATACGTCCGCCAGGGGTTTATGGCACAACAGAAGAGATAACCCTTCCAGCTCTGCCCACACTGACTGACCGTAATCTTGTTTGAGGGTGAGTTCCGTTCGTGTCAGGAGTTGCACGGCCTGACGTAACTGCATCTGACTTAAGAGATTTAACGCCTCGCCCATCATGCCCCGGCTGTTCTGCCATACCCGATGCTTATCAAAAAACGCACGAAGTGGCGTATGGGAAAACTGGCGTTTCAGGTTCACAAGGaac                                                                                                                       >  1:696629/1‑275 (MQ=255)                                                                                                                                                     cGCCAGGGGTTTATGGCACAACAGAAGAGATAACCCTTCCAGCTCTGCCCACACTGACTGACCGTAATCTTGTTTGAGGGTGAGTTCCGTTCGTGTCAGGAGTTGCACGGCCTGACGTAACTGCGTCTGACTTAAGCGATTTAACGCCTCGCCCATCATGCCCAGGCGGTTCTGCCATACCCGNTGCTTATCAAACAACGCACGCAGTGGCGTATGGGCAGACTGGCGTTTCAGGTTAACCAGTAACAACAGTTCACGTTGTAATGTGCGcaac                                                                                            >  1:546318/1‑274 (MQ=255)                                                                                                                                                            ggTTTATGGCACAACAGAAGAGTTAACCCTTCCAGCTCTGCCCACACTGACTGACCGTAATCTTGTTTGAGGGTGAGTTCCGTTCGTGTCAGGAGTTGCACGGCCTGACGTAACTGCGTCTGACTTAAGCGATTTAACGCCTCGCCCATCATGCCCCGGCGGTTCTGCCATACCCGATGCTTATCAAACAACGCACGCAGTGGCGTATGGGCAGACTGGCGTTTCAGGTTAACCAGTAACAACAGTTCACGTTGTAATGTGCGCAACAAAATAAc                                                                                    <  1:322647/275‑1 (MQ=255)                                                                                                                                                               ttATGGCACAACAGAAGAGATAACCCTTCCAGCTCTGCCCACACTGACTGACCGTAATCTTGTTTGAGGGTGAGTTCCGTTCGTGTCAGGAGTTGCACGGCCTGACGTAACTGCGTCTGACTTAAGCGATTTAACGCCTCGCCCATCATGCCCCGGCGGTTCTGCCATACCCGATGCTTATCAAACAACGCACGCAGTGGCGTATGGGCAGACTGGCGTTTCAGGTTAACCAGTAACAACAGTTCACATTGTAATGTGCGCAACAAAATAACCga                                                                                 >  1:264051/1‑274 (MQ=255)                                                                                                                                                                          caGAAGAGATAACCCTTCCAGCTCTGCCCACACTGACTGACCGTAATCTTGTTTGAGGGTGAGTTCCGTTCGTGTCAGGAGTTGCACGGCCTGACGTAACTGCGTCTGACTTAAGCGATTTAACGCCTCGCCCATCATGCCCcg                                                                                                                                                                                                         >  2:165882/1‑144 (MQ=255)                                                                                                                                                                              agagATAACCCTTCCAGCTCTGCCCACACTGACTGACCGTAATCTTGTTTGAGGGTGAGTTCCGTTCGTGTCAGGAGTTGCACGGCCTGACGTAACTGCGTCTGACTTAAGCGATTTAACGCCTCGCCCATCATGCCCcggcgg                                                                                                                                                                                                     <  1:165885/144‑1 (MQ=255)                                                                                                                                                                                  aTAACCCTTCCAGCTCTGCCCACACTGACTGACCGTAATCTTGTTTGAGGGTGAGTTCCGTTCGTGTCAGGAGTTGCACGGCCTGACGTAACTGCGTCTGACTTAAGCGATTTAACGCCTCGCCCATCATGCCCCGGCGGTTCTGCCATACCCGATGCTTATCAAACAACGCACGCAGTGGCGTATGGGCAGACTGGCGTTTCAGGTTAACCAGTAACAACAGTTCACGTTGTAATGTGCGCAACAAAATAACCGGTTCGCTGCCTTCCAGACga                                                              >  1:446788/1‑274 (MQ=255)                                                                                                                                                                                   tAACCCTTCCAGCTCTGCCCACACTGACTGACCGTAATCTTGTTTGAGGGTGAGTTCCGTTCGTGTCAGGAGTTGCACGGCCTGACGTAACTGCGTCTGACTTAAGCGATTTAACGCCTCGCCCATCATGCCCCGGCGGTTCTGCCATACCCGATGCTTATCAAACAACGCACGCAGTGGCGTATGGGCAGACTGGCGTTTCAGGTTaa                                                                                                                               <  2:138014/209‑1 (MQ=255)                                                                                                                                                                                    aaCCCTTCCAGCTCTGCCCACACTGACTGACCGTAATCTTGTTTGAGGGTGAGTTCCGTTCGTGTCAGGAGTTGCACGGCCTGACGTAACTGCGTctgacttacattaaccaacaaggcttgtatcgctgatacctgtcgttacggagggcatgatgcgactgtggttaattcgtcatggtgaaacgcaagcgaatatcgatggtctttacagcggtcat                                                                                                                   <  2:381886‑M2/220‑126 (MQ=255)                                                                                                                                                                                    aaCCCTTCCAGCTCTGCCCACACTGACTGACCGTAATCTTGTTTGAGGGTGAGTTCCGTTCGTGTCAGGAGTTGCACGGCCTGACGTAACTGCGTCTGACTTAAGCGATTTAACGCCTCGCCCATCATGCCCCGGCGGTTc                                                                                                                                                                                                  >  1:347918/1‑141 (MQ=255)                                                                                                                                                                                    aaCCCTTCCAGCTCTGCCCACACTGACTGACCGTAATCTTGTTTGAGGGTGAGTTCCGTTCGTGTCAGGAGTTGCACGGCCTGACGTAACTGCGTCTGACTTAAGCGATTTAACGCCTCGCCCATCATGCCCCGGCGGTTCTGCCATACCCGATGCTTATCAAACAACGCACGCAGTGGCGTATGGGCAGACTGGCGTTTCAGGTTAACCAGTAACAACAGTTCACGTTGTAATGTGCGCAACAAAATAACCGGTTCGCTGCCATCCAGACGCa                                                             <  1:711979/274‑1 (MQ=255)                                                                                                                                                                                       ccTTCCAGCTCTGCCCACACTGACTGACCGTAATCTTGTTTGAGGGTGAGTTCCGTTCGTGTCAGGAGTTGCACGGCCTGACGTAACTGCGTCTGACTTAAGCGATTTAACGCCTCGCCCATCATGCCCCGGCGGTTCTGCCATACCCGATGCTTATCAAACAACGCACGCAGTGGCGTATGGGCAGACTGGCGTTTCAGGTTAACCAGTAACAACAg                                                                                                                  >  2:578764/1‑218 (MQ=255)                                                                                                                                                                                        cTTCCAGCTCTGCCCACACTGACTGACCGTAATCTTGTTTGAAGGTGAGTTCCGTTCGTGTCAGGAGTTGCACGGCCTGACGTAACTGCGTctgacttacattaaccaacaaggcttgtatcgctgatacctgtcgttacggagggcatgatgcgactgtggttaattcgtcatggtgaaacgcaagcgaatatcgatggtctttacagcggtcatgcgc                                                                                                               >  1:381892‑M2/1‑91 (MQ=255)                                                                                                                                                                                         ttCCAGCTCTGCCCACACTGACTGACCGTAATCTTGTTTGAGGGTGAGTTCCGTTCGTGTCAGGAGTTGCACGGCCTGACGTAACTGCGTCTGACTTAAGCGATTTAACGCCTCGCCCATCATGCCCCGGCGGTTCTGCCATAcc                                                                                                                                                                                         >  1:279698/1‑145 (MQ=255)                                                                                                                                                                                           ccAGCTCTGCCCACACTGACTGACCGTAATCTTGTTTGAGGGTGAGTTCCGTTCGTGTCAGGAGTTGCACGGCCTGACGTAACTGCGTCTGACTTAAGCGATTTAACGCCTCGCCCATCATGCCCCGGCGGTTCTGCCATACCCGATGCTTATCAAACAACGCACGCAGTGGCGTATGGGCAGACTGGCGTTTCAGGTTAACCAGTAACAACAGTTCa                                                                                                              <  1:578773/218‑1 (MQ=255)                                                                                                                                                                                             aGCTCTGCCCACACTGACTGACCGTAATCTTGTTTGAGGGTGAGTTCCGTTCGTGTCAGGAGTTGCACGGCCTGACGTAACTGCGTCTGACTTAAGCGATTTAACGCCTCGCCCATCATGCCCCGGCGGTTCTGCCATACCCGAt                                                                                                                                                                                     <  2:279693/145‑1 (MQ=255)                                                                                                                                                                                                 ctGCCCACACTGACTGACCGTAATCTTGTTTGAGGGTGAGTTCCGTTCGTGTCAGGAGTTGCACGGCCTGACGTAACTGCGTctgacttacattaaccaacaaggcttgtatcgctgatacctgtcgttacggagggcatgatgcgactgtggttaattcgtcatggtgaaacgcaagcgaatatc                                                                                                                                        <  2:623422‑M2/186‑105 (MQ=255)                                                                                                                                                                                                 ctGCCCACACTGACTGACCGTAATCTTGTTTGAGGGTGAGTTCCGTTCGTGTCAGGAGTTGCACGGCCTGACGTAACTGCGTCTGACTTAAGCGATTTAACGCCTCGCCCATCATGCCCCGGCGGTTCTGCCATACCCGATGCTTATCAAACAACGCACGCAGTGGCGTATGGGCAGACTGGCGTTTCAGGTTAACCAGTaacaa                                                                                                                     >  1:527224/1‑205 (MQ=255)                                                                                                                                                                                                     ccACACTGACTGACCGTAATCTTGTTTGAGGGTGAGTTCCGTTCGTGTCAGGAGTTGCACGGCCTGACGTAACTGCGTctgacttacattaaccaacaaggcttgtatcgctgatacctgtcgttacggagggcatgatgcgactgtggttaattcgtcatggtgaaacgcaagcgaatatcgatg                                                                                                                                    >  1:623431‑M2/1‑78 (MQ=255)                                                                                                                                                                                                     ccACACTGACTGACCGTAATCTTGTTTGAGGGTGAGTTCCGTTCGTGTCAGGAGTTGCACGGCCTGACGTAACTGCGTCTGACTTAAGCGATTTAACGCCTCGCCCATCATGCCCCGGCGGTTCTGCCATACCCGATGCTTATCAAACAACGCACGCAGTGGCGTATGGGCAGACTGGCGTTTCAGGTTAACCAGTAACAACAGt                                                                                                                 <  2:527216/205‑1 (MQ=255)                                                                                                                                                                                                            gactgacCGTAATCTTGTTTGAGGGTGAGTTCCGTTCGTGTCAGGAGTTGCACGGCCTGACGTAACTGCGTCTGACTTAAGCGATTTAACg                                                                                                                                                                                                                            >  2:460309/1‑91 (MQ=255)                                                                                                                                                                                                             actgacCGTAATCTTGTTTGAGGGTGAGTTCCGTTCGTGTCAGGAGTTGCACGGCCTGACGTAACTGCGTCTGACTTAAGCGATTTAACGCCTCGccc                                                                                                                                                                                                                    >  1:529505/1‑98 (MQ=255)                                                                                                                                                                                                             actgacCGTAATCTTGTTTGAGGGTGAGTTCCGTTCGTGTCAGGAGTTGCACGGCCTGACGTAACTGCGTCTGACTTAAGCGATTTAACGCCTCGCCCATCATGCCCCGGCGGTTCTGCCATACCCGATGCTTATCAAACAacgca                                                                                                                                                                    >  2:304526/1‑146 (MQ=255)                                                                                                                                                                                                             actgacCGTAATCTTGTTTGAGGGTGAGTTCCGTTCGTGTCAGGAGTTGCACGGCCTGACGTAACTGCGTCTGACTAAAGCGATTTAACGCCTCGCCCATCATGCCCCGGCGGTTCTGCCATACCCGATGCTTATCAAACAACGCACGCAGTGGCGTATGGGCAGACTGGCGTTTCAGGTTAACCAGTAACAACAGTTCACGTTGTAATTTGCGCAACAAAATAACCGGTTCGCTGCCTTCCAGACGCAGTTGCTGAAGAATATGCAACgctgg                                    >  2:111455/1‑271 (MQ=255)                                                                                                                                                                                                                gacCGTAATCTTGTTTGAGGGTGAGTTCCGTTCGTGTCAGGAGTTGCACGGCCTGACGTAACTGCGTCTGACTTAAGCGATTTAACGCCTc                                                                                                                                                                                                                        <  1:460316/91‑1 (MQ=255)                                                                                                                                                                                                                 acCGTAATCTTGTTTGAGGGTGAGTTCCGTTCGTGTCAGGAGTTGCACGGCCTGACGTAACTGCGTCTGACTTAAGCGATTTAACGCCTCGCCcatca                                                                                                                                                                                                                <  2:529497/98‑1 (MQ=255)                                                                                                                                                                                                                 acCGTAATCTTGTTTGAGGGTGAGTTCCGTTCGTGTCAGGAGTTGCACGGCCTGACGTAACTGCGTCTGACTTAAGCGATTTAACGCCTCGCCCATCATGCCCCGGCGGTTCTGCCATACCCGATGCTTATCAAACAAcgcacgca                                                                                                                                                                <  1:304532/146‑1 (MQ=255)                                                                                                                                                                                                                 acCGTAATCTTGTTTGAGGGTGAGTTCCGGTCGTGTCAGGAGTTGCACGGCCTGACGTAACTGCGTCTGACTTAAGCGATTTAACGCCTCGCCCATCATGCCCCGGCGGTTCTGCCATACCCGATGCTTATCAAACAACGCACGCAGTGGCGTATGGGCAGACTGGCGTTTCAGGTTAACCAGNAACAACATTTCACGTTGTAATGTGCGCAACAAAATAACCGATTCGCTGCCTTCCAGACGCAGTTGCTGAAGAATATGCAATGCGCGCTTaa                               >  1:493181/1‑274 (MQ=255)                                                                                                                                                                                                                     tAATCTTGTTTGAGGGTGAGTTCCGTTCGTGTCAGGAGTTGCACGGCCTGACGTAACTGCGTCTGACTTAAGCGATTTAACGCCTCGCCCATCATGCCCCGGCGGTTCTGCCATACCCGATGCTTATCCAACAACGCACGCAGTGGCGTATGGGAAGACTGGCGTTTCAGGTTAACCAGTAACAACAGTTCACGATATCATGTGCGCCACAAAATAACCGGTTCGCTTCCTTCCAGACGCAGTTGCTGAAAAATATGCCATGCTAGCttcaatt                            >  1:23960/1‑269 (MQ=255)                                                                                                                                                                                                                                      gAGTTCCGTTCGTGTCAGGAGTTGCACGGCCTGACGTAACTGCGTCTGACTTAAGCGATTTAACGCCTCGCCCATCATGCCCCGGCGGTTCTGCCATACCCGATGCTTATCAAACAACGCACGCAGTGGCGTATGGGCCGACTgg                                                                                                                                            >  1:12414/1‑145 (MQ=255)                                                                                                                                                                                                                                              ttCGTGTCAGGAGTTGCACGGCCTGACGTAACTGCGTCTGACTTAAGCGATTTAACGCCTCGCCCATCATGCCCCGGCGGTTCTGCCATACTCGATGCTTATCAAACAACGCACGCAGTGGCGTATGGGCAGACTGGCGCTTGAGGTTAACCAGTAACAACAGTTCACGCTGTAATGTGCGCAACCAAATAACCAGTTCGCTGCCGTCCAGACGCAGTTGCGGAATAATATGCAATGGGCGCTTACTTTTNTCCCTCAACTACTCATCATCCCac  >  2:421018/1‑274 (MQ=255)                                                                                                                                                                                                                                                                  gCCTGACGTAACTGCGTCTGACTTAAGCGATTTAACGCCTCGCCCATCATGCCCCGGCGGTTCTGCCATACCCGATGCTTATCAAACAacgcac                                                                                                                                                                   >  1:161742/1‑94 (MQ=255)                                                                                                                                                                                                                                                                      gACGTAACTGCGTCTGACTTAAGCGATTTAACGCCTCGCCCATCATGCCCCGGCGGTTCTGCCATACCCGATGCTTATCAAACAACGCACGCAg                                                                                                                                                               <  2:161739/94‑1 (MQ=255)                                                                                                                                                                                                                                                                             cTGCGTCTGACTTAAGCGATTTAACGCCTCGCCCATCATGCCCcg                                                                                                                                                                                                         >  2:455363/1‑45 (MQ=255)                                                                                                                                                                                                                                                                                 gTCTGACTTAAGCGATTTAACGCCTCGCCCATCATGCCCcggcgg                                                                                                                                                                                                     <  1:455370/45‑1 (MQ=255)                                                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                               AACATTATTAGGGATGATTGTGACCCGCGTCAGACCAATCAAATTCGCCAGCGTTTCCACGGGTTTTAGATGACCATAGTGCACCGGATCAAAGGTGCCGCCAAACAGAGCCTGTAAAGATTTCATATCAACCGTCGATAAATACGTCCGCCAGGGGTTTATGGCACAACAGAAGAGATAACCCTTCCAGCTCTGCCCACACTGACTGACCGTAATCTTGTTTGAGGGTGAGTTCCGTTCGTGTCAGGAGTTGCACGGCCTGACGTAACTGCGTCTGACTTAAGCGATTTAACGCCTCGCCCATCATGCCCCGGCGGTTCTGCCATACCCGATGCTTATCAAACAACGCACGCAGTGGCGTATGGGCAGACTGGCGTTTCAGGTTAACCAGTAACAACAGTTCACGTTGTAATGTGCGCAACAAAATAACCGGTTCGCTGCCTTCCAGACGCAGTTGCTGAAGAATATGCAATGCGCGCTTACTTTTTCCCATCAACAAAGCATCAACCCAA  >  CP009273/665903‑666414

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.