New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	4252643 =	59 (1.720)	4 (0.130)	4/302	2.4	6.7%	intergenic (+9/‑125)	dusA/pspG	tRNA‑dihydrouridine synthase A/phage shock protein G
	?	CP009273	4252787 =	57 (1.780)					coding (20/243 nt)	pspG	phage shock protein G
Rejected: Frequency below/above cutoff threshold.

CGGTAGACCGGGAGATCTTTGGTTCCTCGGATACCGATGCCGATCCGGTGGCGGTAGTGCGCGCCATGTATCCGTACATTGAGCGTGAACTCAGCCAGGGGACGTATCTCGGCCATATTACCCGGCATATGTTGGGCTTGTTCCAGGGTATTCCTGGCGCGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTCTTGTAATGCCAGCAAGAGATTTCATATTTGGGAGAGCATCATGCTGGAACTACTTTTTGTGATTGGCTTTTTTGTCATGCTGATGGTCACCGGCGTTTCGTTGCTGGGCATTATCGCCGCGCTGGTTGTGGCGACGGCCATTATGTTCCTCGGCGGTATGCTGGCATTGATGATTAAGTTGCTGC  >  CP009273/4252375‑4252912                                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                                              tttctaaggataaaaccttaggttgtgatcatcctcacaatcccttagtaacgccagcggtcataacgctgatatttcggcacttttggtgctttaatcgccttaataacccacaccaccgcaatcgccagtagtaaccacggcagcaacttaatcatcaatgccagcataccgccgaggaacataatggccgtcgccacaaccagcgcggcgataatgcccagcaacgaaacgccggtgaccatcagcatgacaaaaaagccaatcaCAAAAag                                                                                                                                                                                                                                                                         >  1:223731‑M1/269‑275 (MQ=255)  ttctaaggataaaaccgtaggttgtgatcatccgcacaatcccttagtaacgccagcggtcataacgctgatatttcggcacttttggtgctttaatcgccttaataacccacaccaccgcaatcgccagtagtaaccacggcagcaacttaatcatcaatgcctgcataccgccgaggaacanaatggccgtcgccacaaccagcgcggcgataatgcccagcaacgaaacgacggtgaccatcagcaagacaaaaaagccaaacaCAAAAag                                                                                                                                                                                                                                                                         <  1:516232‑M1/7‑1 (MQ=255)                              gATACCGNGGCCGATCCGGGGCCGGTCGTTCGCGCCATGTATCCCTACATTTAGCTTGAATTCAGCCAGGGGACGTCTCTCGGCCATATTCCCCGGCATATGTTGGGCTTGTTCCAGGGTATTCCTGGCGCGCGGCAGTTGCGGCGTTATTTAAGTGAACATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTTGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCAc                                                                                                                                                                                                                                              <  2:269565/273‑1 (MQ=255)                                                                      aTCCGTACATTGAGCGTGAACTCAGCCAGGGGACGTATCTCGGCCATATTACCCGGCATATGTTGGGCTTGTTCCAGGGTATTCCTGGCGCGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGTACACGCGCTCAAACTGGTGGCGGATAAGCGGTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGACGTTTTGCTTTTAACTCAATAGATTATTTATg                                                                                                                                                                                                    >  1:107621/1‑275 (MQ=255)                                                                                  aGCGTGAACTCAGCCAGGGGACGTATCTCGTCGATATTACCCGGCATATGTTGGGCTTGTTCCAGGGTATTCCTGGCGGGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGCGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAACTCAATAGATTATTTTTGGCATGATTCTTg                                                                                                                                                                                        >  1:144617/1‑275 (MQ=255)                                                                                  aGCGTGAACTCAGCCAGGGGACGTATCTCGGCCATATTACCCGGCATATGTTGGGCTTGTTCCAGGGTATTCCTGGCGCGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAAtt                                                                                                                                                                                                                                                               >  1:581610/1‑204 (MQ=255)                                                                                  aGCGTGAACTCAGCCAGGGGACGTATCTCGGCCATATTACCCGGCATATGTTGGGCTTGTTCCAGGGTATTCCTGGCGCGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTcac                                                                                                                                                                                                                                                            >  2:520519/1‑207 (MQ=255)                                                                                      tGAACTCAGCCAGGGGACGTATCTCGGCCATATTACCCGGCATATGTTGGGCTTGTTCCAGGGTATTCCTGGCGCGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTcacc                                                                                                                                                                                                                                                           <  2:581601/204‑1 (MQ=255)                                                                                        aaCTCAGCCAGGGGACGTATCTCGGCCATATTACCCGGCATATGTTGGGCTTGTTCCAGGGTATTCCTGGCGCGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAag                                                                                                                                                                                                                                                                         >  1:153793/1‑188 (MQ=255)                                                                                            cAGCCAGGGGACGTATCTCGGCCATATTACCCGGCATATGTTGGGCTTGTTCCAGGGTATTCCTGGCGCGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAagtagt                                                                                                                                                                                                                                                                     <  2:153792/188‑1 (MQ=255)                                                                                                               ggCCATATTACCCGGCATATGTTGGGCTTGTTCCAGGGTATTCCTGGCGCGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTg                                                                                                                                                                                                                                                   >  2:206510/1‑187 (MQ=255)                                                                                                               ggCCATATTACCCGGCATATGTTGGGCTTGTTCCAGGGTATTCCTGGCGCGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGAACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTCTTGTAATGCCAGAAAGAGATTTAATATATggg                                                                                                                                                           >  1:77517/1‑275 (MQ=255)                                                                                                                   atatTACCCGGCATATGTTGGGCTTGTTCCAGGGTATTCCTGGCGCGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCa                                                                                                                                                                                                                                               <  1:206512/187‑1 (MQ=255)                                                                                                                           cGGCATATGTTGGGCTTGTTCCAGGGTATTCCTGGCGCGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGGGGCGGATAAGCGTTAACTTTTCACCAAAAag                                                                                                                                                                                                                                                                         >  2:432109/1‑153 (MQ=255)                                                                                                                              aatatGTGGGGCTTGTTCGAGGGTATTTCTGGCGCGCGGGTGTGGCGGCGTTATTTAAGTGTAAATGCCCATAAAGCGAGTGCAGACATTATTGTGCTGGAACACGAGCTCAAACTGGTGGCGGATAAGCGTTAACTATTCACCaa                                                                                                                                                                                                                                                                             >  1:413143/2‑146 (MQ=255)                                                                                                                               atatGTTGGGCTTGTTCCAGGGTATTCCTGGCGCGCGGCAGTGGAGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAagtagt                                                                                                                                                                                                                                                                     <  1:432114/153‑1 (MQ=255)                                                                                                                                 ttagtttcctgattCCAGGGTATGCCTGGCGCGCGGCAGTGTCGGCGTTATTTAAGTGAAAAGGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGTACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTCTTGTAATGCCAGCAAGAGATTTCATATTTGGGAGAGCATCATGCTGGaa                                                                                                                                          <  2:144616/262‑1 (MQ=255)                                                                                                                                  tGTTGGGCTTGTTCCAGGGTATTCCTGGCGCGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTCTTGTAATGCCAGCAAGAGAtt                                                                                                                                                                      <  1:318466/245‑1 (MQ=255)                                                                                                                                   gTTGGGCTTGTTCCAGGGTATTCCTGGCGCGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTCTTGTAATGCCAGCAaga                                                                                                                                                                          >  1:356627/1‑240 (MQ=255)                                                                                                                                       taaccacggcagcaacttaatcatcaatgccagcataccgccgaggaacataatggccgtcgccacaaccagcgcggcgataatgcccagcaacgaaacgccggtgaccatcagcatgacaaaaaagccaatcaCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTCTTGTAATGCCAGCAAGAGATTTCat                                                                                                                                                                  <  2:585141‑M1/110‑1 (MQ=255)                                                                                                                                       ggCTTGTTCCAGGGTATTCCTGGCGCGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTaaa                                                                                                                                                                                                                     >  1:227728/1‑193 (MQ=255)                                                                                                                                       ggCTTGTTAAAGGGTATTCCTGGCGCGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTCTTGTAATGCCAGCAAGAGAtt                                                                                                                                                                      <  2:356623/240‑1 (MQ=255)                                                                                                                                        gCTTGTTCCAGGGTATTCCTGGCGCGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTg                                                                                                                                                                                                                                                   >  2:589429/1‑162 (MQ=255)                                                                                                                                           tGTTCCAGGGTATTCGTGGCGCGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTNCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTCTTGTAATGCCAGCAAGAGATTTCATATTTGGGAGAGCATCATGCTGGAACTACTTTTtgt                                                                                                                               >  1:599021/1‑275 (MQ=255)                                                                                                                                           tGTTCCAGGGTATTCCTGGCGCGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCaa                                                                                                                                                                                                                 <  2:227725/193‑1 (MQ=255)                                                                                                                                           cacggcagcaacttaatcatcaatgccagcataccgccgaggaacataatggccgtcgccacaaccagcgcggcgataatgcccagcaacgaaacgccggtgaccatcagcatgacaaaaaagccaatcaCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTCTTGTAATGCCAGCAAGAGATTTCATAttt                                                                                                                                                              >  1:585150‑M1/131‑244 (MQ=255)                                                                                                                                            gTTCCAGGGTATTCCTGGCGCGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCa                                                                                                                                                                                                                                               <  1:589438/162‑1 (MQ=255)                                                                                                                                            gTTCCAGGGTATTCCTGGCGCGCGGCAATGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCCTGATTCTTGTAATTCCAGCAAGAGATTCCATATTTGGGGGAGAATAATGCTGGAACTACTTTTtgt                                                                                                                               >  1:175976/1‑274 (MQ=255)                                                                                                                                                     acttaatcatcaatgccagcataccgccgaggaacataatggccgtcgccacaaccagcgcggcgataatgcccagcaacgaaacgccggtgaccatcagcatgacaaaaaagcccatcaCaa                                                                                                                                                                                                                                                                             <  1:6347‑M1/3‑1 (MQ=255)                                                                                                                                                       ttCCTGGCGCGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTcacca                                                                                                                                                                                                                                                          >  2:375092/1‑140 (MQ=255)                                                                                                                                                       ttCCTGGCGCGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTCCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCACTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTTTTGTAATGCCAGCAAGCGATTTCATATTTGGGAGATCAAACTGCTGGAACTACTTTTTGTGATTGTCttttt                                                                                                                   >  2:592264/1‑275 (MQ=255)                                                                                                                                                         aatcatcaatgccagcatagcggcgaagaaaataatggccgtcgacacaaccagaggggcgataatgccgagcaacgaaacgccggtgaccatcagcatgacaaaaaagccaatcaCAAAAag                                                                                                                                                                                                                                                                         >  2:6346‑M1/117‑123 (MQ=255)                                                                                                                                                           tGGCGCGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGcc                                                                                                                                                                                                                                                      <  1:375096/140‑1 (MQ=255)                                                                                                                                                            ggCGCGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAGATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCATTAGATTATTTTTGGCATGATTCTTTTAATGCCAGAAAGAGCGTTAAGATTTTGGAGTGCATCATTATTTAACTACTTTTTGTGTTAGtttttttttttt                                                                                                              >  2:313630/1‑271 (MQ=255)                                                                                                                                                             gcgcgcGGCCGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGCACCCGCGCTCAAACAGGTGGCGGATAAGCGTTAACTCTTCACAAAAATGTCTGCCCATTCACAACGCACTGAGCACTGTCTCGGGACGATTTTCTATTAACTACATAGCTTATTTTTAGCCTGCTTCTTGTAATGCCAGCAAGGACTTTAATATATGTGAGAGAAGCATGCCGGAACTGACTTTAGTGATNTTTTTTCTTGTCag                                                                                                             >  2:520488/1‑274 (MQ=255)                                                                                                                                                             gcgcgcGGCAGTGGCGGCGTTATTAAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTCTTg                                                                                                                                                                                        >  1:488252/1‑200 (MQ=255)                                                                                                                                                                 gcgGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTCTTGTAAt                                                                                                                                                                                    <  2:488245/200‑1 (MQ=255)                                                                                                                                                                                            gcgggcgcttcaaGCGGGTGCCTACATTCATGTGCGGGAACCCTTGCTCACACTGGTGGCGGATAAGCGTTTACTTTTCACCAAAAAGTAGGCAAGTTTACCACGCCGTGCGCACCGTCGCGGGACGTTTTGCTGTTCAATCGATGGATTATTGTTGGTATGAGTCTTGTCATGCCAGCAAGGGGTGTCATTTTTGGGAGAGCATCATGCTGGAACTACTTTTTGTGATTGGCTTCTTGGTCATGCTGATGGTCACCGGCGTTTCGGTGCTggg                                                                               <  2:107620/263‑1 (MQ=255)                                                                                                                                                                                             aaTGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGAATGATTCTTGTAATGCCAGCAAGAGATTTCATATTTGGGAGAGCATCATGCTGGAACTACTTTTTGTGATTGGCTTTTTTGTCATGCTGATGGTCACTGGGGTTTCGTTGCTga                                                                                >  1:344617/1‑271 (MQ=255)                                                                                                                                                                                                         aaccagcgcggcgataatgcccagcaacgaaacgccggtgaccatcagcatgacaaaaaagccaatcaCaa                                                                                                                                                                                                                                                                             <  2:5023‑M1/3‑1 (MQ=255)                                                                                                                                                                                                             agcgcggcgataatgcccagcaacgaaacgccggtgaccatcagcatgacaaaaaagccaatcaCAAAAag                                                                                                                                                                                                                                                                         >  1:5024‑M1/65‑71 (MQ=255)                                                                                                                                                                                                                       tAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTCTTGTAATGCCAGCAAGAGATTTCATATTTGGGAGAGCATCATGCTGGAACTACTTTTTGTGATTGGCTTTTTTGTCATGCTGATGGTCACCGGCGTTTCGTTGATGGGCATTATCGTGGCGCTTGtgggggtgagg                                                   >  2:129230/1‑265 (MQ=255)                                                                                                                                                                                                                             gCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTCTTGTAATGCCAGCAAGAGATTTCATATTTGGGAGCGCATCATGCTGGAACTACTTTTTGTGATTGGCTTTTTTGTCATGCTGATGGTCACCGGCGTTTCGTGGCTGGGCTTTATCACCGCTCTTTTtgtctttttttccttt                                             >  2:535482/1‑262 (MQ=255)                                                                                                                                                                                                                               ttgAACACGCGCTCAAACTGGTGTCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCTCCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTCTTGTAATGCCAGCAAGAGATTTCATATTTGGGAGAGCATCATGCTGGAACTACTTTTTGTGATTGGCTTTTTTGTCATGCTGATGGTCACCGGCGTTTCGTTGCTGGGCATTATCGCCGCGCTGGTTGTGGCGACGGCCATTa                                            <  1:129231/272‑1 (MQ=255)                                                                                                                                                                                                                               tGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAagtagt                                                                                                                                                                                                                                                                     >  2:319611/1‑57 (MQ=255)                                                                                                                                                                                                                               tGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCg                                                                                                                                                                                                                                  >  1:568661/1‑92 (MQ=255)                                                                                                                                                                                                                               tGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCa                                                                                                                                                                                                 >  1:166777/1‑125 (MQ=255)                                                                                                                                                                                                                               tGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTCTTGTAATGCCAGCAAGAGATTTCATATTTGGGAGAGCATCATGCTGGAACTACTTTTTGTGATTGGCTTTTTTGTCATGCTGATGGTCACCGGCGTTTCGtt                                                                                     >  2:273556/1‑233 (MQ=255)                                                                                                                                                                                                                               tGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTCTTGTAATGCCAGCAAGAGATTTCATATTTGGGAGAGCATCATGCTGGAACTACTTTTTGGGATTGGCTTTTTTGTCATGCTGATGGTCACCGGCGTTTCGTTGCTGGGGATTATGGCCGCGTGGGTTGTGGTCAGGGCtattat                                           >  2:159631/1‑275 (MQ=255)                                                                                                                                                                                                                                ggAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTCTTGTAATGCCAGCAAGAGATTTCATATTTGGGAGAGCATCATGCTGGAACTACTTTTTGTGATTGGCTTTTTTGTCATGCTGATGGTCACCGGCGTTTCGTTGCTGGGCATTATCGCCGCGCTGGTTGTGGCGACGGCCATTATg                                          <  2:599012/275‑1 (MQ=255)                                                                                                                                                                                                                                   acacGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCaaa                                                                                                                                                                                                                                                                 <  1:319615/57‑1 (MQ=255)                                                                                                                                                                                                                                   acacGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGtttt                                                                                                                                                                                                                              <  2:568652/92‑1 (MQ=255)                                                                                                                                                                                                                                   acacGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATTAt                                                                                                                                                                                             <  2:166776/125‑1 (MQ=255)                                                                                                                                                                                                                                   acacGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTCTTGTAATGCCAGCAAGAGATTTCATATTTGGGAGAGCATCATGCTGGAACTACTTTTTGTGATTGGCTTTTTTGTCATGCTGATGGTCACCGGCGTTTCGTTGCTg                                                                                 <  1:273560/233‑1 (MQ=255)                                                                                                                                                                                                                                     ggcacggcacaccggtggCCGAGANGCGTTAACTGTTCACCAAAAGATACTCTGAGGCACCGCGCCCGGCGCAGCGTCGCGTGGTGTGTTGCAGGTAGATCTATAGAGTATTTTGGGCATGATTCTTGTAGTGCCAGCAAGAGATGTCATAGTGGGGAGAGAATCAGGGTGGAACTACTTTTTGGGATCGGCTTTTTGGTGATGCGGATGGTAACCGGCGTTTCGTTGCCGGGGATTATCGCGGCGCTGGTTGTGGCGACGGCCATTATGTTCCt                                     <  2:403077/262‑1 (MQ=255)                                                                                                                                                                                                                                      cgcgCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTCTTGTAATGCCAGCAAGAGATTTCATATTTGGGAGAGCATCATGCTGGAACTACTTTTTGTGATTGGCTTTTTTGTCATGCTGATGGTCCCCGGCGTTTCGTTGCTGGGTATTATCTCCGTGGTGGTTGTGTCGAGGGCCAtgcgtttcgc                                     >  2:99028/1‑265 (MQ=255)                                                                                                                                                                                                                                       aacgccggtgaccatcagcatgacaaaaaagccaatcaCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGc                                                                                                                                                                                                  <  2:474158‑M1/78‑1 (MQ=255)                                                                                                                                                                                                                                        ggcTTAAACGTGTGTCGGATAATCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGGGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCANGATTCTTGTAAGGCCAGCAAGAGATTTCATATTTGGGAGAGCATCATGCTGGAACTACTTTTTGTGATTGGCTTTTTTGTCATGCTGATGGTCACCGGCGTTTCGTTGCTGGGCATTATCGCCGCGCTGGTTGTGGCGACGGCCATTATGTTCCTcgg                                  <  1:592273/274‑1 (MQ=255)                                                                                                                                                                                                                                           tCAAGCTGGTGTCGGATTAGCTTTAACTTTTCACCAAAAATTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCGTGATTCTTGTAATGCCAGCAAGAGATTTCATATTTGGGAGAGCATCATGCTGGAACTACTTTTTGTGATTGGCTTTTTTGTCATGCTGATGGTCACCGGCGTTTCGTTGCTGGGCATTATCGCCGCGCTGGTTGTGGCGACGGCCATTATGTTCCTcggcg                                <  1:288243/274‑1 (MQ=255)                                                                                                                                                                                                                                           tCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTg                                                                                                                                                                                                    >  2:401619/1‑110 (MQ=255)                                                                                                                                                                                                                                           ccggtgaccatcagcatgacaaaaaagccaatcaCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCCGTTAAATAAATAGCTTATTTTTGGCATGa                                                                                                                                                                                              >  1:474165‑M1/35‑116 (MQ=255)                                                                                                                                                                                                                                             aaaCTGGTGGCGGATAAGCGTTAACTTTTCTCCAACAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTCTTGTAATGCCAGCAAGAGATTTCATATTTGGGTGAGCATCATGCTGGAACTACTTTTTGTGATTGGTTTTTTTGTCATGCTGATGGTCACCGGCGTTTCGTTGCTGGGCATTATCGCCGCGCTGGTTGTGGCGACGGCCATTATGTTCCTCGGCGGt                              <  1:293772/274‑1 (MQ=255)                                                                                                                                                                                                                                               aCTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCAt                                                                                                                                                                                                <  1:401623/110‑1 (MQ=255)                                                                                                                                                                                                                                                cTGATGGCGANTTAGCGTTTACTTTTCACCAAATAGTAGTCACATTCACCATGCCCTTCGCACCGTCTCGTGTCGTTTTGCTGTTAAATCAATTGATTATTTTTTGCATGATTCTTGTAATGCCAGCAAGAGATTTCATATTTTTGAGAGCATCATGCTGGCACTACTTTTTGTGATTGGCTTTTTTGTCATGCTGATGGTCACCGGCGTTTCGTTGCTGGGCCTTATCGCCGCGCTGGTTGTGGCGGCGGCCATTATGTTCCTCGGCGGTATg                           <  2:77516/274‑1 (MQ=255)                                                                                                                                                                                                                                                         gATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTg                                                                                                                                                                                                    >  1:266136/1‑96 (MQ=255)                                                                                                                                                                                                                                                         gATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTCTTGTAATGCCAGCAAGAGATTTCATATTTGGGAGAGCATCATGCTGGAACTACTTTTTGTGATTGGCTTTTTTGTCATGCTGATGGTCACCGGCGTTTCGTTGCTGGGCATTATCGCCGCGCTGGTTGTGGCTACGGCCATTATGTTCCTCGGCGTTATGCTGTCAtta                  >  1:95573/1‑273 (MQ=255)                                                                                                                                                                                                                                                             aGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCAt                                                                                                                                                                                                <  2:266132/96‑1 (MQ=255)                                                                                                                                                                                                                                                                        ttCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTCTTGTAATGCCAGCAAGAGATTTCATATTTGGGAGAGCATCATGCTGGAACTACTTTTTGTGATTGGCTTTTTTGTCATGCTGATGGTCACCGGCGTTTCGTTGCTGGGCATTCTCGCCGCGCTGGTTGTGGCGACGGCCATTATGTTCCTTGGCGGTCTGTTTGCATTGATGAGTAAGTtgctgc  >  1:295219/1‑275 (MQ=255)                                                                                                                                                                                                                                                                         tCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTCTTGTAATGCCAGCAAGAGATTTCATATTTGGgaga                                                                                                                                                        >  1:47521/1‑124 (MQ=255)                                                                                                                                                                                                                                                                             CAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTCTTGTAATGCCAGCAAGAGATTTCATATTTGGGAGAGcat                                                                                                                                                    >  2:47520‑M1/1‑124 (MQ=255)                                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                                              CGGTAGACCGGGAGATCTTTGGTTCCTCGGATACCGATGCCGATCCGGTGGCGGTAGTGCGCGCCATGTATCCGTACATTGAGCGTGAACTCAGCCAGGGGACGTATCTCGGCCATATTACCCGGCATATGTTGGGCTTGTTCCAGGGTATTCCTGGCGCGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTCTTGTAATGCCAGCAAGAGATTTCATATTTGGGAGAGCATCATGCTGGAACTACTTTTTGTGATTGGCTTTTTTGTCATGCTGATGGTCACCGGCGTTTCGTTGCTGGGCATTATCGCCGCGCTGGTTGTGGCGACGGCCATTATGTTCCTCGGCGGTATGCTGGCATTGATGATTAAGTTGCTGC  >  CP009273/4252375‑4252912

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.