New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	2607606 =	26 (0.680)	4 (0.110)	4/298	NT	15.8%	coding (314/849 nt)	focB	putative formate transporter
	?	CP009273	2608243 =	18 (0.490)					coding (998/1062 nt)	yfgO	putative UPF0118 family inner membrane permease

TTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTGGTGAGTATGTGTTATCGGGCTATTTATTTACGTCAGGAACCCTGAAAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATC‑CCCACAAACCACCGAAGATCACCACCGATAAAATAATCACCAGCGGATGCAGGTTAACCGCTTCGGAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGTACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAA  >  CP009273/2607980‑2608456                                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                       ttCTGGCAGCTGGCGCACAGGAGCGCAGACAATGTTCCGGCACTGACGGTCAGCCATGTTATTACCGCCAATCTGCGCCCGGTGATGCTGGGTAATAGTATCGGCGGTGCGGTGCTGGTGAGGATGTGTTATCGGGCTATGTATTTACGTCAGGAACCCTGAAAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATTAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCg                                                                                                                                                                                                                <  1:148276/272‑1 (MQ=255)                                             ggcGGTCAGCCATTTTTTTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTGGTGAGTATGTGTTATCGGGCTATTTATTTACGTCAGGAACCCTGAAAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATC‑CCCACAAACCACCGAAGATCACCACCGa                                                                                                                                                                <  1:90785/273‑1 (MQ=255)                                              aCGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTGGTTAGTATGTGTTATCGGGCTATTTATTTACGTCAGGAACCCTGAAAAATCCGCCCGGCGACACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACTGCTTTGATTAGCGTCGCCAACCGAATGGCGACAGATACGCACCCGAATCACCCAC‑AACCACCAAAGACNaccccctc                                                                                                                                                                >  2:260659/1‑272 (MQ=255)                                                                                      tGCTGGGTAATATTATCGGCGGTGCGGTGCTGGTGAGTATGTGTTATCGGGCTATTTATTTACGTCAGGAACCCTGAAAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATC‑CCCACAAACCACCGAAGATCACCACCGATAAAATAATCACCAGCGAATGCAGGTTAAACGCTTCGgaga                                                                                                                       >  1:268963/1‑275 (MQ=255)                                                                                                                         tgtagttgtTATCGGGCTATTTATTTACGTCAGGAACCCTGAAAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATC‑CCCACAAACCACCGAAGATCACCACCGATAAAATAATCACCAGCGGATGCAGGTTAACCGCTTCGGAGAACAACACCGGCACTAACAGGTTGCCGTCCAgcgc                                                                                     <  1:260664/268‑1 (MQ=255)                                                                                                                           tATGTGTTATCGGGCTATTTATTTACGTCAGGAACCCTGAAAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATC‑CCCACAAACCACCGAAGATCaccacc                                                                                                                                                                  >  1:586160/1‑195 (MQ=255)                                                                                                                           tATGTGTTATCGGGCTATTTATTTACGTCAGGAACCCTGAAAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATC‑CCCACAAACCACCGAAGAACACCCCCGCAAAAAAAATCACAAACGGATGCAGGTTAAACGCCTCGGAAAAAAAAACCGCAACTAACAGGATGccagtcagcccct                                                                                   >  2:698300/1‑263 (MQ=255)                                                                                                                              gtgtTATCGTGCTATTTATTTACATCAGGAACCCTGAAAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATGCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATC‑CCCACAAACCACCGAAGATCACCACCGATAAAATAATCACCAGCGGATGCAGGTTAACCGCTTCGGAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGaa                                                                                <  1:698309/274‑1 (MQ=255)                                                                                                                               tgtTATCGGGCTATTTATTTACGTCAGGAACCCTGAAAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATC‑CCCACAAACCACCGAAGATCACCACCGATa                                                                                                                                                              <  2:586151/195‑1 (MQ=255)                                                                                                                                                      tCAGGAACCCTGAAAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCAGGAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATC‑CCCACAAACCACCGAAGATCACCACCGATAAAATAATCACCAGCGGATGCAGGTTAACCGCTTCGGAGAACAACACCGACACTAACAGGTTGCCGGCCAGCGCCGGAAAAATCAGATACACCTCGAagtcgcc                                                       >  2:34212/1‑270 (MQ=255)                                                                                                                                                               cTGAAAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATc                                                                                                                                                                                             >  2:155019/1‑133 (MQ=255)                                                                                                                                                                   aaaaTCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATC‑CCca                                                                                                                                                                                        <  1:155022/133‑1 (MQ=255)                                                                                                                                                                      caccagcccggaaaaccagattaacaaactgaaacaggcaatacctgccagattaccgcaggccaccagaagtgcgttaatcagccaagttcgccaacGGAATGGCGAAGAATACGCCCCAGAATC‑CCcac                                                                                                                                                                                       >  2:283351‑M2/99‑131 (MQ=255)                                                                                                                                                                        cAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATC‑CCCACAAacc                                                                                                                                                                                  >  2:594687/1‑134 (MQ=255)                                                                                                                                                                          agcccggaaaaccagattaacaaactgaaacaggcaatacctgccagattaccgcaggccaccagaagtgcgttaatcagccaagttcgccaacGGAATGGCGAAGAATACGCCCCAGAATC‑CCCACAAac                                                                                                                                                                                   <  1:283356‑M2/37‑1 (MQ=255)                                                                                                                                                                            ccGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATC‑CCCACAAACCACCg                                                                                                                                                                              <  1:594696/134‑1 (MQ=255)                                                                                                                                                                                                aactgaaacaggcaatacctgccagattaccgcaggccaccagaagtgcgttaatcagccaagttcgccaacGGAATGGCGAAGAATACGCCCCAGAATc‑cc                                                                                                                                                                                          >  1:254342‑M2/73‑102 (MQ=255)                                                                                                                                                                                                    gaaacaggcaatacctgccagattaccgcaggccaccagaagtgcgttaatcagccaagttcgccaacGGAATGGCGAAGAATACGCCCCAGAATC‑CCcaca                                                                                                                                                                                      <  2:254337‑M2/34‑1 (MQ=255)                                                                                                                                                                                                                                                 cGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATC‑CCCACAAACCACCGAAGATCACCACCGATAAAATAATCACCAGCgg                                                                                                                                              >  2:205985/1‑97 (MQ=255)                                                                                                                                                                                                                                                     tttGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATC‑CCCACAAACCACCGAAGATCACCACCGATAAAATAATCACCAGCGGATGc                                                                                                                                          <  1:205989/97‑1 (MQ=255)                                                                                                                                                                                                                                                     tttGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATC‑CCCACAAACCACCGAAGATCACCACCGATAAAATAATCACCAGCGGATGCAGGTTAACCGCTTCGGAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGTACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGaa  <  1:203905/233‑1 (MQ=255)                                                                                                                                                                                                                                                          tCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATC‑CCCACAAACCACCGAAGATCACCACCGATAAAATAATCACCAGCGGATGCAGGTTAACCGCTTCGGAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGaa                                                 <  1:127636/181‑1 (MQ=255)                                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                       TTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTGGTGAGTATGTGTTATCGGGCTATTTATTTACGTCAGGAACCCTGAAAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATC‑CCCACAAACCACCGAAGATCACCACCGATAAAATAATCACCAGCGGATGCAGGTTAACCGCTTCGGAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGTACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAA  >  CP009273/2607980‑2608456

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.