New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	3771292 =	44 (1.140)	4 (0.110)	4/308	NT	7.7%	coding (534/1656 nt)	lldP	L‑lactate permease
	?	CP009273	3771695 =	53 (1.410)					coding (937/1656 nt)	lldP	L‑lactate permease

GCCTGCGGTCGTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCGTAACACTGTGGAGTATCCCGCCGTTTAAAGCCCTGTTCGCATCGGGTGGCGCGCTGTATGAGTGGGTGATCAATATTCCGGTGCCGTACCTCGATAAACTGGTTGCCCGTATGCCGCCAGTGGTCAGCGAGGCTACAGCCTATGCCGCCGTGTTTAAGTTTGACTGGTTCTCTGCCACCGGCACCGCCATTCTGTTTGCTGCACTGCTCTCGATTGTCTGGCTGAAGATGAAACCGTCTGACGCTATCAGCACCTTCGGCAGCAC  >  CP009273/3771430‑3771960                                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                                          gCCTGCGGTCGTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGGCATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATCTGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCGTAacacct                                                                                                                                                                                                                                                                   >  1:32548/1‑272 (MQ=255)                        gcTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCGTAACACTGTGGAGTATCCCGCCGTTTAAAGcc                                                                                                                                                                                                                                           <  1:309507/275‑1 (MQ=255)                                   tccGCTCAGTACTTTATCTCTTCCTTCCTTGGCCCGGCGCTGCCGGACATTATCTCTTCGCTGGTATCCCTGCTCTGCCTGCCGCTGTTCCTCAAACGCTGGCAGCCAGTGCGTGTATTCCTTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCGTAACACTGTGGAGTATCCCGCCGTTTAAAGCCCTGTTCGCa                                                                                                                                                                                                                                  <  2:653261/271‑1 (MQ=255)                                             aCCTTTGCTTTATTTTCATTGGGCCGGATCTGCCCGACTTTATCTCTTCGCTGGTATCACTGCTCTGCCTTACGCTGTTCCTCAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCGTAACACTGTGGAGTATCCCGCCGTTTAAAGCCCTGTTCGCATCGGGTGgcgcg                                                                                                                                                                                                                      <  1:306181/275‑1 (MQ=255)                                              ccTGAGCTCTAACTTCATTGGGCCGGGGTTGCCGGACATTATCTCTTCGCTTGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGGGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCGTAACACTGTGGAGTATCCCGCCGTTTAAAGCCCTGTTCGCATCGGGTGgcgcg                                                                                                                                                                                                                      <  1:253177/274‑1 (MQ=255)                                                    ctctAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGGGGGTCAGGTGTTACGTGCCTGGACACCGTTCATGTTCCTGAAAGCTACCGTAACCCTGTGGAGTAGCACGCCGGTTGAAGGCCTGTTCGGAGCGGGTGGCGAGCGGttgg                                                                                                                                                                                                               >  2:306175/1‑272 (MQ=255)                                                      ctAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAACCGCTGGCCGCCAGTGCGTGTCTTCCGTTTTGGTGCTTTGGGGGCGTCCCAGGTTGATATGACGCTGGCCCACCCCGGTTACACTGCGGGTCAGGTGTTACGTGACTGGACACCTGTCCTGATCCTGCCAGCACCCGTAACACTGTGGAGTATACCGCCGTTTAAAGCCCGTTTCGCCTCGGGTggtccgatgtgttc                                                                                                                                                                                                              >  2:253172/1‑262 (MQ=255)                                                                                  cATTATTTCTTCGCTTGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCGTAACACTGTGGAGTATCCCGCCGTTTAAAGCCCTGTTCGCATCGGGTGGCGCGCTGTATGAGTGGGTGATCAATATTCCGGTGCCGTAc                                                                                                                                                                                  <  1:187257/274‑1 (MQ=255)                                                                                   aTTTTCTCTTCGTTGGTATCTCTGCTCTTCCTGACGTTGTTCCTCAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGCTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCTGGTCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCGTAACACTGTGGAGTATCCCGCCGTTTAAAGCCCTGTTCGCATCGGGTGGCGCGCTGTATGAGTGGGTGATCAATATTCCGCTGCCGTACCt                                                                                                                                                                                <  1:719313/275‑1 (MQ=255)                                                                                          ctTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCGTAACACTGTGGAGTATCCCGCCGTTTAAAGCCCTGTTCGAATCGGGTGGCGGGCTGTATGGGTGGGTGATCAATAGTCCGGTGCCGGACCCCGGTaaa                                                                                                                                                                         >  2:719303/1‑275 (MQ=255)                                                                                            tCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGTGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACCCCGTTCCTGTTCCTGACAGCTACCGTAACACTGTGGCGTATCCCGCCGTTTAAAGCCCTGTTCGCATCGGGTGTGGCGCTTTCTGAGTTGCTGATCAAAATTCCGGTGCTCTCCCCCGATAAAc                                                                                                                                                                        >  1:283861/1‑274 (MQ=255)                                                                                                     tCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACATCTACCGTAACACTGTGGAGTATCCCGCCGTTTAAAGCCCTGTTCGCATCGGGTGGCGCGCTGTATGAGTGGGt                                                                                                                                                                                                        <  1:264002/233‑1 (MQ=255)                                                                                                                       cTGTTCCTCAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCGTaa                                                                                                                                                                                                                                                                        <  1:530256/151‑1 (MQ=255)                                                                                                                                            ccAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCGTAACACTGTGGAGTATCCCGCCGTTTAAAGCCCTGTTCGCATCGGGTGGCGCGCTGTa                                                                                                                                                                                                                 >  2:278583/1‑185 (MQ=255)                                                                                                                                                tGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCGTAACACTGTGGAGTATCCCGCCGTTTAAAGCCCTGTTCGCATCGGGTGGCGCGCTGTATGAg                                                                                                                                                                                                             <  1:278588/185‑1 (MQ=255)                                                                                                                                                      tATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCGTAACACTGTGGAGTATCCCGCCGTTTAAAGCCCTGTTCGCATCGGGTGgcg                                                                                                                                                                                                                        <  1:71328/168‑1 (MQ=255)                                                                                                                                                              tttGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCGTAACACTGTGGAGTATCCCGCCGTTTAAAGCCCTGTTCGCATCGGGTGGCGCGCTGTATGAGTGGGTGATCAATATTCCGGTGCCGTCCCTCGATAAACTgg                                                                                                                                                                     >  2:167123/1‑211 (MQ=255)                                                                                                                                                                 atcgccatgatccagaacagcacgataatggtcataaacggtagctgccgccccaccatctgaccaatctcaaagctgtcgatacctgttacctgtccggcaaccGTAACACTGTGGAGTATCCCGCCGTTTAAAGCCCTGTTCGCATCGGGTGGCGCGCTGTATGAGTGGGTGATCAATATTCCGGTGc                                                                                                                                                                                       >  1:55625‑M2/106‑190 (MQ=255)                                                                                                                                                                  gTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCGTAACACTGTGGAGTATCCCGCCGTTTAAAGCCCTGTTCGCATCGGGTGGCGCGCTGTATGAGTGGGTGATCAATATTCCGGTGCCGTACCTCGATAAACTGGTTGc                                                                                                                                                                 <  1:167126/211‑1 (MQ=255)                                                                                                                                                                     ccatgatccagaacagcacgataatggtcataaacggtagctgccgccccaccatctgaccaatctcaaagctgtcgatacctgttacctgtccggcaaccGTAACACTGTGGAGTATCCCGCCGTTTAAAGCCCTGTTCGCATCGGGTGGCGCGCTGTATGAGTGGGTGATCAATATTCCGGTGCCGTa                                                                                                                                                                                   <  2:55625‑M2/89‑1 (MQ=255)                                                                                                                                                                     aTTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCGTaa                                                                                                                                                                                                                                                                        >  2:646630/1‑105 (MQ=255)                                                                                                                                                                         gggggCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCGTAACACt                                                                                                                                                                                                                                                                    <  1:646639/105‑1 (MQ=255)                                                                                                                                                                               gTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCGTAACACTGTGGAGTATCCCGCCGTTTAAAGCCCTGTTCGCATCGGGTTGCGCGCTGTATGAGTGGGTGATCAATATTCCGGTGCCGTACCTCGATAAACTGGTTGCCCGTATGCCGCCAGTGGTCAGCGAGGCTACAGCCTATGCCGGCGTGTTGAAGTTTGACTGGTTCTCTGCCACCgtcc                                                                                    >  2:596750/1‑272 (MQ=255)                                                                                                                                                                                          ttttGACGCTGGCCAACACCGGTTACACTGCTGGTCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCGNAACACTGTNGAGTATCCCGCCGTTTAAAGCCCTGTTCGCATCGGGTGGCGCGCTGTATGAGTGGGTGATCAATATTCCGGTGCCGTACCTCGATAAACTGGTTGCCCGTATGCCGCCAGTGGTCAGCGAGGCTACAGCCTATGCCGCCGTGTTTAAGCTTGACTGCTTCTCTGCCACCGGCACCGCCATTCt                                                                          <  1:479364/271‑1 (MQ=255)                                                                                                                                                                                            atGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCGTAACACTGTGGAGTATCCCGCCGTTTAAAGCCCTGTTCGCNTCGGGTGGCGCGCTGTATGAGTGGGTGATCAATATTCCGGTGCCGTACCTCGATAAACTGGTTGCCCGTATGCCGCCAGTGGTCAGCGAGGCTACAGCCTATGCCGCCGTGTTTAAGTTTGACTGGTTCTCTGCCACCGGCACCGCCATTCt                                                                          <  1:596759/272‑1 (MQ=255)                                                                                                                                                                                              acacagggCCCACACCGGTTCCACGGCGGTTCAGTTGTTACGTGCCTGGCTACCGTTCCTGTGCCGGACAGCTACCTTAACACTGTGGAGTAGCCCGCCGGTTAAAGCCCTGTTCGCATCGGGTGGCGCGCTGTATGAGTGGGTGATCAATATTCCGGTGCCGTACCTCGATAAACTGGTTGCCCGTATGCCGCCAGTGGTCAGCGAGGCTACAGCCTATGCCGCCGTGTTTAAGTTTGACTGGTTCTCTGCCACCGGCACCGCCATTCTGtt                                                                       <  2:320746/267‑1 (MQ=255)                                                                                                                                                                                                 gCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCGTAACACTGTGGAGTATCCCGCCGTTTAAAGCCCTGTTCGCATCGGGTGGCGCGCTGTATGAGTGGGTGATCAATATTCCGGTGCCGTCCCTCGATAAACTGGTTGCCCGTATGCCGCCAGTGGTCAGCGAGGCTACAGCCTAAGGCGCCGTGTTTAAGTTTGACTGGTTCGCGTCACCCGGCACCTCCCTTCTtttttgtg                                                                  >  2:322848/1‑271 (MQ=255)                                                                                                                                                                                                     gCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCGTAACACTGTGGAGTATCCCGCCGTTTAAAGCCCTGTTCGCATCGGGt                                                                                                                                                                                                                            >  2:495501/1‑117 (MQ=255)                                                                                                                                                                                                         ttacCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCGTAACACTGTGGAGTATCCCGCCGTTTAAAGCCCTGTTCGCATCGGGTGGCGCGCTGTATGAGTGGGTGATCAATATTCCGGTGCCGTACCTCGATAAACTGGTTGCCCGTATGCCGCCAGt                                                                                                                                                  >  2:451038/3‑187 (MQ=255)                                                                                                                                                                                                         gtagctgccgccccaccatctgaccaatctcaaagctgtcgatacctgttacctgtccggcaaccGTAACACTGTGGAGTATCCCGCCGTTTAAAGCCCTGTTCGCATCGGGTGGCGCGCTGTATGAGTg                                                                                                                                                                                                           >  2:487320‑M2/66‑130 (MQ=255)                                                                                                                                                                                                         acacCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCGTAACACTGTGGAGTATCCCGTAATTTGCAGCCCTGTTCGCATCGGGTGgcg                                                                                                                                                                                                                        <  1:495508/117‑1 (MQ=255)                                                                                                                                                                                                             ctgccgccccaccatctgaccaatctcaaagctgtcgatacctgttacctgtccggcaaccGTAACACTGTGGAGTATCCCGCCGTTTAAAGCCCTGTTCGCATCGCGTGGCGCGCTGTATGAGTGGGTg                                                                                                                                                                                                       <  1:487327‑M2/69‑1 (MQ=255)                                                                                                                                                                                                             cGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCGTAACACTGTGGAGTATCCCGCCGTTTAAAGCCCTGTTCGCATCGGGTGGCGCGCTGTATGAGTGGGTGATCAATATTCCGGTGCCGTACCTCGATAAACTGGTTGCCCGTATGCCGCCAGTGGTc                                                                                                                                              <  1:451045/187‑1 (MQ=255)                                                                                                                                                                                                               gTTACACTGCGGGTCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCGTAACACTGTGGAGTATCCCGCCGTTTAAAGCCCTGTTCGCATCGGGTGGCGCGCTGTATGAGTGGGTGATCAATATTCCGGTGCCGTACCTCGATAAACTGGTTGCCCGTATGCCGCCAGTGGTCAGCGAGGCTACAGCCTATGCCGCCGTGTTTAAGTTTGACTGGTTCTCTGCCACCGGCACCGCCATTc                                                                           >  1:320752/1‑252 (MQ=255)                                                                                                                                                                                                                       gCGGGTCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCGTAACACTGTGGAGTATCCCGCCGTTTAAAGCCCTGTTCGCATCGGGTGGCGCGCTGTATGAGTGGGTGATCAATATTCCGGTGCCGTACCTCGATAAACTGGTTGCCCGTATGCCGCCAGTGGTCAGCGAGGCTACAGCCTATGCCGCCGTGTTTAAGTTTGACTGGTTCTCTGCCACCGGCACCGCCATTCTGTTTGCTGCATTGCTCTCGATTGTCTGGCt                                            <  1:577359/275‑1 (MQ=255)                                                                                                                                                                                                                         gggTCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCGTAACACTGTGGAGTATCCCGCCGTTTAAAGTCCTGTTCGCATCGGGt                                                                                                                                                                                                                            >  2:137952/1‑97 (MQ=255)                                                                                                                                                                                                                         gggTCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCGTAACACTGTGGAGTATCCCGCCGTTTAAAGCCCTGTTCGCATCGGGt                                                                                                                                                                                                                            >  2:76725/1‑97 (MQ=255)                                                                                                                                                                                                                         gggTCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCGTAACACTGTGGAGTATCCCGCCGTTTAAAGCCCTGTTCGCATCGGGTGGCGCGCt                                                                                                                                                                                                                    >  1:664570/1‑105 (MQ=255)                                                                                                                                                                                                                          ggTCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACGGTAACACTGTGGAGTATCCCGCCGTTTAAAGCCCTGTTCGCATCGGGTGGCGCGCTGTATGAGt                                                                                                                                                                                                            >  1:696280/1‑112 (MQ=255)                                                                                                                                                                                                                            tCAGGTTTTACGTGCCTGGACACCGTTCCTGTTCCTTACAGCTACCTTAACACTGTTGAGTATCCCGCCGTTTAAAGCCCTGTTCTCATCGGGTGGCGCGCTGTATGAGTGGGTGATCAATATTCCGGTGCCGTACCTCGATAATCTGGTTGCCCGTATGCCGCCAGTGGTCAg                                                                                                                                            <  2:280819/174‑1 (MQ=255)                                                                                                                                                                                                                            tCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCg                                                                                                                                                                                                                                                                           <  2:84859/47‑1 (MQ=255)                                                                                                                                                                                                                             cAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCGTAACACTGTGGAGTATCCCGCCGTTTAAAGCCCTGTTCGCATCGGGTGgcg                                                                                                                                                                                                                        <  1:137953/97‑1 (MQ=255)                                                                                                                                                                                                                             cAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCGTAACACTGTGGAGTATCCCGCCGTTTAAAGCCCTGTTCGCATCGGGTGgcg                                                                                                                                                                                                                        <  1:76726/97‑1 (MQ=255)                                                                                                                                                                                                                             cAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCGTAACACTGTGGAGTATCCCGCCGTTTAAAGCCCTGTTCGCATCGGGTGGCGCGCTGTAt                                                                                                                                                                                                                <  2:664561/105‑1 (MQ=255)                                                                                                                                                                                                                             cAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCGTAACACTGTGGAGTATCCCGCAGTTTAAAGCCCTGTTCGCATCGGGTGGCGCGCTGTATGAGTGGGTGATCAATATGCCGGTGCCGTACCTCGATAAACTGGTTGCCCGTATGCCGCCAGTGGTCAGCGAGGCTACa                                                                                                                                  <  1:323360/183‑1 (MQ=255)                                                                                                                                                                                                                              aGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCGTAACACTGTGGAGTATCCCGCCGTTTAAAGCCCTGTTCGCATCGGGTGGCGCGCTGTATGAGTGGGt                                                                                                                                                                                                        <  2:696271/112‑1 (MQ=255)                                                                                                                                                                                                                                gtgtTACGTGCCTGGACACCGGTCCTGTTCCTGACAGCTACCGTAACACTGTGGAGTATCCCGCCGTTTAAAGCCCTGTTCGCATCGGGt                                                                                                                                                                                                                            >  2:400524/1‑90 (MQ=255)                                                                                                                                                                                                                                   ttACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCGTAACACTGTGGAGTATCCCGCCGTTTAAAGCCCTGTTCGCATCGGGt                                                                                                                                                                                                                            >  2:532996/1‑87 (MQ=255)                                                                                                                                                                                                                                    tACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCGTAACACTGTGGAGTATCCCGCCGTTTAAAGCCCTGTTCGCATCGGGTGgcg                                                                                                                                                                                                                        <  1:400531/90‑1 (MQ=255)                                                                                                                                                                                                                                     aCGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCGTAACACTGTGGAGTATCccgccg                                                                                                                                                                                                                                                    >  2:602986/1‑61 (MQ=255)                                                                                                                                                                                                                                       gTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCGTAACACTGTGGAGTATCCCGCCCTTTAAAGCCCTGTTCGCATCGGGTGgcg                                                                                                                                                                                                                        <  1:533004/87‑1 (MQ=255)                                                                                                                                                                                                                                         gCCTGGACACCGTTCCTGTTCCTGACAGCTACCGTAACACTGTGGAGTATCCCGCCGTTTa                                                                                                                                                                                                                                                <  1:602995/61‑1 (MQ=255)                                                                                                                                                                                                                                          ccTGGTCTCCGTTCCTTTTCCTGACAGCTTCCGTAACACGGTTGAGTATCCCGCCGTTTAAAGCCCTGTTCGCATCGGGTGGCGCGCTGTNTGAGTGGGTGATCAATATTCCGGTGCCGTACCTCGATAAACTGGTTGCCCGTATGCCGCCAGTGGTCAGCGAGGCTACAGCCTATGCCGCCGTGTTTAAGTTTGACTGGTTCTCTGCCACCGGCACCGCCATTCTGTTTGCTGCACTGCTCTCGTTTGTCTGGCTGAAGATGAAACAGTCTGa                          <  1:513194/274‑1 (MQ=255)                                                                                                                                                                                                                                           cTGGACACCGTTCCTGTTCCTGACAGCTACCGTAACACTGTGGAGTATCCCGCCGTTTAAAGCCCTGTTCGCATCGGGt                                                                                                                                                                                                                            >  2:157514/1‑79 (MQ=255)                                                                                                                                                                                                                                               acacCGTTCCTGTTCCTGACAGCTACCGTAACACTGTGGAGTATCCCGCCGTTTAAAGCCCTGTTCGCATCGGGTGgcg                                                                                                                                                                                                                        <  1:157517/79‑1 (MQ=255)                                                                                                                                                                                                                                                          gttcctgACAGCTACCGTAACACTGTGGAGTATCCCGCCGTTTAAAGCCCTGTTCGCATCGGGTGGCGCGCTGTATGAGTGGGTGATCAATATTCCGGTGCCGTAc                                                                                                                                                                                  >  2:636200/1‑106 (MQ=255)                                                                                                                                                                                                                                                             cctgACAGCTACCGTAACACTGTGGAGTATCCCGCCGTTTAAAGCCCTGTTCGCATCGGGTGGCGCGCTGTATGAGTGGGTGATCAATATTCCGGTGCCGTACCTCGATAAACTGGTTGCCCGTATGCCGCCAGTGGTCAGCGAGGCTACAGCCTATGCCGCCGTGTTTAAGTTTGACTGGTTCTCTGCCACCGGCACCGCCATTCTGTTTGCTGCACTGCTCTCGATTGTCTGGCTGAAGATGAAACCGTCTGACGCTATCAGCACCTTCGgc       >  1:448765/1‑274 (MQ=255)                                                                                                                                                                                                                                                              ctgACAGCTACCGTAACACTGTGGAGTATCCCGCCGTTTAAAGCCCTGTTCGCATCGGGTGGCGCGCTGTATGAGTGGGTGATCAATATTCCGGTGCCGTACCTCg                                                                                                                                                                              <  1:636209/106‑1 (MQ=255)                                                                                                                                                                                                                                                                gACAGCTACCGTAACACTGTGGAGTATCCCGCCGTTTAAAGCCCTGTTCGCATCGGGTGgcg                                                                                                                                                                                                                        >  2:533236/1‑62 (MQ=255)                                                                                                                                                                                                                                                                gACAGCTACCGTAACACTGTGGAGTATCCCGCCGTTTAAAGCCCTGTTCGCATCGGGTGGCGCGCTGTATGAGTGGGTGATCAATATTCCGGTGCCGTACCTCGATAAACTGGTTGCCCGTATGCCGCCAGTGGTCAGCGAGGCTACAGCTTATGCCGCCGTGTTTAAGTTTGACTGGTTCTCTGCCACCGGCACCGCCATTCTGTTTGCTGCACTGCTCTCGATTGTCTGGCTGAAGATGAAACCGTCTGACGCTATCAGAACCTTCGgcagca   >  1:569698/1‑275 (MQ=255)                                                                                                                                                                                                                                                                  ctgCTACCGGAAACTTGTGGTGTAGCCCGCCGTTTACAGCCTTGTTGTCATCGGGTGGCGCGCTGTATGGGTGGGTGATCACTATTCCGGTTGCGTACCTCTCTAACCTGGTTGCCCGTATGCCGCCAGTGTTCAGCGAGGCTACAGCCTATGCCGCCTTGTTTAAGTTTGACCGGTTCTCTGCCACCGGCACCGCCATTCTGTTTGCTGCACTGCTCTCGATTGTCTGGCTGAAGATGAAACCGTCTGACGCTATCAGCACCTTCGGCAGCAc  <  2:299093/272‑1 (MQ=255)                                                                                                                                                                                                                                                                    gCTACCGTAACACTGTGGAGTATCCCGCCGTTTAAAGCCCTGTTCGCATCGGGTGGCGCGCt                                                                                                                                                                                                                    <  1:533244/62‑1 (MQ=255)                                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                                          GCCTGCGGTCGTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCGTAACACTGTGGAGTATCCCGCCGTTTAAAGCCCTGTTCGCATCGGGTGGCGCGCTGTATGAGTGGGTGATCAATATTCCGGTGCCGTACCTCGATAAACTGGTTGCCCGTATGCCGCCAGTGGTCAGCGAGGCTACAGCCTATGCCGCCGTGTTTAAGTTTGACTGGTTCTCTGCCACCGGCACCGCCATTCTGTTTGCTGCACTGCTCTCGATTGTCTGGCTGAAGATGAAACCGTCTGACGCTATCAGCACCTTCGGCAGCAC  >  CP009273/3771430‑3771960

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.