New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 3629398	79 (2.060)	6 (0.160)	6/302	NT	9.3%	intergenic (+145/+170)	yhiM/yhiN	acid resistance protein, inner membrane/putative oxidoreductase
	?	CP009273	= 3629559	41 (1.110)					intergenic (+306/+9)	yhiM/yhiN	acid resistance protein, inner membrane/putative oxidoreductase

GCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTGTTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATCACAAGATAACCACTATCAAAATTAGCTCATTTTTAATGCGACTCTAATAATTTTCATCTTTAGGAAATAGGTCAGGACGACTTTGCTGCAATCAAATCCTGCGCACAAGCCCACGCACTCGACCACGCCCACTGGAAGTTATAGCCCCCCAGCCAGCCGGTGACGTCCATCACTTCGCCGATGAAGTACAGCCCAGGCACTTTGCGCGCTTCCATCGTCCGTGAAGAGAGTTCGTTGGTGTCCACGCCGCCGAGCGTCACTTCGGCAGTGCGATAGCCTTCAGTGCCGTTGGGTTGTACGCGCCAGTCGGTCAATGTGCTAAT  >  CP009273/3629290‑3629819                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                     ggtcaacgctGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTGTTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGACAATAATCACAAGATAACCACTATCAAAATTAGCTCATTTTTAATGCGACTATAATAATTTTCATCTTTAGaaaat                                                                                                                                                                                                                                                                 <  1:338335‑M2/271‑6 (MQ=255)      aCGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTGTTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCCGTTCACGNGCTCATTAGAAAATACTCACAAGATAAACACTATCAAAATTAACTCATTTTTAATGCGACTCTAATAATTTTCATCTTTAGGAAATAg                                                                                                                                                                                                                                                               >  1:565824/1‑272 (MQ=255)                  tttACGCATCTTGTAATAACGCAGCTTTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTGTTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATCACAAGATAACCACTATCAAAATTAGCTCATTTTTAATGCGACTCTAATAATTTTCATCTTTAGGAAATAGGTCAGGACGACTTtg                                                                                                                                                                                                                                                <  2:43733/274‑1 (MQ=255)                       cataaatGAAATCAAGAAGTAGTACTGCATAGTGTTTAAGTATAAAAAACAGCAAAGTTACTGTTTTTTTCAACCTGTTCATATTTCATAAATATCTTGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTAGATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATCACAAGATAACCACTATCAAAATTAGCTCATTTTTAATGCGACTCTAATAATTTTCATCTTTAGTAAATAGGTCAGGACGACTTtgctg                                                                                                                                                                                                                                             <  2:565815/268‑1 (MQ=255)                                      gcagcaTTAATGCATAGTGGTTAAGTATAAAAAACAGCCAAGTTACTGTTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATCACAAGATAACCACTATCAAAATTAGCTCATTTTTAATGCGACTCTAATAATTTTCATCTTTAGGAAATAGGTCAGGACGACTTTGCTGCAATCAAATCCTgcgc                                                                                                                                                                                                                             <  1:160307/274‑1 (MQ=255)                                                    tAGTGGTTAAGTATAAAAAACAGCAAAGTTACTGTTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCCCCTTTCCATCCACCTTATATTAAGCAGGGAGGGTTTCAGTTCACGGGCTCATTGGAAACGAATCACACGATAACGACTATCCAAATTAGCTCATTTTTAATTCTACCCTAATAATTTTCATCTTTAGGAAATAGATAAGGAAAGCTTTGCTGGAATCAAATCCTGCGcaccattccccccc                                                                                                                                                                                                                >  2:590265/1‑262 (MQ=255)                                                         gTTAAGTATAAAAAACAGCAAAGTTACTGTTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATCACAAGATAACCACTATCAAAATTAGCTCATTTTTAATGCGACTCTAATAATTTTCATCTTTAGgaa                                                                                                                                                                                                                                                                   <  2:655827‑M2/217‑4 (MQ=255)                                                             aGTATAAAAAACAGCAAAGTTACTGTTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATCACAAGATAACCACTATCAAAATTAGCTCATTTTTAATGCGACTCTAATAATTTTCATCTTTAGGAAATAg                                                                                                                                                                                                                                                               <  1:655836/217‑1 (MQ=255)                                                                 taAAAAACAGCAAAGTTACTGTTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATCACAAGATAACCACTATCAAAATTAGCTCATTTTTAATGCGACTCTAATAATTTTCATCTTTAGGAAATAGGTCAGGACGACTTTGCTGCAATCAAATCCTGCGCACAAGCCCACGCACTCGACCACGcc                                                                                                                                                                                                    >  1:214680/1‑272 (MQ=255)                                                                 taAAAAACAGCAAAGTTACTGTTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATCACAAGATAACCACTATCAAAATTAGCTCATTTTTAATGCGACTCTAATAATTTTCATCTTTAGGAAATAGGTCAGGACGACTTTGCTGCAATCAAATCCTGCGCACAAGCCCACGCACTCGACCACGcc                                                                                                                                                                                                    <  2:214676/272‑1 (MQ=255)                                                                                     gTTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATCACAAGATAACCACTATCAAAATTAGCGCATTTTTAATGCTACTCTAATAATTTTCATCTTTAGGAAATAGGTCAGGACGACTTTGCTTCAATCAAATCCTTCGCACAAACCCACGCACTCGACCACGCCCCAATCAAGTTAAAACCCCcca                                                                                                                                                                              >  1:586458/1‑274 (MQ=255)                                                                                                   gTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATCACAAGATAACCACTATCAAAATTAGCTCATTTTTAATGCGACTCTAATAATTTTCATCTTTAGGAAATAGGTc                                                                                                                                                                                                                                                            >  2:286591/1‑182 (MQ=255)                                                                                                       atatTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATCACAAGATAACCACTATCAAAATTAGCTCATTTTTAATGCGACTCTAATAATTTTCATCTTTAGGAAATAGGTCAGga                                                                                                                                                                                                                                                        <  1:286596/182‑1 (MQ=255)                                                                                                                       tGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATCACAAGATAACCACTATCAAAATTAGCTCATTTTTAATGCGACTCTAATAATTTTCATCTTTAGGAAATAGGTCAGGACGACTTTGCTGCAATCAAATCCTGCGCACAAGCCCACGCACTCGAc                                                                                                                                                                                                          >  1:664309/1‑212 (MQ=255)                                                                                                                           cACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATCACAAGATAACCACTATCAAAATTAGCTCATTTTTAATGCGACTCTAATAATTTTCATCTTTAGGAAATAGGTCAGGACGACTTTGCTGCAATCAAATCCTGCGCACAAGCCCACGCACTCGACCTCg                                                                                                                                                                                                      <  2:664300/212‑1 (MQ=255)                                                                                                                              tgagtgagTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATCACAAGATAACCACTATCAAAATTAGCTCATTTTTAATGCGACTCTAATAATTTTCATCTTTAGGAAATAGGTCAGGACGACTTTGCTGCAATCAAGTCCTGCGCACAAGCCCACGCACTCGACCACGCCCACTGGAAGTTATAGCCCCCCagccagcc                                                                                                                                                                       >  1:404558/1‑240 (MQ=255)                                                                                                                                               aCCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTNAGTTCACGGGTTCATTAGAAAATAATCACAAGATAACCACTATCAAAATTAGCTCATTTTTAATGCGACTCTAATAATTTTCATCTTTAGGAAATAGGTCAGGACGACTTTGCTGCAATCAAATCCTGCGCACAAGCCCACGCACTCGACCACGCCCa                                                                                                                                                                                                  <  1:647843/196‑1 (MQ=255)                                                                                                                                                ccTTTCCATCCACCTTATAGTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATCACAAGATAACCACTATCAAAATTAGCTCATTTTTAATGCGACTCTAATAATTTTCATCTTTAGGAAATAGGTCAGGACGACTTTGCTGCAATCAAATCCTGCGCACAAGCCCACGCACTCGACCACGCCCACTGGAAGTTATAGCCCCCCagccagcc                                                                                                                                                                       >  1:588833/1‑222 (MQ=255)                                                                                                                                                    tccatccaCCTTATAGTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATCACAAGATAACCACTATCAAAATTAGCTCATTTTTAATGCGACTCTAATAATTTTCATCTTTAGGAAATAGGTCAGGACGACTTTGCTGCAATCAAATCCTGCGCACAAGCCCACGCACTCGACCACGCCCACTGGAAGTTATAGCCCCCCAGCCAGCCGGTg                                                                                                                                                                   <  2:588824/222‑1 (MQ=255)                                                                                                                                                              agttatTACTCAGGGAGGGTTTAAGTTCACGGGCTCATTAGAAAATACTCACAAGATTACCACTATCAAAATTTGCTCATTTTTAATGCGACTCTAATAATGTTCATCTTTAGGAAATATGTCAGGACGACTTTGCTGCAATCCAATCCTGCGCACAAGCCCCCGCACTCGACCACGCCCACTGGAAGTTATAGCCCCCCAGCCAGCCGGTGACGTCCATCACTTCGCCGATGAAGTACAGCCCAGGCACTTTGCGCGCTTCCATCGTCCGTGaa                                                                                                    <  2:124706/272‑1 (MQ=255)                                                                                                                                                                      aGCATGGAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATCACAAGATAACCACTATCAAAATTAGCTCATTTTTAATGCGACTCTAATAATTTTCATCTTTAg                                                                                                                                                                                                                                                                      >  1:311252/1‑105 (MQ=255)                                                                                                                                                                      aGCATGGAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATCACAAGATAACCACTATCAAAATTAGCTCATTTTTAATGCGACTCTAATAATTTTCATCTTTAGGAAATAGGTCAGGACGACTTTGCTGCAATCAAATCCTGCGCACAAGCCCACGCACTCGACCACGCCCACTGGAAGTTATAGCCCCccagcca                                                                                                                                                                          >  2:438635/1‑197 (MQ=255)                                                                                                                                                                          tGGAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATCACAAGATAACCACTATCAAAATTAGCTCATTTTTAATGCGACTCTAATAATTTTCATCTTTAGgaaa                                                                                                                                                                                                                                                                  >  2:311246‑M2/1‑101 (MQ=255)                                                                                                                                                                          tGGAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATCACAAGATAACCACTATCAAAATTAGCTCATTTTTAATGCGACTCTAATAATTTTCATCTTTAGGAAATAGGTCAGGACGACTTTGCTGCAATCAAATCCTGCGCACAAGCCCACGCACTCGACCACGCCCACTGGAAGTTATAGCCCCCCAGCCAGCCg                                                                                                                                                                      <  1:438642/197‑1 (MQ=255)                                                                                                                                                                           ggAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATCACAAGATAACCACTATCAAAATTAGCTCATTTTTAATGCGACTCTAATAATTTTCATCTTTAGGAAATAGGTCAGGACGACttt                                                                                                                                                                                                                                                 >  1:179177/1‑121 (MQ=255)                                                                                                                                                                           ggAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATCACAAGATAACCACTATCAAAATTAGCTCATTTTTAATGCGACTCTAATAATTTTCATCTTTAGGAAATAGGTCAGGACGACTTTGCTGCAATCAAATCCTgcgc                                                                                                                                                                                                                             >  2:97681/1‑141 (MQ=255)                                                                                                                                                                           ggAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATCACAAGATAACCACTATCAAAATTAGCTCATTTTTAATGCGACTCTAATAATTTTCATCTTTAGGAAATAGGTCAGGACGACTTTGCTGCAATCAAATCCTGCGCACAAGCCCACGCACTCGACCAAGCCCACTGGAAGTTATAGCCCCCCAGCCAGCCGGTGACGTCCATCACTTCGCCGATGAAGTACAGCACAGGCACTTTGCGCGCTTCCATCGTCCGTGAAGAGAGTTCGttct                                                                                       >  1:124707/1‑273 (MQ=255)                                                                                                                                                                           ggAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATCACAAGATAACCACTATCAAAATTAGCTCATTTTTAATGCGACTCTAATAATTTTCATCTTTAGGAAATAGGTCAGAACGACTTTGCTGCAATCAAATCCTGCGCACAAGCACACGCACTCGACCACGCCCACTGGAAGTTATAGCCCCCCAGCCAGCCGGTGACGTCCAACACTTCGCCGATGAAGTACAGCCAAGGCACTTTGCGCGCTTCCATCGACCGAGAAGAGAGTTCGTTgg                                                                                       >  1:235908/1‑275 (MQ=255)                                                                                                                                                                               ggTTTCAGTTCACGGGCTCATTAGAAAATAATCACAAGATAACCACTATCAAAATTAGCTCATTTTTAATGCGACTCTAATAATTTTCATCTTTAGGAAATAGGTCAGGACGACTTtgctg                                                                                                                                                                                                                                             <  2:179174/121‑1 (MQ=255)                                                                                                                                                                               ggTTTCAGTTCACGGGCTCATTAGAAAATAATCACAAGATAACCACTATCAAAATTAGCTCATTTTTAATGCGACTCTAATAATTTTCATCTTTAGGAAATAGGTCAGGACGACTTTGCTGCAATCAAATCCTGCGCACaa                                                                                                                                                                                                                         <  1:97682/141‑1 (MQ=255)                                                                                                                                                                                  ttCAGTTCACGGGCTCATTAGAAAATAATCACAAGATAACCACTATCAAAATTAGCTCATTTTTAATGCGACTCTAATAATTTTCATCTTTAGGAAATAGGTCAGGACGACTTTGCTGCAATCAAATCCTGCGCACAAGCCCACGCACTCGACCACGCCCACTGGAAGTTATAGCCCCCCAGCCAGCCGGTGACGTCCATCACTTCGCCGATGAAGTACAGCCAAGGCACTTTGCCCGCTTCCATCGACCGTGAAGAGAGTTCGTTGGTGTACa                                                                                 >  1:317592/1‑274 (MQ=255)                                                                                                                                                                                       ttCACGGGCTCATTAGAAAATAATCACAAGATAACCACTATCAAAATTAGCTCATTTTTAATGCGACTCTAATAATTTTCATCTTTAGGAAATATGTCAGGACGACTTTGCTGCAATCAAATCCTGCGCACaa                                                                                                                                                                                                                         >  1:3573/1‑133 (MQ=255)                                                                                                                                                                                       gtCACGGGCTCATTAGAAAATAATCACAAGATAACCACTATCAAAATTAGCTCATTTTTAATGCGACTCTAATAATTTTCATCTTTAGGAAATAGGTCAGGACGACTTtgc                                                                                                                                                                                                                                               >  2:87879/2‑111 (MQ=255)                                                                                                                                                                                         cACGGGCTCATTAGAAAATAATCACAAGATAACCACTATCAAAATTAGCTCATTTTTAATGCGACTCTAATAATTTTCATCTTTAGGAAATAGGTCAGGACGACTTTGCTGCAATCAAATCCTGCGCACAAGCCCACGCACTCGACCACGCCCACTGGAAGTTATAGCCCTCCAGCCAGCCGGTGACGTCCATCACTTCGCCGATGaa                                                                                                                                            >  1:438335/1‑208 (MQ=255)                                                                                                                                                                                          aCGGGCTCATTAGAAAATAATCACAAGATAACCACTATCAAAATTAGCTCATTTTTAATGCGACTCTAATAATTTTCATCTTTAGGAAATAGGTCAGGACGACTTTGCTGCAATCAAATCCTGCGCACAAGCCCACGCACTCGACCACGCCCACTGGAAGTTATAGCCCCCCAGCCAGCCGGTGACGTCCATCACTTCGCCGATGAAGTACAGCCCAGGCACTTTGCGCGCTTCCATCGTCCGTGAAGAGAGTTCGTTGGTGTCCACGCCGCCGa                                                                        >  1:372402/1‑275 (MQ=255)                                                                                                                                                                                           cGGGCTCATTAGAAAATAATCACAAGATAACCACTATCAAAATTAGCTCATTTTTAATGCGACTCTAATAATTTTCATCTTTATgaaatatgaacaggtt                                                                                                                                                                                                                                                      <  2:203393‑M2/100‑17 (MQ=255)                                                                                                                                                                                           cGGGCTCATTAGAAAATAATCACAAGATAACCACTATCAAAATTAGCTCATTTTTAATGCGACTCTAATAATTTTCATCTTTAGGAAATAGGTCAGGACGACTTTGCTGCa                                                                                                                                                                                                                                           <  1:87880/111‑1 (MQ=255)                                                                                                                                                                                           cGGGCTCATTAGAAAATAATCACAAGATAACCACTATCAAAATTAGCTCATTTTTAATGCGACTCTAATAATTTTCATCTTTAGGAAATAGGTCAGGACGACTTTGCTGCAATCAAATCCTGCGCACAAGccc                                                                                                                                                                                                                     <  2:3573/133‑1 (MQ=255)                                                                                                                                                                                               cTCATTAGAAAATAATCACAAGATAACCACTATCAAAATTAGCTCATTTTTAATGCGACTCTAATAATTTTCATCTTTATgaaatatgaacaggttgaaa                                                                                                                                                                                                                                                  >  1:203397‑M2/1‑80 (MQ=255)                                                                                                                                                                                                 cATTAGAAAATAATCACAAGATAACCACTATCAAAATTAGCTCATTTTTAATGCGACTCTAATAATTTTCATCTTTAGgaaatatgaacaggttgaaaaaaacagtaactttgctgttttttatacttaaccactatgcatta                                                                                                                                                                                                     <  1:459973‑M2/143‑66 (MQ=255)                                                                                                                                                                                                     aGAAAATAATCACAAGATAACCACTATCAAAATTAGCTCATTTTTAATGCGACTCTAATAATTTTCATCTTTAGgaaatatgaacaggttgaaaaaaacagtaactttgctgttttttatacttaaccactatgcattaatgc                                                                                                                                                                                                 >  2:459966‑M2/1‑74 (MQ=255)                                                                                                                                                                                                                acaacaGAACCACTATTAAAATTTTCTCATTGTGAAGTCTACTCTAATCATTTTCCTGTTTAGGAAATAGGTCAGGACGACTTTGCTGCAATCAAATCCCGCGCAAAAGTCCACGCACTCGACCTCGCCCTCTGTAAGTTATCGCCCCCCATCCAGCCGGTTTCGTCCACAACTTCACAGATGAAGTACAGCCCAGGCACATTGCGCGCTTCCATCGTCCGTGAAGAGAGTTCGTTGGTGTCTACGCCGCCGAGCGTCACTTCGGCAGTGCGATa                                                  <  2:235903/275‑1 (MQ=255)                                                                                                                                                                                                                                       aGCTCATTTTTAATGCGACTCTAATAATTTTCATCTTTAGgaaatatgaacaggttgaaaaaaacagtaactttgctgttttttatact                                                                                                                                                                                                                     <  1:546188‑M2/89‑50 (MQ=255)                                                                                                                                                                                                                                           cATTTTTAATGCGACTCTAATAATTTTCATCTTTAGgaaatatgaacaggttgaaaaaaacagtaactttgctgttttttatacttaac                                                                                                                                                                                                                 >  2:546179‑M2/1‑36 (MQ=255)                                                                                                                                                                                                                                           cATTTTTAATGCGACTCTAATAATTTTCATCTTTAGGAAATAGGTCAGGACGACTTTGCTGCAATCAAATCCTGCGCACAAGCCCACGCACTCGACCACGCCCACTGGAAGTTATAGCCCCCCAGCCAGCCGGTGACGTCCATCACTTCGCCGATGAAGTACAGCCCAGGCACTTTGCGCGCTTCCATCGTCCGTGAAGAGAGTTCGTTGGTGTCCACGCCGCCGAGc                                                                      <  1:31102/228‑1 (MQ=255)                                                                                                                                                                                                                                             tttttAATGCGACTCTAATAATTTTCATCTTTAGGAAATAGGTCAGGACGACtt                                                                                                                                                                                                                                                  >  1:661182/1‑54 (MQ=255)                                                                                                                                                                                                                                                 tAATGCGACTCTAATAATTTTCATCTTTAGGAAATAGGTCAGGACGACTTtgct                                                                                                                                                                                                                                              <  2:661173/54‑1 (MQ=255)                                                                                                                                                                                                                                                        aCTCTAATAATTTTCATCTTTAGGAAATAGGTCAGGACGACTTTGCTGCAATCAAATCCTGCGCACAAGCCCACGCACTCGACCACGCCCACTGGAAGTTATAGCCCCCCAGCCAGCCGGTGACGTCCATCACt                                                                                                                                                       >  2:55459/1‑134 (MQ=255)                                                                                                                                                                                                                                                            taataaTTTTCATCTTTAGGAAATAGGTCAGGACGACTTTGCTGCAATCAAATCCTGCGCACAAGCCCACGCACTCGACCACGCCCACTGGAAGTTATAGCCCCCCAGCCAGCCGGTGACGTCCATCACTTCGc                                                                                                                                                   <  1:55459/134‑1 (MQ=255)                                                                                                                                                                                                                                                                aatTTTCCTCTTTAGGCATTACGTCAGCCCGCCTTTCCTCCACTCAACTCCTGCCCCCCAGCCCCCGCCCTCGACCACGCCCACTTGAAGTTATCGCCCCCCAGCCAGCCGGTGCCGTCCATCACTTCGCCGATGAAGTACCGCCCAGGCACTTTGCGCGCTTCCTTCGTCCGTGAAGAGAGTTCGTTGTTGTCCACGCCGCCGAGCGTCGCTTCCGCAGTGCGATAGCCTTCAGTGCCATTGGGTTGTACGCGCCAGTCGGTCAATGTGCTAAt  <  2:317586/275‑1 (MQ=255)                                                                                                                                                                                                                                                                   tttCATCTTTAGGAAATAGGTCAGGACGACTTTGCTGCAATCAAATCCTGCGCACAAGCCCACGCACTCGACCACg                                                                                                                                                                                                      >  1:118871/1‑76 (MQ=255)                                                                                                                                                                                                                                                                      cATCTTTAGGAAATAGGTCAGGACGACTTTGCTGCAATCAAATCCTGCGCACAAGCCCACGCACTCGACCACGCCCACTGGAAGTTATAGCCCCCCAGCCAGCCGGTGACGTCCATCACTTCGCCGATGAAGTACAGCCCAGGCACGGTGCGCGCTTccgt                                                                                                              >  1:621460/1‑159 (MQ=255)                                                                                                                                                                                                                                                                       aTCTTTAGGAAATAGGTCAGGACGACTTTGCTGCAATCAAATCCTg                                                                                                                                                                                                                                >  2:597665/1‑46 (MQ=255)                                                                                                                                                                                                                                                                       aTCTTTAGGAAATAGGTCAGGACGACTTTGCTGCAATCAAATCCTGCGCACAAGCCCACGCACTCGACCACGCCCa                                                                                                                                                                                                  <  2:118870/76‑1 (MQ=255)                                                                                                                                                                                                                                                                           ttAGGAAATAGGTCAGGACGACTTTGCTGCAATCAAATCCTGCGca                                                                                                                                                                                                                            <  1:597674/46‑1 (MQ=255)                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                     GCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTGTTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATCACAAGATAACCACTATCAAAATTAGCTCATTTTTAATGCGACTCTAATAATTTTCATCTTTAGGAAATAGGTCAGGACGACTTTGCTGCAATCAAATCCTGCGCACAAGCCCACGCACTCGACCACGCCCACTGGAAGTTATAGCCCCCCAGCCAGCCGGTGACGTCCATCACTTCGCCGATGAAGTACAGCCCAGGCACTTTGCGCGCTTCCATCGTCCGTGAAGAGAGTTCGTTGGTGTCCACGCCGCCGAGCGTCACTTCGGCAGTGCGATAGCCTTCAGTGCCGTTGGGTTGTACGCGCCAGTCGGTCAATGTGCTAAT  >  CP009273/3629290‑3629819

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.