New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	3979708 =	75 (1.950)	6 (0.170)	4/296	NT	9.7%	intergenic (‑341/‑84)	aslA/glmZ	putative Ser‑type periplasmic non‑aryl sulfatase/sRNA antisense activator of glmS mRNA, Hfq‑dependent
	?	CP009273	3980211 =	41 (1.130)					coding (1032/1197 nt)	hemY	putative protoheme IX synthesis protein

ATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGTCTGTCCAGCGCGTCGGCAAGCCATGCGTAATCGTAGGCGTCCGGACGTTGTTTCAGCGCTGCGCGGAAGGCGAGCGATGCTTCCTGCCATTCTCCGTGCTTCATCAGTGACTGGCCCAGTGTGCTCCACAACAGCGGGCGATCGCCGACGTTTTTGATTTGCTGGCGCAGCACTTTTTCCAGCTGTTCCGGATTGTTTGTTTTCAGTCGAGGAATCGGCAGCAGTAGGCGATCGTCGTACTGGCGTTTCAGGCCATCGATGATAATTTGCTGGGCAGTATCATGATCGTCACATTCAATAAGATGTTCCGCCATTGCCACCTGCAACGCTACCTG  >  CP009273/3979949‑3980459                                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                         aTACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGTCTGTCCAGCGCGTCGGCAAGCCATGCGTAATCGTAGGCGTCCGGACGTTGTTTCAGCGGTGCGCGGAGGGCGGGGGGTGCTTTCTGCCATTCTcctttg                                                                                                                                                                                                                                              >  2:213052/1‑271 (MQ=255)                                           ttttttttATGTATCAGGAAGGCCCCGTAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGTCTGTCCAGCGCGTCGGCAAGCCATGCGTAATCGTAGGCGTCCGGACGTTGTTTCAGCGCTGCGCGGAAGGCGAGCGATGCTTCCTGCCATTCTCCGTGCTTCATCAGTGACTg                                                                                                                                                                                                                                <  1:418803/246‑1 (MQ=255)                                                                  cccGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGTCTGTCCAGCGCGTCGGCAAGCCATGCGTAATCGTAGGCGTCCGGACGTTGTTTCAGCGCTGCGCGGAAGGCGAGCGATGCTTCCTGCCATTCTCCGTGCTTCATCAGTGACTGGCCCAGTGTGCTCCACAACAGCGGGCGATCGCGGAGGGTTTTGATTTGCTg                                                                                                                                                                             >  1:288392/1‑275 (MQ=255)                                                                            cTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGTCTGTCCAGCGCGTCGGCAAGCCATGCGTAATCGTAGGCGTCCGGACGTTGTTTCAGCGCTGCGCGGAAGGCGAGCGATGCTTCCTGCCATTCTCCGTGCTTCATCAGTGACTGGCCCAgtgt                                                                                                                                                                                                                       >  1:572077/1‑223 (MQ=255)                                                                                ccTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGTCTGTCCAGCGCGTCGGCAAGCCATGCGTAATCGTAGGCGTCCGGACGTTGTTTCAGCGCTGCGCGGAAGGCGAGCGATGCTTCCTGCCATTCTCCGTGCTTCATCAGTGACTGGCCCAGTGTGCTc                                                                                                                                                                                                                   <  2:572068/223‑1 (MQ=255)                                                                                           gaAGGATCTTCTGTGGCTGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATTGCTGCAGCGTCTGCCGGCTTGTGCAGTCTGTCCAGCGCGTCGGCAAGCCATGCGTAATCGTAGGCGTCCGGACGTTGTTTCAGCGCTGCGCGGAAGGCGAGCGATGCTTCCTGCCATTCTCCGTGCTTCATCAGTGACTGGCCCAGTGTGCTCCACAACAGCGGGCGATCGCCGACGTTTTTGATTTGCTGGCGCAGCACTTTTTCCAGCTGTTc                                                                                                                                                     <  1:162227/274‑1 (MQ=255)                                                                                               gAACCACTGTGGCGGGTTTTTCTGCAACGTTAACATCACACCGTCGCGACCCATAGCTGCAGCTTCTTCCGGCTTGTGCAGTCTGTCCAGCGCGTCGGCAAGCCATGCGTAATCGTAGGCGTCCGGACGTTGTTTCAGCGCTGCGCGGAAGGCGAGCGATGCTTCCTGCCATTCTCCGTGCTTCATCAGTGACTGGCCCAGTGTGCTCCACAACAGCGGGCGATCGCCGACGTTTTTGATTTGCTGGCGCAGCACTTTTTCCAGCTGTTCCGGAt                                                                                                                                                <  2:288387/275‑1 (MQ=255)                                                                                                    actGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGTCTGTCCAGCGCGTCGGCAAGCCATGCGTAATCGTAGGCGTCCGGACGTTGTTTCAGCGCTGCGCGGAAGGCGAGCGATGCTTCCTGCCATTCTCCGTGCTTCATCAGTGACTg                                                                                                                                                                                                                                <  1:81847/190‑1 (MQ=255)                                                                                                      tgtgGCGGGTAATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGTCTGTCCAGCGCGTCGGCAAGCCATGCGTAATCGTAGGCGTCCGGACGTTGTTTCAGCGCTGCGCGGAAGGCGAGCGATGCTTCCTGCCATTCTCCGTGCTTCATCAGTGACTGGCCCAGTCTGCTCCACAACAGCGGGCGATCGCCGACGTTTTTGATTTGCTGGCGCAGCACTTTTTCCAGCTGTTCCGGAttgtttgt                                                                                                                                         >  1:707215/1‑275 (MQ=255)                                                                                                          gCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGTCTGTCCAGCGCGTCGGCAAGCCATGCGTAATCGTAGGCGTCCGGACGTTGTTTCAGCGCTGCGCGGAAGGCGAGCGATGCTTCCTGCCATTCTCCGTGCTtc                                                                                                                                                                                                                                           >  1:219899/1‑173 (MQ=255)                                                                                                            nggTNATTCGTCAACGTTAACCTCACACCTTGCCGACCCATAGCTGCCGCTTCTTCCGGCTTGGTCAGTATGTCCAGCGCGTCGGCAAGCCATGCGTAATCGTAGGCGTCCGGACGTTGTGTAAGCGCTGCGCGGAAGGCGAGCGATGCTTCCTGCCATTCTCCGTGCTTCATCAGTGACTGGCCCAGTGTGCTCCACAACAGCGGGCGATCGCCGACGTTTTTGATTTGCTGGCGCAGCACTTTTTCCAGCTGTTCCGGATTGTTTGTTTTCAg                                                                                                                                   <  2:151936/274‑1 (MQ=255)                                                                                                              gTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGTCTGTCCAGCGCGTCGGCAAGCCATGCGTAATCGTAGGCGTCCGGACGTTGTTTCAGCGCTGCGCGGAAGGCGAGCGATGCTTCCTGCCATTCTCCGTGCTtcatca                                                                                                                                                                                                                                       <  2:219894/173‑1 (MQ=255)                                                                                                               ttATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGTCTGTCCAGCGCGTCGGCAAGCCATGCGTAATCGTAGGCGTCCGGACGTTGTTTCAGCGCTGCGCGGAAGGCGAGCGATGCTTCCTGCCATTCTCCGTGCTTCATCAGTGACTGGCCCAGTGTGCTCCACAACAGCGGGCGATCGCCGACGGTTTTGATTTGCTGGCGCAGCACTTTTTCCAGCTGTTCCGGATTGTTTGTTTTCAGTCg                                                                                                                                >  1:62083/1‑275 (MQ=255)                                                                                                               ttATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGTCTGTCCAGCGCGTCCGCAAGCCATGCGTAATCGTAGGCGTCCGGCCGTTGTTTCAGCGCCGCGCGGAAGGCGAGCGCTGCGTCCTGCCATTCTCCGTGCTTCATCAGTg                                                                                                                                                                                                                                    >  2:177668/1‑175 (MQ=255)                                                                                                                   tCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGTCTGTCCAGCGCGTCGGCAAGCCATGCGTAATCGTAGGCGTCCGGACGTTGTTTCAGCGCTGCGCGGAAGGCGAGCGATGCTTCCTGCCATTCTCCGTGCTTCATCAGTGACTg                                                                                                                                                                                                                                <  1:177671/175‑1 (MQ=255)                                                                                                                                cATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGTCTGTCCAGCGCGTCGGCAAGCCATGCGTAATCGTAGGCGTCCGGACGTTGTTTCAGCGCTGCGCGGAAGGCGAGCGATGCTTCCTGCCATTCTCCGTGCTTCATCAGTGACTGGCCCAGTGTGCTCCACAACAGCGGGCGATCGCCGACGTTTTTGATTTGCTGGCGCAGCACTTTTTCCAGCTGTTCCGGATTGTTTGTTTTCAGTCGAGGAATCGGCAGCAGTa                                                                                                               <  1:213056/275‑1 (MQ=255)                                                                                                                                           cgcgACGCATAGCTGCAGCGTCTTCCGGCTTGTGCAGTCTGTCCAGCGCGTCGGCAAGCCATGCGTAATCGTAGGCGTCCGGACGTTGTTTCAGCGCTGCGCGGAAGGCGAGCGATGCTTCCTGCCCTTCTCCGTGCTtc                                                                                                                                                                                                                                           >  1:573108/1‑140 (MQ=255)                                                                                                                                               aCGCATAGCTGCAGCTTCTTCCGGCTTTGGCAGGCTGTCCAGCGCGTGTGCAAGCCATGCGTAAGTGTAGGCGTCCGGACGTTGTTTCAGCTCTGCGCGGAAGGCGATCGATGCTTCCTGCCATTCTCCGTGCTtcatca                                                                                                                                                                                                                                       <  2:573099/140‑1 (MQ=255)                                                                                                                                                          cAGCTTCTTCCGGCTTGTGCAGTCTGTCCAGCGCGTCGGCAAGCCATGCGTAATCGTAGGCGTCCGGACGTTGTTTCAGCGCTGCGCGGAAGGCGAGCGATGCTTCCTGCCATTCTCCGTGCTTCATCAGTGACTGGCCCAGTGTGCTCcaca                                                                                                                                                                                                               >  1:324934/1‑153 (MQ=255)                                                                                                                                                              ttcttcCGGCTTGTGCAGTCTGTCCAGCGCGTCGGCAAGCCATGCGTAATCGTAGGCGTCCGGACGTTGTTTCAGCGCTGCGCGGAAGGCGAGCGATGCTTCCTGCCATTCTCCGTGCTTCATCAGTGACTGGCCCAGTGTGCTCCACAACAg                                                                                                                                                                                                           <  2:324928/153‑1 (MQ=255)                                                                                                                                                                 ttcCGGCTTGTGCAGTCTGTCCAGCGCGTCGGCAAGCCATGCGTAATCGTAGGCGTCCGGACGTTGTTTCAGCGCTGCGCGGAAGGCGAGCGATGCTTCCTGCCATTCTCCGTGCTTCATCAGTGACTGGCCCAGTGTGCTCCACAACAGCGGGCGATCGCCGACGTTTTTGATTTGCTGGCGCAGCACTTTTTCCAGCTGTTCCGGATTGTTTGTTTTCAGTCGAGGAATCGGCAGCAGTAGGCGATCGTCGTACTGGCGTTTCAGGCCATCga                                                                              >  1:273931/1‑275 (MQ=255)                                                                                                                                                                           tgCAGTCTGTCCAGCGCGTCGGCAAGCCATGCGTAATCGTAGGCGTCCGGACGTTGTTTCAGCGCTGCGCGGAAGGCGAGCGATGCTTCCTGCCATTCTCCGTGCTtcatca                                                                                                                                                                                                                                       >  1:463818/1‑112 (MQ=255)                                                                                                                                                                           tgCAGTCTGTCCAGCGCGTCGGCAAGCCATGCGTAATCGTAGGCGTCCGGACGTTGTTTCAGCGCTGCGCGGAAGGCGAGCGATGCTTCCTGCCATTCTCCGTGCTTCATCAg                                                                                                                                                                                                                                      >  2:242040/1‑113 (MQ=255)                                                                                                                                                                               gTCTGTCCAGCGCGTCGGCAAGCCATGCGTAATCGTAGGCGTCCGGACGTTGTTTCAGCGCTGCGCGGAAGGCGAGCGATGCTTCCTGCCATTCTCCGTGCTTCATCAGTGa                                                                                                                                                                                                                                   <  2:463811/112‑1 (MQ=255)                                                                                                                                                                               gTCTGTCCAGCGCGTCGGCAAGCCATGCGTAATCGTAGGCGTCCGGACGTTGTTTCAGCGCTGCGCGGAAGGCGAGCGATGCTTCCTGCCATTCTCCGTGCTTCATCAGTGAc                                                                                                                                                                                                                                  <  1:242045/113‑1 (MQ=255)                                                                                                                                                                                ttgttccacncggTCGGGAAGCCCTGGGTAATCGCAGCCGTCCGGCCGTTTTTTCAGCGCTGCGCGGAAGGCGGGCGATGCTTCCTGCCATTCTCCGTGCTTCCTCAGTGACTGGCCCAGTGTGCTCCACAACAGCGGGCGATCGCCGACTTTTTTGATTTGCTGGCGCAGCACTTTTTCCAGCTGTTCCGGATTGTTTGTTTTCAGTCGAGGAATCGGCAGCAGTAGGCGATCGTCGTACTGGCGTTTCAGGCCATCGATGATAATTTGCTggg                                                               <  2:273926/263‑1 (MQ=255)                                                                                                                                                                                tCTGTCCAGCGCGTCGGCAAGCCATGCTTAATCGTAGGCGTCCGGACGTTGTTTCAGCGCTGCGCGGAAGGCGAGCGATGCTTCCTGCCATTCTCCGTGCTTCATCAGTGACTGGCCCAGTGTGCTCCACAACAGCGGGCGATCGCCGACGTTTTTGATTTGCTGGCGCAGCACTTTTTCCAGCTGTTCCGGATTGTTTGTTTTCAGTCGAGGAATCGGCAGCAGTAGGCGATCGTCGTACTGGCGTTTCAGGCCATCGATGATAATTTGCTggg                                                               <  1:12011/275‑1 (MQ=255)                                                                                                                                                                                    cgtttattatgccacagagaatcgggaaataacatcccttaacacttgttatgagataattctgtaatcctctttgcttcctgCCATTCTCCGTGCTTCATCAGTGACTGGCCCAGTGTGCTCCACAACAGCGGGCGATCGCCg                                                                                                                                                                                              >  2:675760‑M2/84‑144 (MQ=255)                                                                                                                                                                                    cgtttattatgccacagagaatcgggaaataacatcccttaacacttgttatgagataattctgtaatcctctttgcttcctgCCATTCTCCGTGCTTCATCAGTGACTGGCCCAGTGTGCTCCACAACAGCGGGCGATCGCCGACGttt                                                                                                                                                                                        >  2:233547‑M2/84‑150 (MQ=255)                                                                                                                                                                                    cgtttattatgccacagagaatcgggaaataacatcccttaacacttgttatgagataattctgtaatcctctttgcttcctgCCATTCTCCGTGCTTCATCAGTGACTGGCCCAGTGTGCTCCACAACAGCGGGCGATCGCCGACGtt                                                                                                                                                                                         >  2:17002‑M2/84‑149 (MQ=255)                                                                                                                                                                                        tattatgccacagagaatcgggaaataacatcccttaacacttgttatgagataattctgtaatcctctttgcttcctgCCATTCTCCGTGCTTCATCAGTGACTGGCCCAGTGTGCTCCACAACAGCGGGCGATCGCCGACGt                                                                                                                                                                                          <  1:675769‑M2/65‑1 (MQ=255)                                                                                                                                                                                        tattatgccacagagaatcgggaaataacatcccttaacacttgttatgagataattctgtaatcctctttgcttcctgCCATTCTCCGTGCTTCATCAGTGACTGGCCCAGTGTGCTCCACAACAGCGGGCGATCGCCGACGTTTTTg                                                                                                                                                                                     <  1:17002‑M2/70‑1 (MQ=255)                                                                                                                                                                                        tattatgccacagagaatcgggaaataacatcccttaacacttgttatgagataattctgtaatcctctttgcttcctgCCATTCTCCGTGCTTCATCAGTGACTGGCCCAGTGTGCTCCACAACAGCGGGCGATCGCCGACGTTTTTGa                                                                                                                                                                                    <  1:233552‑M2/71‑1 (MQ=255)                                                                                                                                                                                         cgcgTCGGCAAGCCCTGCGTAATCGTAGTCGTCCGGACGTTGTTGCAGCGCTGCGCGGAAGGCGAGCGATGCTTCCTGCCATTCTCCGTGCTTCATCAGTGACTGGCCCAGTGTGCTCCACAACAGCGGGCGATCGCCGACGTTTTTGATTTGCTGGCGCAGCACTTTTTCCAGCTGTTCCGGNTTGTTTGGTTTCAGTCGAGGAATCg                                                                                                                        >  1:518405/1‑209 (MQ=255)                                                                                                                                                                                         cgcgTCGGCAAGCCATGCGTAATCGTAGGCGTCCGGACGTTGTTTCAGCGCTGCGCGGAAGGCGAGCGATGCTTCCTGCCATTCTCCGTGCTTCATCAGTGACTGGCCCAGTGTGCTCCACAACAGCGGGCGATCGCCGACGTTTTTGATTTGCTGGCGCCGCACTTTTTCCAGCTGTTCCGGATTGTTTGTTTTCAGTCGCGGAAt                                                                                                                          >  1:147725/1‑207 (MQ=255)                                                                                                                                                                                              cGGCAAGCCATGCGTAATCGTAGGCGTCCGGACGTTGTTTCAGCGCTGCGCGGAAGGCGAGCGATGCTTCCTGCCATTCTCCGTGCTTCATCAGTGACTGGCCCAGTGTGCTCCACAACAGCGGGCGATCGCCGACGTTTTTGATTTGCTGGCGCAGCACTTTTTCCAGCTGTTCCGGATTGTTTGTTTTCAGTCGAGGAATCGGCAGCAGTAGGCGATCGTCGTACTGGCGTTTCAGGCCATCGATGATAATTTGc                                                                   >  1:294726/1‑257 (MQ=255)                                                                                                                                                                                              cGGCAAGCCATGCGTAATCGTAGGCGTCCGGACGTTGTTTCAGCGCTGCGCGGAAGGCGAGCGATGCTTCCTGCCATTCTCCGTGCTTCATCAGTGACTGGCCCAGTGTGCTCCACAACAGCGGGCGATCGCCGACGTTTTTGATTTGCTGGCGCAGCACTTTTTCCAGCTGTTCCGGATTGTTTGTTTTCAGTCGAGGAATCGGCAGCAGTAGGCGATCGTCGTACTGGCGTTTCAGGCCATCGATGATAATTTGCTGGGCCGTATCATGATCg                                                 >  1:340209/1‑275 (MQ=255)                                                                                                                                                                                              cGGCAAGCCATGCGTAATCGTAGGCGTCCGGACGTTGTTTCAGCGCTGCGCGGAAGGCGAGCGATGCTTCCTGCCATTCTCCGTGCTTCATCAGTGACTGGCCCAGTGTGCTCCACAACAGCGGGCGATCGACGACGgtt                                                                                                                                                                                        >  1:645652/1‑140 (MQ=255)                                                                                                                                                                                                  aaGCCATGCGTAATCGTAGGCGTCCGGCCGTTGTTTCAGCGCTGCGCGGAAGGCGAGCGATGCTTCCTGCCATTCTCCGTGCTTCATCAGTGACTGGCCCAGTGTGCTCCACAACAGCGGGCGATCGCCGACGTTTTTGATTTGCTGGCGCAGCACTTTTTCCAGCTGTTCCGGATTGTTTGTTTTCAGTCGAGGAATCGGCAGCAGTAGGCGATCGTCGTACTGGCGTTTCAGGCCATCGATGATAATTTGCTggg                                                               <  2:294720/257‑1 (MQ=255)                                                                                                                                                                                                   cgCCGTGCGTANTTGGTGGCGCCCGGACGTTGTTTCAGCGCCGCGCGGCAGGCGAGCGTTGCTTCCTGCCATTTTCCGTGCTTCATCAGTGACTGGCCCAGTGTGCTCCACAACAGCGGGCGATCGCCGACGTTTTTGATTTGCTGGCGCAGCACTTTTTCCAGCTGTTCCGGATTGTTTGTTTTCAGTCGAGGAATCGGCAGCAGTAGGCGATCGTCGTACTGGCGTTTCAGGCCATCGATGATAATTTGCTGGGCAGTATCATGATCGTcaca                                            <  2:62082/274‑1 (MQ=255)                                                                                                                                                                                                                         ccGGACGTTGTTTCAGCGCTGCGCGGAAGGCGAGCGATGCTTCCTGCCATTCTCCGTGCTtcatca                                                                                                                                                                                                                                       >  2:302898/1‑66 (MQ=255)                                                                                                                                                                                                                             aCGTTGTTTCAGCGCTGCGCGGAAGGCGAGCGATGCTTCCTGCCATTCTCCGTGCTTCATCAGTGa                                                                                                                                                                                                                                   <  1:302904/66‑1 (MQ=255)                                                                                                                                                                                                                                      cAGCGCTTCGCGGAAGGCGAGCTATGTTTCCTGCCATTCTCCGTGCTTCATCAGTGACTGTCCCAGTGTTCTCCACAACAGCGGGCGATCTCCGACGTTTTTGATTTGCTGGCGCAGCACTTTTTCCATCTGTTCCGGATTGTTTTTTTTCAGTCGAGTAATCGGCAGCAGTAGGCGATCGTCGTACTGGCGTTTCAGGCCATCGATGATAATTTGCTGGGCAGTATCATGATCGTCACATTCAATAAGATGTTCCGCCATTGCCACCTGCAACg         <  1:103978/275‑1 (MQ=255)                                                                                                                                                                                                                                           cTGCGCGGAAGGCGAGCGATGCTTCCTGCCATTCTCCGTGCTTCATCAGTGACTGGCCCAGTGTGCTCCACAACAGCGGGCGATCGCCGACGTTTTTGATTTGCTg                                                                                                                                                                             >  1:26208/1‑106 (MQ=255)                                                                                                                                                                                                                                             gcgcGGAAGGCGAGCGATGCTTCCTGCCATTCTCCGTGCTTCATCAGTGACTGGCCCAGTGTGCTCCACAACAGCGGGCGATCGCCGACGTTTTTGATTTGCTGGCGCAGCACTTTTTCCAGCTGTTCCGGATTGTTTGTTTTCAGTCGAGGNATCGGCAGCAGTAGGCGATCGTCGTACTGGCGTTTCAGGCCATCGATGATAATTTGCTTGGCAGTATCATGATCGTCACATTCAATAAGATGTTCCGCCATTGCCACCCGCAACGCTACCtg  >  1:593863/1‑275 (MQ=255)                                                                                                                                                                                                                                               gcgGAAGGCGAGCGATGCTTCCTGCCATTCTCCGTGCTTCATCAGTGACTGGCCCAGTGTGCTCCACAACAGCGGGCGATCGCCGACGTTTTTGATTTGCTGgcgc                                                                                                                                                                         <  2:26208/106‑1 (MQ=255)                                                                                                                                                                                                                                                        gagcgaTGCTTCCTGCCATTCTCCGTGCTTCATCAGTGACTGGCCCAGTGTGCTCCACAACAGCGGGCGATCGCCGACGTTTTTGATTTGCTGGCGCAGCACTTTTTCCAGCTGTTCCGGATTGTTTGTTTTCAGTCGAGGAATCg                                                                                                                        >  2:329201/1‑146 (MQ=255)                                                                                                                                                                                                                                                            gaTGCTTCCTGCCATTCTCCGTGCTTCATCAGTGACTGGCCCAGTGTGCTCCACAACAGCGGGCGATCGCCGACGTTTTTGATTTGCTGGCGCAGCACTTTTTCCAGCTGTTCCGGATTGTTTGTTTTCAGTCGAGGAATCGgcag                                                                                                                    <  1:329207/146‑1 (MQ=255)                                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                         ATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGTCTGTCCAGCGCGTCGGCAAGCCATGCGTAATCGTAGGCGTCCGGACGTTGTTTCAGCGCTGCGCGGAAGGCGAGCGATGCTTCCTGCCATTCTCCGTGCTTCATCAGTGACTGGCCCAGTGTGCTCCACAACAGCGGGCGATCGCCGACGTTTTTGATTTGCTGGCGCAGCACTTTTTCCAGCTGTTCCGGATTGTTTGTTTTCAGTCGAGGAATCGGCAGCAGTAGGCGATCGTCGTACTGGCGTTTCAGGCCATCGATGATAATTTGCTGGGCAGTATCATGATCGTCACATTCAATAAGATGTTCCGCCATTGCCACCTGCAACGCTACCTG  >  CP009273/3979949‑3980459

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.