New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	2985582 =	39 (1.010)	4 (0.110)	4/298	NT	6.2%	coding (130/1377 nt)	ygeH	putative transcriptional regulator
	?	CP009273	2985987 =	83 (2.280)					coding (535/1377 nt)	ygeH	putative transcriptional regulator

GAAAGGTTATCGTTTCAGCGGGCAGGTTTTCAAAACTAAAATTAATGAAGATAATACTTCAGACTATTCCATAGCTATATTCCCTTTCACTACTTCATTGAATACACTGGATCCATTAATACTTAATCAGGAATTAGTGCAAATCATTTCAAATAAAAAAATCGATGGTCTCTATACCTATCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCAGTGAACACTTTATACATTGAGTTGATCGACGCTAAAAACCTTTTCCTCATCGCCAGTAATCATCTCCCTGTTGATGAACTACATAATACATCACAATTTATTATAGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTTAC  >  CP009273/2985740‑2986253                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                                           gAAAGGTTATCGTTTCAGCGGGCAGGTTTTCAAAACTAAAATTAATGAAGATAATACTTCAGACTATTCCATAGCTATATTCCCTTTCACTACTTCATTGAATACACTGGATCCATTAATACTTAATCAGGAATTAGTGCAAATCATTTCAAATAAAAAAATCGATGGTCTCTATACCTATCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATaa                                                                                                                                                                                                                                                 >  1:108550/1‑275 (MQ=255)              atccactttcAGTTTTTCAAAACTAAAATTAATGAAGATAATACTTCAGACTATTCCATAGCTATATTCCCTTTCACTACTTCATTGAATACACTGGATCCATTAATACTTAATCAGGAATTAGTGCAAATCATTTCAAATAAAAAAATCGATGGTCTCTATACCTATCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGc                                                                                                                                                                                                                                    <  2:108549/266‑1 (MQ=255)                                                          ttCAGACTATTCCATAGCTATATTCCCTTTCACTACTTCATTGAATACACTGGATCCATTAATACTTAATCAGGAATTAGTGCAAATCATTTCAAATAAAAAAATCGATGGTCTCTATACCTATCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTa                                                                                                                                                                                                                                                             >  2:402526/1‑206 (MQ=255)                                                              gACTATTCCATAGCTATATTCCCTTTCACTACTTCATTGAATACACTGGATCCATTAATACTTAATCAGGAATTAGTGCAAATCATTTCAAATAAAAAAATCGATGGTCTCTATACCTATCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCCGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGaataa                                                                                                                                                                                                                                       >  1:522815/1‑224 (MQ=255)                                                              gACTATTCCATAGCTATATTCCCTTTCACTACTTCATTGAATACACTGGATCCATTAATACTTAATCAGGAATTAGTGCAAATCATTTCAAATAAAAAAATCGATGGTCTCTATACCTATCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAgg                                                                                                                                                                                                                                                         <  1:402533/206‑1 (MQ=255)                                                               aCTATTCCATAGCTATATTCCCTTTCACTACTTCATTGAATACACTGGATCCATTAATACTTAATCAGGAATTAGTGCAAATCATTTCAAATAAAAAAATCGATGGTCTCTATACCTATCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAAt                                                                                                                                                                                                                                                   >  1:111859/1‑211 (MQ=255)                                                               aCTATTCCATAGCTATATTCCCTTTCACTAATTCATTGAATACACTGGATCCATTAATACTTAATCAGGAATTAGTGCAAATCATTTCAAATAAAAAAATCGATGGTCTCTATACCTATCCGATGACTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAACCAGATTATTTCAATACAGGAAGAATAAATCAGAATAATGCAGAGAACACTTAATAAATGAAGTATAACGACTCTAAAAACCtttttc                                                                                                                                                                                     >  2:569189/1‑271 (MQ=255)                                                                 tATTCCATAGCTTTATTTCTTTTTATTACTTCATTGTATACACTGGATCCATTAATACTTAATCATGAATTAGTGCAAATCATTTCAAATAAAAAAATCGATGGTCTCTATACCTATCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCAGTGAACACTTTATACATTGAGTTGATCGACGCTAAAAACCTTTTCCTCAt                                                                                                                                                                                 <  1:569198/275‑1 (MQ=255)                                                                  aTTCCATAGCTATATTCCCTTTCACTACTTCATTGAATACACTGGATCCATTAATACTTAATCAGGAATTAGTGCAAATCATTTCAAATAAAAAAATCGATGGTCTCTATACCTATCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCCGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCa                                                                                                                                                                                                                                   <  2:522808/224‑1 (MQ=255)                                                                   ttCCATAGCTATATTCCCTTTCACTACTTCATTGAATACACTGGATCCATTAATACTTAATCAGGAATTAGTGCAAATCATTTCAAATAAAAAAATCGATGGTCTCTATACCTATCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAAc                                                                                                                                                                                                                                               <  2:111858/211‑1 (MQ=255)                                                                         aGCTATATTCCCTTTCACTACTTCATTGAATACACTGGATCCATTAATACTTAATCAGGAATTAGTGCAAATCATTTCAAATAAAAAAATCGATGGTCTCTATACCTATCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCAGTGAACACTTTATACATTGAGTTGATCGACGCTAAAAACCTTTTCCTCATCGCCAGTa                                                                                                                                                                         >  1:367738/1‑275 (MQ=255)                                                                           cTATATTCCCTTTCACTACTTCATTGAATACACTGGATCCATTAATACTTAATCAGGAATTAGTGCAAATCATTTCAAATAAAAAAATCGATGGTCTCTATACCTATCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATg                                                                                                                                                                                                                                     >  2:319005/1‑213 (MQ=255)                                                                             atatTCCCTTTCACTACTTCATTGAATACACTGGATCCATTAATACTTAATCAGGAATTAGTGCAAATCATTTCAAATAAAAAAATCGATGGTCTCTATACCTATCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGgaagagt                                                                                                                                                                                                                                                   >  1:712494/1‑195 (MQ=255)                                                                               atTCCCTTTCACTACTTCATTGAATACACTGGATCCATTAATACTTAATCAGGAATTAGTGCAAATCATTTCAAATAAAAAAATCGATGGTCTCTATACCTATCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCAGt                                                                                                                                                                                                                                 <  1:319011/213‑1 (MQ=255)                                                                                aaaaaaagaaatactTAATTGAATAACCTGGTTCCATTAATACTTAATCAGGAATTAGTGCAAATCATTTCAAATAAAAAAATCGATGGTCTCTATACCTATCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCACAATAATGCAGTGAACACTTTATACATTGAGTTGATCGACGCTAAAAACCTTTTCCTCATCGCCAGTAATCAtct                                                                                                                                                                  <  2:655013/264‑1 (MQ=255)                                                                                 tCCCTTTCACTACTTCATTGAATACACTGGATCCATTAATACTTAATCAGGAATTAGTGCAAATCATTTCAAATAAAAAAATCGATGGTCTCTATACCTATCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAAc                                                                                                                                                                                                                                               <  2:712484/197‑1 (MQ=255)                                                                                             ctTCATTGAATACACTGGATCCATTAATACTTAATCAGGAATTAGTGCAAATCATTTCAAATAAAAAAATCGATGGTCTCTATACCTATCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGaata                                                                                                                                                                                                                                        >  2:11750/1‑192 (MQ=255)                                                                                             ctTCATTGAATACACTGGATCCATTAATACTTAATCAGGAATTAGTGCAAATCATTTCAAATAAAAAAATCGATGGTCTCTATACCTATCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCAGTGAACACTTTATACATTGAGTTGATCGACGCTAAAAACCTTTTCCTCATCGCCAGTAATCATCTCCCTGTtga                                                                                                                                                         >  1:647481/1‑271 (MQ=255)                                                                                             ctTCATTGAATACACTGGATCCATTAATACTTAATCAGGAATTAGTGCAAATCATTTCAAATAAAAAAATCGATGGTCTCTATACCTATCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCAGTGAACACTTTATACATTGAGTTGATCGACGCTAAAAACCTTTTCCTCATCGCCAGTAATCATCTCCCTGTTGATGaa                                                                                                                                                     <  2:647472/275‑1 (MQ=255)                                                                                                 aTTGAATACACTGGATCCATTAATACTTAATCAGGAATTAGTGCAAATCATTTCAAATAAAAAAATCGATGGTCTCTATACCTATCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGc                                                                                                                                                                                                                                    <  1:11750/192‑1 (MQ=255)                                                                                                   tGAATACACTGGATCCATTAATACTTAATCAGGAATTAGTGCAAATCATTTCAAATAAAAAAATCGATGGTCTCTATACCTATCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCTCGCCAGATTATNTCGTTACAGGAAGAATAAACCAGAATAATGCAGTGAACACTTTATACATTGAGTTGATCGACGCTAAAAACCTTTTCCTCATCGCCAGTAatc                                                                                                                                                                      >  1:655022/1‑252 (MQ=255)                                                                                                          acTGGATCCATTAATACTTAATCAGGAATTAGTGCAAATCATTTCAAATAAAAAAATCGATGGTCTCTATACCTATCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGACAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCAGTGAACACTTTATACATTGAGTTAATCGACACTAAAAACCTTTTCATCATCGCCAGTAATCATCTCCCTGTGGATGAACTCCaaaatcaa                                                                                                                                         >  2:717578/1‑271 (MQ=255)                                                                                                           cTGGATCCATTAATACTTAATCAGGAATTAGTGCAAATCATTTCAAATAAAAAAATCGATGGTCTCTATACCTATCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGaataa                                                                                                                                                                                                                                       >  1:412933/1‑179 (MQ=255)                                                                                                            tGGATCCATTAATACTTAATCAGGAATTAGTGCAAATCATTTCAAATAAAAAAATCGATGGTCTCTATACCTATCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCAGTGAACACTTTATACATTGAGTTGATCGACGCTAAAAAc                                                                                                                                                                                            >  2:642148/1‑221 (MQ=255)                                                                                                               aTCCATTAATACTTAATCAGGAATTAGTGCAAATCATTTCAAATAAAAAAATCGATGGTCTCTATACCTATCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCa                                                                                                                                                                                                                                   <  2:412926/179‑1 (MQ=255)                                                                                                                tCCATTAATACTTAATCAGGAATTAGTGCAAATCATTTCAAATAAAAAAATCGATGGTCTCTATACCTATCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCAGTGAACACTTTATACATTGAGTTGATCGACGCTAAAAACCttt                                                                                                                                                                                        <  1:642157/221‑1 (MQ=255)                                                                                                                        tACTTAATCAGGAATTAGTGCAAATCATTTCAAATAAAAAAATCGATGGTCTCTATACCTATCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCa                                                                                                                                                                                                                                   >  1:140777/1‑170 (MQ=255)                                                                                                                            tAATCAGGAATTAGTGCAAATCATTTCAAATAAAAAAATCGATGGTCTCTATACCTATCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCAGTGa                                                                                                                                                                                                                               <  2:140776/170‑1 (MQ=255)                                                                                                                             aaTCAGGAATTAGTGCAAATCATTTCAAATAAAAAAATCGATGGTCTCTATACCTATCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGat                                                                                                                                                                                                                                                                       >  1:208267/1‑129 (MQ=255)                                                                                                                             aaTCAGGAATTAGTGCAAATCATTTCAAATAAAAAAATCGATGGTCTCTATACCTATCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAAcc                                                                                                                                                                                                                                              >  2:595378/1‑154 (MQ=255)                                                                                                                             aaTCAGGAATTAGTGCAAATCATTTCAAATAAAAAAATCGATGGTCTCTATACCTATCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCAGTGAACACTTTATACATTGAGTTGATCGACGCTAAAAACCTTTTCCTCATCGCCAGTAATCATCTCCCTGTTGATGAACTACATAATACATCACAATTTATTATAGataa                                                                                                                     >  2:288987/1‑275 (MQ=255)                                                                                                                                 aGGAATTAGTGCAAATCATTTCAAATAAAAAAATCGATGGTCTCTATACCTATCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGattatt                                                                                                                                                                                                                                                                   <  2:208263/129‑1 (MQ=255)                                                                                                                                 aGGAATTAGTGCAAATCATTTCAAATAAAAAAATCGATGGTCTCTATACCTATCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGaa                                                                                                                                                                                                                                          <  1:595387/154‑1 (MQ=255)                                                                                                                                       tAGTGCAAATCATTTCAAATAAAAAAATCGATGGTCTCTATACCTATCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCAGTGAACACTTTATACATTGAGTTGATCGACGCTAAAAACCTTTTCCTCATCGCCAGTAATCATCTCCCTGTTGATGaa                                                                                                                                                     <  1:377987/233‑1 (MQ=255)                                                                                                                                          tGCAAATCATTTCAAATAAAAAAATCGATGGTCTCTATACCTATCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCAGTGAACACTTTATACATTGAGTTGATCGACGCTAAAAACCTTTTCCTCATCGCCAGTAATCATCTCCCTGTTGATGAACTACATAATACATCACAATTTATTATAGATAATATCCTTCAAACg                                                                                                        <  1:288992/275‑1 (MQ=255)                                                                                                                                              aaTCATTTCAAATAAAAAAATCGATGGTCTCTATACCTATCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGaataa                                                                                                                                                                                                                                       >  2:33810/1‑144 (MQ=255)                                                                                                                                                  aTTTCAAATAAAAAAATCGATGGTCTCTATACCTATCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCa                                                                                                                                                                                                                                   <  1:33810/144‑1 (MQ=255)                                                                                                                                                   tttCAAATAAAAAAATCGATGGTCTCTATACCTATCCGATGGCTGCGACAAATTTTTGTAATAATCACATATCTCAAAAGTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTAAAGGAAGAATAAACCAGAATAATGCAGTGAACACTTTATACATTGAGTTGATCGACGCTAAACACCTTTTCCTCAGCGCCAGTACTCATCTCCCTGTTGATGaa                                                                                                                                                     <  1:569162/221‑1 (MQ=255)                                                                                                                                                           aaaaaaaTCGATGGTCTCTATACCTATCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTAGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCAGTGAACACTTTATACATTGAGTTGATCGACGCTAAAAACCTTTTCCTCATCGCCAGTAATCATCTCCCTGTTGATGAACTACATAATACATCACAATTTATTATAGATAATATCCTTCAAACGGTACATCAACCAGAACg                                                                                       <  1:717588/275‑1 (MQ=255)                                                                                                                                                             aaaaaTCGATGGTCTCTATACCTATCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCa                                                                                                                                                                                                                                   >  1:325409/1‑133 (MQ=255)                                                                                                                                                                 agcGATGGTCTCTATACCTATCCGATGGCTGAGACAAAGTTTTGTAATGATCAAATATCTCGAAATTCATTCTTGAGGAGATTCAAGCCAGATTGTTTCGTTACAGGAAGAATAAGACGGAATAATGCAGTGa                                                                                                                                                                                                                               <  2:325403/131‑1 (MQ=255)                                                                                                                                                                                   tATCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCAGTGAACACTTTATACATTGAGTTGATCGACGCTAAAAACCTTTTCCTCATCGc                                                                                                                                                                              >  1:349221/1‑164 (MQ=255)                                                                                                                                                                                    aTCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCAGTGAACACTTTATACATTGAGTTg                                                                                                                                                                                                           >  1:303716/1‑134 (MQ=255)                                                                                                                                                                                    aTCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCAGTGAACACTTTATACATTGAGTTGATCGACGCTAAAAACCTTTTCCTCATCGCCAGTAATCATCTCCCTGTtga                                                                                                                                                         >  2:124622/1‑184 (MQ=255)                                                                                                                                                                                     tCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGga                                                                                                                                                                                                                                                        >  2:221177/1‑88 (MQ=255)                                                                                                                                                                                     tCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAAt                                                                                                                                                                                                                                                   >  2:287593/1‑93 (MQ=255)                                                                                                                                                                                     tCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGaa                                                                                                                                                                                                                                          >  1:153136/1‑102 (MQ=255)                                                                                                                                                                                     tCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGaa                                                                                                                                                                                                                                          >  1:51629/1‑102 (MQ=255)                                                                                                                                                                                     tCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCAg                                                                                                                                                                                                                                  >  1:705511/1‑110 (MQ=255)                                                                                                                                                                                     tCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCAGTGAACACTTTATACATTGAGTTGATCGACGCTAAAAACCTTTTCCTCATCGCCAGTAATCATCTCCCTGTtgatgacc                                                                                                                                                    >  2:227020/1‑186 (MQ=255)                                                                                                                                                                                       cGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTa                                                                                                                                                                                                                                                             >  2:364348/1‑81 (MQ=255)                                                                                                                                                                                       cGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCAGTGAACACTTTATACATTGAGTTGATCGACGCTAAAAACCTTTTCCTCATCGCCAGt                                                                                                                                                                          <  2:349215/164‑1 (MQ=255)                                                                                                                                                                                        gATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCAGTGAACACTTTATACATTGAGTTGATCg                                                                                                                                                                                                       <  2:303710/134‑1 (MQ=255)                                                                                                                                                                                        gATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCAGTGAACACTTTATACATTGAGTTGATCGACGCTAAAAACCTTTTCCTCATCGCCAGTAATCATCTCCCTGTTGATGaa                                                                                                                                                     <  1:124623/184‑1 (MQ=255)                                                                                                                                                                                         aTGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGgaagaa                                                                                                                                                                                                                                                    <  1:221182/88‑1 (MQ=255)                                                                                                                                                                                         aTGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGgaag                                                                                                                                                                                                                                                      >  2:120163/1‑86 (MQ=255)                                                                                                                                                                                         aTGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAAc                                                                                                                                                                                                                                               <  1:287598/93‑1 (MQ=255)                                                                                                                                                                                         aTGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGaataat                                                                                                                                                                                                                                      <  2:153133/102‑1 (MQ=255)                                                                                                                                                                                         aTGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGaataat                                                                                                                                                                                                                                      <  2:51629/102‑1 (MQ=255)                                                                                                                                                                                         aTGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCa                                                                                                                                                                                                                                   >  1:407286/1‑105 (MQ=255)                                                                                                                                                                                         aTGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCAGt                                                                                                                                                                                                                                 >  1:228937/1‑107 (MQ=255)                                                                                                                                                                                         aTGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCAGTGaa                                                                                                                                                                                                                              <  2:705501/110‑1 (MQ=255)                                                                                                                                                                                         aTGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCAGTGAACACTTTATACATTGAGTTGATCGACGCTAAAAACCTTTTCCTCATCGCCAGTAATCATCTCCCTGtt                                                                                                                                                           >  1:411265/1‑177 (MQ=255)                                                                                                                                                                                         aTGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCAGTGAACACTTTATACATTGAGTTGATCGACGCTAAAAACCTTTTCCTCATCGCCAGTAATCATCTCCCTGTTGATGAACTACa                                                                                                                                                <  1:227025/188‑1 (MQ=255)                                                                                                                                                                                           ggCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAgg                                                                                                                                                                                                                                                         <  1:364354/81‑1 (MQ=255)                                                                                                                                                                                             cTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATa                                                                                                                                                                                                                                                  <  1:120164/86‑1 (MQ=255)                                                                                                                                                                                             cTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCAGTGa                                                                                                                                                                                                                               <  2:407279/105‑1 (MQ=255)                                                                                                                                                                                             cTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCAGTGAac                                                                                                                                                                                                                             <  2:228932/107‑1 (MQ=255)                                                                                                                                                                                             cTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCAGTGAACACTTTATACATTGAGTTGATCGACGCTAAAAACCTTTTCCTCATCGCCAGTAATCATCTCCCTGTtgatg                                                                                                                                                       <  2:411258/177‑1 (MQ=255)                                                                                                                                                                                               gCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCGGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCa                                                                                                                                                                                                                                   >  2:326296/1‑99 (MQ=255)                                                                                                                                                                                                   cAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCGGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCAGTGa                                                                                                                                                                                                                               <  1:326302/99‑1 (MQ=255)                                                                                                                                                                                                     tactgattcgatgatcatatctttcagtacaacatgaccagcggattcaagCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCAGTGAACACTTTATACATTGAGTTGATCGACGCTAAAAACCTTTTcc                                                                                                                                                                                     >  2:590074‑M2/52‑139 (MQ=255)                                                                                                                                                                                                         gattcgatgatcatatctttcagtacaacatgaccagcggattcaagCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCAGTGAACACTTTATACATTGAGTTGATCGACGCTAAAAACCTTTTCCTCAt                                                                                                                                                                                 <  1:590083‑M2/92‑1 (MQ=255)                                                                                                                                                                                                               atgatcatatctttcagtacaacatgaccagcggattcaagCCAGATTATTTCGTTACAGGAAGAATAAACCAGaat                                                                                                                                                                                                                                         >  2:32850‑M2/42‑77 (MQ=255)                                                                                                                                                                                                                   tcatatctttcagtacaacatgaccagcggattcaagCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATg                                                                                                                                                                                                                                     <  1:32850‑M2/40‑1 (MQ=255)                                                                                                                                                                                                                             cAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCAg                                                                                                                                                                                                                                  >  1:459088/1‑70 (MQ=255)                                                                                                                                                                                                                              aaaaTTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCAGTGAACACTTTATACATTGAGTTGATCGACGCTAAAAACCTTTTCCTCa                                                                                                                                                                                  >  1:18715/1‑117 (MQ=255)                                                                                                                                                                                                                              aaaaTTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCAGTGAACACTTTATACATTGAGTTGATCGACGCTAAAAACCTTTTCCTCATCGCCAGTAATCATCTCCCTGtt                                                                                                                                                           >  2:472604/1‑140 (MQ=255)                                                                                                                                                                                                                                 attcattcTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCAGTGaa                                                                                                                                                                                                                              <  2:459081/70‑1 (MQ=255)                                                                                                                                                                                                                                  ttcattcTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCAGTGAACACTTTATACATTGAGTTGATCGACGCTAAAAACCTTTTCCTCATCGc                                                                                                                                                                              <  2:18715/117‑1 (MQ=255)                                                                                                                                                                                                                                  ttcattcTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCAGTGAACACTTTATACATTGAGTTGATCGACGCTAAAAACCTATTCCTCATCGCCAGTAATCATCTCCCTGTtgatg                                                                                                                                                       <  1:472611/140‑1 (MQ=255)                                                                                                                                                                                                                                    cattcTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCAGTGAACACTTTATACATTGAGTTGATCGACGCTAAAAACCTTTTCCTCATCGCCAGTAATCATCTCCCTGTTGATGAACTACataat                                                                                                                                            >  2:35396/1‑149 (MQ=255)                                                                                                                                                                                                                                     attcTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAAt                                                                                                                                                                                                                                                   >  2:44434/1‑45 (MQ=255)                                                                                                                                                                                                                                      tttttGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCAGTGAACACTTTATACATTGAGTTGATCGACGCTAAAAACC‑TTTCCTCATCGCCAGTAATCATCTCCCTGTTGATGAACTACATAATACATCACAATTTATTATAGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGAAGGACCAAGGAAATAAGAATCATTATTTATCAGATGAAATGTAATCCGgaaagaa            >  2:137319/4‑274 (MQ=255)                                                                                                                                                                                                                                        cTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCAGTGAACACTTTATACATTGAGTTGATCGACGCTAAAAACCTTTTCCTCATCGCCAGTAATCATCTCCCTGTTGATGAACTACATAATACAt                                                                                                                                        <  1:35396/149‑1 (MQ=255)                                                                                                                                                                                                                                         ttGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAAc                                                                                                                                                                                                                                               <  1:44434/45‑1 (MQ=255)                                                                                                                                                                                                                                          tGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCa                                                                                                                                                                                                                                   >  1:373247/1‑56 (MQ=255)                                                                                                                                                                                                                                              cAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCAGTGa                                                                                                                                                                                                                               <  2:373241/56‑1 (MQ=255)                                                                                                                                                                                                                                               aGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCAGTGAACACTTTATACATTGAGTTGATCGACGCTAAAAACC‑TTTCCTCATCGCCAGTAATCATCTCCCTGTTGATGAACTACATAATACATCACAATTTATTATAGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTTAc  <  1:137320/275‑1 (MQ=255)                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                                           GAAAGGTTATCGTTTCAGCGGGCAGGTTTTCAAAACTAAAATTAATGAAGATAATACTTCAGACTATTCCATAGCTATATTCCCTTTCACTACTTCATTGAATACACTGGATCCATTAATACTTAATCAGGAATTAGTGCAAATCATTTCAAATAAAAAAATCGATGGTCTCTATACCTATCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCAGTGAACACTTTATACATTGAGTTGATCGACGCTAAAAACCTTTTCCTCATCGCCAGTAATCATCTCCCTGTTGATGAACTACATAATACATCACAATTTATTATAGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTTAC  >  CP009273/2985740‑2986253

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.