New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 2575558	34 (0.850)	3 (0.080)	3/296	NT	7.8%	coding (579/1044 nt)	ypfG	DUF1176 family protein
	?	CP009273	= 2575704	38 (0.990)					coding (433/1044 nt)	ypfG	DUF1176 family protein

ACCGAACCGGGCGCGAAGCTAGTGGCTTTTTACGCGACACAATCCATGCCAAATCAATGGTGTTATAGGCCCCTGCCTCACAGCTAATCATCATCAGCGCTTTATCATCAGTCAGCGCAGTGACATTCACCTCACGACGCAATGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGTTTCCATAATCCAGCAAATCGTTGCGTTCTTCGAGTGAGAGTGGCGTCGGCGTTGGGTTAACCACCGCGACCTCTTTCAGCGCAGGCGCGGGCGGTACGCTGAGCGGCGGTTCGTCCCCTTTCTTGATCCACGCGGTTTCACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAACAACGCTGCTTTTAAGCCACTCAGAGAAATGGTCTGATCGCCATCGCGTAAGGTGATTGCCTTCCCTTCCTGAATCATCTGCAAAAACGCGGTGATGGTTGCCGTATCATCGGTTACTAATAACCATGGTGAAATCCG  >  CP009273/2575335‑2575827                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                                              accgaaccgGGCGCGAAGCTAGTGGCTTTTTACGCGACACAATCCATGCCAAATCAATGGTGTTATAGGCCCCTGCCTCACAGCTAATCATCATCAGCGCTTTATCATCAGTCAGCGCAGTGACATTCACCTCACGACGCAATGGAACAAGCTAGCAGCGCAGACCATTCATCCGCCAGTTTCCATAATCCAGCAAATCGTTCCGTTCTTCGAGTGAGAGTGGCGTCGGCGTGGGGTTAACCACACCGACCTCTTTCAGCGCAGGCGCGGGCGGt                                                                                                                                                                                                                            >  1:647667/1‑275 (MQ=255)                                                     aTCAATGGTGTTATAGGCCCCTGCCTCACAGCTAATCATCATCAGCGCTTTATCATCAGTCAGCGCAGTGACATTCACCTCACGACGCAATGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGTTTCCATAATCCAGCAAATCGTTGCGTTCTTCGAGTGAGAGTGGCGTCGGCGTTGGGTTAACCACCGCGACCTCTTTCAGCGCCGGCGCGGGCGGTACGGTGAGCGGCGGTTCGGCCCCTTTCTTGCTCCACGCGGTTGCACTGCCaa                                                                                                                                                                        >  2:721798/1‑275 (MQ=255)                                                                       cccTGCCTCACAGCTAATCATCATCAGCGCTTTATCATCAGTCAGCGCAGTGACATTCACCTCACGACGCAATGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGTTTCCATAATCCAGCAAATCGTTGCGTTCTTCGAGTGAGAGTGGCGTCGGCGTTGGGTTAACCACCGCGACCTCTTTCCGCGCAGGCGCGGGCGGTACGCTGAGCGGCGGTTCGGCCCCTTTCTTGATCCACGCGGTTTCACTGCCAACGCGGTTTTGCGGAGCac                                                                                                                                                      >  1:182507/1‑274 (MQ=255)                                                                       cccTGCCTCACAGCTAATCATCATCAGCGCTTTATCATCAGTCAGCGCAGTGACATTCACCTCACGACGCAATGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGTTTCCATAATCCAGCAAATCGTTGCGTTCTTCGAGTGAGAGTGGCGTCGGCGTTGGGTTAACCACCGCGACCTCTTTCAGCGCAGGCGCGGGCGGTACGCTGAGCGGCGGTTCg                                                                                                                                                                                                          >  2:443423/1‑223 (MQ=255)                                                                       cccTGCCTCACAGCTAATCATCATCAGCGCTTTATCATCAGTCAGCGCAGTGACATTCACCTCACGACGCAATGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGTTTCCATAATCCAGCAAATCGTTGCGTTCTTCGAGTGAGAGTGGCGTCGGCGTTGGGTTAACCACCGCGACCTCTTTCAGCGCAGGCGCGGGCGGTACGCTGAGCGGCGGTTCGTCCCCTTTCTTGCTCCCCGCGGTTTCACTGCCAACGCGCTTTTTCTgcgtat                                                                                                                                                      >  2:199641/1‑270 (MQ=255)                                                                       cccTGCCTCACAGCTAATCATCATCAGCGCTTTATCATCAGTCAGCGCAGTGACATTCACCTCACGACGCAATGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGTTTCCATAATCCAGCAAATCGTTGCGTTCTTCGAGTGAGAGTGGCGTCGGCGTTGGGTTAACCACCGCGACCTCTTTCAGCGCAGGCGCGGGCGGTACGCTGAGCGGCGGTTCGTCCCCTTTCTTGATCCACGCGGTTTCACTTCCAAACCGCTTTTGcgtagcc                                                                                                                                                       >  1:354691/1‑268 (MQ=255)                                                                       cccTGCCTCACAGCTAATCATCATCAGCGCTTTATCATCAGTCAGCGCAGTGACATTCACCTCACGACGCAATGGATCAAGCGAGCAGCGCAGACAATTCATCCGCCAGTTTCCAT‑ATCCAGCAAATCGTTGCGTTCTTCGAGTGAGAGTGGCGTCGGCGTTGGGTTAACAACCGCGACCTCTTTCAGCGCAGGCGCGGGCGGTACGCTGAGCGGCGGTTCGTCCCCTTTCTTGCTCCACGCGGTTTCACTGCCAACGAGCTTTTGCTggacat                                                                                                                                                      >  1:450057/1‑269 (MQ=255)                                                                           gCCTCACAGCTAATCATCATCAGCGCTTTATCATCAGTCAGCGCAGTGACATTCACCTCACGACGCAATGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGTTTCCATAATCCAGCAAATCGTTGCGTTCTTCGAGTGAGAGTGGCGTCGGCGTTGGGTTAACCACCGCGACCTCTTTCAGCGCAGGCGCGGGCGGTACGCTGAGCGGCGGTTCGTccc                                                                                                                                                                                                      <  1:443430/223‑1 (MQ=255)                                                                                      annncgcagccgcgcTTTACCACCAGACCGCGCAGTACCAGTCACCGCACGACGCAATGGATCAAGCGAGCAGCGCAGACCAGTCATCCGCCAGTTTCCATAATCCAGCAAGTCGTTGCGGTCTTCGAGTGAGAGTGGCGGCGGCGTGGGGTGAACCACCGCGACCTCTTTCAGCGCAGGCGCGGGCGGTACGCTGAGCGGCGGTTCGTCCCCTTTCTTGATCCACGCGGTTTCACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAACAACg                                                                                                                                       <  2:182505/264‑1 (MQ=255)                                                                                            catcaGCGCTTTATCATCAGTCAGCGCAGTGACATTCACCTCACGACGCAATGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGTTTCCATAATCCAGCAAATCGTTGCGTTCTTCGAGTGAGAGTGGCGTCGGCGTTGGGTTAACCANCGCGACCTCTTTCAGCGCAGGCGCGGGCGGTACGCTGAGCGGCGGTTCGTCCCCTTTCTTGATCCACGCGGTTTTACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAAAAACCCTGCtt                                                                                                                                 >  1:629179/1‑275 (MQ=255)                                                                                              tcaGCGCTTTATCATCAGTCAGCGCAGTGACATTCACCTCACGACGCAATGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGTTTCCATAATCCAGCAAATCGTTGCGTTCTTCGAGTGAGAGTGGCGTCGGCGTTGGGTTAACCACCGCGACCTCTTTCAGCGCAGGCGCGGACGGTACGCTGAGCGGCGGTTCGTCCCCTTTCTTGCTCCACGCGGTTTCACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAACAACGCTGCtttt                                                                                                                               >  1:394322/1‑275 (MQ=255)                                                                                                      ttATCATCAGTCAGCGCAGTGACATTCACCTCACGACGCAATGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGTATCCATAATCCAGCAAATCGTTGCGTTCTTCGAGTGAGAGTGGCGTCGGCGTTGGGTTAACCACCGCGACCTCTTTCAGCGCAGGCGCGGGCGGTACGCTGAGCGGCGGTTCGTCCCCTTTCTTGATCCACGCGGTTTCACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAACAACGCTGCTATTAAgccact                                                                                                                       >  1:721812‑M2/1‑269 (MQ=255)                                                                                                                    cgcAGTGACATTCACCTCACGACGCAATGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGTTTCCATAATCCAGCAAATCGTTGCGTTCTTCGAGTGAGAGTGGCGTCGGCGTTGGGTTAACCACCGCGACCTCTTTCAGCGCAGGCGCGGGCGGTACGCTGAGCGGCGGTTCGTCCCCTTTCTTGATCCACGCGGTTTCACTGCCAACGCGCTTTTGCTGCGCATCAATAAACAACAACGCTGCTTTTAAGCCACTCAGAGAAATGGTCt                                                                                                         >  1:297767/1‑275 (MQ=255)                                                                                                                                 aaattacgacgCAATGGATCACGCGCGCAGCGCAGTCCTTTCCTCCGCCTGTTTCCCTAATCCAGCAAATCGTTGCGTTCTTCGAGGGAGAGTTGCGTCGGCGTTGGGTTAACCACCGCGACCTCTTTCAGCGCAGGCGCGGGCGGTACGCTGAGCGTCGGTTCGTCCCCTTTCTTGATCCACGCGGTTTCACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAACAACGCTGCTTTTAAGCCACTCAGAGAAATGGTCTGATCGCCATcgcg                                                                                            <  2:629165/270‑1 (MQ=255)                                                                                                                                             aaTGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGTTTCCATAATCCAGCAAATCGTTGCGTTCTTCGAGTGAGAGTGGCGTCGGCGTTGGGTTAACCACCGCGACCTCTTTCAGCGCAGGCGCGGGCGGTACGCTGAGCGGCGGTTCGTCCCCTTTCTTGATCCACGCGGTTTCACTGCCAACGCGCTTTTGCTGAGCATc                                                                                                                                                     >  1:377614/1‑206 (MQ=255)                                                                                                                                             aaTGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGTTTCCATAATCCAGCAAATCGTTGCGTTCTTCGAGTGAGAGTGGCGTCGGCGTTGGGTTAACCACCGCGACCTCTTTCAGCGCAGGCGCGGGCGGTACGCTGAGCGGCGGTTCGTCCCCTTTCTTGATCCACGCGGTTACACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAACAACGCTGCTTTTAAGCCACTCAGAGAAATGGTCTGATCGCCATCGCGTAAGGTGATTg                                                                                 >  1:377556/1‑274 (MQ=255)                                                                                                                                                 gATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGTTTCCATAATCCAGCAAATCGTTGCGTTCTTCGAGTGAGAGTGGCttaaaagcagcgttgttgtttattgatgctcagcaaaagcgcgttggcagtgaaaccgcgtggatcaa                                                                                                                                                                                                           >  1:388740‑M1/1‑80 (MQ=255)                                                                                                                                                 gATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGTTTCCATAATCCAGCAAATCGTTGCGTTCTTCGAGTGAGAGTGGCGTCGGCGTTGGGTTAACCACCGCGACCTCTTTCAGCGCAGGCGCGGGCGGTACGCTGAGCGGCGGTTCGTCCCCTTTCTTGATCCACGCGGTTTCACTGCCAACGCGCTTTTGCTGAGCATCAATa                                                                                                                                                 <  2:377607/206‑1 (MQ=255)                                                                                                                                                    cAAGCGAGCAGCGCAGACCATTCATCCGCCAGTTTCCATAATCCAGCAAATCGTTGCGTTCTTCGAGTGAGAGTGGCGTCgg                                                                                                                                                                                                                                                                          >  1:323409/1‑82 (MQ=255)                                                                                                                                                     aaGCGAGCAGCGCAGACCATTCATCCGCCAGTTTCCATAATCCAGCAAATCGTTGCGTTCTTCGAGTGAGAGTGGCttaaaagcagcgttgttgtttattgatgctcagcaaaagcgcgttggcagtgaaaccgcgtggatcaagaaa                                                                                                                                                                                                       <  2:388733‑M1/148‑73 (MQ=255)                                                                                                                                                     aaGCGAGCAGCGCAGACCATTCATCCGCCAGTTTCCATAATCCAGCAAATCGTTGCGTTCTTCGAGTGAGAGTGGCGTCGGCGTTGGGTTAACCACCGCGACCTCTTTCAGCGCAGGCGCGGGCGGTACGCTGAGCGGCGGTTCGTCCCCTTTCTTGATCCACGCGGTTTCACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAACAACGCTGCTTTTAAGCCACTCAGAGAAATGGTCTGATCGcc                                                                                                  >  1:167325/1‑249 (MQ=255)                                                                                                                                                        cGAGCGGCGCAGACCATTCATCCGCCAGTTTCCATAATCCAGCAAATCGTTGCGTTCTTCGAGTGAGAGTGGCGTCGGCGtt                                                                                                                                                                                                                                                                      <  2:323403/82‑1 (MQ=255)                                                                                                                                                         gAGCAGCGCAGACCATTCATCCGCCAGTTTCCATAATCCAGCAAATCGTTGCGTTCTTCGAGTGAGAGTGGCttaaaagcagcgttgttgtttattgatgctcagcaaaagcg                                                                                                                                                                                                                                      >  1:607522‑M1/1‑72 (MQ=255)                                                                                                                                                         gAGCAGCGCAGACCATTCATCCGCCAGTTTCCATAATCCAGCAAATCGTTGCGTTCTTCGAGTGAGAGTGGCGTCGGCGTTGGGTTAACCACCGCGACCTCTTTCAGCGCAGGCGCGGGCGGTACGCTGAGCGGCGGTTCGTCCCCTTTCTTGATCCACGCGGTTTCACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAACAACGCTGCTTTTAAGCCACTCAGAGAAATGGTCTGATCGCCATcg                                                                                              <  2:167323/249‑1 (MQ=255)                                                                                                                                                                         tCATCCGTCAGTTTCCCTAATCTAGCAAATAGTTGCGTTCTTCGGGTGAGAGTGGCGTCGGCGTTGGGTTAATCACCGCGACGTCTTTCAGCGCAGGCGCGGGTGGTACGCTGCGCGGCGCTTCGTCCCCTTTCTTGATACCCGCGGTTTCACTGCCAACGCGCTTTTGCTGACCATCAATAAAAACCAACGCCGCTTTTAATCCACTCACAGAAAAGGTACGATAGCCACCGCGTCCGGTGATTGCCTTCCCTTCCTGANTCACCTTCaacac                                                     >  2:536599/1‑271 (MQ=255)                                                                                                                                                                         tCATCCGCCAGTTTCCATAATCCAGCAAATCGTTGCGTTCTTCGAGTGAGAGTGGCGTCGGCGTTGGGTTAACCACCGCGACCTCTTTCAGCGCAGGCGCGGGCGGTACGCTGAGCGGCGGTTCGTCCCCTTTCTTGATCCACGCGGTTTCACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAACAACGATGCTTTTAAGCCACTCAGAGAAATGGTTTGATCGCCATCGCGTAAGGTGATTGCCTTCCCTTCCTGCATCATCTGCaaaac                                                     >  1:341429/1‑273 (MQ=255)                                                                                                                                                                                    tttCCATAATCCAGCAAATCGTTGCGTTCTTCGAGTGAGAGTGGCGTCGGCGTTGGGTTAACCACCGCGACCTCTTTCAGCGCAGGCGCGGGCGGTACGCTGAGCGGCGGTTCGTCCCCTTTCTTGATCCGCGCGGTTTCACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAACAACGCTGCTTTTAAGCCACTCAGAGAAATGGTCTGATCGCCATCGCGTAAGGTGATTGCCTTCCCTTCCTGAATCATCTGCAAAAACGCGGTGATGGt                                         <  1:199643/275‑1 (MQ=255)                                                                                                                                                                                                  cAAATCGTTGCGTTCTTCGAGTGAGAGTGGCGTCGGCGTTGGGTTAACCACcg                                                                                                                                                                                                                                                         >  1:75919/1‑53 (MQ=255)                                                                                                                                                                                                   taaTCGTTGCGGTCTTCCAGGGAGTGTCGCCTCGCCCTTGCGTTACCCACCGCGACCTCTTTCAGCGCATGCGCGGGCGGTACGCTGAGCGGCTGTTCTTCCCCGTTCTTTATACACGCTGTTTCACTTCCAACGCGCTTTTGCTAAGCATCAATAAACAACAACGCTGCTTTTAAGCCACTCAGAGAAATGGTCTTATCGCCATCGCGTAAGGTGATTGCCTTCCCTTCCGGAATCATCTGCAAAAACGCGGTGATGGTTGCCGTATCATCggg                          <  2:341423/274‑2 (MQ=255)                                                                                                                                                                                                      tCGTTGCGTTCTTCGAGTGAGAGTGGCGTCGGCGTTGGGTTAACCACCGCGAc                                                                                                                                                                                                                                                     <  2:75918/53‑1 (MQ=255)                                                                                                                                                                                                       cGTTGCGTTCTTCGAGTGAGAGTGTGGTCGGCGTTGGGTTAACCACCGCGACCTCTTTCAGCGCAGGCGCGGGCGGTACGCTGAGCGGCGGNTCGTCCCCTTTCTTGATCCACGCGGTTTCACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAACAACGCTGCTTTTAAGCCACTCAGAGAAATGGTCTGATCGCCATCGCGTAAGGTGATTGCCTTCCCTTCCTGAACCATCGGCAAAAACGTGGTGATGGTTGCCATATCATCGGTTACt                      <  1:536609/275‑1 (MQ=255)                                                                                                                                                                                                           gCGTTCTTCGAGTGAGAGTGGCGTCGGCGTTGGGTTAACCACCGCGACCTCTTTCAGCGCAGGCGCGGGCGGTACGCTGAGCGGCGGTTCg                                                                                                                                                                                                          >  1:637634/1‑91 (MQ=255)                                                                                                                                                                                                           gCGTTCTTCGAGTGAGAGTGGCGTCGGCGTTGGGTTAACCACCGCGACCTCTTTCAGCGCAGGCGCGGGCGGTACGCTGAGCGGCGGTTCGTCCCCTTTCTTGATCCACGCGGTTTCACTGcc                                                                                                                                                                          >  2:676/1‑123 (MQ=255)                                                                                                                                                                                                               tcttcGAGTGAGAGTGGCGTCGGCGTTGGGTTAACCACCGCGACCTCTTTCAGCGCAGGCGCGGGCGGTACGCTGAGCGGCGGTTCGTccc                                                                                                                                                                                                      <  2:637620/91‑1 (MQ=255)                                                                                                                                                                                                               tcttcGAGTGAGAGTGGCGTCGGCGTTGGGTTAACCACCGCGACCTCTTTCAGCGCAGGCGCGGGCGGTACGCTGAGCGGCGGTTCGTCCCCTTTCTTGATCCACGCGGTTTCACTGCCAAcg                                                                                                                                                                      <  1:676/123‑1 (MQ=255)                                                                                                                                                                                                                cttcGAGTGAGATTGGCGTCGGCGTTGGGTTAACCACCGCGACCTCTTTCAGCGCAGGCGCGGGCGGTACGCTGAGCGGCGGTTCGTCCCCTTTCTTGATCCACGCGGTTTCACTGCCAACGCGCTTTTGCTGAGCATCAATGAACAACAACg                                                                                                                                       <  1:716839/153‑1 (MQ=255)                                                                                                                                                                                                                         agagTGGCGTCGGCGTTGGGTTAACCACCGCGACCTCTTTCAGCGCAGGCGCGGGCGGTACGCTGAgcggcg                                                                                                                                                                                                               >  2:646960/1‑72 (MQ=255)                                                                                                                                                                                                                         agagTGGCGTCGGCGTTGGGTTAACCACCGCGACCTCTTTCAGCGCAGGCGCGGGCGGTACGCTGAGCGGCGGTTCGTCCCCTTTCTTGATCCACGCGGTTTCACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAACAACGCTGCTTTTAAGCCACTCAGAGAAATGGTCTGATCGCCATCGCGTAAGGTGATTGCCTTCCCTTCCTGAATCATCTGCAAAAACGCGGTGATGGTTGCCGTATCATCGGTTACTAATAACCCTgtctatta     >  1:433962/1‑267 (MQ=255)                                                                                                                                                                                                                           agTGGCttaatagcagcgttgttgtttattgatgctcagcaaaagcgcgttggcagtgaaaccgcgtggatcaagaaaggggacgaaccgccgctcagcgtaccgcccgcgcctgcgctgaaagaggtcgcggtggttaacccaacgccgacgccactctcactcgaagaacgcaacgatttgctggattatggatactggcggatgaatggtctgcgctgctcgcttgatccattgcgtcgtgaggtgaatgtcactgcgctgactgatgataa  >  1:721812‑M1/1‑6 (MQ=255)                                                                                                                                                                                                                           agTGGCGTCGGCGTTGGGTTAACCACCGCGACCTCTTTCAGCGCAGGCGCGGGCGGTACGCTGAGCGGCGGTTCGTCCCCTTTCTTGATCCACGCGGTTTCACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAACAACGCTGCTTTTAAGCCACTCAGAGAAATGGTCTGAt                                                                                                      >  2:1826/1‑175 (MQ=255)                                                                                                                                                                                                                             tGGCGTCGGCGTTGGGTTAACCACCGCGACCTCTTTCAGCGCAGGCGCGGGCGGTACGCTGAGCGGCGGTTc                                                                                                                                                                                                           <  1:646974/72‑1 (MQ=255)                                                                                                                                                                                                                               gCGTCGGCGTTGGGTTAACCACCGCGACCTCTTTCAGCGCAGGCGCGGGCGGTACGCTGAGCGGCGGTTCGTCCCCTTTCTTGATCCACGCGGTTTCACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAACAACGCTGCTTTTAAGCCACTCAGAGAAATGGTCTGATCGcc                                                                                                  <  1:1826/175‑1 (MQ=255)                                                                                                                                                                                                                                cGTCGGCGTTGGGTTAACCACCGCGACCTCTTTCAGCGCAGGCGCGGGCGGTACGCTGAg                                                                                                                                                                                                                    >  2:147028/1‑60 (MQ=255)                                                                                                                                                                                                                                cGTCGGCGTTGGGTTAACCACCGCGACCTCTTTCAGCGCAGGCGCGGGCGGTACGCTGAGCGGCGGTTCGTCCCCTTTCTTGATCCACGCGGTTTCACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAACAACGCTGCTTTTAAGCCACTCAGAGAAATGGTCTGATCGCCATCGCGTAAGGTGATTGCCTTCCCTTCCTGAATCATCTGCAAAAACGCGGTGATg                                           >  1:3974/1‑229 (MQ=255)                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                                              ACCGAACCGGGCGCGAAGCTAGTGGCTTTTTACGCGACACAATCCATGCCAAATCAATGGTGTTATAGGCCCCTGCCTCACAGCTAATCATCATCAGCGCTTTATCATCAGTCAGCGCAGTGACATTCACCTCACGACGCAATGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGTTTCCATAATCCAGCAAATCGTTGCGTTCTTCGAGTGAGAGTGGCGTCGGCGTTGGGTTAACCACCGCGACCTCTTTCAGCGCAGGCGCGGGCGGTACGCTGAGCGGCGGTTCGTCCCCTTTCTTGATCCACGCGGTTTCACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAACAACGCTGCTTTTAAGCCACTCAGAGAAATGGTCTGATCGCCATCGCGTAAGGTGATTGCCTTCCCTTCCTGAATCATCTGCAAAAACGCGGTGATGGTTGCCGTATCATCGGTTACTAATAACCATGGTGAAATCCG  >  CP009273/2575335‑2575827

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.