New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	3618443 =	70 (1.820)	5 (0.140)	3/296	NT	7.4%	coding (706/1137 nt)	yhhI	putative transposase
	?	CP009273	3618699 =	60 (1.660)					coding (962/1137 nt)	yhhI	putative transposase

CACGGCAGAGAAGAAATCCGTCTTCATATTGTTTGCGATGTCCCTGATGAACTTATTGATTTCACGTTTGAATGGAAAGGGCTGAAGAAATTATGCGTGGCAGTCTCCTTTCGGTCCATAATAGCAGAACAAAAGAAAGAGCCAGAAATGACGGTCAGATATTATATCAGTTCTGCTGATTTAACCGCTGAGAAATTCGCCACAGCGATCCGAAATCACTGGCACGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATATTTTGACGAATGATAAGGTATTCAAGGCAGGGTTAAGACGTAAGATGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAT  >  CP009273/3618425‑3618949                                                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                           cACGGCAGAGAAGAAATCCGTCTTCATATTGTTTGCGATGTCCCTGATGAACTTATTGATTTCACGTTTGAATGGAAAGGGCTGAAGAAATTATGCGTGGCAGTCTCCTTTCGGTCCATAATAGCAGAACAAAAGAAAGAGCCAGAAATGACGGTCAGATATTATATCAGTTCTGCTGATTTAACCGCTGAGAAATTCGCCACAGCGATCCGAAATCACTGGCACGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAgacga                                                                                                                                                                                                                                                            >  2:158138/1‑275 (MQ=38)                               gTTTGCGATGTCCCTGATGAACTTATTGATTACACGTGTGAATGGAAAGGGCTGAAGAAATTATTCGTGGCAGTCTCCTTTCGGTCCATAATAGCAGCACAAAAGAAAGAGCCAGAAATGTCGGTCAGATATTATATCAGTTCTGCTGATTTAACCGCTGAGAAATTAGCAACAGCGCTCCGAAATCACTGGCACGTGGAGAAAAAGCAGCACTGGCGTCTGGACGTGGTAATGACTGAAGACGACTGCAAAATAAGAAAAGGAAATGAAGCAGa                                                                                                                                                                                                                              >  1:396721/1‑275 (MQ=11)                                          tccTGATGAAATTTTTGATTTCACGGTTGAATGGAAAGGGCTGAAGAAATTATGCGTGGCAGTCTCCTTTCGGTCCATAATAGCAGAACAAAAGAAATAGCCAGAAATGACGGTCAGATATTATATCAGTTCTGCAGATTTAACCGCTGAGAAATTCGCCACAGCGATCCGAAATCACTGGCACGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAg                                                                                                                                                                                                                   <  1:400293/274‑1 (MQ=255)                                                   aCTTATTGATTTCACGTTTGAATGGAAAGGGCTGAAGAAATTATGCGTGGCAGTCTCCTTTCGGTCCATAATAGCAGAACAAAAGAAAGAGCCAGAAATGACGGTCAGATATTATATCAGTTCTGCTGATATAACCGCTGAGAAATTCGCCACAGCGATCCGAAATCACTGGCACGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGTGATAggga                                                                                                                                                                                                          >  2:118345/1‑274 (MQ=255)                                                       aTTGATTTCACGTTTGAATGGAAAGGGCTGAAGAAATTATGCGTGGCAGTCTCCTTTCGGTCCATAATAGCAGAACAAAAGAAAGAGCCAGAAATGACGGTCAGATATTATATCAGTTCTGCTGATTTAACCGCTGAGAAATTCGCCACAGCGATCCGAAATCACTGGCACGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGcaca                                                                                                                                                                                                       <  2:83276/274‑1 (MQ=38)                                                        ttGGTTTCATGTTTGAATGGAAAGGGGTGAAGAAATTATTCGTGTCAGTCTCCTTTCGGTCAATAATAGAAGAACAAAATAAAGAGCCAGAAATGACGGTCAGATATTATATCAGTTCTGCTGATTTAACCGCTGAGAAATTCGCCACAGCGATCCGAAATCACTGGCACGTGGCGCATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACTGCACAt                                                                                                                                                                                                      <  2:718539/274‑1 (MQ=11)                                                               cACGTTTGAATGGAAAGGGCTGAAGAAATTATGCGTGGCAGTCTCCTTTCGGTCCATAATAGCAGAACAAAAGAAAGAGCCAGAAATGACGGTCAGATATTATATCAGTTCTGCTGATTTAACCGCTGAGAAATTCGACACAGCGATCCGAAATCACTGGCACGTGGAGAATAAGCTGCACTGCCGTATGGACGAGGTAATGAATGAAGACGACTGGAAAATAAAAAGAGGAAATGAAAAAGAATTATTTTCAAGGATACNGAAAATAGCTAt                                                                                                                                                                                                >  2:526148/1‑273 (MQ=11)                                                                         tGGAAAGGGCTGAAGAAATTATTCGTGGCAGTCTCCTTTCGGTCCATAATAGCAGAACAAAAGAAAGAGCCAGAAATGACGGTCAGATATTATATCAGTTCTGCTGATTTAACCGCTGAGAAATTCGCCACAGCGATCCGAAATCACTGGCACGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATATTTTGAc                                                                                                                                                                                    <  1:418292/275‑1 (MQ=38)                                                                          ggAAAAGGCTGAAGAAATTATGCGTGGCAGTCTCCTTTCGGTCCATAATAGCAGAACAAAAGAAAGAGCCAGAAATGACTGTCAGATATTATATCAGTTCTGCTGATTTAACCGCTGAGAAATTCGCCACAGCGATCCGAAATCACTGGCACGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATATTTTGACg                                                                                                                                                                                   <  1:694799/275‑1 (MQ=38)                                                                            aaaGGGCTGAAGAAATTATGCGTGGCAGTCTCCTTTCGGTCCATAATAGCAGAACAAAAGAAAGAGCCAGAAATGACGGTCAGATATTATATCAGTTCTGCTGATTTAACCGCTGAGAAATTCGCCACAGCGATCCGAAATCACTGGCACGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACt                                                                                                                                                                                                                                                          >  2:481399/1‑202 (MQ=255)                                                                                ggCTGAAGAAATTATGCGTGGCAGTCTCCTTTCGGTCCATAATAGCAGAACAAAAGAAAGAGCCAGAAATGACGGTCAGATATTATATCAGTTCTGCTGATTTAACCGCTGAGAAATTCGCCACAGCGATCCGAAATCACTGGCACGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCaa                                                                                                                                                                                                                                                      <  1:481406/202‑1 (MQ=40)                                                                                   aaaagaaATTAGGAAGGGCCTTCTCCTTTCGTGCGCAAATAGCAGGAAAAAAAAAAGAGCCAGAAATGACGGTGAAATATTATATCAGTTCGGCTGAGTTAACCGCTGAGAAATGCGCCACAGCCATCCGAAATCAATGGCACGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATATTTTGACGAATGATAAg                                                                                                                                                                          <  2:603569/273‑1 (MQ=11)                                                                                     aagagATTATGCGTGGCAGTCTCCTTTCCGTCCATAATAGCAGAACAAAAGAAAGAGCCAGAAATGACGGTCAGATATTATATCAGTTCTGCTGATTTAACCGCTGAGAAATTCGCCACAGCGATCCGAAATCACTGGCACGTGGAGAATAAGCTGCACTGGCATCTGGACGTGGTAATGAATNAAGACGACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATATTTTGACGAATGATAAGGt                                                                                                                                                                        >  1:561392/1‑275 (MQ=255)                                                                                               gagTGGCAGTCTCCTTTCGGTCCATAATAGCAGAACAAAAGAAAGAGCCAGAAATGACGGTCAGATATTATAGCAGTTCTGCTGATTTAACCGCTGAGAAATTCGCCACAGCGATCCGAAATAACGGGCACGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATATTTTGACGAATGATAAGGTATTCAAgg                                                                                                                                                                <  1:568635/271‑1 (MQ=255)                                                                                               gCGTGGCAGTCTTCTTTCGGTCCATAATAGCAGAACAAAAGAAAGAGCCAGAAATGACGGTCAGATATTATATCAGTTCTGCTGATTTAACCGCTGAGAAATTCGCCACAGCGATCCGAAAGCACTGGCACGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATATTTTGACGAATGATAAGGTATTCAAGGc                                                                                                                                                               <  1:56465/274‑1 (MQ=37)                                                                                                                               gAACAAAAGAAAGAGCCAGAAATGACGGTCAGATATTATATCAGTTCTGCTGATTTAACCGCTGAGAAATTCGCCACAGCGATCCGAAATCACTGGCACGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAAt                                                                                                                                                                                                                                                   >  2:30164/1‑158 (MQ=40)                                                                                                                                   aaaaGAAAGAGCCAGAAATGACGGTCAGATATTATATCAGTTCTGCTGATTTAACCGCTGAGAAATTCGCCACAGCGATCCGAAATCACTGGCACGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAATaaga                                                                                                                                                                                                                                               <  1:30164/158‑1 (MQ=40)                                                                                                                                     aagcaagaGCCAGAAATGACGGTCAGATATTATAACAGTTCTGCTGATTTAACCGCTGAGAAATTCGCCACAGCGATCCGAAATCACTGGCACGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATATTTTGACGAATGATAAGGTATTCAAGGCAGGGTTAAGACGTAAGAAGCGAAAAGCAGCCATGGACa                                                                                                                         >  1:63935/1‑274 (MQ=255)                                                                                                                                             gCCAGAAATGACGGTCAGATATTATATCAGTTCTGCTGATTTAACCGCTGAGAAATTCGCCACAGCGATCCGAAATCACTGGCACGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATAttt                                                                                                                                                                                        >  1:112061/1‑203 (MQ=40)                                                                                                                                                 gAAATGACGGTCAGATATTATATCAGTTCTGCTGATTTAACCGCTGAGAAATTCGCCACAGCGATCCGAAATCACTGGCACGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATATTTTGAc                                                                                                                                                                                    <  2:112060/203‑1 (MQ=38)                                                                                                                                                                     tatCAGTTCTGCTGATTTAACCGCTGAGAAATTCGCCACAGCGATCCGAAATCACTGGCACGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAATAAGAAGAGGAAATGCAGCAGAattat                                                                                                                                                                                                                         >  1:687731/1‑146 (MQ=255)                                                                                                                                                                        aggTTCTGCGGGTTTAACGGGGGGGAAAGTCGCGACAGCGATCCGAGATCACTGGCACGGGGAGAATAAGCTGCACTGTCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATATTTTGACGAATGATAAGGTATTCAAGGCAGGGTTAAGACGTAAGATGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCggg                                                                                      <  1:713411/272‑1 (MQ=11)                                                                                                                                                                         aGTTCTGCTGATTTAACCGCTGAGAAATTCGCCACAGCGATCCGAAATCACTGGCACGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAGAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATATTTTGACGAATGATAAGGTATTCAAGGCAGGGTTAAGACGTAAGATGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGc                                                                                     >  1:72799/1‑274 (MQ=38)                                                                                                                                                                         aGTTCTGCTGATTTAACCGCTGAGAAATTCGCCACAGCGATCCGAAATCACTGGCACGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAATaagaa                                                                                                                                                                                                                                              >  2:321177/1‑121 (MQ=255)                                                                                                                                                                         aGTTCTGCTGATTTAACCGCTGAGAAATTCGCCACAGCGATCCGAAATCACTGGCACGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAATAAGAAGAGGAAAt                                                                                                                                                                                                                                      >  2:93605/1‑129 (MQ=255)                                                                                                                                                                         aGTTCTGCTGATTTAACCGCTGAGAAATTCGCCACAGCGATCCGAAATCACTGGCACGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTc                                                                                                                                                                                                                     <  2:687722/146‑1 (MQ=255)                                                                                                                                                                          gTTCTGCTGATTTAACCGCTGAGAAATTTGCCACAGCGATCCGAAATCACTGGCACGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCGATTAATATTTTGACGAATGNTAAGGTATTCAAGGCAGGGTTAAGACGTAAGATGCGAAAAGCAGCAATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGca                                                                                    >  1:551804/1‑273 (MQ=255)                                                                                                                                                                          gTTCTGCTGATTTAACCGCTGAGAAATTCGCCACAGCGATCCGAAATCACTGGCACGTGGAGAATAAGCTGCACTGGCGTCTGAACGTGGTAATGAATGAAGACGACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATATTTTGACGAATGATAAGGTATTCaa                                                                                                                                                                  >  2:232980/1‑196 (MQ=38)                                                                                                                                                                            tCTGCTGATTTAACCGCTGAGAAATTCGCCACAGCGATCCGAAATCACTGGCACGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATAttt                                                                                                                                                                                        >  1:253625/1‑172 (MQ=39)                                                                                                                                                                             ctgctgATTTAACCGCTGAGAAATTCGCCACAGCGATCCGAAATCACTGGCACGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAAt                                                                                                                                                                                                                                                   >  1:552881/1‑112 (MQ=255)                                                                                                                                                                             ctgctgATTTAACCGCTGAGAAATTCGCCACAGCGATCCGAAATCACTGGCACGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAAt                                                                                                                                                                                                                                                   >  2:200839/1‑112 (MQ=255)                                                                                                                                                                             ctgctgATTTAACCGCTGAGAAATTCGCCACAGCGATCCGAAATCACTGGCACGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAATAAGAAGAgg                                                                                                                                                                                                                                          <  1:321183/121‑1 (MQ=255)                                                                                                                                                                             ctgctgATTTAACCGCTGAGAAATTCGCCACAGCGATCCGAAATCACTGGCACGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAATAAGAAGAGGAAATgcag                                                                                                                                                                                                                                  <  1:93606/129‑1 (MQ=255)                                                                                                                                                                             ctgctgATTTAACCGCTGAGAAATTCGCCACAGCGATCCGAAATCACTGGCACGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACgg                                                                                                                                                                                                           >  1:273109/1‑152 (MQ=40)                                                                                                                                                                              tgctgATTTAACCGCTGAGAAATTCGCCACAGCGATCCGAAATCACTGGCACGTGGAGAATAAGCTGCACTGGCGTCTGAACGTGGTAATGAATGAAGACGACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATATTTTGACGAATGATAAGGTATTCAAGGCa                                                                                                                                                              <  1:232985/196‑1 (MQ=38)                                                                                                                                                                               gctgATTTAATCGCTGAGAAATTCGTAACAGCGATCCGAATTCACTGGTACGTGGAGAATAAGATGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATATTTTGACGAATGCTAAGGTATTCAAGGAAGGGTTAAGACGTAAGATTAGAAAAGCAGCCATGGACAGAAACAATCTGACGACAGTCATTGGGGGGAGAGGGATTTCGTa                                                                              >  2:706679/1‑275 (MQ=11)                                                                                                                                                                                ctgATTTAACCGCTGAGAAATTCGCCACAGCGATCCGAAATCACTGGCACGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATATTTTGAc                                                                                                                                                                                    <  2:253620/172‑1 (MQ=39)                                                                                                                                                                                 tgATTTAACCGCTGAGAAATTCGCCACAGCGATCCGAAATCACTGGCACGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACt                                                                                                                                                                                                                                                          <  2:205742/101‑1 (MQ=255)                                                                                                                                                                                 tgATTTAACCGCTGAGAAATTCGCCACAGCGATCCGAAATCACTGGCACGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAATaaga                                                                                                                                                                                                                                               <  1:200842/112‑1 (MQ=255)                                                                                                                                                                                 tgATTTAACCGCTGAGAAATTCGCCACAGCGATCCGAAATCACTGGCACGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAATaaga                                                                                                                                                                                                                                               <  2:552872/112‑1 (MQ=255)                                                                                                                                                                                 tgATTTAACCGCTGAGAAATTCGCCACAGCGATCCGAAATCACTGGCACGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGcaca                                                                                                                                                                                                       <  2:273104/152‑1 (MQ=40)                                                                                                                                                                                   aTTTAACCGCTGAGAAATTCGCCACAGCGATCCGAAATCACTGGCACGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATATTTTGACGAATGATAATGTATTCAAAGCAGGGTTAAGACGTAAGATGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGGAATCt                                                                          >  1:257895/1‑275 (MQ=255)                                                                                                                                                                                     ttAACCGCTGAGAAATTCGCCACAGCGATCCGAAATCACTGGCACGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAATAAGAAGAGGCAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATATTTTGACGAATGATAAGGTATTCAAGGCAGGGTTAAGACGTACGATGCGAAAAGCAGCCATGGACAGAAACCATCTGGCGCCAGTCCTCGCGGGCAGCGGGcctccacaccccc                                                                         >  2:713401/1‑262 (MQ=11)                                                                                                                                                                                      aaaggagactgccacgcataatttcttcagccctttccattcaaacgtgaaatcaataagttcatcagggacatcgcaaacaatatgaagacgACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATAttt                                                                                                                                                                                        >  2:154516‑M2/94‑162 (MQ=255)                                                                                                                                                                                      aaaggagactgccacgcataatttcttcagccctttccattcaaacgtgaaatcaataagttcatcagggacatcgcaaacaatatgaagacgACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATAttt                                                                                                                                                                                        >  2:21780‑M2/94‑162 (MQ=255)                                                                                                                                                                                          gagactgccacgcataatttcttcagccctttccattcaaacgtgaaatcaataagttcatcagggacatcgcaaacaatatgaagacgACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATATTTTGAc                                                                                                                                                                                    <  1:154519‑M2/73‑1 (MQ=255)                                                                                                                                                                                          gagactgccacgcataatttcttcagccctttccattcaaacgtgaaatcaataagttcatcagggacatcgcaaacaatatgaagacgACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATATTTTGAc                                                                                                                                                                                    <  1:21780‑M2/73‑1 (MQ=255)                                                                                                                                                                                          cGCTGAGAAATTCGCCACAGCGATCCGAAATCACTGGCACGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAGAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATATTTTGACGAATGATAAGGTATTCAAGGCAGGGTTAAGACGTAAGATGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGcc                                                                      <  2:72798/272‑1 (MQ=38)                                                                                                                                                                                          cGCTGAGAAATTCGCCACAGCGATCCGAAATCACTGGCACGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATATTTTGACGAATGATAAGGTATTCAAGGCAGGGTTAAGACGTAAGATGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGcc                                                                      <  1:158141/272‑1 (MQ=38)                                                                                                                                                                                          cGCTGAGAAATTCGCCACAGCGATCCGAAATCACTGGCACGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATCAATGAAGACGACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACTGCACATTGCTATTAATATTTTGACGAATGATAAGGTATTCAAGGCAGGGTTAAGACGTAAGATGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTCATCTTGCCCt                                                                    <  1:706689/274‑1 (MQ=255)                                                                                                                                                                                             tGAGAAATTCGCCACAGCGATCCGAAATCACTGGCACGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATGAATATTTTGACGAATGATAAGGTATTCAAGGAAGGGTTAAGACGTAAGATGCGAAAAGCAGACATGGACAGAAACTATCTGGCGTCAGGCCTTGCGGGGATCGGGCTTGCGTAATCTGTCCCTGatg                                                                >  2:16007/1‑273 (MQ=255)                                                                                                                                                                                                         cacaGAGATCAGAAATCACCGGCACGTGGAGAATAAGCTTCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGATATTAATATTTTGACGAATGATAAGGTATTCAAGGCAGGGTTAAGACGTAAGATGCGAAAAGCAGCCATGGACAGAAACTATCTGGCTTCAGTCCTTGCGGGGAGAGGGCTCACGTAATCTTGCTCGGCATACAGGCATGAGt                                                    >  2:303684/1‑275 (MQ=11)                                                                                                                                                                                                              cGATCCGAAATCACTGGCACGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATATTTTGACGAATGATAAGGTATTCAAGGCAGGGTTAAGACGTAAGATGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCgg                                                                                              >  2:46871/1‑228 (MQ=37)                                                                                                                                                                                                                  ccGAAATCACTGGCACGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATATTTTGACGAATGATAAGGTATTCAAGGCAGGGTTAAGACGTAAGATGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAg                                                                                          <  1:46871/228‑1 (MQ=35)                                                                                                                                                                                                                      aaTCACTGGCACGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATATTTTGACGAAt                                                                                                                                                                                >  2:100825/1‑138 (MQ=34)                                                                                                                                                                                                                          aCTGGCACGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATATTTTGACGAATGATa                                                                                                                                                                            <  1:100826/138‑1 (MQ=32)                                                                                                                                                                                                                            tGGCACGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTAttt                                                                                                                                                                                                                       >  1:432054/1‑93 (MQ=33)                                                                                                                                                                                                                                aaatGGTGAATAAGATGCGCTGGGGTTTGGTCGTGGTAATGAATTAAGATGACTGAAAAATAAAAAGAGCAAATGGACCAGAATTAGTTTCAGCGTTACGGCACATTGCTATTATTTTTTGGACGAATGCTAAGGTATTCAAGGCAGGGTTAAGACGTAAGATGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACCGAGTATCAAAAAGCCGGTTAACTGaaa                             <  2:488695/272‑1 (MQ=14)                                                                                                                                                                                                                                aCGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAg                                                                                                                                                                                                                   <  2:432047/93‑1 (MQ=32)                                                                                                                                                                                                                                         aTAAGCTTCACTGGCGTCTGGAAGTTGTAATTAATGAAGACGAATGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGNCACATTGCTATTAATATTTTGACGAATGATAAGGTATTCAAGGCAGGGTTAAGCCGTAAGATGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCCAAAAGCCGGTTTACTGAAACTGTCCAgg                    <  1:526155/275‑1 (MQ=255)                                                                                                                                                                                                                                                    tGGGGTCTGGACGTGGTAATGAATGAAGAAGACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATATTTTGACGAATGATAAGGTATTCAAGGCAGGGTTAAGACGTAAGATGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGt          <  1:16007/274‑1 (MQ=255)                                                                                                                                                                                                                                                    tGGCGTCTGGACGTGGTAATGAATTAAGACGACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATATTTTGACGAATGATAAGGTATTCAAGGCAGGGTTAAGACGTAAGATGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGt          <  1:415444/274‑1 (MQ=255)                                                                                                                                                                                                                                                    tGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATATTTTGACGAATGATAAGGTATTCAAGGCAGGGTTAAGACGTAAGATGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTAAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCGGAATACAGGACTGAGTATCAAAAAGCCGGGTAACCGAAACTGTCCAAGATTGGGGGGTc         >  2:36513/1‑275 (MQ=255)                                                                                                                                                                                                                                                      gCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATATTTTGACGAATGATAAGGTATTCAAGGCAGGGTTAAGACGTAAGATGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAg                                           >  2:290526/1‑239 (MQ=255)                                                                                                                                                                                                                                                          gtGGACGTGGAAATGAATGGAGACGACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTGTCAGGGATACGGCACATGGCTATTAATATTTTGACGAATGATAAGGTATTAAAGGCAGGGTTAAGACGTAAGATGCGAAAAGCAGCCATGGACAGAAACTAGCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGGATCAAAAAGCCGGGTAACTGAAACTGTACAGGTTTTgggccggataagg   <  1:303690/274‑11 (MQ=17)                                                                                                                                                                                                                                                          cTGGACGTGGTAATGAATGAAGACGACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATATTTTGACGAATGATAAGGTATTCAAGGCAGGGTTAAGACGTAAGATGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCgg                                       <  1:290532/239‑1 (MQ=255)                                                                                                                                                                                                                                                           tGGACGTGGTAATGAATGAAGACGACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATATTTTGACGAATGATAAGGTATTCAAGGCAGGGTTAAGACGTAAGATGCGAAAAGCAGCCATGTACAGAAACTATCTGGCGACAGTCCTTGTGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGCATCAAAAAGCAGGTTAACTGAAAATGTCCAGGTTTTGGGGGTCAGTTCaa  >  2:677482/1‑274 (MQ=255)                                                                                                                                                                                                                                                                    aacaatatgaagacgACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATAttt                                                                                                                                                                                        >  2:722612‑M2/16‑84 (MQ=255)                                                                                                                                                                                                                                                                        atatgaagacgACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTCATATTTTGAc                                                                                                                                                                                    <  1:722622‑M2/73‑1 (MQ=255)                                                                                                                                                                                                                                                                           tgaagacgACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATATTTTGACGAATGATAAGGTATTCAAGGCAGGGTTAAGACGTAAGATGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCggg                                                                                      >  2:333225‑M2/9‑175 (MQ=255)                                                                                                                                                                                                                                                                            gaagacgACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTAttt                                                                                                                                                                                                                       >  1:1602‑M2/8‑45 (MQ=255)                                                                                                                                                                                                                                                                            gaagacgACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATAtttt                                                                                                                                                                                       >  1:6783‑M2/8‑77 (MQ=255)                                                                                                                                                                                                                                                                             aagacgACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAg                                                                                                                                                                                                                   >  1:624876‑M2/7‑48 (MQ=255)                                                                                                                                                                                                                                                                             aagacgACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATATTTTGACGAATGATAAg                                                                                                                                                                          <  1:582783‑M2/83‑1 (MQ=255)                                                                                                                                                                                                                                                                              agacgACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATATTTTGACGAATGATAAGGTATTc                                                                                                                                                                    >  2:279725‑M2/6‑94 (MQ=255)                                                                                                                                                                                                                                                                              agacgACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATATTTTGACGAATGATAAGGTATTCAAGGCAGGGTTAAGACGTAAGATGCGAAAAGCAGCCa                                                                                                                               >  1:695493‑M2/6‑131 (MQ=255)                                                                                                                                                                                                                                                                               gacgACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATATTTTGACGAATGATAAGGTATTCAAGGCAGGGTTAAGACGTAAGATGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCttt                                                                                  <  1:333231‑M2/171‑1 (MQ=255)                                                                                                                                                                                                                                                                                acgACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTcat                                                                                                                                                                                                                   <  2:1602‑M2/42‑2 (MQ=255)                                                                                                                                                                                                                                                                                acgACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATATTTTGACg                                                                                                                                                                                   <  2:6783‑M2/74‑1 (MQ=255)                                                                                                                                                                                                                                                                                 cgACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGAt                                                                                                                                                                                                               <  2:624867‑M2/46‑1 (MQ=255)                                                                                                                                                                                                                                                                                  gACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATATTTTGACGAATGATAAGGTATTCAAgg                                                                                                                                                                <  1:279730‑M2/93‑1 (MQ=255)                                                                                                                                                                                                                                                                                  gACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATATTTTGACGAATGATAAGGTATTCAAGGCAGGGTTAAGACGTAAGATGCGAAAAGCAGCCATGGa                                                                                                                           <  2:695484‑M2/130‑1 (MQ=255)                                                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                           CACGGCAGAGAAGAAATCCGTCTTCATATTGTTTGCGATGTCCCTGATGAACTTATTGATTTCACGTTTGAATGGAAAGGGCTGAAGAAATTATGCGTGGCAGTCTCCTTTCGGTCCATAATAGCAGAACAAAAGAAAGAGCCAGAAATGACGGTCAGATATTATATCAGTTCTGCTGATTTAACCGCTGAGAAATTCGCCACAGCGATCCGAAATCACTGGCACGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATATTTTGACGAATGATAAGGTATTCAAGGCAGGGTTAAGACGTAAGATGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAT  >  CP009273/3618425‑3618949

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.