New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	4221604 =	72 (1.870)	9 (0.240)	5/304	NT	13.0%	intergenic (‑45/+208)	yjbD/lysC	DUF3811 family protein/lysine‑sensitive aspartokinase 3
	?	CP009273	4221822 =	51 (1.370)					coding (1340/1350 nt)	lysC	lysine‑sensitive aspartokinase 3

TGCCATGATGGTGCCCTCAGTGAGCCAGAGAGTTCAGTGTACGGGAATTCGTTTGCGAGCAGAACTGATAATATTCATTTTGCCTTCTCTTAACTATTTATCTCTTTCGATAATTAATTAGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTCATTGCCAATCAACGCG‑ACCAGCGCCAGACCTTCTTCCACCTCCACCCGACACAGTGCGGAAAGCTCCATCAGCAGAGATTGCGTCAGCAACGTATCGCCAGTGGAGGTTGAACC  >  CP009273/4221554‑4222093                                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                                                 tGCCATGATGGTGCCCTCAGTGAGCCAGAGAGTTCAGTGTACGGGAATTCGTTTGCGAGCAGAACTGATAATATTCATTTTGCCTTCTCTTAACTATTTATCTCTTTCGATAATTAATTAGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGAGACAAGAAAATAAAAACGGCACGAAATATAGCTTCCAGGCCATACAGTATTAAATCAAAAAAATTAc                                                                                                                                                                                                                                                                            >  2:584006/1‑275 (MQ=255)                                     gtgtACGGGAATTCGTTTGCGAGCAGAACTGATAATATTCATTTTGCCTTCTCTTAACTATTTATCTCTTTCGATAATTAATTAGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTcaaacaaa                                                                                                                                                                                                                                                                                <  2:653116/235‑1 (MQ=255)                                         aCGGGAATTCGTTTGCGAGCAGAACTGATAATATTCATTTTGCCTTCTCTTAACTATTTATCTCTTTCGATAATTAATTAGAGATGCAGATAAAAAAATTAAAGGCAATTCTTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCCGGCCATAAAGTATTTAATCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCAACTTCGCCggg                                                                                                                                                                                                                                    >  1:20248/1‑275 (MQ=255)                                                                           tCAGTTTGCCTTCTCTTAACTATTTATCTCTTTCGATAATTAATTAGAGATGCAGATAAAAAAATTAAAGGCAATTATGATCCGAGAAAGAGGCTGGTTAACAGAGGACAGGCTAGGTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCACGAAATATAGCTTCCAGGCCATAAAATAAGTACCAAAACAAATTACTATGAAGTATGTGAAACACCTGCACGGCATATACGCACGGCACCAGGAAGTATTGGTGAAGTCTGGAGGTGCCa                                                                                                                                                                                                  >  2:142239/1‑275 (MQ=255)                                                                            cATTTTGCCTTCTCTTAACTATTTATCTCTTTCTATAATTAATTAGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGCAAGCACAGATTATGCCTGGATGCGCCAt                                                                                                                                                                                                 <  1:583336/275‑1 (MQ=255)                                                                                                  ttATCTGTTTCGATAATTAATTAGAGATGCAGAGAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGaa                                                                                                                                                                           <  1:584015/275‑1 (MQ=255)                                                                                                  ttATCTCTTTCGATAATTAATTAGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACt                                                                                                                                                                                                                                                                           >  2:111058/1‑179 (MQ=255)                                                                                                  ttATCTCTTTCGATAATTAATTAGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGttt                                                                                                                                                                                                                                                                  >  1:152501/1‑188 (MQ=255)                                                                                                      ctctTTCGATAATTAATTAGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGc                                                                                                                                                                                                                                                                       <  1:111059/179‑1 (MQ=255)                                                                                                      ctctTTCGATAATTAATTAGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGc                                                                                                                                                                                                                                                              <  2:152498/188‑1 (MQ=255)                                                                                                         cttgtcactatgctcatcaataaacgagcctgtactctgttaaccagcgtctttatcggagaataattgcctttaatttttttatctgcatctctaattaattatcgaaagagataaatagttaagagaaggcaaaatgaatattatcagttctgctcgcaaacAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCAc                                                                                                                                                                                                                                 >  2:168556‑M2/165‑214 (MQ=255)                                                                                                         cttgtcactatgctcatcaataaacgagcctgtactctgttaaccagcgtctttatcggagaataattgcctttaatttttttatctgcatctctaattaattatcgaaagagataaatagttaagagaaggcaaaatgaatattatcagttctgctcgcaaacAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATCACAAATCCTGCGACTGTTGACCggtcc                                                                                                                                                                     >  2:208505‑M2/165‑272 (MQ=255)                                                                                                         cttgtcactatgctcatcaataaacgagcctgtactctgttaaccagcgtctttatcggagaataattgcctttaatttttttatctgcatctctaattaattatcgaaagagataaatagttaagagaaggcaaaatgaatattatcagttctgctcgcaaacAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGATAAACggtac                                                                                                                                                                     >  1:195400‑M2/165‑272 (MQ=255)                                                                                                         cttgtcactatgctcatcaataaacgagcctgtactctgttaaccagcgtctttatcggagaataatcgcctttaatttttttatctgcatctctaattaattatcgaaagcgataaatagttaagagaaggcaaaatgaatattatcagttctgctcgcaaacAAATTACTATGCAGATTTTGAACCACCTGCCCGGCATCTTCGCAGAGCACCAGGAAGCACAGGATATGGCTGGATGCGCCATAAAAAATAATGCGaatggtgaaactaact                                                                                                                                                                    >  2:80933‑M2/165‑268 (MQ=255)                                                                                                             tcactattctcatcaataaacgagcctgtactctgttaaccagcgtctttatctgagaataattgcctttaatttttttatctgcatctctaattaattatcgaaagagataaatagttaagagaaggcaaaatgaatattatcagttctgctcgcaaacAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGc                                                                                                                                                                                     <  1:80934‑M2/94‑1 (MQ=255)                                                                                                             tcactatgctcatcaataaacgagcctgtactctgttaaccagcgtctttatcggagaataattgcctttaatttttttatctgcatctctaattaattatcgaaagagataaatagttaagagaaggcaagatgaatattatcagttctgctcgcaaacAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACgg                                                                                                                                                                        <  1:371271‑M2/107‑1 (MQ=255)                                                                                                             tcactatgctcatcaataaacgagcctgtactctgttaaccagcgtctttatcggagaataattgcctttaatttttttatctgcatctctaattaattatcgaaagagataaatagttaagagaaggcaaaatgaatattatcagttctgctcgcaaacAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAgg                                                                                                                                                                                                                             <  1:168559‑M2/54‑1 (MQ=255)                                                                                                                            aTGCAGATAAAAACATTAAAGTCAATTATTCTCCGATAAAGACGCTGTTTAACAGAGTACAGGCTCGGTTGTTGATGAGCATAGTGTCAAGCAAATCAATACTGCCCGCAATATAGCTTCCAAGCCATACAGTATTTACTCAACCAAATTACTATGCAGTTTTTGCACCACCTGCCCTGCATCTTCGCCGGGCACCAGGAAGCCCATCTTATGGCTGGATGCGCCCTACCAACTCCTCCGAACGTTGCACGGTTCCAGTACGCCGAATACccct                                                                                                                                                  >  2:232135/1‑274 (MQ=255)                                                                                                                                aGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTcaaaca                                                                                                                                                                                                                                                                                  <  1:226697/142‑1 (MQ=255)                                                                                                                                    aaaaaaaTTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCTATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGa                                                                                                                                                                                                         >  1:63676/1‑211 (MQ=255)                                                                                                                                        caaTTAAAGGCAAGTATTCTCCGATAAAAACGCTGGTTAACAGAGTACAGTCTCGGTTATTTATGCGCATATTGACAAGAAATTCAATACTGCCCGACATATCGCTTCCAGGCCCTACAGTATTCACTCAAACAAATTACTATTCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCATTACGCCGAATACCTCTTTGCCagcacgca                                                                                                                                     <  2:20248/274‑8 (MQ=255)                                                                                                                                        aaaTTAAAGGCAATTATTCTCCGATAAAGACGATGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCTATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATgcg                                                                                                                                                                                                     <  2:63675/211‑1 (MQ=255)                                                                                                                                                  cAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCCGAAATANAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGa                                                                                                                           <  1:516030/275‑1 (MQ=255)                                                                                                                                                                       gCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTg                                                                                                                                                                                                                                                               >  1:722946/1‑122 (MQ=255)                                                                                                                                                                       gCTGGTTAACAGAGTACAGGCTCGGTTAGCTATGAGCATAGTGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCANAACAAATCATGCGAATGTTGAACGGTTACAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGAAAGGTCATTGCCAATCAAcg                                                                                                       >  1:501046/1‑274 (MQ=255)                                                                                                                                                                           gTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGcacc                                                                                                                                                                                                                                                           <  2:722936/122‑1 (MQ=255)                                                                                                                                                                              aaaagagTACAGGCACGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCCGGAATATAGTTTCCAGGCTATACAGTATTCAATCAAACAAATTACTATGCAGTTTTTGCACCAACTTCCCAGCATCTTAGACGGGCAACAGGAAGCACAGGTTATGGCCGGATGCGACATAACAAAGCATGCAAATGTTGACCGGATCAAGAACGACAAAGAACTCATAGCCAACACCACAGGCGTCAGACAGGTCATTGCAACACAAcgcgccgaa                                                                                                >  2:212691/4‑269 (MQ=255)                                                                                                                                                                                    gTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGGGAATGCTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTAATGACCAATCCACGCG‑ACAAGCGCCAg                                                                                         >  1:60667/1‑274 (MQ=255)                                                                                                                                                                                     tttttttatctgcatctctaattaattatcgaaagagataaatagttaagagaaggcaaaatgaatattatcagttctgctcgcaaacAAATTACTATGCAGTTTTTGCACCACCTNCGCGGCATCTGCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGGGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTCATTGCCAATCAACGCG‑ACCAGCGCCAGAc                                                                                       <  1:665157‑M2/187‑1 (MQ=255)                                                                                                                                                                                     tttttttatctgcatctctaattaattatcgaaagagataaatagttaagagaaggcaaaatgaatattatcagttctgctcgcaaacAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTCATTGCCAATCAACGCG‑ACCAGCGCCAGAc                                                                                       <  1:208509‑M2/187‑1 (MQ=255)                                                                                                                                                                                     tACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTAc                                                                                                                                                                                                                                                                            >  1:636021/1‑95 (MQ=255)                                                                                                                                                                                     tACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGc                                                                                                                                                                                                             >  1:178218/1‑158 (MQ=255)                                                                                                                                                                                     tACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTCATTGCCAAACAACGCG‑ACCAGCGCCAGa                                                                                        >  1:410081/1‑274 (MQ=255)                                                                                                                                                                                         ggCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATg                                                                                                                                                                                                                                                                        <  2:636012/95‑1 (MQ=255)                                                                                                                                                                                         ggCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGa                                                                                                                                                                                                         <  2:178215/158‑1 (MQ=255)                                                                                                                                                                                             cGTTTATTGATGAGCATAGCGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCAGGCACCAGGAAGAACAGGTTATGGTCGCATACGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCAGAATACCTCATTGCCAACGCCGCAGGCTTTTGACAGGTCATTGCCAAACAAAGCGCACCA‑CACAAGACCTTCTtcc                                                                               >  1:579836/1‑275 (MQ=255)                                                                                                                                                                                               tttATTGATGAGCATAGTGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTg                                                                                                                                                                                                                                                               >  1:221133/1‑98 (MQ=255)                                                                                                                                                                                                 tATTGATGAGCATAGTGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACg                                                                                                                                                              <  1:425456/193‑1 (MQ=255)                                                                                                                                                                                                   ttGATGAGCATAGTGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGcacc                                                                                                                                                                                                                                                           <  2:221128/98‑1 (MQ=255)                                                                                                                                                                                                                tGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTCATTGCCAATCAACGCG‑ACCAGCGCCAGACCTTCTtcc                                                                               >  2:172174/1‑256 (MQ=255)                                                                                                                                                                                                                    aaGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTCATTGCCAATCAACGCG‑ACCAGCGCCAGACCTTCTtccacct                                                                           <  1:172177/256‑1 (MQ=255)                                                                                                                                                                                                                     aGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTAAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGACACCAGGAACCACAGGTTATGGCTGGATGCGCCATAACAAATCATACGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGATTTTGACAGGTCATTGCAAATCAACGCG‑ACCAGCCACAGACCTTCTTCCCCCTCCACCAGACACCATTCGGaa                                                       >  1:134524/1‑275 (MQ=255)                                                                                                                                                                                                                                    cccGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAAcg                                                                                                                                         >  1:397371/1‑179 (MQ=255)                                                                                                                                                                                                                                        aaaTATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAAcgccgc                                                                                                                                     <  2:397364/179‑1 (MQ=255)                                                                                                                                                                                                                                                cTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTCATTGCCAATCAAcg                                                                                                       >  2:252439/1‑201 (MQ=255)                                                                                                                                                                                                                                                   ccAGGCGATACAGTATTTACTCAAACAATTTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCttt                                                                                                                              >  1:519936/1‑175 (MQ=255)                                                                                                                                                                                                                                                   ccAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGtt                                                                                                                                                                                                                                                                   >  1:124431/1‑42 (MQ=255)                                                                                                                                                                                                                                                   ccAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATc                                                                                                                                                                                         >  1:241516/1‑116 (MQ=255)                                                                                                                                                                                                                                                   ccAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGAGGCGCCATAACAAATAATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTCATTGCCAATCAACGCG‑ACCAGCGCCCGAACTTCTTCCACCTCCACCCGAACCAGAGCGAAAAGCACCAACAGCAGAGACTGCGTCAGCAAc                         >  1:424873/1‑275 (MQ=255)                                                                                                                                                                                                                                                    cAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTCATTGCCAATCAACGCG‑Ac                                                                                                  <  1:252444/201‑1 (MQ=255)                                                                                                                                                                                                                                                     aGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTCATTGCCAATCAAcgc                                                                                                      >  2:35101/1‑197 (MQ=255)                                                                                                                                                                                                                                                       gCCATACAGTATTTACTCAAACAAATTACTATGCATTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGAc                                                                                                                          <  2:519929/175‑1 (MQ=255)                                                                                                                                                                                                                                                       gCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTg                                                                                                                                                                                                                                                               <  2:124430/42‑1 (MQ=255)                                                                                                                                                                                                                                                       gCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGc                                                                                                                                                                                     <  2:241511/116‑1 (MQ=255)                                                                                                                                                                                                                                                         cATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTCATTGCCAATCAACGCG‑Acc                                                                                                 <  1:35101/197‑1 (MQ=255)                                                                                                                                                                                                                                                           tACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTTCTCGGCATCTTCGCCGCGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATACTGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTCATTGCCAATCACCGCG‑ACCAGCGCCAGATCTTCTTCCACCTCCACCCGACACAGTGCGCAAAGCCCCATCAGCAGAGATTGCGCCAGCAACgcacctc                  >  2:674366/1‑268 (MQ=255)                                                                                                                                                                                                                                                           tACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTCATTGCCAATCAACGCG‑ACCAGCGCCAGACcttctt                                                                                 >  2:661839/1‑211 (MQ=255)                                                                                                                                                                                                                                                               gTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTCATTGCCAATCAACGCG‑ACCAGCGCCAGACCTTCTtccac                                                                             <  1:661848/211‑1 (MQ=255)                                                                                                                                                                                                                                                                tATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTCATTGCCAATCAACGCG‑ACCAGCGCCAGACCTTCTTCCACCTCCACCCGACACAGTGCGGAAAGCTCCATCAGCAGAGATTGCGTCAGCAACGTATCGCCAGTgg            >  2:318181/1‑275 (MQ=255)                                                                                                                                                                                                                                                                  tttACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGt                                                                                                                                                                               >  1:63744/1‑111 (MQ=255)                                                                                                                                                                                                                                                                  tttACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTCATTGCCAATCAACGCG‑ACCAGCGcc                                                                                           >  2:709833/1‑194 (MQ=255)                                                                                                                                                                                                                                                                  tttACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTCATTGCCAATCAACGCG‑ACCAGCGCCAGACCTTCTTCCACCTCCACCCGACACAGTGCGGAAAGCTCCATCAGCAGAGATTGCGTCAGCAACGTATCGCCAGCGGAg          >  1:313324/1‑275 (MQ=255)                                                                                                                                                                                                                                                                     aCTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGGAGGCTTTTGACAGGTCATTGCCAATCAACGCG‑ACCAGCGCCAGACCTTCTTCCACCTCCACCCGACACAGTGCGGAAAGCTCCATCAGCAGAGATTGCGTCAGCAACGTATCGCCAGTGGAGGtt       >  1:575998/1‑275 (MQ=255)                                                                                                                                                                                                                                                                     aCTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTCATTGCCAATCATCGCG‑ACCAGCGCCAGACCTTCTTCCACCTCCACCCGACACAGTGCGGAAAGCTCCATCAGCAGAGATTGCGTCAGCAACGTATCGCCAGTGGAGGtt       >  1:364343/1‑275 (MQ=255)                                                                                                                                                                                                                                                                     aCTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTCATTGCCAATCAACGCG‑ACCAGCGCCAGACCTTCTTCCACCTCCACCCGACACAGTGCGGAAAGCTCCATCAGCAGAGATTGCGTCAGCAACGTATCGCCAGGGGAGGtt       >  1:82044/1‑275 (MQ=255)                                                                                                                                                                                                                                                                     aCTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTCATTGCCAATCAACGCG‑ACCAGCGCCAGACCTTCTTCCACCTCCACCCGACACAGTGCGGAAAGCTCCATCAGCAGAGATTGCGTAAGCAACGTATCGCCAGTGGAGGtg       >  1:446682/1‑274 (MQ=255)                                                                                                                                                                                                                                                                      cTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGaa                                                                                                                                                                           <  2:63743/111‑1 (MQ=255)                                                                                                                                                                                                                                                                      cTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTCATTGCCAATCAACGCG‑ACCAGCGCCAGAc                                                                                       <  1:709843/194‑1 (MQ=255)                                                                                                                                                                                                                                                                      aaaaaaaAAATCAGTATGCAGTTTTTGCACCACCTGCTCCGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTCATTGCCAATCAACGCG‑ACCAGCGCCAGACCTTCTTCCACCTCCACCCGACACAGTGCGGAAAGCTCCATCAGCAGAGATTGCGTCAGCAACGTATCGCCAGTGGAGGTTg      <  2:575989‑M2/268‑1 (MQ=255)                                                                                                                                                                                                                                                                          aacAAATTACTATGCAGTTTTTGCACGACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGa                                                                                                                                                                                   >  1:460454‑M2/4‑99 (MQ=255)                                                                                                                                                                                                                                                                          aacAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGa                                                                                                                                                                                                                            >  1:294030‑M2/4‑58 (MQ=255)                                                                                                                                                                                                                                                                          aacAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTCATTGCCAATCAACGCG‑TCCAGCGCCAGACCTTCTTCCACCTCCACCCGACACAGTGCGGAAAGCTCCATCAGCAGAGATTGCGTCAGCAACGAATCGCAAGTGGAGGTTGAAcc  >  1:375334‑M2/4‑275 (MQ=255)                                                                                                                                                                                                                                                                          aacAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTCATTGCCAATCAACGCG‑ACCAGCGCCAGACCTTCTtcc                                                                               >  1:103664‑M2/4‑198 (MQ=255)                                                                                                                                                                                                                                                                          aacAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTCATTGCCAATCAACGCG‑ACCAGCGCCAGACCTTCTTCCACCTCCACCCGACACAGTGCGGAAAGCTCCATCAGCAGAGATTGCGTCAGCAACGTAt                     >  1:178936‑M2/4‑256 (MQ=255)                                                                                                                                                                                                                                                                          aacAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTCATTGCCAATCAACGCG‑ACCAGCGCCAGACCTTCTTCCACCTCCACCCGACACAGTGCGGAAAGCTCCATCAGCAGAGATTGCGTCAGCAACGTATCGCCAGTGAAGGTTGAAcc  >  1:33201‑M2/4‑275 (MQ=255)                                                                                                                                                                                                                                                                          aacAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCAAAGGTTATGGCTGGCTGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCTAATACCTCTTTGCCAACGCCGCAAGCTTTTGACCGGTCATTGCCAATCAACGCG‑ACCAGCGCCCGACCTTCTTCCACATCCACCCGACACAGTGCGGAAAGCTCCATCCGAAGAGATTGCGTCTGCAACGTATAGCAAGTGGNGgttgtgt   >  2:266009‑M2/4‑271 (MQ=255)                                                                                                                                                                                                                                                                          aacAAATTACGATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTCATTGCCAATCAACGCG‑ACCAGCGCCAGACCTTCTCCCACCTCCACCCGACACAGTGCGGAAAGCTCCATCAGCAGAGATTGCGTCAGCAACGTATCGCCAGTGGAGGTtgaaac  >  1:706308‑M2/4‑273 (MQ=255)                                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                                                 TGCCATGATGGTGCCCTCAGTGAGCCAGAGAGTTCAGTGTACGGGAATTCGTTTGCGAGCAGAACTGATAATATTCATTTTGCCTTCTCTTAACTATTTATCTCTTTCGATAATTAATTAGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTCATTGCCAATCAACGCG‑ACCAGCGCCAGACCTTCTTCCACCTCCACCCGACACAGTGCGGAAAGCTCCATCAGCAGAGATTGCGTCAGCAACGTATCGCCAGTGGAGGTTGAACC  >  CP009273/4221554‑4222093

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.