New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 1422232	36 (0.900)	3 (0.080)	3/292	NT	7.8%	noncoding (820/1196 nt)	IS5	repeat region
	?	CP009273	= 1422351	37 (0.980)					noncoding (701/1196 nt)	IS5	repeat region

CTATTTTTTCCACCATTTCTGGCGTTATTTCCGGTTTTTACTGAGATCTCTCCCACTGACGTATCATTTGGTCCACCCGAAACAGGTTGGCCAGGGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGATCAGCCAGTCCACATCCACCTCGGCCAGCTCCTCGCGCTGTGGCGCTCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGAAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACCAGGCTGTGGGTCAGGCCACTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATC  >  CP009273/1421966‑1422503                                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                                                cTATTTTTTCCACCATTTCTGGCGTTATTTCCGGTTTTTACTGAGATCTCTCCCACTGACGTATCATTTGGTCCACCCGAAACAGGTTGGCCAGGGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACAAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCAACCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGGTTTGTTCTTTGGCGGAGTTNTCTTTAAGtttt                                                                                                                                                                                                                                                                           >  2:549146/1‑273 (MQ=17)                                 ggTTTTTACTGAGATCTCTGCCACTGACTTATCATTTGGTCCACCCGAAACAGGTTGGCCAGGGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTAGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGGAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGCTGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCACGGTTTTTACCTTGCCGTGACTCTCGGCGATCAGCCAGt                                                                                                                                                                                                                                          >  1:587902/1‑274 (MQ=255)                                           gggcactctcCCACTGCCGTATCATTTGGTCCCACCGAACCAGGTTGGCCAGGGTGAATACCATCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGATCAGCCAGTCCACATCCAcc                                                                                                                                                                                                                               <  2:237930/270‑1 (MQ=255)                                           gagaTCTCTCCCACTGTCGTATCATTTGGTCCACCCGAAACAGGTTGGCCAGGGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAGNCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGATCAGCCAGTCCACATCCAcc                                                                                                                                                                                                                               <  1:549157/275‑1 (MQ=255)                                             gaTCTCTCCCACTGACGTATCATTTGGTCCACCCGAAACAGGTTGGCCAGGGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGATCAGCCAGTCCACATCCACCt                                                                                                                                                                                                                              >  1:254406/1‑274 (MQ=255)                                               tctctcCCACTGACGTATCATTTGGTCCACCCGAAACAGGTTGGCCAGGGTGAATAACATCGCCAGTTGGCTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCTCTTGATGATGCGACACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCGGGGGGGCACGGGGCTGAGGAAGTCCACCTcccactc                                                                                                                                                                                                                             >  2:704277/1‑268 (MQ=14)                                                   tcCCACTGACGTATCATTTGGTCCACCCGAAACAGGTTGGCCAGGGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGATCAGCCAGTCCACATCCACCTCGGCCAg                                                                                                                                                                                                                       <  2:254403/275‑1 (MQ=255)                                                               aTCATTTGGTCCACCCGAAACAGTTTGGCCAGGGTGAATAACATCGCCAGTTGGTTATCGGTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAACCGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGTGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGATCAGCCAGTCCACATCCACCTCGGCCAGCTCCTCGCGCt                                                                                                                                                                                                            >  1:81984/1‑274 (MQ=255)                                                                                                    aTAACATCGTCAGTTGGTTTTCGTTTTTCAGTAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATTCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGTCGTTTTGTTCTTGCGCGGATTCTGCTTCAtggagaggagcaatttgtctcagccgatgccggctaccaaggagcgccacagcgcgaggagctggccgaggtggatgtggactggctgatcgccgagcgtcccggca                                                                                                                                                                      <  1:740075‑M1/275‑108 (MQ=255)                                                                                                    aTAACATCGCAAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGAGATCAGCCAGTCCACATCCACCTCGGCCAGCTCCTCGCGCTGTGGCGCTCCTTGGTAGCCGGCATCGGCGGCGACACAt                                                                                                                                                                      >  1:720668/1‑275 (MQ=255)                                                                                                         tttgcatgTTGGTTACCTTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATTATGCGAATCGGGGTCTCCACCCTTGCACTGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCCGGACGCTCGGCGATCAGCCAGTCCACATCCACCTCGGCCAGCTCCTCGCGCTGTGGCGCTCCTTGGTAGCCGGCATCGGCTGAGACAAATTGct                                                                                                                                                                  <  2:233222/267‑1 (MQ=14)                                                                                                          tCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCGCGGATGCTGGCTTTCATGTATTCGACGTTGATGGCCGTTTTGTTCTTGCGCGGCTTCTGCTTCAtggagaggatcaatttgtctcagccgatgccggctaccaaggagcgcaacagcgcgatgaactggcggaggtggaaggggactgactggacggcgggcggcccggcaaggtac                                                                                                                                                                >  2:740061‑M1/1‑162 (MQ=255)                                                                                                           cGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGATCAGCCAGTCCACATCCACCTCGGCAAGCTACTCGCGCTGTGGCGCTCCTTGGTAGCCGGCAACGGCTGAGAAAAATTGctcc                                                                                                                                                                >  1:233224/1‑274 (MQ=255)                                                                                                                              ttCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGATCAGCCAGTCCAAATCCACCGCGGCCAGCTCCTCGCGCCGTGGCGCTCCTTGGTAGCCACACTCGTCTGGTACAAATTGATCCCCGCTAtgaagcagatcac                                                                                                                                             <  1:279292‑M2/274‑14 (MQ=255)                                                                                                                                                  ggCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGATCAGCCAGTCCACATCCACCTCGGCCAGCTCCTCGCGCTGTGGCGCTCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGAAGCATATTACCCAACTGATTGAGGTCATGcc                                                                                                                        >  1:321050/1‑274 (MQ=255)                                                                                                                                                   gCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGATCAGCCAGTCCACATCCACCTCGGCCAGCTCCTCGCGCtgt                                                                                                                                                                                                          >  1:426482/1‑192 (MQ=255)                                                                                                                                                      ttCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCAtggagaggagcaatttgtctcagccgatgccggctaccaaggagcgccaca                                                                                                                                                                                                                              <  1:108229‑M1/169‑52 (MQ=255)                                                                                                                                                       tCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGATCAGCCAGTCCACATCCACCTCGGCCAGCTCCTCGCGCTGTGgcg                                                                                                                                                                                                      <  2:426475/192‑1 (MQ=255)                                                                                                                                                                     agCCTCTTGTTGTTGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTTTTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGNCGCTCGGCGATCAGCCAGTCCACATCCACCTCGGCCAGCTCCTCGCGCTGTGGCGCTCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGAAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGAc                                                                                                     <  1:623975/274‑1 (MQ=255)                                                                                                                                                                             gatgatGCGATACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGATCAGCCAGTCCACATCCACCTCGGCCAGCTCCTCGCGCTGTGGCGCTCCTTGGTAGCCGGCATCGGCt                                                                                                                                                                               <  1:443119/193‑1 (MQ=255)                                                                                                                                                                             gatgatGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGATCAGCCAGTCCACATCCACCTCGGCCAGCTCCTCGCGCTGTGGCGCTCCTTGGTAGCCGGCATCGGCTGAGCCAAATTGCTCCTCTCCATGAAGCAGATTACCCAGCTGATTGAGGACATGCTCGTTGGCCGCGGTGGTGACCAGGCtg                                                                                              >  1:44479/1‑274 (MQ=255)                                                                                                                                                                                                                     gCTTTCATGTATTCGTTGTTGATTACCGTGTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGATCACCCAGTCCACATCCACCTCGGCCAGCTCCTCCCGCTGTGGCGCTCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCAtga                                                                                                                                                       <  1:516217‑M2/177‑4 (MQ=255)                                                                                                                                                                                                                             gTATTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGATCAGCCAGTCCACATCCACCTCGGCCTGCTCCTCGCGCTGTGGCGCTCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGAAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACCAGGCTGTGGGTCAGGCCACTCTTGGCATCGACACGAATGTGGGCCTTCATGCCa                                              <  1:592857/274‑1 (MQ=38)                                                                                                                                                                                                                               aTTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGCTTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGATCAGCCAGTCCACATCCACCTCGGCCAGCTCCTCGCGCTGTGGCGCTCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGAAGCAGATTACCCAGCTNATTGAGGTNATGCTCGTTGGCCGCGGTGGTGACCGGGCTGTGGGTCAGGCCACACTTGGCATCGACACCAATGATGGCCTTCATGCCaaa                                            >  1:478014/1‑274 (MQ=255)                                                                                                                                                                                                                               aTTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTTGGCGAt                                                                                                                                                                                                                                                  >  2:303050/1‑76 (MQ=255)                                                                                                                                                                                                                               aTTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGATCAGCCAGTCCACATc                                                                                                                                                                                                                                   >  2:106273/1‑91 (MQ=255)                                                                                                                                                                                                                                   gATGTTGATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTTGGCGATCAGc                                                                                                                                                                                                                                              <  1:303055/76‑1 (MQ=255)                                                                                                                                                                                                                                   gATGTTGATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGATCAGCCAGTCCACATCCAcc                                                                                                                                                                                                                               <  1:106274/91‑1 (MQ=255)                                                                                                                                                                                                                                     tGTTGATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGATCAGCCAGTCCACATCCACCTCGGCCAGCTCCTCGCGCTGTGGCGCTCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGAAGCAGATTACCCAGc                                                                                                                                        >  2:169287/1‑176 (MQ=255)                                                                                                                                                                                                                                       ttGATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGATCAGCCAGTCCACATCCACCTCGGCCAGCTCCTCGCGCTGTGGCGCTCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGAAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACCAGGCTGTGGGTCAGGCCACTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCTACTg                                   <  1:5202/275‑1 (MQ=38)                                                                                                                                                                                                                                         gATGGCCGTTTTGTTGTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGATCAGCCAGTCCACATCCACCTCg                                                                                                                                                                                                                            >  1:518219/1‑88 (MQ=255)                                                                                                                                                                                                                                         gATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGATCAGCCAGTCCACATCCACCTCGGCCAGCTCCTCGCGCTGTGGCGCTCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGAAGCAGATTACCCAGCTGAt                                                                                                                                    <  1:169289/176‑1 (MQ=255)                                                                                                                                                                                                                                          aTGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGATCAGCCAGTCCACATCCACCTCGGCCAGCTCCTCGCGCTGTGGCGCTCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCa                                                                                                                                                          >  1:540638/1‑153 (MQ=255)                                                                                                                                                                                                                                             tccGTTTTGTTCTTGCGCTGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGATCAGCCAGTCCACATCCCCCNCGGCCAGCNCCTCGCGCTGTGACGCTCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGAAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACCAGGCTGTGGGTCAGGCCACTCTTGGCATCGACACCTATGTGGGACTTCATGCCAAAGTGCCACTGATTGc                              <  1:477997/273‑1 (MQ=255)                                                                                                                                                                                                                                             gCCGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGATCAGCCAGTCCACATCCACCTCGGCCa                                                                                                                                                                                                                        <  2:518210/88‑1 (MQ=255)                                                                                                                                                                                                                                              ccGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGATCAGCCAGTCCACATCCACCTCGGCCAGCTCCTCGCGCTGTGGCGCTCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCAtgaa                                                                                                                                                      >  2:540628‑M2/1‑149 (MQ=255)                                                                                                                                                                                                                                               cGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGATCAGCCAGTCCACATCCACCTCGGCCAGCTCCTCGCGCTGTGGCGCTCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGAAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACCAGGCTGTGGGTCAGGCCACTCTTGGCATCGACACCAATTTGGGCCTTCATGCCAAAGTGCCACTGATTGCCtt                           >  1:93765/1‑275 (MQ=38)                                                                                                                                                                                                                                               cGTTTTCTTCTTACGCGCATTCTGCTTCAAGGCTTTTACCTTGCCGCGACGCTCGGCGATCAGCCAGTCCACATCCACCTCGTTCATCTCCTCGCGCGGTGGCGCCCATTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGAAGCAGATTACCCAGCTGATTGAGGTCATGCTCGCTGGCACCAGCGTTGACCAGGCGGTGGGAGAGGCGACTCTTGGCATCGCAACGCATGTTGGCCTGCATGCCACAGCGCCACGGATGGCCtg                           >  2:19932/1‑274 (MQ=11)                                                                                                                                                                                                                                                      ttCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGATc                                                                                                                                                                                                                                                 >  1:27257/1‑54 (MQ=255)                                                                                                                                                                                                                                                          tGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGATCAGcc                                                                                                                                                                                                                                             <  2:27256/54‑1 (MQ=255)                                                                                                                                                                                                                                                           gcgcGGATTCTGCTTCCAGGTTTTTACCTTGCCGGGACGCTCGGCGATCAGCCAGTCCACATCCACCTCGGCCAGCTCCTCGCGCTGTGGCGCTCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGAAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACCAGGGTGTGGGTCAGGCCACTCTTGGCATCGACCCCAATGTGGGCCTACATGCCAAAGTGCCACTACTTGCCTTTCTTGGTCTGa                >  1:239561/1‑274 (MQ=255)                                                                                                                                                                                                                                                               gtgatctgcTTCAtagcggggatcaatttgtaccagacgagtgtggctaccaaggagcgccacggcgcgaggagctggccgcggtggatttggactggctgatcgccgagcgtcccggcaaggtaaaaaccttgaagcagaatccgcgcaagaacaaaacggccatcaacatcgaatacatgaaagccagcatccgtgccagggtggagcacccgtttcgcatcatcaagcggcagttcggcttcgtgaaagccagatacaaggggctgctgaa            <  1:279292‑M1/270‑262 (MQ=255)                                                                                                                                                                                                                                                               ggATTCTTCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGATCGGCCAGTCCACATCCACCTCGGCCAGCTCCTCGCGCTGTGGCGCTCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGAAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACCAGGCTGTGGGTCAGGCCACTCTTGGCAt                                                                        <  1:54125/214‑1 (MQ=255)                                                                                                                                                                                                                                                                     tGCTTCAtggagaggagcaatttgtctcagccgatgccggctaccaaggagcgccacagcgcgaggagctggccgaggtggatgt                                                                                                                                                                                                   >  1:571630‑M1/1‑7 (MQ=255)                                                                                                                                                                                                                                                                        ttCAtggagaggagcaatttgtctcagccgatgccggctaccaaggagcgccacagcgcgaggagctggccgaggtggatgtggactggctgatcgccgagcgtcccggcaaggtaaaaaccttgaagcagaatccgcgcaagaacaaaacgg                                                                                                                            >  2:540628‑M1/1‑4 (MQ=255)                                                                                                                                                                                                                                                                         tCAtggagaggagcaatttgtctcagccgatgccggctaccaaggagcgccacagcgggaggagctggccgaggtggatgtggactgggtgatcgccgagcgtcccggcaaggtaaaaaccttgaagcagaatccgcgcaagaacaacacggtaatcaacaacgaatacatgaaagc                                                                                                   <  1:516217‑M1/177‑175 (MQ=255)                                                                                                                                                                                                                                                                         tCAtggagaggagcaatttgtctcagccgatgccggctaccaaggagcgccacagcgcgaggagctggccgaggtggatgtggac                                                                                                                                                                                               >  1:233544‑M1/1‑3 (MQ=255)                                                                                                                                                                                                                                                                         tCAtggagaggagcaatttgtctcagccgatgccggctaccaaggagcgccacagcgcgaggagctggccgaggtggatgtggac                                                                                                                                                                                               <  2:571617‑M1/85‑83 (MQ=255)                                                                                                                                                                                                                                                                           aaGGTTTTTACCTTGCCGGGACGCTCGGCGATCAGCCAGTCCACATCCACCTCGGCCAGCTCCTCGCGCTGTGGCGCTCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGAAGCAGATTACCCAGCTGATTGAGGTCATGATCGGTGGCCGCGGTGGTGACCAGGCTGTGGGTCAGGCCACTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCATTTCTTGGTCTGATGCaacacgcaaac  >  1:601136/1‑262 (MQ=255)                                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                                                CTATTTTTTCCACCATTTCTGGCGTTATTTCCGGTTTTTACTGAGATCTCTCCCACTGACGTATCATTTGGTCCACCCGAAACAGGTTGGCCAGGGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGATCAGCCAGTCCACATCCACCTCGGCCAGCTCCTCGCGCTGTGGCGCTCCTTGGTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGAAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTGACCAGGCTGTGGGTCAGGCCACTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATC  >  CP009273/1421966‑1422503

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.