New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	2800833 =	37 (0.920)	4 (0.110)	4/292	NT	10.0%	coding (343/993 nt)	proX	glycine betaine transporter subunit
	?	CP009273	2800969 =	37 (0.980)					coding (479/993 nt)	proX	glycine betaine transporter subunit

GCATTACTGTTAATCCAGTTCAGAGCACCATCACTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAACCCAGCGAAGTAGATTACAACGTTGGCTACACCTCGCTTGCTTCCGGCGATGCAACCTTCACCGCCGTGAACTGGACGCCACTGCATGACAACATGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTATGAACTGACCAACACCGTGACGCATAATCAGGGGAACTACGCAGCGATGATGGCCGACACCATCAGTCGCTACAAAGAGGGCAAACCGGTGT  >  CP009273/2800573‑2801103                                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                                               gCATTACGGTTAATCCAGTTCAGAGCACCATAACTGAAGGAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAACCCAGCGAAGTAGATTACAACGTTGGCTACACCTCGCTTGCTTCCGGCGATGCAACCTTCACCGCCGTGAACTGGACGCCACTGCATGACAACATGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATc                                                                                                                                                                                                                                                                  <  1:294905/275‑1 (MQ=255)                  gTTCAGAGCACCATCACTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAACCCAGCGAAGTAGATTACAACGTTGGCTACACCTCGCTTGCTTCCGGCGATGCAACCTTCACCGCCGTGAACTGGACGCCACTGCATGACAACATGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATAGTGACGGGGTATTTGTTAACGGCGCGGCACAGGGTTACTGGATCGATAACAAAAccgccg                                                                                                                                                                                                                                                  >  2:141839/1‑274 (MQ=255)                  gTTCAGAGCAACATCACTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAACCCAGCGAAGTAGATTACAACGTTGGCTACACCTCGCTTGCTTCCGGCGATGCAACATTCACCGCCGTGAACTGGACGCCACTGCATGACAACATTTACGAAGCTGCCGGTAGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACcgacga                                                                                                                                                                                                                                                 >  1:724888/1‑275 (MQ=255)                   ttCAGAGCACCATCACTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAACCCAGCGAAGTAGATTACAACGTTGGCTACACCTCGCTTGCTTCCGGCGATGCAACCTTCACCGCCGTGAACTGGACGCCACTGCATGACAACATGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGAc                                                                                                                                                                                                                                                <  1:259030/275‑1 (MQ=255)                    tCAGAGCACCAGCACTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAACCCAGCGAAGTAGATTACAACGTTGGCTACACCTCGCTTGCTTCCGGCGATGCAACCTTCACCGCCGTGAACTGGACGCCACTGCATGACAACATGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGAc                                                                                                                                                                                                                                                <  1:471765/274‑1 (MQ=255)                         gCACCAGTACTGAAGAAACCTTCCAGACGCTGCTTGTCAGTCGTGCGCTGTAGAAATTAGGTTATACCGTCAACAAACCCAGCGAATTATATTACAACGTTGGCTACACCTCGCTNGCTTCCGGCGATGCAACCTTCACCGCCGTGAACTGGACGCCACTGCATGACAACATGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTa                                                                                                                                                                                                                                           <  1:686104/274‑1 (MQ=255)                          cACCAGCCCTGTAGAAACCTTCCAGACGCTTCGTGTCGGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAACCCAGCGAAGTAGATTACAACGTTGGCTACACCTCGCTTGCTTCCGGCGATGCAACCTTCACCGCCGTGAACTGGACGCCACTGCATGACAACATGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACa                                                                                                                                                                                                                                         <  1:265668/275‑1 (MQ=255)                            ccATCACTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAACCCAGCGAAGTAGATTACAACGTTGGCTACACCTCGCTTGCTNCCGGCGATGCATCCTTCACCGCCGTGAACTGGACGCCACTGCATGACAACATGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACaaa                                                                                                                                                                                                                                       <  1:677220/275‑1 (MQ=255)                                  cTGAAGAAGCCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAACCCAGCGAAGTAGATTACAACGTTGGCTACACCTCGCTTGCTTCCGGCGATGCAACCTTCACCGCCGTGAACTGGACGCCACTGCATGACAACATGTACGAAGCTGCCGGTTGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCAc                                                                                                                                                                                                                                  <  1:141840/274‑1 (MQ=255)                                                                                        gtctttcctcacacagtccggcgtccaggtgtaataaaaccccgttttgccctcgttgtagcgactgagggtgtcggccatcatcgctgcgtagttcccctgatgatgcgtcccggtgttggtcagttcatacgcggcaagctggtggtggatcgcaccttcgcagccccagcCAGGGTGACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGc                                                                                                                                                                           >  2:197565‑M1/174‑275 (MQ=255)                                                                                         taCCGTCAACAAACCCAGCGAAGTAGATTACAACGTTGGCTACACCTCGCTTGCTTCCGGCGATGCAACCTTCACCGCCGTGAACTGGACGCCACTGCATGACAACATGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAgg                                                                                                                                                                                                                                                                             <  2:502195/176‑1 (MQ=255)                                                                                            ttaatgacccatgacggcgtccaggtgtaataaaacgccggtttgccctctttgtagcgactgatggtgtcggccatcatcgctgcgtagttcccctgattatgcgtcacggtgttggtcagttcatacgcggcaagctggtggttgatcgcaccttcgcagccccagcCAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGAc                                                                                                                                                                        >  1:166088‑M1/170‑274 (MQ=255)                                                                                              tCAACAAACCCAGCGAAGTAGATTACAACGTTGGCTACACCTCGCTTGCTTCCGGCGATGCAACCTTCACCGCCGTGAACTGGACGCCACTGCATGACAACATGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCt                                                                                                                                                                                                                                                                      >  1:680558/1‑178 (MQ=255)                                                                                                  caaACCCAGCGAAGTAGATTACAACGTTGGCTACACCTCGCTTGCTTCCGGCGATGCAACCTTCACCGCCGTGAACTGGACGCCACTGCATGACAACATGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATc                                                                                                                                                                                                                                                                  <  2:680544/178‑1 (MQ=255)                                                                                                            gAAGTAGATTACAACGTTGGCTACACCTCGCTTGCTTCCGGCGATGCAACCTTCACCGCCGTGAACTGGACGCCACTGCATGACAACATGTACGAAGCTGCCGGTGGCGATAAGAANTTTTATCGTGACGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAAc                                                                                                                                                       <  1:679943/275‑1 (MQ=255)                                                                                                                             tGGCAACACCTCGCTTGCTTCCGGCGATGCAACCTTCACCGCCGTGAACTGGACGCCACTGCATGACAACATGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGCTTACCTGATCGATAAGAAAACCGCGGACCAGTACAAAATCACCAACATCGCACAGCTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCctggct                                                                                                                                      >  1:728481/1‑275 (MQ=255)                                                                                                                                 tACACCTCGCGTTCTTTCGGCGAGGAAGCATTCAACGGCGTGAACTGGTCGCCATTGCATGTAAACATTTAAGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGTCACAGGGTTACCTGTACGAGTAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAAGTGAAAGAAACGAAGATAGTCAATTTGTTGGATACCAACGGCGACGGAAAAGCGGATTTAACCGTTTGTAACCCTGTCTgggg                                                                                                                                  <  2:728467/275‑1 (MQ=255)                                                                                                                                      cTCGCTTGCTTCCGGCGATGCAACCTGCACCGCCATGAACTGGACGCCACTGCATGACAACATGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCNCAACTGAANGATCCGAAGATCGc                                                                                                                                                                                                 >  1:483180/1‑207 (MQ=255)                                                                                                                                         gcttgcttCCGGCGATGCAACCTTCACCGCCGTGAACTGGACGCCACTGCATGACAACATGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCTATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACaa                                                                                                                                                                                                                     >  1:630678/1‑184 (MQ=255)                                                                                                                                             gcttCCGGCGATGCAACCTTCACCGCCGTGAACTGGACGCCACTGCATGACAACATGTACGAAGCTGGCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGa                                                                                                                                                                                                                 <  2:630664/184‑1 (MQ=255)                                                                                                                                                        tGCAACCTTCACCGCCGTGAACTGGACGCCACTGCATGACAACATGTACGAAGCTGCCGGCGGCGCTAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCTGCACAGGGTCACCTGATCGATAAGAAAACCGCAGACCAGTACAAAATAACAAACATCGCACAACCGCAAGTTCCGAAGATCTCCAAACTGTTCGAAACAAACGGCGACGGAAAAGCGGAGTAAACCGTTTGTAACCCTGGCGGGGGCTGCGAAGGTGNTGTCAagcacg                                                                                                           >  2:54499/1‑274 (MQ=255)                                                                                                                                                        ctgatggtgtcggccatcatcgctgcgtagttcccctgattatgcgtcacggtgttggtcagttcatacgcggcaagctggtggttgatcgcaccttcgcagccccagcCAGGGtt                                                                                                                                                                                                                                                                          <  1:268638‑M1/7‑1 (MQ=255)                                                                                                                                                                         tGAACTGGACGCCACTGCATGACAACATGTACGATGCGGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTATGaa                                                                                          <  1:64194/275‑1 (MQ=255)                                                                                                                                                                           aaCTGGACGCCACTGAATGACAACATGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACATGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCAGACGATCGCTAAACTGTTCGATACCCACGACGACGGAAACGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCCACCCCCAGCTTGCCGCGTATGAAc                                                                                         >  1:461631/1‑274 (MQ=255)                                                                                                                                                                                     cACTGAATGACTATATGTACTAAGCGTCCGTGGGCGAAATGAAATTTTATCGTGAAGGGGGATTTGTTAACGGCTCGGCACAGGGTTACCAGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTGAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTATGAACTGACCAACAcc                                                                              <  1:366060/275‑1 (MQ=255)                                                                                                                                                                                      ttcccctgattatgcgtcacggtgttggtcagttcatacgcggcaagctgggggttgatcgcaccttcgcagccccagcCAGGGtt                                                                                                                                                                                                                                                                          <  2:485301‑M1/7‑1 (MQ=255)                                                                                                                                                                                      aCTGCATGNCAACATGTNCGAAGCTGCCGGCGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACGAACGGCGACGGAAAAGCGGATTTAAc                                                                                                                                                       <  1:495699/201‑1 (MQ=255)                                                                                                                                                                                      aCTGCATGACAACATGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACaaaa                                                                                                                                                                                                                                      >  2:299604/1‑122 (MQ=255)                                                                                                                                                                                        tGCATGACAACATGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTAGTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTATGAACTGACCAACACCGt                                                                            <  1:178305/274‑1 (MQ=255)                                                                                                                                                                                          cATGACAACATGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCAc                                                                                                                                                                                                                                  <  1:299609/122‑1 (MQ=255)                                                                                                                                                                                           ctgattatgcgtcacggtgttggtcagttcatacgcggcaagctggtggttgatcgcaccttcgcagccccagcCAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCaaa                                                                                                                                                                                             <  2:134064‑M1/84‑1 (MQ=255)                                                                                                                                                                                               ttatgcgtcacggtgttggtcagttcatacgcggcaagctggtggttgatcgcaccttcgcagccccagcCAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGt                                                                                                                                                                                         >  1:134065‑M1/71‑158 (MQ=255)                                                                                                                                                                                               caacaTGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCTAAACTGTTCGATACAAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCctggct                                                                                                                                      >  1:585207/1‑209 (MQ=255)                                                                                                                                                                                               caacaTGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAAcc                                                                                                                                            >  1:650575/1‑203 (MQ=255)                                                                                                                                                                                                   aTGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCctgg                                                                                                                                        <  2:650561/203‑1 (MQ=255)                                                                                                                                                                                                    tGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTATGAACTGACCAACACCGTGACGCATAACCAg                                                               >  1:364627/1‑275 (MQ=255)                                                                                                                                                                                                        cGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACTGCGCGGcaca                                                                                                                                                                                                                                                                               <  1:717865/63‑1 (MQ=255)                                                                                                                                                                                                           aGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATc                                                                                                                                                                                                           >  1:694264/1‑128 (MQ=255)                                                                                                                                                                                                               gCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACAt                                                                                                                                                                                                                            >  1:534822/1‑107 (MQ=255)                                                                                                                                                                                                               gCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGaa                                                                                                                                                                                                       <  2:694250/128‑1 (MQ=255)                                                                                                                                                                                                                   gTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGca                                                                                                                                                                                                                        <  2:534812/107‑1 (MQ=255)                                                                                                                                                                                                                                                         aaCGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTATGAACTGACCAACACCGTGACGCATAATCAGGGGAACTACGAAGCGAAGAGGACCGAAACCATCAGGCGCTACCAAGAGGGc            >  2:304786/1‑273 (MQ=255)                                                                                                                                                                                                                                                         aaCGGCGCGGCAAAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGGGATCAACCACCAGCTTGCCGCGTATGAACTGACCAACACCGTGACGCATAATCAGGGGAACTACGCAGCGATGATGGCCGACACCATCAGTCGCTACAAAGAGGGCa           <  1:54500/274‑1 (MQ=255)                                                                                                                                                                                                                                                              cgcgGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCACACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTATGAACTGa                                                                                      >  2:323067/1‑194 (MQ=255)                                                                                                                                                                                                                                                               gcgGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGACCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTg                                                                                                                       >  1:166030/1‑160 (MQ=255)                                                                                                                                                                                                                                                                 ggCACAGGGTTACCTGATCGATAAGACAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTANGAACTGACNAACACCGTGACGCATAATCAGGGGAACTACGCAGCGATGATGGCCGACACCATCAGTCGCTACAAAGAGGGCAAACCGgtgt  >  1:491931/1‑275 (MQ=255)                                                                                                                                                                                                                                                                 ggCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACAGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTATGAACTGACCAACACCGTGAAGCATAATCAGGGGAACTACGCAGCGATGATGGCCGACACCAACAGACGCAACAACGAGGACAAACCGgtgt  >  1:18240/1‑275 (MQ=255)                                                                                                                                                                                                                                                                  gCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTATGAACTGACCaa                                                                                  <  1:323073/194‑1 (MQ=255)                                                                                                                                                                                                                                                                   cacaGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGACCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGAt                                                                                                                   <  2:166028/160‑1 (MQ=255)                                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                                               GCATTACTGTTAATCCAGTTCAGAGCACCATCACTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAACCCAGCGAAGTAGATTACAACGTTGGCTACACCTCGCTTGCTTCCGGCGATGCAACCTTCACCGCCGTGAACTGGACGCCACTGCATGACAACATGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTATGAACTGACCAACACCGTGACGCATAATCAGGGGAACTACGCAGCGATGATGGCCGACACCATCAGTCGCTACAAAGAGGGCAAACCGGTGT  >  CP009273/2800573‑2801103

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.