New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 3299162	43 (1.120)	4 (0.110)	4/300	NT	7.5%	coding (15/1245 nt)	mtr	tryptophan transporter of high affinity
	?	CP009273	= 3299337	58 (1.580)					coding (1883/1890 nt)	deaD	ATP‑dependent RNA helicase

TAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACACGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGACGCGGAGCGCGGCCTTCACGACGTTCGCCGCTAAAACGACGACCATCACCACGGCCACCTTCACGGCGTTCACCGCTGAAGTTACGACCGCCTTCACGACGTTCGCCACCGAAACCACGACCACCGCCACGACGCTCACCGCCAGTATGCGGCTGTGCATCGCCCAGTAACTGCATGTTCATCGGCTTGTTGAGAATGCGAGTGCGCGTAAAGTGTTGCAGCACTTCA  >  CP009273/3299165‑3299603                                                                                                                                                                             |                                                                                                                                                                                                                                                                           catggttgccAATAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTTCGTTGTTATGCATTGCACTGTACCAGTACACGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATcaccacccaaacgtcaccgtcgctgcttggcggcgtggtgattatcggcggcaccattattggcgcagggatgttttctctgccagtggtcatgtccgggg                                                                                                                                                                       >  2:713546‑M2/5‑173 (MQ=255)  aGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACACGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCATCGAAACGACGACGACCGGTAGAATCATCACGACGCGGAGCGCGGCCTTCACGACGTTCGCCGCTAAAACGACAACCATCACCACGGCCACCTTccag                                                                                                                                                                     >  1:393403/1‑272 (MQ=255)         ccATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACACGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATcaccacccaaacgtcaccgtcgctgcttggcggcgtggtgattatcggcggcaccattattggcgcagggatgttttctctgccagtggtcatgtca                                                                                                                                                                           <  1:713556‑M2/262‑98 (MQ=255)              aGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACACGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGACGCGGAGCGCGGCCTTCACGACGTTCGCCGCTAAAAcgacga                                                                                                                                                                                            >  1:287487/1‑240 (MQ=255)                  cTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACACGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGACGCGGAGCGCGGCCTTCACGACGTTCGCCGCTAAAACGACGACCAt                                                                                                                                                                                        <  2:287482/240‑1 (MQ=255)                         ccAGTGAAAAATAGTGCGACTGCGTTGTTATTCATTGCACTGTACCAGTACACGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTGAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTGCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGACGCGGAGCGCGGCCTTCACGACGTTCGCCGCTAAAACGACGACCATCACCACGGCCACCTTCACGGCGTTCACCGCt                                                                                                                                                         <  1:394663/264‑1 (MQ=255)                           aGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACACGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGACGCGGAGCGCGGCCTTCACGACCTTCGCCGCTAAAACGACGACCAACACCACGGCAACCCTCACCGCGTTCACCGCGCACGCTACGAcc                                                                                                                                             >  2:653147/1‑274 (MQ=255)                             tGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACACGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGACGCGGAg                                                                                                                                                                                                                               >  2:157511/1‑190 (MQ=255)                                 aaaTAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACACGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGACGCGGAGcgcg                                                                                                                                                                                                                           <  1:157514/190‑1 (MQ=255)                                       tGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACACGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCCGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATcaccacccaaacgtcaccgtcgctgcttggcggcgtggtgattatcggcggcaccattattggcgcagggatgttttct                                                                                                                                                                                             <  2:584763‑M2/214‑80 (MQ=255)                                           aCTGCGTTGTTATGCATTGCACTGTACCAGTACACGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCCGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATcaccacccaaacgtcaccgtcgctgcttggcggcgtggtgattatcggcggcaccattattggcgcagggatgttttctctgc                                                                                                                                                                                         >  1:584772‑M2/1‑131 (MQ=255)                                                              cACTGTACCAGTACACGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGACGCGGAGCGCGGCCTTCACGACGTTCGCCGCTAAAACGACGACCATCACCACGGCCACCtt                                                                                                                                                                         >  1:74137/1‑211 (MQ=255)                                                                  gTACCATTACACGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGACGCGGAGCGCGGCCTTCACGACGTTCGCCGCTAAAACGACGACCATCACCACGGCCACCTTCACg                                                                                                                                                                     <  2:74136/211‑1 (MQ=255)                                                                   tACCAGTACACGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGACGCGGAGCGCGGCCTTCACGACGTTcgc                                                                                                                                                                                                          >  1:100637/1‑173 (MQ=255)                                                                       aGTACACGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGACGCGGAGCGCGGCCTTCACGACGTTCGCCGCt                                                                                                                                                                                                      <  2:100636/173‑1 (MQ=255)                                                                        gTACACGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGACGCGGAGCGCGGCCTTCACGACGTTCGCCGCTAAAACGACGACCATCACCACGGCCACCTTCACGGCGTTCACCGCTGAAGTTACGACCGCCtt                                                                                                                                        >  1:360138/1‑234 (MQ=255)                                                                           cacGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAac                                                                                                                                                                                                                                                                >  1:567139/1‑111 (MQ=255)                                                                            aagAGTAAAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGATGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGACGCGGAGCGCGGCCTTCCCGACGTTCGCCGCTAAAACGACGACCATCACCACGGCCACCTTCACGGCGTTCACCGCTGAAGTTACGACCGCCTTCacg                                                                                                                                    <  2:360132/232‑1 (MQ=255)                                                                             cGAGTACAAAAGACAGAAAGAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGACGCGGAGCGCGGCCCGCACGACGTTCGCCGCTAAAACGACGACCATCACCACGGCCACCTTCACGGCGTTCACCGCTGAAGTTACGACCGCCTTCACGACGTTCGCAACCGAAACCACGACCACCGCCACGACGCTGAc                                                                                           >  1:580537/1‑274 (MQ=255)                                                                             cGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGACGCGGAGCGCGGCCTTCACGACGTTCGCCGCTAAAACGACGACCATCACCACGGCCACCTTCACGGCGTTCACCGCTGAAGTTCCGACCGCCTTCACGACGTTCGCCACCGAAACCACGACCACCGCCACCACGccc                                                                                             >  1:331792/1‑270 (MQ=255)                                                                             cGAGTACAAAAGACAGAAAAAAAGCCACGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGACGCGGAGCGCGGCCTTCACGACGTTCGCCGCTAAAACGACGACCATCACCACGGCCACCTTCACGGCGTTCACCGCTGAAGTTACGACCGCCTTCACGACGTTCGCCACCGAAACCACGACCACCGCCACGACGCCCAcc                                                                                          >  1:270043/1‑275 (MQ=255)                                                                               aGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAacgacg                                                                                                                                                                                                                                                            <  2:567130/111‑1 (MQ=255)                                                                                 tACAAAAGACAGAAAAAAGGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCAt                                                                                                                                                                                                                                                                            <  1:620251/93‑1 (MQ=255)                                                                                 tACAAAAAACAGAAAACAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGACGCGGAGCGCGGCCTTCACGACGTTCGCCGCTAAAACGACGACCATCACCACGGCCACCTTCACGGCGTTCACCGCTGAAGTTACGACCGCCTTCACGACGtt                                                                                                                               <  2:488748/234‑1 (MQ=255)                                                                                                                      gggttgctatttattATTTGACAGTTTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGACGCGGAGCGCGGCCTGCACGACGTTCGCCGCTAAAACGACGACCATCACCACGGCCACCTTCACGGCGTTCACCGCTGAAGTTACGGCCGCCTTCACGACGTTCGCCACCGAAACCACGACCACCGCCACGACGCTCACCGTCAGTATGCGGCTGTGCATCGCCCAGTAACTGCATGTTCa                                                 <  1:202558/268‑1 (MQ=255)                                                                                                                       gggCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGACGCGGAGCGCGGCCTTCACGACGTTcgc                                                                                                                                                                                                          >  2:167809/1‑121 (MQ=255)                                                                                                                        ggCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGACGCgg                                                                                                                                                                                                                                 >  1:611094/1‑97 (MQ=255)                                                                                                                           tGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGACGCGGAGCGCGGCCTTCACGACGTTCGCCGCt                                                                                                                                                                                                      <  1:167812/121‑1 (MQ=255)                                                                                                                            gTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGACGCGGAgcg                                                                                                                                                                                                                             <  2:611085/97‑1 (MQ=255)                                                                                                                             tatataTTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAacg                                                                                                                                                                                                                                                               >  2:393834/1‑62 (MQ=255)                                                                                                                             tatataTTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGACGCGGAGCGCGGCCTTCACGACGTTCGCCGCTaaa                                                                                                                                                                                                   >  1:209288/1‑122 (MQ=255)                                                                                                                                 tattatTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAacgacga                                                                                                                                                                                                                                                           <  1:393841/62‑1 (MQ=255)                                                                                                                                 tattatTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGACGCGGAGCGCGGCCTTCACGACGTTCGCCGCTAAAacga                                                                                                                                                                                               <  2:209284/122‑1 (MQ=255)                                                                                                                                    tattTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCATCGAAACGACGACGACCGGTAGAATCATCACGACGCGGAGCGCGGCCTTCACGACGTTCGCCGCTAAAACGACGACCATCACCACGGCCACCTTCACGGCGTTCACCGCTGAAGTTACGACCGCCTTCACGACGTTCGCCACCGAAACGACGACCACCGCCACGACGCTCACCGCCAGTATGCGGCTGTGCATCCCCCAGTAACTGCATGTTCATCGGCTTGTTgcga                                   >  1:697472/1‑275 (MQ=255)                                                                                                                                    tattTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGACGCGGAGCGCGGCCTTCACGACGTTCGCCGCTAAAACGACGACCATCACCACGGCCACCTTCACGGCGTTCACCGCTGAAGTTACGACCGCCTTCACGACGTTCGCCACCGAAACCACGACCACCGCCACGACGCCCCCCGCCAGTATGCGGCTGTGCATCGCCCCGTAACTGCATGTTCATCGGCTTGTTgaaa                                   >  1:321054/1‑273 (MQ=255)                                                                                                                                       tttACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGACGCGGAGCGCGGCCTTCACGACGTTCGCCGCTAAAACGACGACCATCACCACGGCCACCTTCACGGCGTTCAc                                                                                                                                                             >  2:415230/1‑150 (MQ=255)                                                                                                                                       tttACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGACGCGGAGCGCGGCCTTCACGACGTTCGCCGCTAAAACGACGACCATCACCACGGCCACCTTCACGGCGTTCACCGCTGAAGTTa                                                                                                                                                  >  1:80978/1‑161 (MQ=255)                                                                                                                                       tttACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGACGCGGAGCGCGGCCTTCACGACGTTCGCCGCTAAAACGACGACCATCACCACGGCCACCTTCACGGCGTGCACCGCTGAAGTTACGACCGCCtt                                                                                                                                        >  1:663646/1‑171 (MQ=255)                                                                                                                                       tttACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGACGCGGAGCGCGGCCTTCACGACGTCAGCCGCTAACACGaccacc                                                                                                                                                                                          >  2:304504/1‑121 (MQ=255)                                                                                                                                       tttACAGATTGTGTTCGCTGTTCAGCGAGGCTTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGACGCGGAGCGCGGCCTTCACGACGTTCGCCGCTAAAACGACGACCATcacca                                                                                                                                                                                   >  1:501587/1‑128 (MQ=255)                                                                                                                                         tACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTCGAATCATCACGACGCGCAGCGCGGCCTTCACGACGTCCGCCTCTAAAACGAAGACCACCACCACATCCACCTTCCCGGCGTTCACCGCTGCAGTTACGACCCCCTTCACGACGTTCGCCACCTAAAACACCACCACCGCCAACACCCCCCACGCCACAACGCCGCACTGCATCGCCCAGCAACCGCACGGCCACCGGCtttctgacttgacg                              >  2:144698/1‑263 (MQ=255)                                                                                                                                         tACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGACGCGGAGCGCGGCCTTCACGACGTTCGCCGCTAAAACGACGACCATCACCACGGCCACCTTCACGGCGTTCACCGCTGAAGTTACGACCGCCTTCACGACGTTCGCCACCGAAACCACGACCACCGCCACGACGCTCACCGCCAGTATGCGGCTGTGCATCGCCCAGTCACTGCATGTTCATCCGCTAGTTGAGAATGCg                              >  1:644682/1‑275 (MQ=255)                                                                                                                                           cAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACTGAAACGACGACGACCGGTAGAATCATCACGACGCGGAGCGCGGCCTTCACGACGTTCGCCGCTAAAACGACGACCATCACCACGGCCACCTTCACGGCGTTCACCGCTGAAGTTACGACCGCCTTCACGACGTTCGCCACCGAAACCACGACCACCGCCACGACGCTCACCGc                                                                                        <  1:249372/215‑1 (MQ=255)                                                                                                                                           cAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATTACGACGCGGAGCGCGGCCTTCACGACGTTCGCCGCTAAAACGACGACCATCACCACGGCCACCTTCACGGCGTTCACCGCTGAAGTTACGACCGCCTTCACGACGTTCGCCACCGAAACCACGACCACCGCCACGACGCTCACCGCCAGTATGCGGCTGTGCATCGCCCAGTAACTGCATGTTCATCGGCttgtt                                       <  1:681121/264‑1 (MQ=255)                                                                                                                                           cAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGACGCGGAGCGCGGCCTTCACGACGTTCGCCGCTAAAACGACGACCATCACCACGGCCACCTTCACGGCGTTCACCGCt                                                                                                                                                         <  1:415237/150‑1 (MQ=255)                                                                                                                                           cAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGACGCGGAGCGCGGCCTTCACGACGTTCGCCGCTAAAACGACGACCATCACCACGGCCACCTTCACGGCGTTCACCGCTGAAGTTACGAc                                                                                                                                              <  2:80977/161‑1 (MQ=255)                                                                                                                                           cAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGACGCGGAGCGCGGCCTTCACGACGTTCGCCGCTAAAACGACGACCATCACCACGGCCACCTTCACGGCGTTCACCGCTGAAGTTACGACCGCCTTCacg                                                                                                                                    <  2:663637/171‑1 (MQ=255)                                                                                                                                           cAGATTGTGTTCGCTGTTCACCGCTGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGACGCGGAGCGCGGCCTTCACGACGTTCGCCGCTAAAACGACGACCATCACCACGGc                                                                                                                                                                               <  2:501580/128‑1 (MQ=255)                                                                                                                                           cAGATTGTGGTCGCTGGTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGACGCGGAGCGCGGCCTTCACGACGTTCGCCGCTAAAACGACGACCATca                                                                                                                                                                                      <  1:304510/121‑1 (MQ=255)                                                                                                                                            aGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGACGCGGAGCGCGGCCTTCACGACGTTCGCCGCTAAAACGACGACCATCACCACGGCCACCTTCACGGCGTTCACCGCTGAAGTTACGACCGCCTTCACGACGTTCGCCACCGAAACCACGCCCACCGCCCCGATCCCCACCGCCAGTATCCGGCTGTGCATCGCCCCGTAACTGCACGTTCATCGCCCTGTTGCGAATCCGatt                           >  2:674474/1‑273 (MQ=255)                                                                                                                                             gATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACNACGACCGGTAGAATCATCACGACGCGGAGCGCGGCCTTCACGACGTTCGCCGCTAAAACGACGACCATCACCACGGCCACCTTCACGGCGTTCACCGCTGAAGTTACGACCGCCTTCACGACGTTCGCCACCGAAACCACGACCACCGCCACGACGCt                                                                                              <  1:648075/207‑1 (MQ=255)                                                                                                                                              aTTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCgg                                                                                                                                                                                                                                                    >  1:103659/1‑56 (MQ=255)                                                                                                                                               ttGTGTTCGCTGTTCAGCGATGATTACGCACCACCACCGAACCGACGACGACCGGTAGAATCATCACGACGCGGAGCGCGGCCTTCACGACCTTCGCCGCTAAAACGACGACCATCNCCACGGCCACTATCACGGCGTTCACCGCTGAAGTTACGACCGCCTTCACGACGTTCGCCACCGAAACCACGACCACCGCCACGACGCTCACCGCCAGTATGCGGCTGTGCATCGCCCAGTAACTGCATGTTCATCGGCTTGTTGAGAATGCGAGTgcg                        <  1:653156/275‑1 (MQ=255)                                                                                                                                                 gtgtTCGCTGTTCAGCGAGGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGACGCGGAGCGCGGCCTTCACGACGTNCGCCGCTAAAACGACGACCATCACCACGGCCACCTTCACGGCGTTCACCGCTGAAGTTACGACCGCCTTCACGACGTTCGCCACCGAAACCACGACCACCGCCACGACGCTCACCGCCAGTATGCGGCTGTGCATCGCCCAGTAACTGCATGTTCATCGCCTTGTTGCGAATGCGAGTGcgcg                      <  1:510460/275‑1 (MQ=255)                                                                                                                                                  tgtTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGa                                                                                                                                                                                                                                                <  2:103658/56‑1 (MQ=255)                                                                                                                                                      ccctgtccacagatgatCACGCATCACCACCGAAACGACGACGACCGGTAGAATCACCACGACGCGGAGCGCGGCCTTCACGACGTTCGCCGCTAAAACGACGACCATCACCACGGCCACCTTCACGGCGTTCACCGCTGAAGTTACGACCGCCTTCACGACGTTCGCCACCGAAACCACGACCACCGCCACGACGCTCACCGCCAGTATGCGGCTGTGCATCGCCCAGTAACTGCATGTTCATCGGCTTGTTGAGAATGCGAGTGCGCGTAAAg                 <  2:321048/264‑1 (MQ=255)                                                                                                                                                      cGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGACGCGGAGCGCGGCCTTCACGACGTTCGCCGCTAAAACGACGACCATCACCACGGCCACCTTCACGGCGTTCACCGCTGAAGTTACGACCGCCTTCACGACGTTCGCCACCGAAACCACGACCACCGCCACGACGCTCACCGCCAGTATGCGGCTGTGCATCGCCCAGTAACTGCATGTTCATCGGCTTGTTGAGAATGCGAGTGCGCGTAAAg                 <  1:674483/275‑1 (MQ=255)                                                                                                                                                      cGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGAACGGTAGAAGCATCACGACGCGGAGCGCGGCCTTCACGACGTTCGCCGCTAAAACGACGACCATCACCACGGCCACCTTCACGGCGTTCACCGCTGAAGTTACGACCGCCTTCACGACGTTCGCCACCGAAACCACGACCACCGCCACGCCGCTCACCGCCAGTATGCGGCTGTGCAt                                                                      <  1:392345/222‑1 (MQ=255)                                                                                                                                                       gCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGACGCGGAGCGCGGCCTTCACGACGTTCGCCGCTAAAACGACGACCATCACCACGACCACCTTCACGGCGTTCACCGCTGAAGTTACGACCGCCTTCACGACGTTCGCCACCGAAACCACGACCACCGCCACGACGCTCACCGCCAGTATGCGGCTGTGCAt                                                                      <  1:77903/221‑1 (MQ=255)                                                                                                                                                          gTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGACGCGGAGCGCGGCCTTCACGACGTTCGCCGCTAAAACGACGACCATc                                                                                                                                                                                       >  1:648160/1‑105 (MQ=255)                                                                                                                                                             cAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCCTCCCGACGCGGAGCGCGGCCTTCACGACGTTCGCCGCTAAAACGACGACCATCACCACGGCCACCTTCACGGCGTTCACCGCTGAAGTTACGACCGCCTTCACGACGTTCGCCACCGAAACCACGACCACCGCCACGACGCTCACCGCCAGTATGCGGCTGTGCATCGCCCAGTAACTGCATGTTCATCGGCTTGTTGAGAATGCGAGTGCGCGTAAAGTGTTgca          <  1:144699/275‑1 (MQ=255)                                                                                                                                                              aGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGACGCGGAGCGCGGCCTTCACGACGTTCGCCGCTAAAACGACGACCATcacca                                                                                                                                                                                   <  2:648151/105‑1 (MQ=255)                                                                                                                                                                     atTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGACGCGGAGCGCGGCCTTCACGACGTTCGCCGCTAAAACGACGACCATCACCACGGCCACCTTCACGGCGTTCACCGCTGAAGTTACGACCGCCTTCACGACGTTCGCCACCGAAACCACGACCACCGCCACGACGCTCACCGCCAGTATGCGGCTGTGCATCGCCCAGTAACTGCATGTTCATCGGCTTGTTGAGAATGCGAGTGCGCGTAAAGTGTTGCCGCACtta   >  1:431268/1‑273 (MQ=255)                                                                                                                                                                     atTACGCATCACCACAGAAACGACGACGACCGGTAGAATCATCACGACGCGGAGCGCGGCCTTCACGACGTTCGCCGCTAAAACGACGACCATCACCACGGCCCCCTTCACGGCGTTCACCGCTGAAGTTACGACCGCCTTCACGACGTTCGCCACCGAAACCACGACCACCGCCACGACGCTCACCGCCAGTATGCGGCTGTGCATCGCCCAGTAACTGCATGTTCATCGGCTTGTTGAGAATGCGAGTGCGCGTAAAGTGTTGCAGCACTTCa  <  1:67295/275‑1 (MQ=255)                                                                                                                                                                             |                                                                                                                                                                                                                                                                           TAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACACGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGACGCGGAGCGCGGCCTTCACGACGTTCGCCGCTAAAACGACGACCATCACCACGGCCACCTTCACGGCGTTCACCGCTGAAGTTACGACCGCCTTCACGACGTTCGCCACCGAAACCACGACCACCGCCACGACGCTCACCGCCAGTATGCGGCTGTGCATCGCCCAGTAACTGCATGTTCATCGGCTTGTTGAGAATGCGAGTGCGCGTAAAGTGTTGCAGCACTTCA  >  CP009273/3299165‑3299603

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.