New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	3376205 =	21 (0.550)	4 (0.110)	4/298	NT	12.1%	coding (647/1068 nt)	degS	serine endoprotease, periplasmic
	?	CP009273	3376739 =	38 (1.040)					coding (889/939 nt)	mdh	malate dehydrogenase, NAD(P)‑binding

TGATTATTTCGGTGGATAACAAACCGGCCATCTCTGCTCTGGAGACGATGGATCAGGTGGCGGAAATTCGCCCTGGTTCGGTGATCCCTGTAGTAGTGATGCGTGATGATAAGCAGTTAACGCTGCAGGTCACCATTCAGGAATATCCGGCAACCAATTAAGTCGTGCGCTCAAAACAAAAAACCGGAGTCTGTGCTCCGGTTTTTTATTATCCGCTAATCAATTACTTATTAACGAACTCTTCGCCCAGGGCGATATCTTTCTTCAGCGTATCCAGCATACCTTCCAGCGCGTTCTGTTCAAATGCGCTCAGGGTACCGATAGATTTACGCTCTTCCACGCCGTTTTTACCCAGCAGCAGCGGTTGAGAGAAGAAACGGGCGTACTGACCGTCGCCTTCAACGTAGGCACATTCGACAACGCCTTGTTCGCCCTGCAGTGCACGAACCAGAGACAGACCAAAACGTGCAGCTGCCTGGCCCATAGACAGGGTTGCAGACCCGCCACCGGCCTTCGCTTCAACCACTTCAGTACCCGCGTTCTGGAT  >  CP009273/3376466‑3377012                                                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                                                  tGATTATTTCGGTGGATAACAAACCGGCCATCTCTGCTCTGGAGACGATGGATCAGGTGGCGGAAATTCGCCCTGGTTCGGTGATCCCTGTAGTAGTGATGCGTGATGATAAGCAGTTAACGCTGCAGTTCACCATTCAGGAATATCAGGCAACCAATTAAGTCGTGCGCTCAAAACAAAAAACCGGAGTCTGTGCTCCGGTTTTTTATTATCCGCTAATCAATTACTTATTAACGAACTCTTCGCCCAGGGCGATATCTTTCTTCAGCGTATc                                                                                                                                                                                                                                                                                   >  1:204178/1‑274 (MQ=255)      attTCGGTGGATAACAAACCGGCCATCTCTGCTCTGGAGACGATGGATCAGGTGGCGGAAATTCGCCCTGGTTCGGTGATCCCTGTAGTAGTGATGCGTGATGATAAGCAGTTAACGCTGCAGGTCACCATTCAGGAATATCCGGCAACCAATTAAGTCGTGCGCTCAAAACAAAAAACCGGAGTCTGTGCTCCGGTTTTTTATTATCCGCTAATCAATTACTTATTAACGAACTCTTCGCCCAGGGCGATATCTTTCTTCAGCGTATCCAGCa                                                                                                                                                                                                                                                                              >  1:21096/1‑274 (MQ=255)           agTGCATAACCAACCGGCCAGCGCTGCTCGGGGGACGATGGATCTGGTGGCGGAAATTCGTCCTGGTTCGGTGATCCCTGTAGTAGTGATGCGTGATGATAAGCAGGTAACGCTGCAGGTCACCATTCAGGAATATCCGGCAACCAATTAAGTCGTGCGCTCAAAACAAAAAACCGGAGTCTGTGCTCCGGTTTTTTATTATCCGCTAATCAATTACTTATTAACGAACTCTTCGCCCAGGGCGATATCTTTCTTCAGCGTATCCAGCATACCtt                                                                                                                                                                                                                                                                        <  2:21096/274‑1 (MQ=255)                                                               tcattaaccacgatcccttgcagttgatctataccaccgccctgcgcgtgcagtggtgcgatctcacgtccgccgataccaatgtagccgcggatcacgcgaccatcgcggatcagcttatccataattttggttgctaactggaaaggaatcgcaaagccgataccttccggcgtttcgccatcgttactcttatcaaacgacagcgtatCCAGCATACCTTCCAGCGCGTTCTGTTCAAATGCGCTCAGGGTACCGATAGATTTACGctct                                                                                                                                                                                                                      >  2:322127‑M2/212‑273 (MQ=255)                                                                                             gaagtGATGCGTGAGGATAAGCAGTTAACGCTGCAGGTCACCATTCCGGAATATTCGGCAATCAATTAAGTCGTGCGCTCAAAACAAAAAACCGGAGTCTGTGCTCCGGTTTGTTATTATCCGCTAATCAATTACTTATTAACGAACTCTTCGCCCAGGGCGATATCTTTCTTCAGCGTATCCAGCATACCTTCCAGCGCGTTCTGTTCAAATTCGCTCAGGGTACCGATAGATTTACGCTCTTCCACGCCG‑TTTTACCgagcaggaagtggctg                                                                                                                                                                                     <  2:215624/273‑11 (MQ=255)                                                                                                gtGATGCGTGATGATAAGCAGTTAACGCTGCAGGTCACCATTCAGGAATATCCGGCAACCAATTAAGTCGTGGGCTCAAAACAAAAAACCGGAGTCTGTGCTCCGGTTTTTTATTATCCGCTAATCAATTACTTATTAACGAACTCTTCGCCCAGGGCGATATCTTTCTTCAGCGTATCCAGCATACCTTCCAGCGCGTTCTGTTCAAATGCGCTCAGGGTACCGATAGATTTACGCTCTTc                                                                                                                                                                                                                    >  1:41400/1‑242 (MQ=255)                                                                                                gtGATGCGTGATGATAAGCAGTTAACGCTGCAGGTCACCATTCAGGAATATCCGGCAACCAATTAAGTCGTGCGCTCAAAACAAAAAACCGGAGTCTGTGCTCCGGTTTTTTATTATCCGCTAATCAATTACTTATTAACGAACTCTTCGCCCAGGGCGATATCTTTCTTCAGCGTATCCAGCATACCTTCCAGCGCGTTCTGTTc                                                                                                                                                                                                                                                        >  2:489228/1‑206 (MQ=255)                                                                                                   aTGCGTGATGATAAGCAGTTAACGCTGCAGGTCACCATTCAGGAATATCCGGCAACCAATTAAGTCGTGCGCTCAAAACAAAAAACCGGAGTCTGTGCTCCGGTTTTTTATTATCCGCTAATCAATTACTTATTAACGAACTCTTCGCCCAGGGCGATATCTTTCTTCAGCGTATCCAGCATACCTTCCAGCGCGTTCTGTTCAAATGCGCTCAGGGTACCGATAGATTTACGCTCTTCCACGCCGTTTTTACCCAGCAGCAGCGGTTgaga                                                                                                                                                                                   >  1:235889/1‑272 (MQ=255)                                                                                                   aTGCGTGATGATAAGCAGTTAACGCTGCAGGTCACCATTCAGGAATATCCGGCAACCAATTAAGTCGTGCGCTCAAAACAAAAAACCGGAGTCTGTGCTCCGGTTTTTTATTATCCGCTAATCAATTACTTATTAACGAACTCTTCGCCCAGGGCGATATCTTTCTTCAGCGTATCCAGCATACCTTCCAGCGCGTTCTGTTCAAATGCGCTCAGGGTACCGATAGATTTACGCTCTTCCACGCCGTTTTTACCCAGCAGCAGCGATTgaga                                                                                                                                                                                   >  1:112502/1‑272 (MQ=255)                                                                                                    tGCGTGATGATAAGCAGTTAACGCTGCAGGTCACCATTCAGGAATATCCGGCAACCAATTAAGTCGTGCGCTCAAAACAAAAAACCGGAGTCTGTGCTCCGGTTTTTTATTATCCGCTAATCAATTACTTATTAACGAACTCTTCGCCCAGGGCGATATCTTTCTTCAGCGTATCCAGCATACCTTCCAGAGCGTTCTGTTCAAAt                                                                                                                                                                                                                                                    <  1:489235/206‑1 (MQ=255)                                                                                                           tgatAAGAAGTTAACCCTGCAGGTAACCATTCAGGAATATCCGGCAACCAATTAAGTCGTGCGCTCAAAACAAAAAACCGGAGTCTGTGCTCCGGTTTTTTATTATCCGCTAATCAATTACTTATTAACGAACTCTTCGCCCAGGGCGATATCTTTCTTCAGCGTATCCAGCATACCTTCCAGCGCGTTCTGTTCAAATGCGCTCAGGGTACCGATAGATTTACGCTCTTCCACGCCGTTTTTACCCAGCAGCAGCGGTTGAGAGAAGAAACgg                                                                                                                                                                         <  2:235884/274‑1 (MQ=255)                                                                                                              gtgcagtggtgcgatctcacgtccgccgataccaatgtagccgcggatcacgcgaccatcgcggatcagcttatccataattttggttgctaactggaaaggaatcgcaaagccgataccttccggcgtttcgccatcgttactcttatcaaacgacagcgtatCCAGCATACCTTCCAGCGCGTTCTGTTCAAATGCGCTCAGGGTACCGATAGATTTACGCTCTTCCACGCCGTTTTTACCCAGCAGCAGCGGTTGAGAGAAGAAACGGGCGt                                                                                                                                                                     <  1:322133‑M2/111‑1 (MQ=255)                                                                                                                aGCAGTTAACGCTGCAGGTCACCATTCAGGAATATCCGGCAACCAATTAAGTCGTGCGCTCAAAACAAAAAACCGGAGTCTGTGCTCCGGTTTTTTATTATCCGCTAATCAATTACTTATTAACGAACTCTTCGCCCAGGGCGATATCTTTCTTCAGCGTATCAAGCATACCTTCCAGCGCGTTCTGTTCAAATGCGCTc                                                                                                                                                                                                                                              >  1:563775/1‑200 (MQ=255)                                                                                                                    gTTAACGCTGCAGGTCACCATTCAGGAATATCCGGCAACCAATTAAGTCGTGCGCTCAAAACAAAAAACCGGAGTCTGTGCTCCGGTTTTTTATTATCCGCTAATCAATTACTTATTAACGAACTCTTCGCCCAGGGCGATATCTTTCTTCAGCGTATCCAGCATACCTTCCAGCGCGTTCTGTTCAAATGCGCTCAggg                                                                                                                                                                                                                                          <  2:563766/200‑1 (MQ=255)                                                                                                                            tGCAGGTCACCATTCAGGAATATCCGGCAACCAATTAAGTCGTGCGCTCAAAACAAAAAACCGGAGTCTGTGCTCAGGTTTTTTATTATCCGCTAATCAATTACTTATTAACGAACTCTTCGCCCAGGGCGATATCTTTCTTCAGCGTATCCAGCATACCTTCCAGCACGTTTTGTTCAAATTCGCTCAGGATACCGATAGATTTACGCTCTTCCACGCCGTTTTTACCCAGCAGAAACGTTTGAGAGAAGAAACGGGCGAACtaccctaagcct                                                                                                                                                       >  1:89648/1‑264 (MQ=255)                                                                                                                             gCAGGTCACCATTCAGGAATATCCGGCAACCAATTAAGTCGTGCGCTCAAAACAAAAAACCGGAGTCTGTGCTCCGGTTTTTTATTATCCGCTAATCAATTACTTATTAACGAACTCTTCGCCCAGGGCGATATCTTTCTTCAGCGTATCCAGCATa                                                                                                                                                                                                                                                                            >  2:688944/1‑157 (MQ=255)                                                                                                                                 gTCACCATTCAGGAATATCCGGCAACCAATTAAGTCGTGCGCTCAAAACAAAAAACCGGAGTCTGTGCTCCGGTTTTTTATTATCCGCTAATCAATTACTTATTAACGAACTCTTCGCCCAGGGCGATATCTTTCTTCAGCGTATCCAGCATACCtt                                                                                                                                                                                                                                                                        <  1:688953/157‑1 (MQ=255)                                                                                                                                           aGGAATATCCGGCAACCAATTAAGTCGTGCGCTCAAAAC‑AAAAACCGGAGTCTGTGCTCCGGTTTTTTATTATCCGCTAATCAATTACTTATTAACGAACTCTTCGCCCAGGGCGATATCTTTCTTCAGCGTATCCAGCATACCTTCCAGCGCGTTCTGTTCAAATGCGCTCAGGGTACCGATAGATTTACGCTCTTCCACGCCGTTTTTACCCAGCAGCAGCGGTTGAGAGAAGAAACGGGCGTACTGACCGTCGCCTTCAACGAAGGCACAtt                                                                                                                                       >  1:264957/1‑275 (MQ=255)                                                                                                                                            ggAATATCCGGCAACCAATTAAGTCGTGCGCTCAAAACAAAAAACCGGAGTCTGTGCTCCGGTTTTTTATTATCCGCTAATCAATTACTTATTAACGAACTCTTCGCCCAGGGCGATATCTTTCTTCAGCGTATCCAGCATACCTTCCAGCGCGTGCTGTTCAAATGCGCTCAGGGTACCGATAGATTTACGCACtt                                                                                                                                                                                                                     >  2:48231/1‑197 (MQ=255)                                                                                                                                                tatCCGGCAACCAATTAAGTCGTGCGCTCAAAACAAAAAACCGGAGTCTGTGCTCCGGTTTTTTATTATCCGCTAATCAATTACTTATTAACGAACTCTTCGCCCAGGGCGATATCTTTCTTCAGCGTATCCAGCATACCTTCCAGCGCGTTCTGTTCAAATGCGCTCAGGGTACCGATAGATTTACGCACTTCCAc                                                                                                                                                                                                                 <  1:48231/197‑1 (MQ=255)                                                                                                                                                                     gTGCGCTCAAAACAAAAAACCGGAGTCTTTGCTCCGGTTTTTTATTATCCGCTAATCAATTACTTATTAACGAACTCTTCGCCCAGGGCGATATCTTTCTTCAGCGTATCCAGCATACCTTCCAGCGCGTTCTGTTCAAATGCGCTCAGGGTa                                                                                                                                                                                                                                        >  1:551885/1‑153 (MQ=255)                                                                                                                                                                       gcgcTCAAAACAAAAAACCGGAGTCTGTGCTCCGGTTTTTTATTATCCGCTAATCAATTACTTATTAACGAACTCTTCGCCCAGGGCGATATCTTTCTTCAGCGTATCCAGCATACCTTCCAGCGCGTTCTGTTCAAATGCGCTCAGGGTACCGATAGATTTACGCTCTTCCACGCCGTTTTTACCCAGCAGCAGCGGTTGAGAGAAGAAACGGGCGGACTGAc                                                                                                                                                               >  2:273972/1‑224 (MQ=255)                                                                                                                                                                         ggtgaaatctacaaaCCGGAGTCTGTGCTCCTGTTTTTTAGTAGCCGTGAATCCATTAGTTATTAAAGAACACTACGCACAGGGCGATATCTTTGTTCAGCGTATCCAGCATACCTTCGAGCGCGTGCTGTTCAAATGCGCGCAGGGTACGGATAGATTTACGCTCTTCAACGAAGTTTTTACCCAGCAGCGGCGGTTGAGAGAAGAAACGGGCGTACTTACCGTCGCCGTCAACGTAGGCACATTCTACAACGCCTTGTTCGCCCTGCAGTGCa                                                                                                          <  2:89647/263‑1 (MQ=255)                                                                                                                                                                         gcTCAAAACAAAAAACCGGAGTCTGTGCTCCGGTTTTTTATTATCCGCTAATCAATTACTTATTAACGAACTCTTCGCCCAGGGCGATATCTTTCTTCAGCGTATCCAGCATACCTTCCAGCGCGTTCTGTTCAAATGCGCTCAGGGTACCGa                                                                                                                                                                                                                                    <  2:551876/153‑1 (MQ=255)                                                                                                                                                                           tCAAAACAAAAAACCGGAGTCTGTGCTCCGGTTTTTTATTATCCGCTAATCAATTACTTATTAACGAACTCTTCGCCCAGGGCGATATCTTTCTTCAGCGTATCCAGCATACCTTCCAGCGCGTTCTGTTCAAATGCGCTCAGGGTACCGATAGATTTACGCTCTTCCACGCCGTTTTTACCCAGCAGCAGCGGTTGAGAGAAGAAACGGGCGTACTGACCGTc                                                                                                                                                           <  1:273977/224‑1 (MQ=255)                                                                                                                                                                                             attttggttgctaactggaaaggaatcgcaaagccgataccttccggcgtttcgccatcgttactcttatcaaacgacagcgtatCCAGCATACCTTCCAGCGCGTTCTGTTCAAATGCGCTCAGGGTACCGATAGATTTACGCTCTTCCACGCCGTTTTTACCCAGCAGCAGCGGTTGAGAGAAGAAACGGGCGTACTGACCGTCGCCTTCAACGTAGGCACATTCGACAACGcc                                                                                                                             >  1:336623‑M2/86‑236 (MQ=255)                                                                                                                                                                                                 tggttgctaactggaaaggaatcgcaaagccgataccttccggcgtttcgccatcgttactcttatcaaacgacagcgtatCCAGCATACCTTCCAGCGCGTTCTGTTCAAATGCGCTCAGGGTACCGATAGATTTACGCTCTTCCACGCCGTTTTTACCCAGCAGCAGCGGTTGAGAGAAGAAACGGGCGTACTGACCGTCGCCTTCAACGTAGGCACATTCGACAACGCCTTGt                                                                                                                         <  2:336617‑M2/155‑1 (MQ=255)                                                                                                                                                                                                    cTCCGGTTTTTTATTATCCGCTAATCAATTACTTATTAACGAACTCTTCGCCCAGGGCGATATCTTTCTTCAGCGTATCCAGCATACCTTCCAGCGCGTTCTGTTCAAATGCGCTCAGGGTACCGATAGATTTACGCTCTTCCACGCCGTTTTTACCCAGCAGCAGCGGTTGAGAGAAGAAACGGGCGTACTGACCGTCGCCTTCAACGTAGGCACATTCGACAACGCCTTGTTCGCCCTGCAGTGCACGAACCAGAGACAGACCAAAACGTGCa                                                                               <  1:373643/275‑1 (MQ=255)                                                                                                                                                                                                      ccGGTTTTTTATTATCCGCTAATCAATTACTTATTAACGAACTCTTCGCCCAGGGCGATATCTTTCTTCAGCGTATCCAGCATACCTTCCAGCGCGTTCTGTTCAAATGCGCTCAGGGTACCGATAGATTTACGCTCTTcc                                                                                                                                                                                                                   >  2:476197/1‑141 (MQ=255)                                                                                                                                                                                                      ccGGTTTTTTATTATCCGCTAATCAATTACTTATTAACGAACTCTTCGCCCAGGGCGATATCTTTCTTCAGCGTATCCAGCATACCTTCCAGCGCGTTCTGTTCAAATGCGCTCAGGGTACCGATAGATTTACGCTCTTCCACGCCGTTTTTACCCAGCAGCAGCGGTTGAGAGAAGAAACGGGCGTACTGACCGTCGCCTTCAACGTAGGcaca                                                                                                                                         >  1:383102/1‑215 (MQ=255)                                                                                                                                                                                                          ttttttATTATCCGCTAATCCATTANTTATTAACGAACTCTTCGCCCAGGGCGATATCTTTCTTCAGCGTATCCAGCATACCTTCCAGCGCGTTCTGTTCAAATGCGCTCAGGGTACCGATAGATTTACGCTCTTCCACGCCGTTTTTACCCAGCAGCAGCGGTTGAGAGAAGAAACGGGCGTACTGTCCGTCGCCTTCAACGTAGGca                                                                                                                                           <  1:501187/209‑1 (MQ=255)                                                                                                                                                                                                          ttttttATTATCCGCTAATCAATTACTTATTAACGAACTCTTCGCCCAGGGCGATATCTTTCTTCAGCGTATCCAGCATACCTTCCAGCGCGTTCTGTTCAAATGCTCTCAGGGTACCGATAGATTTACGCTCTTCCACGc                                                                                                                                                                                                               <  1:476204/141‑1 (MQ=255)                                                                                                                                                                                                          ttttttATTATCCGCTAATCAATTACTTATTAACGAACTCTTCGCCCAGGGCGATATCTTTCTTCAGCGTATCCAGCATACCTTCCAGCGCGTTCTGTTCAAATGCGCTCAGGGTACCGATAGATTTACGCTCTTCCACGCCGTTTTTACCCAGCAGCAGCGGTTGAGAGAAGAAACGGGCGTACTGACCGTCGCCTTCAACGTAGGCACATTCg                                                                                                                                     <  2:383096/215‑1 (MQ=255)                                                                                                                                                                                                            ttttATTTTCCTCTAATCAATTACTTATTAACGAACTCTTCGCCCAGGGCGATATCTTTCTTCAGCGTATCCAGCATACCTNCCAGCGCGNTCTGTTCAAATGTGCTCAGGGTACCGATAGATTTACGCTCTTCCACGCCGTTTTTACCCAGCAGCAGCGGTTGAGAGAAGAAACGGGCGTACTGACCGTCGCCTTCAACGTAGGCACATTCGACAACGCCTTGTTCGCCCTGCAGTGCTCGAACCAGAGACAGACCAAAACGTGCAGCTGCCt                                                                        <  1:470571/274‑1 (MQ=255)                                                                                                                                                                                                                                      attaACGAACTCTTCGCCCAGGGCGATATCTTTCTTCAGCGTATCCAGCATACCTTCCAGCGCGTTCTGTTCAAATg                                                                                                                                                                                                                                                   >  2:237684/1‑77 (MQ=255)                                                                                                                                                                                                                                        taACGAACTCTTCGCCCAGGGCGATATCTTTCTTCAGCGTATCCAGCATACCTTCCAGCGCGTTCTGTTCAAATGCGCTCAGGGTACCGATAGATTTACGCTCTTCCACGCCGTTTTTACCCAGCAGCAGCGGTTGAGAGAAGAAACGGGCGTACTGACCGTCGCCTTCAACg                                                                                                                                                 >  2:238632/1‑173 (MQ=255)                                                                                                                                                                                                                                          aCGAACTCTTCGCCCAGGGCGATATCTTTCTTCAGCGTATCCAGCATACCTTCCAGCGCGTTCTGTTCAAATGCGCt                                                                                                                                                                                                                                               <  1:237689/77‑1 (MQ=255)                                                                                                                                                                                                                                           ctccgtctTCGCACTGGGCCATATCTTTCTGCAGCGTATCCCGTATACCTTCCAGCGCGTTCTCTTCAAATGCGCTCAGGGTACCGATAGAGTTACGCTCTTCCCCGCCGTTTTTACCCAGCATCAGCGGTTGAGAGAAGAAACGGGCGTCCTGACCGTCGCCTTCAACGTAGGCACATTCGCCAACGCCTTGTTCGCCCTGCAGTGCACGAACCAGAGACAGACCAAAACGTGCAGCTGCCTGGCCCATAGACAGGGTTGCAGACCCGCCACCg                                        <  2:121919/270‑1 (MQ=255)                                                                                                                                                                                                                                            gAACTCTTCGCCCAGGGCGATATCTTTCTTCAGCGTATCCAGCATACCTTCCAGCGCGTTCTGTTCAAATGCGCTCAGGGTACCGATAGATTTACGCTCTTCCACGCCGTTTTTACCCAGCAGCAGCGGTTGAGAGAAGAAACGGGCGTACTGACCGTCGCCTTCAACGTAgg                                                                                                                                             <  1:238637/173‑1 (MQ=255)                                                                                                                                                                                                                                                    cGCCCAGGGCGATATCTTTCTTCGTCGTAGCCAGCATACCTTCCAGCGCGTTCTGTTCAAATGCGCTCAGGGTa                                                                                                                                                                                                                                        >  1:511717/1‑74 (MQ=255)                                                                                                                                                                                                                                                        cAGGGCGATATCTTTCTTCAGCGTATCCAGCATACCTTCCAGCGCGTTCTGTTCAAATGCGCTCAGGGTACCGa                                                                                                                                                                                                                                    <  2:511710/74‑1 (MQ=255)                                                                                                                                                                                                                                                          gggCGATATCTTTCTTCAGCGTATCCAGCATACCTTCCAGCGCGTTCTGTTCAAATgc                                                                                                                                                                                                                                                  >  1:579420/1‑58 (MQ=255)                                                                                                                                                                                                                                                              gATATCTTTCTTCAGCGTATCCAGCATACCTTCCAGCGCGTTCTGTTCAAATGCGCTc                                                                                                                                                                                                                                              <  2:579411/58‑1 (MQ=255)                                                                                                                                                                                                                                                                          cagcgtatCCAGCATACCTTCCAGCGCGTTCTGTTCAAATGCGCTCAGGGTACCGATAGATTTACGCTCTTCCACGCCGTTTTTACCCAGCAGCAGCGGTTGAGAGAAGAAACGGGCGTACTGACCGTCGCCTTCAACGTAGGCACATTCGACAACGCCTTGTTCGCCCTACAGTGCACGAACCAGAGACAGACCAAAACGTGCAGCTGCCTGGCCCATAGACAGGGTTGCAGACCCGcc                                            >  1:435182‑M2/9‑240 (MQ=255)                                                                                                                                                                                                                                                                                atCCAGCATACCTTCCAGCACGTTCTGTTCAAATGCGCTCAGGGTACCGATAGATTTACGCTCTTCCACGCCGTTTTTACCCAGCAGCAGCGGTTGAGAGAAGAAACGGGCGTACTGACCGTCGCCTTCAACGTAgg                                                                                                                                             >  1:583141‑M2/3‑137 (MQ=255)                                                                                                                                                                                                                                                                                 tCCAGCATACCTTCCAGCGCGTTCTGTTCAAATGCGCTCAGGGTACCGATAGATTTACGCTCTTCCACGCCGTTTTTACCCAGCAGCAGCGGTTGAGAGAAGAAACGGGCGTACTGACCGTCGCCTTCAACGTAGGCACATTCGACAACGCCTTGTTCGCCCTGCAGTGCACGAACCAGAGACAGACCAAAACGTGCAGCTGCCTGGCCCATAGACAGGGTTGCAGACCCGCCAACGGCCTCCGCTTCAACCACTTCAGTCCCCGNGTTCTGCAt  >  2:274956‑M2/2‑275 (MQ=255)                                                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                                                  TGATTATTTCGGTGGATAACAAACCGGCCATCTCTGCTCTGGAGACGATGGATCAGGTGGCGGAAATTCGCCCTGGTTCGGTGATCCCTGTAGTAGTGATGCGTGATGATAAGCAGTTAACGCTGCAGGTCACCATTCAGGAATATCCGGCAACCAATTAAGTCGTGCGCTCAAAACAAAAAACCGGAGTCTGTGCTCCGGTTTTTTATTATCCGCTAATCAATTACTTATTAACGAACTCTTCGCCCAGGGCGATATCTTTCTTCAGCGTATCCAGCATACCTTCCAGCGCGTTCTGTTCAAATGCGCTCAGGGTACCGATAGATTTACGCTCTTCCACGCCGTTTTTACCCAGCAGCAGCGGTTGAGAGAAGAAACGGGCGTACTGACCGTCGCCTTCAACGTAGGCACATTCGACAACGCCTTGTTCGCCCTGCAGTGCACGAACCAGAGACAGACCAAAACGTGCAGCTGCCTGGCCCATAGACAGGGTTGCAGACCCGCCACCGGCCTTCGCTTCAACCACTTCAGTACCCGCGTTCTGGAT  >  CP009273/3376466‑3377012

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.