New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 3210755	57 (1.420)	3 (0.080)	3/302	NT	5.1%	coding (618/624 nt)	yqjI	PadR family putative transcriptional regulator
	?	CP009273	= 3210920	NA (NA)					coding (1516/1521 nt)	aer	fused signal transducer for aerotaxis sensory component/methyl accepting chemotaxis component

TCCGCGAAGAGGAAGGAGGTAAGAAGCAGATTGCGCTGACCGAACAAGGCGCGCAGTGGCTGGAAGAAAACCGCGAACAGGTGGAGATGATTGAAGAACGCATCAAAGCGCGTTGCGTTGGCGCGGCGCTGCGCCAGAACCCGCAAATGAAGCGGGCGCTGGATAATTTTAAAGCGGTGCTGGATTTACGCGTCAACCAGAGCGATATCAGTGATGCACAAATAAAAAAGATCATTGCGGTGATCGACCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATGCAGTACCGTCACCGCGTCTTCCAGTCGGCTGGCGCGGTGTTTCACCATCGCCGACACCTGCGCACTCTCTTCCACCAGCTCGGCATTTTTCTGGGTGATCAGGTTAAG  >  CP009273/3210481‑3211028                                                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                                                  tCCGCGAAGAGGAAGGAGGTAAGAAGCAGATTGCGCTGACCGAACAAGGCGCGCAGTGGCTGGAAGAAAACCGCGAACAGGTGGAGATGATTGAAGAACGCATCAAAGCGCGTTGCGTTGGCGCGGCGCTGCGCCAGAACCCGCAAATGAAGCGGGCGCTGGATAATTTTAAAGCGGTGCTGGNTTTACGCGTCAACCAGAGCGATATCAGTGATGCACAAATAAAAAAGATCATTGCGGTGATCGACCGCGCCGCTTTTGATATTACGCAACTG                                                                                                                                                                                                                                                                                   >  1:580182‑M1/1‑275 (MQ=255)                    tAAGAAGCAGATTGCGCTGACCGAACAAGGCGCGCAGTGGCTGGAAGAAAACCGCGAACAGGTGGAGATGATTGAAGAACGCATCAAAGCGCGTTGCGTTGGCGCGGCGCTGCGCCAGAACCCGCAAATGAAGCGGGCGCTGGATAATTTTAAAGCGGTGCTGGATTTACGCGTCAACCAGAGCGATATCAGTGATGCACAAATAAAAAAGATCATTGCGGTGATCGACCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATccc                                                                                                                                                                                                                                                                 >  2:212644/1‑273 (MQ=255)                           cAGATTGCGCTGACCGAACAAGGCGCGCAGTGGCTGGAAGAAAACCGCGAACAGGTGGAGATGATTGAAGAACGCATCAAAGCGCGTTGCGTTGGCGCGGCGCTGCGCCAGAACCCGCAAATGAAGCGGGCGCTGGATAATTTTAAAGCGGTGCTGGATTTACGCGTCAACCAGAGCGATATCAGTGATGCACAAATAAAAAAGATCATTGCGGTGATCGACCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATACGCCAGTGgc                                                                                                                                                                                                                                                         >  1:691819/1‑275 (MQ=255)                             gATTGCGCTGACCGAGCAAGGCGCCCAGAGACTGGAAGAAAACCGCGAACAGGTGGAGATGATTGAAGAACGCATCAAAGCGCGTTGCGTTGGCGCGGCGCTGCGCCCGAACCCGCAAATGAAGCGGGCGCTGGATAATTTTAAAGCGGTGCTGGATTTACGCGTCAACAAGAGCGATATCAGNGCTGCCCCAATAAAAAACATCATTGCGGTGATCGAACGCGCCGCTTTTGATATTACGCAACTGGATTAATCACAGCATCCACCAATGgcgc                                                                                                                                                                                                                                                       >  1:500928/1‑275 (MQ=255)                                       aCCGAACAAGGCGCGCAGTGGCTGGAAGAAAACCGCGAACAGGTGGAGATGATTGAAGAACGCATCAAAGCGCGTTGCGTTGGCGCGGCGCTGCGCCAGAACCCGCAAATGAAGCGGGCGCTGGATAATTTTAAAGCGGTGCTGGAGTTACGTGTCAACCAGAGCGATATCAGTGATGCACAAATAAAAAAGATCATTGCGGTGATCGACCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTg                                                                                                                                                                                                                                             >  1:642468/1‑275 (MQ=255)                                                     gcAGTGGCTGGAAGAAAACCGCGAACAGGTGGAGATGATTGAAGAACGCATCAAAGCGCGTTGCGTTGGCGCGGCGCTGCGCCAGAACCCGCAAATGAAGCGGGCGCTGGATAATTTTAAAGCGGTGCTGGATTTACGCGTCAACCAGAGCGATATCAGTGATGCCCAAATAAAAAAGATCATTGCGGTGATCGACCGACCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGGGGCCCGGTGCCATTGccctttttccccc                                                                                                                                                                                                                                >  2:607196/1‑263 (MQ=255)                                                                   aaaaCCGCGAACAGGTGGAGATGATTGAAGAACGCATCAAAGCGCGTTGCGTTGGCGCGGCGCTGCGCCAGAACCCGCAAATGAAGCGGGCGCTGGATAATTTTAAAGCGGTGCTGGATTTACGCGTCAACCAGAGCGATATCAGTGATGCACAAATAAAAAAGATCATTGCGGTGATCGACCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATc                                                                                                                                                                                                                 <  1:212646/275‑1 (MQ=255)                                                                     aaCCGCGAACAGGTGGAGATGATTGAAGACCGCATCAAAGCGCGTTGCGTTGGCGCGGCGCTGCGCCAGAACCCGCAAATGAAGCGGGCGCTGGATAATTTTAAAGCGGTGCTGGATTTACGCGTCAACCAGAGCGATATCAGTGATGCACAAATAAAAAAGATCATTGCGGTGATCTACCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGt                                                                                                                                                                                                                                                            >  1:402450/1‑230 (MQ=255)                                                                             aCAGGTGGAGATGATTGAAGAACGCATCAAAGCGCGTTGCGTTGGCGCGGCGCTGCGCCAGAACCCGCAAATGAAGCGGGCGCTGGATAATTTTAAAGCGGTGCTGGATTTACGCGTCAACCAGAGCGATATCAGTGATGCACAAATAAAAAAGATCATTGCGGTGATCGACCGCGCCGCTTTTGATATTACGCAACTGcattaatcggtatgccggatccggcggttggagcacaatgcctgatgcgatgctggcgcatcttatcaggcctgcg                                                                                                                                                                                                       >  1:135521‑M1/1‑199 (MQ=255)                                                                                         gattggagggatcatcaacccgcgtTGCGTTGGCGCGGCGCTGCGCCAGAACCCGCAAATGAAGCGGGCGCTGGATAATTTTAAAGCGGTGCTGGATTTACGCGTCAACCAGAGCGATATCAGTGATGCACAAATAAAAAAGATCATTGCGGTGATCGACCGCGCCGCTTTTGATATTACGCAACTGcattaatcggtatgccggatccggcggttggagcacaatgcctgatgcgatgctggcgcatcttatcaggcctgcggggtgtgtag                                                                                                                                                                                             <  2:135520‑M1/261‑87 (MQ=255)                                                                                         gatTGAAGAACGCATCAAACCGCGTTGCGTTGGCGCGGCGCTGCGCAAGAACCCGCAAATGAAGCGGGCGCTGGATAATTTTAAAGCGGTGCTGGATTCACGCGTCAACGAGAGCTATATCAGTGATGCACAAATAAAAAAGCTCATTGAGGTGAACGACCGCGCCGCTATTGATCTTACGCTACCGCATTAATGGCCGCATCCGCACATGGCGCGGTGCAATAGCCGGAAGCGACGCTCGACGCGCCTGATGCGGCCTacactcttgggcgagc                                                                                                                                                                                           >  2:91280/1‑263 (MQ=255)                                                                                           ttGAAGAACGCATCAAAGCGCTTCGCGTTCGCGCGGCGCTGCGCCAGAACCCGCAAATGAAGCGGGCGCTGGATAATTGTAAAGCGGTGCTGGATTTACGCGTCAACCAGAGCGATATCAGTGATGCACAAATAAAAAAGATCATTGCGGTGATCGACCGCGCCGCTTTTGATATTACGCAACNGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTTACGCGCCTTATCCGGGCCACAACCGCCACACAcccc                                                                                                                                                                                         >  1:499602/1‑275 (MQ=255)                                                                                                   cGCATCAAAGCGCGTTGCGTTGGCGCGGCGCTGCGCCAGAACCCGCAAATGAAGCGGGCGCTGGATAATTTTAAAGCGGTGCTGGATTTACGCGTCAACCAGAGCGATATCAGTGATGCACAAATAAAAAAGATCATTGCGGTGATCGACCGCGCCGCTTTTGATATTACGCAACTGGATTAATcgc                                                                                                                                                                                                                                                                         >  2:256374/1‑187 (MQ=255)                                                                                                       tCAAAGCGCGTTGCGTTGGCGCGGCGCTGCGCCAGAACCCGCAAATGAAGCGGGCGCTGGATAATTTTAAAGCGGTGCTGGATTTACGCGTCAACCAGAGCGATATCAGTGATGCACAAATAAAAAAGATCATTGCGGTGATCGACCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCa                                                                                                                                                                                                                                                                     <  1:256377/187‑1 (MQ=255)                                                                                                                    ctttgGCGCGGCGCTGAGCCAGAACCCGCAAATGAAGCGGGCGCTGGATAATTTTAAAGCGGTGCTGTATTGACGCGTCAACCAGAGCGATATCAGTGATGCACAAATAAAAAAGATCATTGCGGTGATCGACCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAgca                                                                                                                                                                <  1:245197/273‑1 (MQ=255)                                                                                                                           gcggcgcTGCGCCAGAACCCGCAAATGAAGCGTGCGCTGGATAATTTTAAAGCGGTGCTGGATTTACGCGTCAACCAGAGCANTATCAGTGNTGCACAAATAAATAAGATCATTGCGGTGATCGACCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACTCCGCAGGCCTGATAAGATGCGCCAgcatcgcatc                                                                                                                                                         <  1:477758/275‑1 (MQ=255)                                                                                                                              gcgcTGCGCCAGAACCCGCAAATGAAGCGGGCGCTGGATAATTTTAAAGCGGTGCTGGATTTACGCGTCAACCAGAGCGATATCAGTGATGCACAAATAAAAAAGATCATTGCGGTGATCGACCGCGCCGCTTTTGATATTACGCAACTGcattaatcggtatgccggatccggcggttggagcacaatgcctgatgcgatgctggcgcatcttatcaggcctgcggggtgtgtagcgggtgtaggccggataaggcgcgtcaagcgtcgcatcc                                                                                                                                                      <  1:259238‑M1/275‑126 (MQ=255)                                                                                                                                 cTGCGCCAGAACCCGCAAATGAAGCGGGCGCTGGATAATTTTAAAGCGGTGCTGGATTTACGCGTCAACCAGAGCGATATCAGTGATGCACAAATAAAAAAGATCATTGCGGTGATCGACCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATNGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACAcc                                                                                                                                                                                           >  1:499022/1‑235 (MQ=255)                                                                                                                                                       agcgggtcttGGATAATTTTAAAGCGGTGCTGGATTTACGCGTCAACCATACCTATATCAGTGATGAACATATAAAAAATATCATTGCGGTGGTCGACCGCGCCGCTTTTGATATTACGCAACTGTATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCg                                                                                                                             <  2:691805/266‑1 (MQ=255)                                                                                                                                                          gggCGCTGGATAATTTTAAAGCGGTGCTGGATTTACGCGTCAACCAGAGCGATATCAGTGATGCACAAATAAAAAAGATCATTGCGGTGATCGACCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGc                                                                                                                                                                                                                                >  2:632868/1‑173 (MQ=255)                                                                                                                                                            gcgtttgttAATTTTAAAGCGGTGTTGGATTTACGCGTCAACCAGAGCGATATACGTGATGCACAAATAAAAAAGATCATTGCGGTGATCGACCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATGGCCGGATGCGGCGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATa                                                                                                                        <  1:91281/267‑1 (MQ=255)                                                                                                                                                              gcTGGATAATTTTAAAGCGGTGCTGGATTTACGCGTCAACCAGAGCGATATCAGTGATGCACAAATAAAAAAGATCATTGCGGTGATCGACCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGa                                                                                                                                                                                                                            <  1:632882/173‑1 (MQ=255)                                                                                                                                                                 ggATAATGTTAAGGCGGTGCTGGATTTCCTCTGCAACCAGAGCTCTTTCCTTGATGGACAAATAAACACGGTCAATGCGGTGATCGACGGCTCCGCGTTTGGTAGGACGCGATTGGTATAAGGGCCGGATCCGCCGGTGGCGCGGTGCCAGTGCCGGATGCGACGCTGGATGCGCCTGGTCCGGCCTACACCCGCGACTCAGCCCGCGGCCCTGATAAGAGGCGCCAGCATCGCATCAGGCATTGTGCGCCAATCGCCGGATCCTGCATACCGAt                                                                                                                   <  2:736452/275‑1 (MQ=255)                                                                                                                                                                        tttAAAGCGGTGCTGGATTTACGCGTCAACCAGAGCGATATCAGTGATGCACAAATAAAAAAGATCATTGCGGTGATCGACNGCGCCGCTNTTGATATTACGCTACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATGc                                                                                                             >  1:475134‑M2/1‑273 (MQ=255)                                                                                                                                                                         ttAAAGCGGTGCTGGATTTACGCGTCAACCAGAGCGATATCAGTGATGCACAAATAAAAAAGATCATTGCGGTGATCGACCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGc                                                                                                                                                                                       >  2:479962/1‑199 (MQ=255)                                                                                                                                                                             aGCGGTGCTGGATTTACGCGTCAACCAGAGCGATATCAGTGATGCACAAATAAAAAAGATCATTGCGGTGATCGACCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGc                                                                                                                                                                                   <  1:479971/199‑1 (MQ=255)                                                                                                                                                                                 gTGCTGGATTTACGCGTCAACCAGAGCGATATCAGTGATGCACAAATAAAAAAGATCATTGCGGTGATCGACCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCaa                                                                                                                                                                                                                                                >  2:445141/1‑134 (MQ=255)                                                                                                                                                                                 gTGCTGGATTTACGCGTCAACCAGAGCGATATCAGTGATGCACAAATAAAAAAGATCATTGCGGTGATCGACCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATAc                                                                                                                       >  1:269111/1‑255 (MQ=255)                                                                                                                                                                                  tGCTGGATTTACGCGTCAACCAGAGCGATATCAGTGATGCACAAATAAAAAAGATCATTGCGGTGATCGACCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGc                                                                                                                                                                                                             >  1:424215/1‑168 (MQ=255)                                                                                                                                                                                  tGCTGGATTTACGCGTCAACCAGAGCGATATCAGTGATGCACAAATAAAAAAGATCATTGCGGTGATCGACCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGc                                                                                                                                                                                                             >  2:163043/1‑168 (MQ=255)                                                                                                                                                                                     tGGATTTACGCGTCAACCAGAGCGATATCAGTGATGCACAAATAAAAAAGATCATTGCGGTGATCGACCGCGCCGCTTTTGATATTACGCAACTGGCTTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGAt                                                                                                                   <  2:269107/255‑1 (MQ=255)                                                                                                                                                                                     tGGATTTACGCGTCAACCAGAGCGATATCAGTGATGCACAAATAAAAAAGATCATTGCGGTGATCGACCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGc                                                                                                                                                                                                                                            <  1:445148/134‑1 (MQ=255)                                                                                                                                                                                      ggATTTACGCGTCAACCAGAGCGATATCAGTGATGCACAAATAAAAAAGATCATTGCGGTGATCGACCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTac                                                                                                                                                                                                         <  2:424208/168‑1 (MQ=255)                                                                                                                                                                                      ggATTTACGCGTCAACCAGAGCGATATCAGTGATGCACAAATAAAAAAGATCATTGCGGTGATCGACCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTac                                                                                                                                                                                                         <  1:163045/168‑1 (MQ=255)                                                                                                                                                                                            aCGCGTCAACCAGAGCGATATCAGTGATGCACAAATAAAAAAGATCATTGCGGTGATCGACCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTTCACTTGCCGGATGCGACGCTTGa                                                                                                                                                                                                                            >  2:622707/1‑143 (MQ=255)                                                                                                                                                                                                gTCAACCAGAGCGATATCAGTGATGCACAAATAAAAAAGATCATTGCGGTGATCGACCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGAcgcg                                                                                                                                                                                                                        <  1:622721/143‑1 (MQ=255)                                                                                                                                                                                                 tCAACCAGAGCGATATCAGTGATGCACAAATAAAAAAGATCATTGCGGTGATCGACCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTacacac                                                                                                                                                                                            >  2:654473/1‑170 (MQ=255)                                                                                                                                                                                                 tCAACCAGAGCGATATCAGTGATGCACAAATAAAAAAGATCATTGCGGTGATCGACCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGa                                                                                                                                 >  1:22828/1‑229 (MQ=255)                                                                                                                                                                                                     ccAGAGCGATATCAGTGATGCACAAATAAAAAAGATCATTGCGGTGATCGACCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCg                                                                                                                                                                                        <  1:654487/170‑1 (MQ=255)                                                                                                                                                                                                     ccAGAGCGATATCAGTGATGCACAAATAAAAAAGATCATTGCGGTGATCGACCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCg                                                                                                                             <  2:22827/229‑1 (MQ=255)                                                                                                                                                                                                        gaccGATATCAGTGATGAACAAATAAAAAAGTTCATTGCGGTGATCGACCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATGCAGTACCGTCACCGCGTCTTCCAGTCGGCTGgcg                                                                            <  1:15893/272‑1 (MQ=255)                                                                                                                                                                                                         agCGATATCAGTGATGCACAAATAAAAAAGATCATTGCGGTGATCGACCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCa                                                                                                                                                                                                                                                              >  2:110266/1‑96 (MQ=255)                                                                                                                                                                                                             atatCAGTGATGCACAAATAAAAAAGATCATTGCGGTGATCGACCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTgg                                                                                                                                                                                                                                                          <  1:110267/96‑1 (MQ=255)                                                                                                                                                                                                                      aTGCACAAATAAAAAAGATCATTGCGGTGATCGACCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTacacac                                                                                                                                                                                            >  1:187375/1‑149 (MQ=255)                                                                                                                                                                                                                       tGCACAAATAAAAAAGATCATTGCGGTGATCGACCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCT‑CAACCGCCGGATCCGGCATACCGATTAATACAGTACCGTCACCGCGTCTTCCAGTCGGCGTGCGCTGTGTTTCCCCacc                                                             >  2:620055/1‑272 (MQ=255)                                                                                                                                                                                                                        gCACAAATAAAAAAGATCATTGCGGTGATCGACCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCCACACCCGCTAAACCCCCCGCACGCCTGATAAGATGCGCCCGCATCGCCCCCGGCATTGTGCTCCAACCGACCGGTCCGGCATACCGACTCATGCACTACCGGCCCCGCGCCGCCCCGTCCGCTGCGCCGGTGGTTCAcgccc                                                             >  2:640521/1‑270 (MQ=255)                                                                                                                                                                                                                          acaAATAAAAAAGATCATTGCGGTGATCGACCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCg                                                                                                                                                                                        <  2:187373/149‑1 (MQ=255)                                                                                                                                                                                                                             aaTAAAAAAGATCATTTCGGTGATCGACCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCNGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCT‑CAACCGCCGGATCCGGCATACCGATTAATGCAGTACCGTCACCGCGTCTTCCAGTCGGCTGGCGCGGTGTTTCACCATCGCCGaca                                                      <  1:620068/275‑1 (MQ=255)                                                                                                                                                                                                                              agaaaaaaGATAATTGCGGTGATCGACCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGCCGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATGCAGTACCGTCACCGCGTCTTCCAGTCGGCTGGCGCGGTGTTTCACCATCGCCGaca                                                      <  1:24812/273‑1 (MQ=255)                                                                                                                                                                                                                                      gATCATTGCGGTGATCGACCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCCCATCAGTCATTGTGCTCCANCCGCCGGANCCGGCATACCGATTAATGCAGTACCGTCACCGTGTCTTCCAGTCGGCTGGCGCGTGCTTTCCCCATCCCCGCCACCTgcgc                                               >  1:476091/1‑274 (MQ=255)                                                                                                                                                                                                                                        tCATTGCGGTGATCGACCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTac                                                                                                                                                                                                         >  2:3555/1‑118 (MQ=255)                                                                                                                                                                                                                                            tGCGGTGATCGACCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACAccc                                                                                                                                                                                                     <  1:3555/118‑1 (MQ=255)                                                                                                                                                                                                                                              cGGTGATCGACCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAg                                                                                                                                                       >  1:23748/1‑162 (MQ=255)                                                                                                                                                                                                                                                        ccGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTac                                                                                                                                                                                                         >  2:124227/1‑102 (MQ=255)                                                                                                                                                                                                                                                           cgccgcTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCAGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATGCAGTACCGTCACCGCCTCTTCCAGTCGGCTg                                                                               >  1:158357/1‑221 (MQ=255)                                                                                                                                                                                                                                                            gccgcTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACAccc                                                                                                                                                                                                     <  1:124228/102‑1 (MQ=255)                                                                                                                                                                                                                                                             ccgcTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCgg                                                                                                                                                                                                                                                     <  1:128957/53‑1 (MQ=255)                                                                                                                                                                                                                                                                        atTACGCACCTGGATTAATCGCCCCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGCCGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATGCAGTACCGTCACCGCGTCTTCCAGTCGGCTGGCGCGGTGTTTCACCATCGCCGACACCTGCGCACTCTCTTCCACCAGCTCGGCATTTTTCTGGGTGa            <  1:607209/275‑1 (MQ=255)                                                                                                                                                                                                                                                                          tACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCg                                                                                                                                                                                        >  2:36136/1‑101 (MQ=255)                                                                                                                                                                                                                                                                          tACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAAccgc                                                                                                                                     >  1:258754/1‑152 (MQ=255)                                                                                                                                                                                                                                                                          aacgccataggATTAATCTCCCCATCCGCCAGTGCCGCGGTGCAATTGCTGTAGGCGACGCTTGACGCGCCTTATCCCGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATGCAGTACCGTCACCGCGTCTTCCAGTCGGCTGGCGCGGTGTTTCACCATCGCCGACACCTGCGCACTCTCTTCCACCAGCTCGGCATTTTTCTGGGTGAt           <  1:261814/265‑1 (MQ=255)                                                                                                                                                                                                                                                                              cAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCTCAgt                                                                                                                                                                                    <  1:36137/101‑2 (MQ=255)                                                                                                                                                                                                                                                                              cAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGa                                                                                                                                 <  2:258751/152‑1 (MQ=255)                                                                                                                                                                                                                                                                                 cTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTa                                                                                                                                                                                                 >  2:667014/1‑85 (MQ=255)                                                                                                                                                                                                                                                                                   gcattaatcggtatgccggatccggcggttggagcacaatgcctgatgcgatgctggcgcatcttatcaggcctgcggggtgtgtagcgggtgtaggccggataaggcgcgtcaagcgtcgcatccggcaattgcaccgcgccactggcggatgcggcgattaatccagtagcgtaatatcaanagcggcgcngtcgatcaccgcaatgatcttttttatttgtgcatcactgatatcgctctggttgacgcgtaaatccagcaccgctttaaa  >  1:475134‑M1/1‑1 (MQ=255)                                                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                                                  TCCGCGAAGAGGAAGGAGGTAAGAAGCAGATTGCGCTGACCGAACAAGGCGCGCAGTGGCTGGAAGAAAACCGCGAACAGGTGGAGATGATTGAAGAACGCATCAAAGCGCGTTGCGTTGGCGCGGCGCTGCGCCAGAACCCGCAAATGAAGCGGGCGCTGGATAATTTTAAAGCGGTGCTGGATTTACGCGTCAACCAGAGCGATATCAGTGATGCACAAATAAAAAAGATCATTGCGGTGATCGACCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATGCAGTACCGTCACCGCGTCTTCCAGTCGGCTGGCGCGGTGTTTCACCATCGCCGACACCTGCGCACTCTCTTCCACCAGCTCGGCATTTTTCTGGGTGATCAGGTTAAG  >  CP009273/3210481‑3211028

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.