New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | CP009273 | = 2575558 | 34 (0.850) | 3 (0.080) | 3/296 | NT | 7.8% | coding (579/1044 nt) | ypfG | DUF1176 family protein |
? | CP009273 | = 2575704 | 38 (0.990) | coding (433/1044 nt) | ypfG | DUF1176 family protein |
TTATCATCAGTCAGCGCAGTGACATTCACCTCACGACGCAATGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGTTTCCATAATCCAGCAAATCGTTGCGTTCTTCGAGTGAGAGTGGCGTCGGCGTTGGGTTAACCACCGCGACCTCTTTCAGCGCAGGCGCGGGCGGTACGCTGAGCGGCGGTTCGTCCCCTTTCTTGATCCACGCGGTTTCACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAACAACGCTGCTTTTAAGCCACTCAGAGAAATGGTCTGATCGCCATCGCGTAAGGTGATTGCCTTCCCTTCCTGAATCATCTGCAAAAACGCGGTGATGGTTGCCGTATCATCGGTTACTAATAACCATGGTGAAATCCGCCACTTGTCACCACTTAACGCCAACGGCTCGCCATCTAACAGCAGCCGTGGCGCTATCTCCCCTTCTGACGCCTCCGGCGACTTCAATCCGCCGCGCTCAATACGTAAAACGGCATCGGTATGCGCCCCGGCGCTGCGGCTCAGGGTCAT > CP009273/2575436‑2575977 | ttATCATCAGTCAGCGCAGTGACATTCACCTCACGACGCAATGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGTATCCATAATCCAGCAAATCGTTGCGTTCTTCGAGTGAGAGTGGCGTCGGCGTTGGGTTAACCACCGCGACCTCTTTCAGCGCAGGCGCGGGCGGTACGCTGAGCGGCGGTTCGTCCCCTTTCTTGATCCACGCGGTTTCACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAACAACGCTGCTATTAAgccact > 1:721812‑M2/1‑269 (MQ=255) cgcAGTGACATTCACCTCACGACGCAATGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGTTTCCATAATCCAGCAAATCGTTGCGTTCTTCGAGTGAGAGTGGCGTCGGCGTTGGGTTAACCACCGCGACCTCTTTCAGCGCAGGCGCGGGCGGTACGCTGAGCGGCGGTTCGTCCCCTTTCTTGATCCACGCGGTTTCACTGCCAACGCGCTTTTGCTGCGCATCAATAAACAACAACGCTGCTTTTAAGCCACTCAGAGAAATGGTCt > 1:297767/1‑275 (MQ=255) aaattacgacgCAATGGATCACGCGCGCAGCGCAGTCCTTTCCTCCGCCTGTTTCCCTAATCCAGCAAATCGTTGCGTTCTTCGAGGGAGAGTTGCGTCGGCGTTGGGTTAACCACCGCGACCTCTTTCAGCGCAGGCGCGGGCGGTACGCTGAGCGTCGGTTCGTCCCCTTTCTTGATCCACGCGGTTTCACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAACAACGCTGCTTTTAAGCCACTCAGAGAAATGGTCTGATCGCCATcgcg < 2:629165/270‑1 (MQ=255) aaTGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGTTTCCATAATCCAGCAAATCGTTGCGTTCTTCGAGTGAGAGTGGCGTCGGCGTTGGGTTAACCACCGCGACCTCTTTCAGCGCAGGCGCGGGCGGTACGCTGAGCGGCGGTTCGTCCCCTTTCTTGATCCACGCGGTTACACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAACAACGCTGCTTTTAAGCCACTCAGAGAAATGGTCTGATCGCCATCGCGTAAGGTGATTg > 1:377556/1‑274 (MQ=255) aaGCGAGCAGCGCAGACCATTCATCCGCCAGTTTCCATAATCCAGCAAATCGTTGCGTTCTTCGAGTGAGAGTGGCGTCGGCGTTGGGTTAACCACCGCGACCTCTTTCAGCGCAGGCGCGGGCGGTACGCTGAGCGGCGGTTCGTCCCCTTTCTTGATCCACGCGGTTTCACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAACAACGCTGCTTTTAAGCCACTCAGAGAAATGGTCTGATCGcc > 1:167325/1‑249 (MQ=255) gAGCAGCGCAGACCATTCATCCGCCAGTTTCCATAATCCAGCAAATCGTTGCGTTCTTCGAGTGAGAGTGGCGTCGGCGTTGGGTTAACCACCGCGACCTCTTTCAGCGCAGGCGCGGGCGGTACGCTGAGCGGCGGTTCGTCCCCTTTCTTGATCCACGCGGTTTCACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAACAACGCTGCTTTTAAGCCACTCAGAGAAATGGTCTGATCGCCATcg < 2:167323/249‑1 (MQ=255) tCATCCGTCAGTTTCCCTAATCTAGCAAATAGTTGCGTTCTTCGGGTGAGAGTGGCGTCGGCGTTGGGTTAATCACCGCGACGTCTTTCAGCGCAGGCGCGGGTGGTACGCTGCGCGGCGCTTCGTCCCCTTTCTTGATACCCGCGGTTTCACTGCCAACGCGCTTTTGCTGACCATCAATAAAAACCAACGCCGCTTTTAATCCACTCACAGAAAAGGTACGATAGCCACCGCGTCCGGTGATTGCCTTCCCTTCCTGANTCACCTTCaacac > 2:536599/1‑271 (MQ=255) tCATCCGCCAGTTTCCATAATCCAGCAAATCGTTGCGTTCTTCGAGTGAGAGTGGCGTCGGCGTTGGGTTAACCACCGCGACCTCTTTCAGCGCAGGCGCGGGCGGTACGCTGAGCGGCGGTTCGTCCCCTTTCTTGATCCACGCGGTTTCACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAACAACGATGCTTTTAAGCCACTCAGAGAAATGGTTTGATCGCCATCGCGTAAGGTGATTGCCTTCCCTTCCTGCATCATCTGCaaaac > 1:341429/1‑273 (MQ=255) tttCCATAATCCAGCAAATCGTTGCGTTCTTCGAGTGAGAGTGGCGTCGGCGTTGGGTTAACCACCGCGACCTCTTTCAGCGCAGGCGCGGGCGGTACGCTGAGCGGCGGTTCGTCCCCTTTCTTGATCCGCGCGGTTTCACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAACAACGCTGCTTTTAAGCCACTCAGAGAAATGGTCTGATCGCCATCGCGTAAGGTGATTGCCTTCCCTTCCTGAATCATCTGCAAAAACGCGGTGATGGt < 1:199643/275‑1 (MQ=255) taaTCGTTGCGGTCTTCCAGGGAGTGTCGCCTCGCCCTTGCGTTACCCACCGCGACCTCTTTCAGCGCATGCGCGGGCGGTACGCTGAGCGGCTGTTCTTCCCCGTTCTTTATACACGCTGTTTCACTTCCAACGCGCTTTTGCTAAGCATCAATAAACAACAACGCTGCTTTTAAGCCACTCAGAGAAATGGTCTTATCGCCATCGCGTAAGGTGATTGCCTTCCCTTCCGGAATCATCTGCAAAAACGCGGTGATGGTTGCCGTATCATCggg < 2:341423/274‑2 (MQ=255) cGTTGCGTTCTTCGAGTGAGAGTGTGGTCGGCGTTGGGTTAACCACCGCGACCTCTTTCAGCGCAGGCGCGGGCGGTACGCTGAGCGGCGGNTCGTCCCCTTTCTTGATCCACGCGGTTTCACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAACAACGCTGCTTTTAAGCCACTCAGAGAAATGGTCTGATCGCCATCGCGTAAGGTGATTGCCTTCCCTTCCTGAACCATCGGCAAAAACGTGGTGATGGTTGCCATATCATCGGTTACt < 1:536609/275‑1 (MQ=255) agagTGGCGTCGGCGTTGGGTTAACCACCGCGACCTCTTTCAGCGCAGGCGCGGGCGGTACGCTGAGCGGCGGTTCGTCCCCTTTCTTGATCCACGCGGTTTCACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAACAACGCTGCTTTTAAGCCACTCAGAGAAATGGTCTGATCGCCATCGCGTAAGGTGATTGCCTTCCCTTCCTGAATCATCTGCAAAAACGCGGTGATGGTTGCCGTATCATCGGTTACTAATAACCCTgtctatta > 1:433962/1‑267 (MQ=255) agTGGCGTCGGCGTTGGGTTAACCACCGCGACCTCTTTCAGCGCAGGCGCGGGCGGTACGCTGAGCGGCGGTTCGTCCCCTTTCTTGATCCACGCGGTTTCACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAACAACGCTGCTTTTAAGCCACTCAGAGAAATGGTCTGAt > 2:1826/1‑175 (MQ=255) gCGTCGGCGTTGGGTTAACCACCGCGACCTCTTTCAGCGCAGGCGCGGGCGGTACGCTGAGCGGCGGTTCGTCCCCTTTCTTGATCCACGCGGTTTCACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAACAACGCTGCTTTTAAGCCACTCAGAGAAATGGTCTGATCGcc < 1:1826/175‑1 (MQ=255) cGTCGGCGTTGGGTTAACCACCGCGACCTCTTTCAGCGCAGGCGCGGGCGGTACGCTGAGCGGCGGTTCGTCCCCTTTCTTGATCCACGCGGTTTCACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAACAACGCTGCTTTTAAGCCACTCAGAGAAATGGTCTGATCGCCATCGCGTAAGGTGATTGCCTTCCCTTCCTGAATCATCTGCAAAAACGCGGTGATg > 1:3974/1‑229 (MQ=255) ggCGTTGGGTTAACCACCGCGAACTCTTTCAGCGCAGGCGCGGGCGGTACGCTGAGCGGCGGTTCGTCCCCTTTCTTGATCCACGCGGTTTCACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAACAACGCTGCTTTTAAGCCACTCAGAGAAATGGTCTGATCGCCATCGCGTAAGGTGATTGCCTTCCCTTCCTGAATCATCTGCAAAAACGCGGTGATGGTTg < 2:3974/229‑1 (MQ=255) cgcgACCTCTTTCAGCGCAGGCGCGGGCGGTACGCTGAGCGGCGGTTCGTCCCCTTTCTTGATCCACGCGGTTTCACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAACAACGCTGCTTTTAAGCCACTCAGAGaaa > 2:582780/1‑140 (MQ=255) gACCTCTTTCAGGGCAGGCGCGGGCGGTACGCTGAGCGGCGGTTCGTCCCCTTTCTTGATCCACGCGGTTTCACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAACAACGCTGCTTTTAAGCCACTCAGAGAAATGGTCTGATCGCCATCGCGTAAGGTGATTGCCTTCCCTTCCTGAATCATCTGCAAAAACGCGGTGATGGTTGCCGTATCATCGGTTACTAATAACCATGGTGAAATCCGCCACTTGTCACCACTTAACGCCAACGGCt < 1:358210/275‑1 (MQ=255) aCCTCTTTCAGCGCAGGCGCGGGCGGTACGCTGAGCGGCGGTTCGTCCCCTTTCTTGATCCACGCGGTTTCACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAACAACGCTGCTTTTTAGCCACTCAGAGAAATGGt < 1:582793/140‑1 (MQ=255) cgcAGGCGCGGGCGGTACGCTGAGCGGCGGTTCGTCCCCTTTCTTGATCCACGCGGTTTCACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAACAACGCTGCTTTTAAGCCACTCAGAGAAATGGTCTGATCGCCATCGCGTAAGGTGATTGCCTTCCCTTCCTGAATCATCTGCAAAAACGCGGTGATGGTTGCCGTATCATCGGTTACTAATAACCATGGTGAACTCCGCCACTTGTCACCACTTAACGCAAACGGCTCGCCAACTcaca > 1:89249/1‑275 (MQ=255) cAGGCGCGGGCGGTACGCTGAGCGGCGGTTCGTCCCCTTTCTTGATCCACGCGGTTTCACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAACAACGCTGCTTTTAAGCCACTCAGAGAAATGGTCTGATCGCCATCGCGTAAGGTGATTGCCTTCCCTTCCTGAATCATCTGCAAAAACGCGGTGATGGTTGCCGTATCATCGGTTACTAATAACCATGGTGAAATCCGCCACTTGTCACCACTTAACGCCAACGGCTCGCCATCTAAcagc < 2:297762/275‑1 (MQ=255) gggggcggTAANTNGAGAGGGGTTTANTTACCGTTCTTGATCAATGNGGTTTCACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAACAACGCTGCTGTTAAGCCACTCAGAGAAATGGTCTGATCGCCATCGCGTAAGGTGATTGCCTTCCCTTCCTGAATCATCTGCAAAAACGCGGTGATGGTTGCCGTATCATCGGTTACTAATAACCATGGTGAAATCCGCCACTTGTCACCACTTAACGCCAACGGCTCGCCATCTAACagcagcag < 2:394315/273‑3 (MQ=255) tttCTTGATCCACGCGGTTTCACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAACAACGCTGCTTTTAAgccactctcactcgaagaacgcaacgatttgctggattatggaaactggcggatgaatggtctgcgctgctcgctt < 2:388733‑M2/148‑77 (MQ=255) ttGATCCACGCGGTTTCACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAACAACGCTGCTTTTAAgccactctcactcgaagaacgcaacgatttgctggattatggaaactggcggatgaatggtctgcgctgctcgcttgatc > 1:388740‑M2/1‑68 (MQ=255) cACGCGGTTTCACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAACAACGCTGCTTTTAAGCCACTCAGAGAAATGGTCTGATCGCCATCGCGTAAGGTGATTGCCTTCCCTTCCTGAATCATCTGCAAAAACGCGGTGATGGTTGCCGTATCATCGGTTACTAATAACCATAGTCAAATCCGCCACTTGTCACCACTTAACGCCAACGGCTCGCCATCTAACAGCAGCAGTGGCGCTACCTCCCCTTCTCCCGCCTccgccgccctccat > 2:610350/1‑265 (MQ=255) cgcgGTTTCACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAACAACGCTGCTTTTAAGCCCCTCAGAGAAATGGTCTGATCGCCATCGCGTAAGGTGATTGCCTTCCCTTCCTGAATCATCTGCAAAAACGCGGTGATGGTTGCCGTATCATCGGTTACTAATAACCATGGTGAAATCCGCCACTTg > 1:458030/1‑190 (MQ=255) cgcgGTTTCACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAACAACGCTGCTTTTAAGCCACTCAGAGAAATg > 1:2151/1‑76 (MQ=255) cgcgGTTTCACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAACAACGCTGCTTTTAAGCCACTCAGAGAAATGGTCTGATCGCCATCGCGTAAGGTGATTg > 2:206738/1‑104 (MQ=255) cgcgGTTTCACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAACAACGCTGCTTTTAAGCCACTCAGAGAAATGGTCTGATCGCCATCGCGTAAGGTGATTGCCTTCCCTTCCTGAATCATCTGCAAAAACGCGGTGa > 2:481955/1‑140 (MQ=255) cgcgGTTTCACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAACAACGCTGCTTTTAAGCCACTCAGAGAAATGGTCTGATCGCCATCGCGTAAGGTGATTGCCTTCCCTTCCTGAATCATCTGCAAAAACGCGGTGATGGTTGCCGTATCATCGGTTAc > 2:579868/1‑162 (MQ=255) cgcgGTTTCACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAACAACGCTGCTTTTAAGCCACTCAGAGAAATGGTCTGATCGCCATCGCGTAAGGTGATTGCCTTCCCTTCCTGAATCATCTGCAAAAACGCGGTGATGGTTGCCGTATCATCGGTTACTAATAACCATGGTGAAATCCGCCACTTGTCACCACTTAACGCCAACGACTCGCCATCTAACAGCAGCCACTGCCCTATCTCCCCTCCTGCCGCCTCCGCCGCCTCCAAccccc > 2:667870/1‑273 (MQ=255) gTTTCACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAACAACGCTGCTTTTAAGCCACTCAGAGAAATGGTCt < 2:2151/76‑1 (MQ=255) gTTTCACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAACAACGCTGCTTTTAAGCCACTCAGAGAAATGGTCTGATCGCCATCGCGTAAGGTGATTGcctt < 1:206740/104‑1 (MQ=255) gTTTCACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAACAACGCTGCTTTTAAGCCACTCAGAGAAATGGTCTGATCGCCATCGCGTAAGGTGATTGCCTTCGCTTCCTGAATCATCTGCAAAAACGCGGTGATGGt < 1:481964/140‑1 (MQ=255) gTTTCACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAACAACGCTGCTTTTAAGCCACTCAGAGAAATGGTCTGATCGCCATCGCGTAAGGTGATTGCCTTCCCTTCCTGAATCATCTGCAAAAACGCGGTGATGGTTGCCGTATCATCGGTTACtaat < 1:579881/162‑1 (MQ=255) cgcTTTTGCTGAGCATCAATAAACAACAACGCTGCTTTTAAgccactctcactcgaagaacgcaacgatttgctggattatggaaactggcggatgaatggtctgcgctgctc > 1:607522‑M2/1‑41 (MQ=255) cTTTTGCTGAGCATCAATAAACAACAACGCTGCTTTTAAGCCACTCAGAGAAATGGTCTGATCGCCATCGCGTAAGGTGATTg > 1:686964/1‑83 (MQ=255) tGCTGAGCATCAATAAACAACAACGCTGCTTTTAAGCCACTCAGAGAAATGGTCTGATCGCCATCGCGTAAGGTGATTGcccc < 2:686950/83‑3 (MQ=255) caacGCTGCTTTTAAGCCACTCAGAGAAATGGTCTGATCGCCAt > 2:677029/1‑44 (MQ=255) caacGCTGCTTTTAAGCCACTCAGAGAAATGGTCTGATCGCCATCGCGTAAGGTGATTGCCTTCCCTTCCTGAATCATCTGCAAAAACGCGGTGATGGTTGCCGTATCATCGGTTACTAATAACCATGGTGAAATCCGCCACTTGTCACCACTTAACGCCAACGGCTCGCCATCTa > 1:642411/1‑176 (MQ=255) gctgctTTTAAGCCACTCAGAGAAATGGTCTGATCGCCATcgcg < 1:677043/44‑1 (MQ=255) gctgctTTTAAGCCACTCAGAGAAATGGTCTGATCGCCATCGCGTAAGGTGATTGCCTTCCCTTCCTGAATCATCTGCAAAAACGCGGTGATGGTTGCCGTATCATCGGTTACTAATAACCATGGTGAAATCCGCCACTTGTCACCACTTAACGCCAACGGCTCGCCATCTAAcag < 2:642397/176‑1 (MQ=255) aaGCCACTCAGAGAAATGGTCTGATCGCCATCGCGTAAGGTGATTGCCTTCCCTTCCTGAATCATCTGCAAAAACGCGGTGATGGTTGCCGTATCATCGGTTACTAATAACCATGGTGAAATCCGCCACTTGTCACCAATTAACGCCAACGGCTGGCCATATAACAGCAGCCGTGGCGCTATCTCCCCTTCTGACGCCTCCGGACACTGCAATCCGCCGCGCCCACCACGTAAAACGGCATCGGTATGCGCCCCGGCGCGGCGGCCCCGGGgcag > 2:18763/1‑274 (MQ=255) | TTATCATCAGTCAGCGCAGTGACATTCACCTCACGACGCAATGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGTTTCCATAATCCAGCAAATCGTTGCGTTCTTCGAGTGAGAGTGGCGTCGGCGTTGGGTTAACCACCGCGACCTCTTTCAGCGCAGGCGCGGGCGGTACGCTGAGCGGCGGTTCGTCCCCTTTCTTGATCCACGCGGTTTCACTGCCAACGCGCTTTTGCTGAGCATCAATAAACAACAACGCTGCTTTTAAGCCACTCAGAGAAATGGTCTGATCGCCATCGCGTAAGGTGATTGCCTTCCCTTCCTGAATCATCTGCAAAAACGCGGTGATGGTTGCCGTATCATCGGTTACTAATAACCATGGTGAAATCCGCCACTTGTCACCACTTAACGCCAACGGCTCGCCATCTAACAGCAGCCGTGGCGCTATCTCCCCTTCTGACGCCTCCGGCGACTTCAATCCGCCGCGCTCAATACGTAAAACGGCATCGGTATGCGCCCCGGCGCTGCGGCTCAGGGTCAT > CP009273/2575436‑2575977 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |