New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	1321351 =	35 (0.870)	3 (0.080)	3/292	NT	7.6%	coding (243/876 nt)	rluB	23S rRNA pseudouridine(2605) synthase
	?	CP009273	1321756 =	40 (1.060)					coding (648/876 nt)	rluB	23S rRNA pseudouridine(2605) synthase

AGCTCTATGAGCGAAAAGCTACAGAAAGTGCTGGCGCGTGCCGGCCACGGTTCTCGCCGTGAAATCGAATCTATTATTGAAGCCGGTCGTGTGAGTGTTGATGGCAAAATTGCTAAACTCGGCGATCGTGTTGAAGTTACCCCTGGATTGAAAATCCGTATCGATGGTCACCTGATTTCGGTACGTGAGTCCGCTGAACAAATTTGTCGCGTTCTGGCCTATTACAAACCGGAAGGTGAGTTGTGTACCCGTAACGATCCGGAAGGACGTCCAACGGTGTTTGACCGTCTGCCAAAACTGCGTGGCGCACGCTGGATTGCCGTGGGTCGCTTGGACGTTAATACCTGTGGTCTGCTGCTGTTCACCACCGATGGTGAACTGGCAAACCGTTTAATGCACCCAAGCCGTGAAGTTGAACGTGAATATGCCGTGCGTGTATTTGGTCAGGTTGACGACGCGAAACTGCGTGATTTGAGTCGTGGCGTGCAGTTGGAAGATGGTCCGGCAGCTTTTA  >  CP009273/1321103‑1321616                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                                          aGCTCTATGAGCGAAAAGCTACAGAAAGTGCTGGCGCGTGCCGGCCACGGTTCTCGCCGTGAAATCGAATCTATTATTGAAGCCGGTCGTGTGAGTGTTGATGGCAAAATTGCTAAACTCGGCGCTCGTGTTGAAGTTACCCCTGGATTGAAAATCCGTATCGATGGTCACCTGATTTCGGTACGTGAGTCCGCTGAACAAATTTGTCGCGTTCTGGCCTATTACAAACCGGAAGGTGAGTTGTGTACCCGTAACGATCCGGAAGGACGTCCaa                                                                                                                                                                                                                                                  <  1:595199/274‑1 (MQ=255)   ctctATGAGCGAAAAGCTACAGAAAGTGCTGGCGCGTGCCGGCCACGGTTCTCGCCGTGAAATCGAATCTATTATTGAAGCCGGTCGTGTGAGTGTTGATGGCAAAATTGCTAAACTCGGCGATCGTGTTTAAGTTACCCCTGTATTGAAAATCCGTATCGATGGTCACCTGATTTCGGTACGTGCGTCCGCTGCACAAATTTTTCGCGTTCTGGCCTATTACAAACCGGAAGTTGAGTTTTTTACCAGTCACGATCCGGAAGGACGTCCACCg                                                                                                                                                                                                                                                >  1:190545/1‑274 (MQ=255)   ctctATGAGCGAAAAGCTACAGAAAGTGCTGGCGCGTGCCGGCCACGGTTCTCGCCGTGAAATCGAATCTATTATTGAAGCCGGTCGTGTGAGTGTTGATGGCAAAATTGCTAAACTCGGCGATCGTGTTGAAGTTACCCCTGGATTGAAAATCCGTATCGATGGTCACCTGATTTCGGTACGTGAGTCCGCTGAACAAATTTGTCGCGTTCTGGCCTATTACAAACCGGAAGGTGAGTTGTGTACCCGTAACGAACCGGAAGGACGTCCAACg                                                                                                                                                                                                                                                >  1:108041/1‑274 (MQ=255)    tctATGAGCGAAGAGCTACAGAAAGTGCTGGCGCGTTCCGGCCACGGTTCTCGCCGTGAAATCTAATCTATTATTGAAGCCGGTCGTGTGAGTGTTGATTGCAAAATTGCTAAACTCGNCGATCGTGTTGAAGTTACCCCTGGATTGAAAATCCGTATCGATGGTCACCTGATTTCGGTACGTGAGTCCGCTGAACAAATTTGTCGCGTTCTGGCCTATTACAAACCGGAAGGTGAGTTGTGTACCCGTAACGATCCGGAAGGACGTCCaa                                                                                                                                                                                                                                                  <  1:629699/271‑1 (MQ=255)              aaaaGCTACAAAAAGTGCTGGCGCGTGCCGGCCACGGTTCTCGCCGTGAAATCGAATCTATTATTGAAGCCGGTCGTGTGAGTGTTGATGGCAAAATTGCTAAACTCGGCGATCGTGTTGAAGTTACCCCTGGATTGAAAATCCGTATCGATGGTCACCTGATTTCGGTACGTGAGTCCGCTGAACAAATTTGTCGCGTTCTGGCCTATTACAAACCGGAAGGTGAGTTGTGTACCCGTAACGATCCGGAAGGACGTCCAACGATGTTTGACCGt                                                                                                                                                                                                                                    >  1:737761/1‑275 (MQ=255)                             tGCTGGCGCGTGCCGGCCACGGTTCTCGCCGTGAAATCGAATCTATTATTGAAGCCGGTCGTGTGAGTGTTGATGGCAAAATTGCTAAACTCGGCGATCGTGTTGAAGTTACCCCTGGATTGAAAATCCGTATCGATGGTCACCTGATTTCGGTACGTGAGTCCGCTGAACAAATTTGTCGCGTTCTGGCCTATTACAAACCGGAAGGTGAGTTGTGTACCCGTAACGATCCGGAAGGACGTCCAACGGTGTTTGACCGTCTGCCAAAACTGCg                                                                                                                                                                                                                      <  1:300176/274‑1 (MQ=255)                                                            tccagtcatatatatgatTGAAGCCGTTCGGGGGAGTGTTGATGGCAAAATTGCTAAACTCGGTGATCGTGTTGAAGTTACCCCTGGATTGGAAATCCGTATCGATGGTCACCTGATTTCGGTACGTGAGTCCGCTGAACAAATTTGTCGCGTTCTGGCCTATTACAAACCGGAAGGTGAGTTGTGTACCCGTAACGATCCGGAAGGACGTCCAACGGTGTTTGACCGTCTGCCAAAACTGCGTGGCGCACGCTGGATTGCCGTGGGTCGCTTg                                                                                                                                                                                       <  2:108040/262‑1 (MQ=255)                                                            ctcacctgactttgacgtttcaccgcacgacgattctgattctccttcattcgacgacggtctttttctacagcgactttagagctgttttctggcgttagctccaccagttcgcgcagatagttagtctgggcgaggtccagctccgtccagccaccgcgtgccagaccttttggcagtgggatatcaCCGTAACGATCCGGAAGGACGTCCAACGGTGTTTGACCGTCTGCCAAAACTGCGTGGCGCACGCTGGATTGCCGTGGGTCGCTTgg                                                                                                                                                                                      >  1:37111‑M1/190‑275 (MQ=255)                                                                                       tCGTGTGAGTGTTGATGGCAAAATTGCTAAACTCGGCGATCGTGTTGAAGTTACCCCTGGATTGAAAATCCGTATCGATGGTCACCTGATTTCGGTACGTGAGTCCGCTGAACAAATTTGTCGCGTTCTGGCCTATTACAAACCGGAAGGTGAGTTGTGTACCCGTAACGATCCGGAAGGACGTCCAACGGTGTTTGACCGTCTGCCAAAACTGCGTGGCGCACGCTGGGGTGCCGTGGGTCGCTTGGACGTTAATACCTGTGGGnggctggcgt                                                                                                                                                           >  2:273273/1‑271 (MQ=255)                                                                                       tCGTGTGAGTGTTGATGGCAAAATTGCTAAACTCGGCGATCGTGTTGAAGTTACCCCTGGATTGAAAATCCGTATCGATGGTCACCTGATTTCGGTACGTGAGTCCGCTGAACAAATTTGTCGCGTTCTGGCCTATTACAAACCGGAAGGTGAGTTGTGTACCCGTAACGATCCGGAAGGACGTCCAACGGTGTTGGACCGTCTGCCAAAACTGCGTGGCGCACGCTGGATTGCCGTGGGTCGc                                                                                                                                                                                          >  1:699475/1‑244 (MQ=255)                                                                                                 gtTGATGGCAAAATTGCTAAACTCGGCGATCGTGTTGAAGTTACCCCTGGATTGAAAATCCGTATCGATGGTCACCTGATTTCGGTACGTGAGTCCGCTGAACAAATTTGTCGCGTTCTGGCCTATTACAAACCGGAAGGTGAGTTGTGTACCCGTAACGATCCGGAAGGACGTCCAACGGTGTTTGACCGTCTGCCAAAACTGCGTGGCGCACGc                                                                                                                                                                                                            >  1:638825/1‑216 (MQ=255)                                                                                                     aTGGCAAAATTGCTAAACTCGGCGATCGTGTTGAAGTTACCCCTGGATTGAAAATCCGTATCGATGGTCACCTGATTTCGGTACGTGAGTCCGCTGAACAAATTTGTCGCGTTCTGGCCTATTACAAACCGGAAGGTGAGTTGTGTACCCGTAACGATCCGGAAGGACGTCCAACGGTGTTTGACCGTCTGCCAAAACTGCGTGGCGCACGCTGGa                                                                                                                                                                                                        <  2:638811/216‑1 (MQ=255)                                                                                                                 cTAAACTCGGCGATCGTGTTGAAGTTACCCCTGGATTGAAAATCCGTATCGATGGTCACCTGATTTCGGTACGTGAGTCCGCTGAACAAATTTGTCGCGTTCTGGCCTATTACAAACCGGAAGGTGAGTTGTGTAccc                                                                                                                                                                                                                                                                          >  2:682718/1‑138 (MQ=255)                                                                                                                 cTAAACTCGGCGATCCTGTTGAAGTTACTACTGGATTGAAAATCCGTATCGATGGTCACCTGATTTCGGTACGTGAGTCCGCTGAACAAATTTGTCGCGTTCTGGCATATTACAAACCGGAAGGTGAGTTGTGTACCCGTAACGATCCGGAAGGACGTCCAACGGTGTTTGACCGTCTGCCAANACTGCGTGGCGCACGCTGGATCGcc                                                                                                                                                                                                   >  1:500926/1‑209 (MQ=255)                                                                                                                     aCTCGGCGATCGTGTTGAAGTTACCCCTGGATTGAAAATCCGTATCGATGGTCACCTGATTTCGGTACGTGAGTCCGCTGAACAAATTTGTCGCGTTCTGGCCTATTACAAACCGGAAGGTGAGTTGTGTACCCGTaa                                                                                                                                                                                                                                                                      <  1:682732/138‑1 (MQ=255)                                                                                                                               cGTGTTGAAGTTACCCCTGGATTGAAAATCCGTATCGATGGTCACCTGATTTCGGTACGTGAGTCCGCTGAACAAATTTGTCGCGTTCTGGCCTATTACAAACCGGAAGGTGAGTTGTGTACCCGTAACGATCCGGAAGGACGTCCAACGGTGTTTGACCGTCTGCCAAAACTGCGTGGCGCACGCTGGATTGCCGTGGGTCGCTTGGACGTTAATAcc                                                                                                                                                                           >  2:13070/1‑219 (MQ=255)                                                                                                                                   ttGAAGTTACCCCTGGATTGAAAATCCGTATCGATGGTCACCTGATTTCGGTACGTGAGTCCGCTGAACAAATTTGTCGCGTTCTGGCCTATTACAAACCGGAAGGTGAGTTGTGTACCCGTAACGATCCGGAAGGACGTCCAACGGTGTTTGACCGTCTGCCAAAACTGCGTGGCGCACGCTGGATTGCCGTGGGTCGCTTGGACGTTAATACCtgtg                                                                                                                                                                       <  1:13070/219‑1 (MQ=255)                                                                                                                                                      gAAAATCCGTATCGATGGTCACCTGATTTCGGTACGTGAGTCCGCTGAACAAATTTGTCGCGTTCTGGCCTATTACAAACCGGAAGGTGAGTTGTGTACCCGTAACGATCCGGAAGGACGTCCAACGGTGTTTGACCGTCTGCCAAAACTGCGTGGCGCACGCTGGATTGCCGTGGGTCGCTTGGACGTTAATACCTGTGGTCTGCTGCTGTTCACCACCGCTGGTGAACTgg                                                                                                                                      >  1:8027/1‑233 (MQ=255)                                                                                                                                                       aaaaTCCGTATCGATGGTCACCTGATTTCGGTACGTGAGTCCGCTGAACAAATTTGTCGCGTTCTGGCCTATTACAAACCGGAAGGTGAGTTGTGTACCCGTAACGATCCGGAAGGACGTCCAACGGTGTTTGACCGTCTGCCAAAACTGCGTGGCGCACGCTGGATTGCCGTGGGTCg                                                                                                                                                                                           >  2:625033/1‑179 (MQ=255)                                                                                                                                                           tCCGTATCGATGGTCACCTGATTTCGGTACGTGAGTCCGCTGAACAAATTTGTCGCGTTCTGGCCTATTACAAACCGGAAGGTGAGTTGTGTACCCGTAACGATCCGGAAGGACGTCCAACGGTGTTTGACCGTCTGCCAAAACTGCGTGGCGCACGCTGGATTGCCGTGGGTCGCTTg                                                                                                                                                                                       <  1:625047/179‑1 (MQ=255)                                                                                                                                                               tttCGATGGTCACCTGATTTCGGTACGTGAGTCCGCTGAACAAATTTGTCGCGTTCTGGCCTATTACAAACCGGAAGGTGAGTTGTGTACCCGTAACGATCCGGAAGGACGTCCAACGGTGTTTGACCGTCTGCCAAAACTGCGTGGCGCACGCTGGATTGCCGTGGGTCGCTTGGACGTTAATACCTGTGGTCTGCTGCTGTTCACCACCGATGGTGAACTGGCAAACCGTTTAATGCACCCAAGCCGTGAAGTTGAACGTGAATATGCcgtgc                                                                                   <  1:273277/273‑1 (MQ=255)                                                                                                                                                                 ggagaagcgcctggATTTCGGTACGTGAGGACGCTGAAACGATGTGTCGCGTTCTGGCCTATTACAAACCGGCAGGTTAGTGGGGTACCCGTAACGATCCGGAAGGACGTCCAACGGTGTTTGCACGGCTGCCAACACTGCGTGGCGCACGCTGGATTGCCGTGGGTCGCTTGGACGTTAATACCTGTGGTCTGCTGCTGTTCACCACCGATGGTGAACTGGCAAACCGTTTAATGCACCCAAGCCGTGAAGTTGAACGTGAATATGCcgtgcg                                                                                  <  2:158981/261‑1 (MQ=255)                                                                                                                                                                          aCCTGATTTCGGTACGTGAGTCCGCTGAACAAATTTGTCGCGTTCTGGCCTATTACAAACCGGAAGGTGAGTTGTGTACCCGTAACGATCCGGAAGGACGTCCAACGGTGTTTGACCGTCTGCCAAAACTGCGTGGCGCACGCTGGATTGcc                                                                                                                                                                                                   >  2:713138/1‑152 (MQ=255)                                                                                                                                                                              gATTTCGGTACGTGAGTCCGCTGAACAAATTTGTCGCGTTCTGGCCTATTACAAACCGGAAGGTGAGTTGTGTACCCGTAACGATCCGGAAGGACGTCCAACGGTGTTTGACCGTCTGCCAAAACTGCGTGGCGCACGCTGGATTGCCGTgg                                                                                                                                                                                               <  1:713152/152‑1 (MQ=255)                                                                                                                                                                                         gTGAGTCCGCTGAACAAATTTGTCGCGTTCTGGCCTATTACAAACCGGAAGGTGAGTTGTGTACCCGTAACGATCCGGAAGGACGTCCAACGGTGTTTGACCGTCTGCCACAACTGCGTGGCGCACGCTGGCTTGCCGTGGGTCGCTTGGACGTTAATACCTGTGGGCTGCTGCTGTTCACCACCGATGGTGAACTGGCAAACCGCTTAATGCACCCAACCCGTGAAGTTGACCGTGAATATGCCGTGCGTGCATTTGGTcctggctcttataa                                                          >  1:158983/1‑261 (MQ=255)                                                                                                                                                                                             tgggcgaggtccagctccgtccagccaccgcgtggcagaccttttggcagtgggatatcaCCGTAACGATCCGGAAGGACGTCCAACGGTGTTTGACCGTCTGCCAAAACTGCGTGGCGCACGCTGGATTGCCGTGGGTCGCTTGGACGTTAATACCTGTGGTctgctgct                                                                                                                                                             <  2:252866‑M1/111‑1 (MQ=255)                                                                                                                                                                                                 cgaggtccagctccgtccagccaccgcgtggcagaccttttggcagtgggatatcaCCGTAACGATCCGGAAGGACGTCCAACGGTGTTTGACCGTCTGCCAAAACTGCGTGGCGCACGCTGGATTGCCGTGGGTCGCTTGGACGTTAATACCTGTGGTCTGCTGCTGTTc                                                                                                                                                         >  1:252869‑M1/57‑171 (MQ=255)                                                                                                                                                                                                     gtccagctccgtccagccaccgcgtggcagaccttttggcagtgggatatcac                                                                                                                                                                                                                                                                           <  2:248473‑M1/1‑1 (MQ=255)                                                                                                                                                                                                         agctccgtccagccaccgcgtggcagaccttttggcagtgggatatcaCCGTa                                                                                                                                                                                                                                                                       >  1:248476‑M1/49‑53 (MQ=255)                                                                                                                                                                                                                                cccacccGGAAGGTGAGTAGGGTACCCGTAACGAGCCGGAAGGACGTCCAACGGTGTTTGACCGTCTGCCAAAACTGCGTGGCGCACGCTGGATGTCCGGGGGTCGCTTGGACGTTAATACCTGTGGTCTGCTGCTGTTCACCACCGATGGTGAACTGGCAAACCGTTTAATGCACCCAAGCCGTGAAGTTGAACGTGAATATGCCGTGCGTGTATTTGGTCAGGTTGACGACGCGAAACTGCGTGATTTGAGTCGTGGCGTGCAGTTGGAAGa                   <  2:199455/269‑1 (MQ=255)                                                                                                                                                                                                                                   aaCCGGAAGGTGAGTTGTGTACCCGTAACGATCCgg                                                                                                                                                                                                                                                              >  1:112831/1‑36 (MQ=255)                                                                                                                                                                                                                                       ggAAGGTGAGTTGTGTACCCGTAACGATCCGGAAgg                                                                                                                                                                                                                                                          <  2:112830/36‑1 (MQ=255)                                                                                                                                                                                                                                        gAAGGTGAGTTGTGTACCCGTAACGATCCGGAAGGACGTCCAACGGTGTTTGACCGTCTGCCAAAACTGCGTGGCGCACGCTGGATTGCCGTGGGTCGCTTGGACg                                                                                                                                                                                   >  2:474484/1‑106 (MQ=255)                                                                                                                                                                                                                                        gAAGGTGAGTTGTGTACCCGTAACGATCCGGAAGGACGTCCAACGGTGTTTGACCGTCTGCCAAAACTGCGTGGCGCACGCTGGATTGCCGTGGGTCGCTTGGACGTTAATACCTGTGGTCTGCTGCTGTTCACCACCGATGGTGAACTGGCAAACCGTTTAATGCACCCAAGCCGTGAAGTTGAACGTGAATATGCCGTGCGTGTATTTGGTCAGGTTGACGACGCGAAACTGCGTGATTTGAGTCGTGGCGTGCAGTTgg                       >  1:199457/1‑262 (MQ=255)                                                                                                                                                                                                                                            gTGAGTTGTGTACCCGTAACGATCCGGAAGGACGTCCAACGGTGTTTGACCGTCTGCCAAAACTGCGTGGCGCACGCTGGATTGCCGTGGGTCGCTTGGACGTTaa                                                                                                                                                                               <  1:474492/106‑1 (MQ=255)                                                                                                                                                                                                                                            gTGAGTGGTGTACCCGTAACGATCCGGAAGGACGTCCAACGGTGTTTGACCGTCTGCCAAAACTGCGTGGCGCACGCTGGATTGCCGTGGGTCGCTTGGACGTTAATACCTGTGGTCTGCTGCTGTTCACCCCCGATGGTGAACTGGCAAACCGTTTAATGCACCCAAGCCGTGAAGTTGAACg                                                                                                 <  1:133920/184‑1 (MQ=255)                                                                                                                                                                                                                                                gTTGTGTACCCGTAACGATCCGGAAGGACGTCCAACGGTGTTTGACCGTCTGCCAAAACTGCGTGGCGCACGCTGGATTGCCGTggg                                                                                                                                                                                              >  2:23009/1‑87 (MQ=255)                                                                                                                                                                                                                                                gTTGTGTACCCGTAACGATCCGGAAGGACGTCCAACGGTGTTTGACCGTCTGCCAAAACTGCGTGGCGCACGCTGGATTGCCGTGGGTCGCTTGGACGTTGATACCTGTGGTCTGCTGCTGTTCACCACCGATGGTGAACTGGCaa                                                                                                                                   >  1:233515/1‑146 (MQ=255)                                                                                                                                                                                                                                                gTTGTGTACCCGTAACGATCCGGAAGGACGTCCAACGGTGTTTGACCGTCTGCCAAAACTGCGTGGCGCACGCTGGATTGCCGTGGGTCGCTTGGACGTTAATACCTGTGGTCTGCTGCTGTTCACCACCGATGGTGAACTGGCAAACCGTTTAATGCACCCAAGCCGt                                                                                                            >  2:476292/1‑169 (MQ=255)                                                                                                                                                                                                                                                gTTGTGTACCCGTAACGATCCGGAAGGACGTCCAACGGTGTTTGACCGTCTGCCAAAACTGCGTGGCGCACGCTGGATTGCCGTGGGTCGCTTGGACGTTAATACCTGTGGTCTGCTGCTGTTCACCACCGATGGTGAACTGGCAAACCGTTTAATGCACCCAAGCCGTGAAGTTGAGCGTGAATATGCCGTGCGTGTATTTGGTCAGGTTGACGACGCGACACTGCGTGATTTGAGTCGTTGCGTGCAGTTGGACGATGGTCCGGCAGATTTTa  >  1:386395/1‑275 (MQ=255)                                                                                                                                                                                                                                                gTTGTGTACCCGTAACGATCCGGAAGGACGTCCAACGGTGTTTGACCGTCTGCCAAAACTGCGTGGCGCACGCTGGATTGACGTGGGTCGCTTGGACGTTAATACCTGTGGTCTGCTGCTGTTCACCACCGATGGTGAACTGGCAAACCGTTTAATGCACCCAAGCAGTGAAGTTGAACGTGAata                                                                                           >  2:101727/1‑186 (MQ=255)                                                                                                                                                                                                                                                    tgtACCCGTAACGATCCGGAAGGACGTCCAACGGTGTTTGACCGTCTGCCAAAACTGCGTGGCGCACGCTGGATTGCCGTGGGTCGc                                                                                                                                                                                          <  1:23010/87‑1 (MQ=255)                                                                                                                                                                                                                                                    tgtACCCGTAACGATCCGGAAGGACGTCCAACGGTGTTTGACCGTCTGCCAAAACTGCGTGGCGCACGCTGGATTGCCGTGGGTCGCTTGGACGTTGATACCTGTGGTCTGCTGCTGTTCACCACCGATGGTGATCTGGCAAACCg                                                                                                                               <  2:233513/146‑1 (MQ=255)                                                                                                                                                                                                                                                    tgtACCCGTAACGATCCGGAAGGACGTCCAACGGTGTTTGACCGTCTGCCAAAACTGCGTGGCGCACGCTGGATTGCCGTGGGTCGCTTGGACGTTAATACCTGTGGTCTGCTGCTGTTCACCACCGATGGTGACCTGGCAAGCCGTTTAATGCACCCAAGCCGTGAAg                                                                                                        <  1:476301/169‑1 (MQ=255)                                                                                                                                                                                                                                                      tACCCGTAACGATCCGGAAGGACGTCCAACGGTGTTTGACCGTCTGCCAACACTGCGTGGCGCACGCTGGATTGCCGTGGGTCGCTTGGACGTTAATACCTGTGGTCTGCTGCTGTTCACCACCGATGGTGAACTGGCAAACCGt                                                                                                                              >  1:712233/1‑145 (MQ=255)                                                                                                                                                                                                                                                      tACCCGTAACGATCCGGAAGGACGTCCAACGGTGTTTGACCGTCTGCCAAAACTGCGTGGCGCACGCTGGATTGCCGTGGGt                                                                                                                                                                                             >  2:199995/1‑82 (MQ=255)                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                                          AGCTCTATGAGCGAAAAGCTACAGAAAGTGCTGGCGCGTGCCGGCCACGGTTCTCGCCGTGAAATCGAATCTATTATTGAAGCCGGTCGTGTGAGTGTTGATGGCAAAATTGCTAAACTCGGCGATCGTGTTGAAGTTACCCCTGGATTGAAAATCCGTATCGATGGTCACCTGATTTCGGTACGTGAGTCCGCTGAACAAATTTGTCGCGTTCTGGCCTATTACAAACCGGAAGGTGAGTTGTGTACCCGTAACGATCCGGAAGGACGTCCAACGGTGTTTGACCGTCTGCCAAAACTGCGTGGCGCACGCTGGATTGCCGTGGGTCGCTTGGACGTTAATACCTGTGGTCTGCTGCTGTTCACCACCGATGGTGAACTGGCAAACCGTTTAATGCACCCAAGCCGTGAAGTTGAACGTGAATATGCCGTGCGTGTATTTGGTCAGGTTGACGACGCGAAACTGCGTGATTTGAGTCGTGGCGTGCAGTTGGAAGATGGTCCGGCAGCTTTTA  >  CP009273/1321103‑1321616

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.