New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	1413126 =	35 (0.910)	43 (1.160)	12/302	NT	56.0%	coding (199/489 nt)	sieB	Rac prophage; phage superinfection exclusion protein
	?	CP009273	1413206 =	34 (0.920)					coding (279/489 nt)	sieB	Rac prophage; phage superinfection exclusion protein

TTTACTCCATTGTTGAAACTTTTTGCTAACGAGCCACTCGAAAGACTTATGTATACGATTATCATTTTTGGTCTCACTCTCTGGCTGATACCGAAAGAGTTTACTGTCGCATTCAATGCTTATACTGAAATACCTTGGCTCTTTCAGATTATCGTTTTTGCCTTTTCTTTCGTGGTCGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGCATCATTCAACATCAGAGTGATAGCGCAAACTGTTCTTATTATCTCGTCACCGAAAAATACTCCCATTTTATGAAGTTATTCTGGAACAGCAGGAGTAGACGTTTTAATCGTTAGCTTACTG  >  CP009273/1412940‑1413423                                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                          atcactctgatgttgAAACTTTTTGCTAACGAGCCACTCGAAAGACTTATGTATACGATTATCATTTTTGGTCTCACTCTCTGGCTGATACCGAAAGAGTTTACTGTCGCATTCAATGCTTATACTGAAATACCTTGGCTCTTTCAGATTATCGTTTTTGCCTTTTCTTTCGTGGTCGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCAACGAGTATTGCTTTGGTTATCTGCACACGAAATCGc                                                                                                                                                                                                                   >  2:140991/11‑275 (MQ=255)  tcactctgatgttgAAACTTTTTGCTAACGAGCCACTCGAAAGACTTATGTATACGATTATCATTTTTGGTCTCACTCTCTGGCTGATACCGAAAGAGTTTACTGTCGCATTCAATGCTTATACTGAAATACCTTGGCTCTTTCAGATTATCGTTTTTGCCTTGTCTTTCGTGGTCGCCATTTNCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCAACGAGTATTGCTTCGTTTCTCTGAGAAAGAAATCGc                                                                                                                                                                                                                   >  1:547801/10‑274 (MQ=255)           tgttgAAACTTTTTGCTAACGAGCCACTCGAAAGACTTATGTATACGATTATCATTTTTGGTCTCACTCTCTGGCTGATACCGAAAGAGTTTACTGTCGCATTCAATGCTTATACTGAAATACCTTGGCTCTTTCAGATTATCGTTTTTGCCTTTTCTTTCGTGGTCGCAATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTAATTACTACAAGAGCACCGAGTATTGATTCGTTTATCTGACAAAGAAATCGCTGTATTTaaa                                                                                                                                                                                                         >  1:88051/1‑275 (MQ=255)                                   cACTCGAGATACTGTTTTATACGAGTATCTTTTTTGGTCTCACTCTCTTGCTGATACCGAAAGAGTTTACTGTCGCATTCAATGCTTATACTGAAATAACTTGGCTCTTTCAGATTATCGTTTTTGCCTTTTCTTTCGTGGTCGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCtt                                                                                                                                                                                 <  2:88050/275‑1 (MQ=255)                                                             aTCATTTTTGGTCTCACTCTCTGGCTGATACCGAAAGAGTTTACTGTCGCATTCAATGCTTATACTGAAATACCTTGGCTATTTCAGATTATCGTTTTTGCCTTTTCTTTCGTGGTCGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCAACGAGTATTGCTTCGTTTATCTGAGAAAAAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCATATTATCACTTCTCCTTTCCGTAAacc                                                                                                                                                       >  2:328461/1‑275 (MQ=255)                                                                   tttGGTCTCACTCTCTGGCTGATACCGAAAGAGTTTACTGTCGCATTCAATGCTTATACTGAAATACCTTGGCTCTTTCAGATTATCGTTTTTGCCTTTTCTTTCGTGGTCGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCAACGAGTATTGCTTCGTTTATCTGAGAAAGAATTCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATATTATTAAAACTTCTCCTTGACTTAACCCGTTTAt                                                                                                                                                 >  2:683014/1‑275 (MQ=255)                                                                               ctctGGCTGATACCGAAAGAGTTTACTGTCGCATTCAATGCTTATACTGAAATACCTTGGCTCTTTCAGATTATCGTTTTTGCCTTTTCTTTCGTGGTCGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGa                                                                                                                                     <  1:140992/275‑1 (MQ=255)                                                                               atatGGATGATAAGGAAAGAGTTTACTGTCGCATTCAATGCTTATAATGAAATACCTTGGCTCTTTCAGATTATCGTTTTTGCCTTTTCTTTCGTGGTCGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGa                                                                                                                                     <  2:547792/272‑1 (MQ=255)                                                                                                         tGTCGCATTCAATGCTTATACTGAAATACCTTGGCTCTTTCAGATTATCGTTTTTGCCTTTTCTTTCGTGGTCGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTGAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGCATCATTCAAAATCaga                                                                                                           >  1:364396/1‑275 (MQ=255)                                                                                                            cGCATTCAATGCTTATACTGAAATACCTTGGCTCTTTCAGATTATCGTTTTTGCCTTTTCTTTCGTGGTCGCCATTTCCTTCTCAAGATTGCGAGCACATATTTAACAGCATTATTCATTACTACCAGAGCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGACATCTTATTATCACTTATCCTTGCAGTAACCCGGTTATGAAAAAATTAGAACGAAAGGACATCATTCAAAATCAGCGTg                                                                                                        >  1:268247/1‑275 (MQ=255)                                                                                                                  cAATGCTTATACTGAAATACCTTGGCTCTTTCAGATTATCGTTTTTGCCTTTTCTTTCGTGGTCGCCATTTCCTTCTCCAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTCTGAAAAAATTAGAACGGAAGGGCATCATTCAACATCAGAGTGATAgc                                                                                                   <  1:683023/274‑1 (MQ=255)                                                                                                                                              tttCAGATTATCGTTTTTGCCTTTTCTTTCGTGGTCGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTa                                                                                                                                                  >  1:67427/1‑199 (MQ=255)                                                                                                                                                  aGATTATCGTTTTTGCCTTTTCTTTCGTGGTCGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGaa                                                                                                                                              <  2:67426/199‑1 (MQ=255)                                                                                                                                                                                                AAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGCATCATTCAACATCAGAGTGATAGCGCAAACTGTTCTTATTATCTCGTCACCGAAAAATACTCCCATTTTATg                                                   <  1:435509‑M1/244‑1 (MQ=255)                                                                                                                                                                                                    ttGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGCATCATTCAACATCAGAGTGATAGCGCAAACTGTTCTTATTATCTCGTCACCGAAAAATACTCCCATTTTATGAAGt                                               <  2:435502/244‑1 (MQ=255)                                                                                                                                                                                                       taaaattatatTTATAAGAATTATTATTTACTACCAGAGCAACGAGNTTTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGCATCATTCAACATCAGAGTGATAGCGCAAACTGTTCTTATTATCTCGTCACCGAAAAATACTCCCATTTTATGAAGTTATTCTGGAACAGCAGGAGTAGACGTTTTAATCg             <  2:450077/268‑1 (MQ=255)                                                                                                                                                                                                       cGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCAACGAGCATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCTGGTTATGAAAAAATTAGAACGGAAGGGCATAATTCAACATCAGAGTGATAGCGCAAACTGTTATTATTATCTCGTCACAGAAAAATACTCCCATTTTATGAAGTTATTATGAAACAGCAGGAGTAGACGATTTACTCg             >  1:202531/1‑275 (MQ=255)                                                                                                                                                                                                            caatactcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttgagaaagaaa                                                                                                                                                                                                                       >  1:618174‑M2/64‑68 (MQ=255)                                                                                                                                                                                                            caatactcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttgagaaAGAAAt                                                                                                                                                                                                                      >  2:396759‑M2/64‑69 (MQ=255)                                                                                                                                                                                                            caatactcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttgagaaAGAAATc                                                                                                                                                                                                                     >  2:478084‑M2/64‑70 (MQ=255)                                                                                                                                                                                                            caatactcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttgagaaAGAAATCGCTGTATTTAAAGa                                                                                                                                                                                                       >  2:497260‑M2/64‑84 (MQ=255)                                                                                                                                                                                                            caatactcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttgagaaAGAAATCGCTGTATTTAAAGa                                                                                                                                                                                                       >  1:147671‑M2/64‑84 (MQ=255)                                                                                                                                                                                                            caatactcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttgagaaAGAAATCGCTGTATTTAAAGa                                                                                                                                                                                                       >  2:616023‑M2/64‑84 (MQ=255)                                                                                                                                                                                                            caatactcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttgagaaAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTa                                                                                                                                                  >  1:586533‑M2/64‑137 (MQ=255)                                                                                                                                                                                                            caatactcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttgagaaAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGaaaaaa                                                                                                                                          >  2:526701‑M2/64‑145 (MQ=255)                                                                                                                                                                                                            caatactcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttgagaaAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGaaaaaa                                                                                                                                          >  2:149011‑M2/64‑145 (MQ=255)                                                                                                                                                                                                            caatactcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttgagaaAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGaaaaaa                                                                                                                                          >  1:21714‑M2/64‑145 (MQ=255)                                                                                                                                                                                                            caatactcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttgagaaAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGaaaa                                                                                                                                            >  2:581329‑M2/64‑143 (MQ=255)                                                                                                                                                                                                            caatactcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttgagaaAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAAt                                                                                                                                         >  2:144034‑M2/64‑146 (MQ=255)                                                                                                                                                                                                            caatactcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttgagaaAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAAt                                                                                                                                         >  2:568564‑M2/64‑146 (MQ=255)                                                                                                                                                                                                            caatactcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttgagaaAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAAt                                                                                                                                         >  2:335520‑M2/64‑146 (MQ=255)                                                                                                                                                                                                            caatactcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttgagaaAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAAt                                                                                                                                         >  1:313655‑M2/64‑146 (MQ=255)                                                                                                                                                                                                            caatactcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttgagaaAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAAt                                                                                                                                         >  1:281319‑M2/64‑146 (MQ=255)                                                                                                                                                                                                            caatactcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttgagaaAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGGACGGAAGGGCATCATTCAACATCAGAGTGATAGCGCAAACTGTTCTTATTATCTCGTCACCGAAAAATACTCCCATTTTATGAAGTTATTCTGGAACAGAAGGAGTAGACGTATTAATCATTAg         >  1:580591‑M2/64‑274 (MQ=255)                                                                                                                                                                                                            caatactcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttgagaaAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGCATCATTCAACATCaga                                                                                                           >  2:539915‑M2/64‑176 (MQ=255)                                                                                                                                                                                                            caatactcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttgagaaAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGCATCATTCAACATCaga                                                                                                           >  2:146606‑M2/64‑176 (MQ=255)                                                                                                                                                                                                            caatactcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttgagaaAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGCATCATTCAACATCAGAGTGa                                                                                                       >  2:308999‑M2/64‑180 (MQ=255)                                                                                                                                                                                                            caatactcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttgagaaAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGCATCATTCAACATCAGAGTGa                                                                                                       >  2:60132‑M2/64‑180 (MQ=255)                                                                                                                                                                                                            caatactcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttgagaaAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGCATCATTCAACATCAGAGTGa                                                                                                       >  1:94190‑M2/64‑180 (MQ=255)                                                                                                                                                                                                            acaTATTCAAAAGCATTATTCATTACTACCAGAGCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGCATCATTCAACATCAGAGTGATAGCGCAAACTGTTCTTATTATCTCGTCACCGAAAAATACTCCCATTTTATGAAGTTATTCTGGAACAGCAGGAGTAGACGTTTTAATCGTTAGc        <  1:331970/275‑1 (MQ=255)                                                                                                                                                                                                                actcgttgctcttgtagtaatgaataatgcttttgaatatgtgctcgcaatcttgagaaAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAAtt                                                                                                                                        <  1:581338‑M2/84‑1 (MQ=255)                                                                                                                                                                                                                actcgttgctctggtagtaatgaataatgcttttgcatatgtgctcgcaatcttgagaaAGAAATCGCTg                                                                                                                                                                                                                 <  1:478091‑M2/11‑1 (MQ=255)                                                                                                                                                                                                                actcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttgagaaAGAAATCGc                                                                                                                                                                                                                   <  2:618165‑M2/9‑1 (MQ=255)                                                                                                                                                                                                                actcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttgagaaAGAAATCGCt                                                                                                                                                                                                                  <  1:396766‑M2/10‑1 (MQ=255)                                                                                                                                                                                                                actcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttgagaaAGAAATCGCTGTATTTAAAGATTTc                                                                                                                                                                                                   <  2:147670‑M2/25‑1 (MQ=255)                                                                                                                                                                                                                actcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttgagaaAGAAATCGCTGTATTTAAAGATTTc                                                                                                                                                                                                   <  1:616032‑M2/25‑1 (MQ=255)                                                                                                                                                                                                                actcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttgagaaAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGaa                                                                                                                                              <  2:586524‑M2/78‑1 (MQ=255)                                                                                                                                                                                                                actcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttgagaaAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAg                                                                                                                                      <  2:21714‑M2/86‑1 (MQ=255)                                                                                                                                                                                                                actcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttgagaaAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAg                                                                                                                                      <  1:149012‑M2/86‑1 (MQ=255)                                                                                                                                                                                                                actcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttgagaaAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGa                                                                                                                                     <  2:281314‑M2/87‑1 (MQ=255)                                                                                                                                                                                                                actcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttgagaaAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGa                                                                                                                                     <  1:144035‑M2/87‑1 (MQ=255)                                                                                                                                                                                                                actcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttgagaaAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGa                                                                                                                                     <  2:313649‑M2/87‑1 (MQ=255)                                                                                                                                                                                                                actcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttgagaaAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGa                                                                                                                                     <  1:568573‑M2/87‑1 (MQ=255)                                                                                                                                                                                                                actcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttgagaaAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGa                                                                                                                                     <  1:335526‑M2/87‑1 (MQ=255)                                                                                                                                                                                                                actcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttgagaaAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGCATCATTCAACATCAGAGTGa                                                                                                       <  1:146607‑M2/117‑1 (MQ=255)                                                                                                                                                                                                                actcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttgagaaAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGCATCATTCAACATCAGAGTGATAgc                                                                                                   <  2:94189‑M2/121‑1 (MQ=255)                                                                                                                                                                                                                actcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttgagaaAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGCATCATTCAACATCAGAGTGATAgc                                                                                                   <  1:309005‑M2/121‑1 (MQ=255)                                                                                                                                                                                                                actcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttgagaaAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGCATCATTCAACATCAGAGTGATAgc                                                                                                   <  1:60133‑M2/121‑1 (MQ=255)                                                                                                                                                                                                                actcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttgagaaAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAAAGGAAGGGCATCATTCAACATCAGAGTGa                                                                                                       <  1:539923‑M2/117‑1 (MQ=255)                                                                                                                                                                                                                actcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttgagaaAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCCTGCCGTAACCCTGTTATGAAACAATTAg                                                                                                                                      <  1:526709‑M2/86‑1 (MQ=255)                                                                                                                                                                                                                actcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttctgaaGAACATCGCCGTATTTAAAGATATc                                                                                                                                                                                                   <  1:497267‑M2/25‑1 (MQ=255)                                                                                                                                                                                                                  tagtttatttggtagtaatgaataatgcttttgaatatgtgctcgcaatctttagaaAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGCATCATTCAACATCAGAGTGATAGCGCAAACTGTTCTTATTATCTCGTCACCGAAAAATACTCCCATTTTATGAAGTTATTCTGGAACAGCAGGAGTAGACGTTTTAATCGTTAGCTTACtg  <  2:580582‑M2/218‑1 (MQ=255)                                                                                                                                                                                                                      aaGCATTATTCATTACTACCAGAGCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAAt                                                                                                                                                                                                                      >  1:3988/1‑59 (MQ=255)                                                                                                                                                                                                                      aaGCATTATTCATTACTACCAGAGCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGCATCATTCAACATCAGAGTGATAGCGCAAACTGTTCTTATTATCTCGTCACCGAAAAATACTCCCATTTTATGAAGTTATTCTGGAACAGCAGGAGTAGACGTTTTa                 >  1:450084/1‑256 (MQ=255)                                                                                                                                                                                                                        gCATTATTCATTACTACCAGAGCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGcat                                                                                                                         >  1:44895/1‑150 (MQ=255)                                                                                                                                                                                                                          attattCATTACTACCAGAGCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCt                                                                                                                                                                                                                  <  2:3988/59‑1 (MQ=255)                                                                                                                                                                                                                            tattCATTACTACCAGAGCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGCATCAtt                                                                                                                     <  2:44895/150‑1 (MQ=255)                                                                                                                                                                                                                            tattCATTACTACCAGAGCAACGAGTATTGCTTCGTTCATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCtta                                                                                                                                                                                >  2:66171/1‑91 (MQ=255)                                                                                                                                                                                                                                cATTACTACCAGAGCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTtattat                                                                                                                                                                            <  1:66172/91‑1 (MQ=255)                                                                                                                                                                                                                                        ccAGAGCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGCATCATTCAACATCAGAGTGATAg                                                                                                    >  1:674589/1‑155 (MQ=255)                                                                                                                                                                                                                                            agCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGCATCATTCAACATCAGAGTGATAGCGCa                                                                                                <  2:674580/155‑1 (MQ=255)                                                                                                                                                                                                                                            agCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGCATCATTCAACATCAGAGTGATAGCGCAAACTGTTCTTATTATCTCGTCACCGAAAAATACTCCCATTTTATGAAGTTATTCTGGa                                      >  1:308802/1‑213 (MQ=255)                                                                                                                                                                                                                                                aCGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGCATCATTCAACATCAGAGTGATAGCGCAAACTGTTCTTATTATCTCGTCACCGa                                                                      >  1:451602/1‑177 (MQ=255)                                                                                                                                                                                                                                                aCGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGCATCATTCAACATCAGAGTGATAGCGCAAACTGTTCTTATTATCTCGTCACCGAAAAATACTCCCATTTTATGAAGTTATTCTGGAAcag                                  <  2:308796/213‑1 (MQ=255)                                                                                                                                                                                                                                                   aGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGCATCATTCAACATCAGAGTGATAgcg                                                                                                  >  1:102431/1‑146 (MQ=255)                                                                                                                                                                                                                                                    gTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGCATCATTCAACATCAGAGTGATAGCGCAAACTGTTCTTATTATCTCGTCACCGaaaaa                                                                  <  2:451595/177‑1 (MQ=255)                                                                                                                                                                                                                                                       ttGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGCATCATTCAACATCAGAGTGATAGCGCaaa                                                                                              <  2:102430/146‑1 (MQ=255)                                                                                                                                                                                                                                                             cGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGCATCATTCa                                                                                                                   >  2:513264/1‑119 (MQ=255)                                                                                                                                                                                                                                                               tttATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACa                                                                                                                                                                                          >  1:45933/1‑46 (MQ=255)                                                                                                                                                                                                                                                                 tATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAATATTAGAACGGAAGGGCATCATTCAACAt                                                                                                               <  1:513271/119‑1 (MQ=255)                                                                                                                                                                                                                                                                   tCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGaa                                                                                                                                                                                      <  2:45933/46‑1 (MQ=255)                                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                          TTTACTCCATTGTTGAAACTTTTTGCTAACGAGCCACTCGAAAGACTTATGTATACGATTATCATTTTTGGTCTCACTCTCTGGCTGATACCGAAAGAGTTTACTGTCGCATTCAATGCTTATACTGAAATACCTTGGCTCTTTCAGATTATCGTTTTTGCCTTTTCTTTCGTGGTCGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGCATCATTCAACATCAGAGTGATAGCGCAAACTGTTCTTATTATCTCGTCACCGAAAAATACTCCCATTTTATGAAGTTATTCTGGAACAGCAGGAGTAGACGTTTTAATCGTTAGCTTACTG  >  CP009273/1412940‑1413423

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.