New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	2800833 =	37 (0.920)	4 (0.110)	4/292	NT	10.0%	coding (343/993 nt)	proX	glycine betaine transporter subunit
	?	CP009273	2800969 =	37 (0.980)					coding (479/993 nt)	proX	glycine betaine transporter subunit

TGGCTACACCTCGCTTGCTTCCGGCGATGCAACCTTCACCGCCGTGAACTGGACGCCACTGCATGACAACATGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTATGAACTGACCAACACCGTGACGCATAATCAGGGGAACTACGCAGCGATGATGGCCGACACCATCAGTCGCTACAAAGAGGGCAAACCGGTGTTTTATTACACCTGGACGCCGTACTGGGTGAGTAACGAA  >  CP009273/2800697‑2801141                                                                                                                                                                                                                                                                                 |                                                                                                                                                                             tGGCAACACCTCGCTTGCTTCCGGCGATGCAACCTTCACCGCCGTGAACTGGACGCCACTGCATGACAACATGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGCTTACCTGATCGATAAGAAAACCGCGGACCAGTACAAAATCACCAACATCGCACAGCTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCctggct                                                                                                                                                                            >  1:728481/1‑275 (MQ=255)     tACACCTCGCGTTCTTTCGGCGAGGAAGCATTCAACGGCGTGAACTGGTCGCCATTGCATGTAAACATTTAAGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGTCACAGGGTTACCTGTACGAGTAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAAGTGAAAGAAACGAAGATAGTCAATTTGTTGGATACCAACGGCGACGGAAAAGCGGATTTAACCGTTTGTAACCCTGTCTgggg                                                                                                                                                                        <  2:728467/275‑1 (MQ=255)                            tGCAACCTTCACCGCCGTGAACTGGACGCCACTGCATGACAACATGTACGAAGCTGCCGGCGGCGCTAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCTGCACAGGGTCACCTGATCGATAAGAAAACCGCAGACCAGTACAAAATAACAAACATCGCACAACCGCAAGTTCCGAAGATCTCCAAACTGTTCGAAACAAACGGCGACGGAAAAGCGGAGTAAACCGTTTGTAACCCTGGCGGGGGCTGCGAAGGTGNTGTCAagcacg                                                                                                                                                 >  2:54499/1‑274 (MQ=255)                                             tGAACTGGACGCCACTGCATGACAACATGTACGATGCGGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTATGaa                                                                                                                                <  1:64194/275‑1 (MQ=255)                                               aaCTGGACGCCACTGAATGACAACATGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACATGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCAGACGATCGCTAAACTGTTCGATACCCACGACGACGGAAACGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCCACCCCCAGCTTGCCGCGTATGAAc                                                                                                                               >  1:461631/1‑274 (MQ=255)                                                         cACTGAATGACTATATGTACTAAGCGTCCGTGGGCGAAATGAAATTTTATCGTGAAGGGGGATTTGTTAACGGCTCGGCACAGGGTTACCAGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTGAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTATGAACTGACCAACAcc                                                                                                                    <  1:366060/275‑1 (MQ=255)                                                            tGCATGACAACATGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTAGTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTATGAACTGACCAACACCGt                                                                                                                  <  1:178305/274‑1 (MQ=255)                                                                   caacaTGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCTAAACTGTTCGATACAAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCctggct                                                                                                                                                                            >  1:585207/1‑209 (MQ=255)                                                                       aTGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCctgg                                                                                                                                                                              <  2:650561/203‑1 (MQ=255)                                                                        tGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTATGAACTGACCAACACCGTGACGCATAACCAg                                                                                                     >  1:364627/1‑275 (MQ=255)                                                                                                                             aaCGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTATGAACTGACCAACACCGTGACGCATAATCAGGGGAACTACGAAGCGAAGAGGACCGAAACCATCAGGCGCTACCAAGAGGGc                                                  >  2:304786/1‑273 (MQ=255)                                                                                                                             aaCGGCGCGGCAAAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGGGATCAACCACCAGCTTGCCGCGTATGAACTGACCAACACCGTGACGCATAATCAGGGGAACTACGCAGCGATGATGGCCGACACCATCAGTCGCTACAAAGAGGGCa                                                 <  1:54500/274‑1 (MQ=255)                                                                                                                                  cgcgGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCACACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTATGAACTGa                                                                                                                            >  2:323067/1‑194 (MQ=255)                                                                                                                                   gcgGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGACCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTg                                                                                                                                                             >  1:166030/1‑160 (MQ=255)                                                                                                                                     ggCACAGGGTTACCTGATCGATAAGACAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTANGAACTGACNAACACCGTGACGCATAATCAGGGGAACTACGCAGCGATGATGGCCGACACCATCAGTCGCTACAAAGAGGGCAAACCGgtgt                                        >  1:491931/1‑275 (MQ=255)                                                                                                                                     ggCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACAGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTATGAACTGACCAACACCGTGAAGCATAATCAGGGGAACTACGCAGCGATGATGGCCGACACCAACAGACGCAACAACGAGGACAAACCGgtgt                                        >  1:18240/1‑275 (MQ=255)                                                                                                                                      gCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTATGAACTGACCaa                                                                                                                        <  1:323073/194‑1 (MQ=255)                                                                                                                                       cacaGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGACCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGAt                                                                                                                                                         <  2:166028/160‑1 (MQ=255)                                                                                                                                                      tCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTATGAACTGACCAACACCGTGACGCATaa                                                                                                         >  2:537275/1‑193 (MQ=255)                                                                                                                                                      tCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTATGAACTGACCAACACCGTGACGCATAATCAGGGGAACTACGCAGCGATGATGGCCGACACCATCAGTCGCGACAAAGAGGGCAAACCGGTGAGAGATTACACCTAGAca                       >  2:174288/1‑274 (MQ=255)                                                                                                                                                        gATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTATGAACTGACCAACACCGTGNCGCATAATCAGGGGAACTACGCAGCGATGATGGCCGACACCATCAGTCGCTACAAAGAGGGCAAACCGGTGTTTTATTACACCTGGACGcc                     >  1:531042/1‑275 (MQ=255)                                                                                                                                                          tAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTATGAACTGACCAACACCGTGACGCATAATCAg                                                                                                     <  1:537285/193‑1 (MQ=255)                                                                                                                                                           aaGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGAGCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTATGAACTGACCAACACCGTGACGCATAATCAGGGGAACTACGCAGCGATGATGGCCGACACCATCAGTCGCTACAAAGAGGGCAAACCGGTGTTTTATTACACCTGGACGCCg                    <  1:304791/273‑1 (MQ=255)                                                                                                                                                             gcaacccgccgACCAGTAACAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTATGAACTGACCAACACCGTGACGCATAATCAGGGGAACTACGCAGCGATGATGGCCGACACCATCAGTCGCTACAAAGAGGGCAAACCGGTGTTTTATTACACCTGGACGCCGTAc                 <  1:174290/269‑1 (MQ=255)                                                                                                                                                                        gtcgccgttggtatcgaacagtttggcgatcttcggatctttcagttgtgcgatgttggtgattttgtactggtcggcggttttcttatcgatcaggtaaccctgGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTATGAACTGACCAACACCGTGACGCATAATCAGGGGAACTACGCAGCGATGATGGCCGACACCATCAGTCGCTACAAAGAGGGCAAACCGGCGTTTTATTACACCTGGACGCCGTCATGGGTCATTaa      >  1:166088‑M2/106‑274 (MQ=255)                                                                                                                                                                           gccgttggtatcgaacagtttggcgatcttcggatctttcagttgtgcgatgttggtgattttgtactggtcggcggttttcttatcgatcaggtcaccctgGCTGGGGCTGCGAAGGTGCGATCCACCACCAGCTTGCCGCGTATGAACTGACCAACACCGGGACGCATCATCAGGGGAACTACGCAGCGATGATGGCCGACACCCTCAGTCGCTACAACGAGGGCAAAACGGGGTTTTATTACACCTGGACGCCGGACTGTGTGAGGAAAgac  >  2:197565‑M2/103‑274 (MQ=255)                                                                                                                                                                                       ccAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTATGAACTGACCAACACCGTGACGCATAATCa                                                                                                      >  2:106958/1‑163 (MQ=255)                                                                                                                                                                                       ccAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTATGAACTGACCAACACCGTGACGCATAATCAGGGGAACTACGCAGCGATGATGGCCGACACCATCAGt                                                                 >  1:29894/1‑200 (MQ=255)                                                                                                                                                                                         acagtttggcgatcttcggatctttcagttgtgcgatgttggtgattttgtactggtcggcggttttcttatcgatcaggtaaccctgGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTATGAACTGACCAACACCGTGACGCATaa                                                                                                         >  1:134065‑M2/89‑158 (MQ=255)                                                                                                                                                                                           cATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTATGAACTGACCAACACCGTGACGCATAATCAgggg                                                                                                  <  1:106959/163‑1 (MQ=255)                                                                                                                                                                                           cATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTATGAACTGACCAACACCGTGACGCATAATCAGGGGAACTACGCAGCGATGATGGCCGACACCATCAGTCGCt                                                             <  2:29893/200‑1 (MQ=255)                                                                                                                                                                                             tttggcgatcttcggatctttcagttgtgcgatgttggtgattttgtactggtcggcggttttcttatcgatcaggtaaccctgGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTATGAACTGACCAACACCGTGACGCATAATCAg                                                                                                     <  2:134064‑M2/74‑1 (MQ=255)                                                                                                                                                                                                             tCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTATGAACTGACCAACACCGTGACGCATAATCAGGGGAACTACGCAGCGATGATGGCCGa                                                                           >  2:37003/1‑168 (MQ=255)                                                                                                                                                                                                             tCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTATGAACTGACCAACACCGTGACGCATAATCAGGGGAACTACGCAGCGATGATGGCCGACACCATCAGTCGCTACAAAGAGGGCaa                                                >  2:281714/1‑195 (MQ=255)                                                                                                                                                                                                               cGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTATGAACTGACCAaca                                                                                                                      >  1:49357/1‑123 (MQ=255)                                                                                                                                                                                                                 aaGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTATGAACTGACCAACACCGTGACGCATAATCAGGGGAACTACGCAGCGATGATGGCCGACAcc                                                                       <  1:37004/168‑1 (MQ=255)                                                                                                                                                                                                                 aaGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTATGAACTGACCAACACCGTGACGCATAATCAGGGGAACTACGCAGCGATGATGGCCGACACCATCAGTCGCTACAAAGAGGGCAAACCg                                            <  1:281719/195‑1 (MQ=255)                                                                                                                                                                                                                   gATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTATGAACTGACCAACACCGt                                                                                                                  <  2:49356/123‑1 (MQ=255)                                                                                                                                                                                                                      cGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTATGAACTGACCAACACCGTGACGCATAATCAGGGGAACTACGCAGCGATGATGGCCGACACCATCAGTAGCTACAAAGAGGGCAAAcc                                             >  2:416781/1‑189 (MQ=255)                                                                                                                                                                                                                       gCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTATGAACTGACCAACACCGTGACGCATAATCAGGGGAACTACGCAGCGATGATGGCCGACACCATCAGTCGCTACAAAGAGGGCAAACCGGTGtt                                       >  1:389472/1‑194 (MQ=255)                                                                                                                                                                                                                          aaaCTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTATGAACTGACCAACACCGTGACGCATAATCAGGGGAACTACGCAGCGATGATGGCCGACAACATCAGTCGCTACAAAGAGGGCAAACCGgtg                                         <  1:416788/189‑1 (MQ=255)                                                                                                                                                                                                                           aaCTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTATGAACTGACCAACACCGTGACGCATAATCAGGGGAACTACGCAGCGATGATGGCCGACACCATCAGTCGCTACAAAGAGGGCAAACCGGTGTTttat                                   <  2:389465/194‑1 (MQ=255)                                                                                                                                                                                                                                          aCGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCAACCACCAGc                                                                                                                                              >  1:227987/1‑72 (MQ=255)                                                                                                                                                                                                                                              cGACGGAAAAGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGc                                                                                                                                          <  2:227985/72‑1 (MQ=255)                                                                                                                                                                                                                                                                      ttGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTATGAACTGACCAACACCGTGACGCATAATCAGGGGAACTACGCAGCGATGATGGCCGACACCa                                                                      >  2:268634/1‑116 (MQ=255)                                                                                                                                                                                                                                                                      ttGTAACCCTGGCTGGGGCTGCGAAGCTGCGATCGACCACCAGCTTGCCGCGTATGAACTGACCAACACCGTGACGCATAATCAgg                                                                                                    >  1:485310/1‑86 (MQ=255)                                                                                                                                                                                                                                                                          aaccctgGCTGGGGCTGCGAAGGTGCGATCAACCCCCAGCTTGCCGCGTATGAACTGACCAACACCGTGACGCATAATCAGGGGaa                                                                                                <  2:485301‑M2/79‑1 (MQ=255)                                                                                                                                                                                                                                                                          aaccctgGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTATGAACTGACCAACACCGTGACGCATAATCAGGGGAACTACGCAGCGATGATGGCCGACACCATCAg                                                                  <  1:268638‑M2/109‑1 (MQ=255)                                                                                                                                                                                                                                                                                 |                                                                                                                                                                             TGGCTACACCTCGCTTGCTTCCGGCGATGCAACCTTCACCGCCGTGAACTGGACGCCACTGCATGACAACATGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTATGAACTGACCAACACCGTGACGCATAATCAGGGGAACTACGCAGCGATGATGGCCGACACCATCAGTCGCTACAAAGAGGGCAAACCGGTGTTTTATTACACCTGGACGCCGTACTGGGTGAGTAACGAA  >  CP009273/2800697‑2801141

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.