New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 3275840	48 (1.200)	4 (0.100)	3/298	NT	8.0%	coding (506/1155 nt)	agaS	tagatose‑6‑phosphate ketose/aldose isomerase
	?	CP009273	= 3275924	46 (1.190)					coding (590/1155 nt)	agaS	tagatose‑6‑phosphate ketose/aldose isomerase

CTTCAGCGCCGTACCGACCACCGATCTGGTCACCAATCCGATGGACTACCTGAACCCAGCTCATCCGCTGCTGTTGATCTCCTTCGGTCGATCCGGCAACAGCCCGGAAAGCGTCGCAGCCGTGGAACTGGCAAATCAATTTGTACCGGAATGCTATCACCTGCCGATCACCTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATCAACAGCGATAACGCGTTTGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGCGAAGGTGTGTTTGGTTACGCACCGTGGAAACGGATCGTTTATCTCGGTAGCGGTGGCTTACAGGGCGCAGCACGCGAGTCGGCGCTGAAAGTGCTGGAACTGACGGCGGGTAAACTGGCGGCCTTTTATGATTC  >  CP009273/3275580‑3276113                                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                                                  cTTCAGCGCCGGACCGACCACCGATCTGGTCACCAATCCGATGGACTACCTGAACCCAGCTCATCCGCTGCTGTTGATCTCCTTCGGTCGANCCGGCAACAGCCCGGAAAGCGTCGCAGCCGTGGAACTGGCAAATCAATTTGTACCGGAATGCTATCACCTGCCGATCACCTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATCAACAGCGATAACGCGTTTGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACca                                                                                                                                                                                                                                                                     <  1:579483/275‑1 (MQ=255)   tCAGCGCCGTACCGACCACCGATCTGGTCACCAATCCGATGGACTACCTGAACCCAGCTCATCCGCTGCTGTTGATCTCCTTCGGTCGATCCGGCAACAGCCCGGAAAGCGTCGCANCCGTGGAACTGACAAATCAATTTGTACCGGAATGCTATCACCTGCCGATCACCTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATCAACAGCGATAACGCGTTTGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACcagc                                                                                                                                                                                                                                                                   <  1:676489/275‑1 (MQ=255)   tCAGCGCCGTACCGACCACCGATCTGGTCACCAATCCGATGGACTACCTGAACCCAGCTCATCCGCTGCTGTTGATCTCCTTCGGTCGATCCGGCAACAGCCCGGAAAGCGTCGCAGCCGTGGAACTGGCAAATCAATTTGTACCGGAATGCTATCACCTGCCGATCACCTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATCAACAGCGATAACGCGTTTGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACcagc                                                                                                                                                                                                                                                                   <  1:248682/275‑1 (MQ=255)          cGTACCGACCACCGATCTGGTCACCAATCCGATGGACTACCTGAACCCAGCTCATCCGCTGCTGTTGATCTCCTTCGGTCGATCCGGCAACAGCCCGGAAAGCGTCGCAGCCGTGGCACTGGCAAATCAATTTGTACCGGACTGCTATCACATGCCGCTCCCCTGCAACGCAGCGCCCGCTCTTTACCAAACCGCGCCGACCAGCGATAACGCCTTTGCCATTCTGCTGCCCGCAGAAACGCCCGACCGCGGCTTGGCCAGGACcagcatcgtg                                                                                                                                                                                                                                                             >  2:502467/1‑269 (MQ=255)                                       cGATGGACTACCTGAACCCAGGTCATCCGCTGCTGTTGATCTCCTTCGGTCGATCCGGAAACAGCCCGGAAAGCGTCGCAGCCGTGGAACTGGCAAATCAATTTGTACCGGAATGCTATNACCTGCCGCTCAACTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATCAACAGCGATAACGCGTTTGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCTcgcg                                                                                                                                                                                                                                  <  1:633941/272‑1 (MQ=255)                                       cGATGGACTACCTGAACCCAGCTCATCCGCTGCTGTTGATCTCCTTCGGTCGATCCGGCAACAGCCCGGAAAGCGTCGCAGCCGTGGAACTGGCAAATCAATTTGTACCGGAATGCTATCACCTGCCGATCACCTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATCAACAGCGATAACGCGTTTGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACccgc                                                                                                                                                                                                                                                                   >  1:462210/1‑239 (MQ=255)                                            tacgtccTGAACCCAGCTAATCCGCTGCTGTTGATCTCCTGCGGTCGATCCGGCAACAGCCCGGAAAGCGTCGCAGCCGTGGAACTGGCAAATCAATTTGTACCGGAATGCTATCACCTGCCGATCACCTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATCAACAGCGATAACGCGTGTGCCCTGCTGATGTCCGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCTCGCGGTTTTCg                                                                                                                                                                                                                           <  1:5589/269‑1 (MQ=255)                                               tACCTGAACCCAGCTAATCCGCTTCTGTTGATCTCCTTCGGTCGATCCGGCAACAGCCCGGAAAGCGTCGCAGCCGTGGAACTGGCAAATCAATTTGTACCGGAATGCTATCACCTGCCGATCACCTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATCAACAGCGATAACGCGTTTGCCNTGCTGATGCCCGCAGAAACGCACGATCGCGGaaggtttggctgttgatcgtctcaggtgcgaaaaccgcgaggcagctggccatcatggt                                                                                                                                                                                                                        >  1:501482‑M1/1‑215 (MQ=255)                                                 ccTGAACCCAGCTCATCCGCTGCTGTTGATCTCCTTCGGTCGATCCGGCAACAGCCCGGAAAGCGTCGCAGCCGTGGAACTGGCAAATCAATTTGTACCGGAATGCTATCACCTGCCGATCACCTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATCAACAGCGATAACGCGTTCGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCTCGCGGTTCTCGCACCt                                                                                                                                                                                                                      >  1:384050/1‑274 (MQ=255)                                                     atcccAGCTCATCCGCTGCTGTTGATCTCCTTCGGTCGATCCGGCAACAGCCCGGAAAGCGTCGCAGCCGTGGAACTGGCAAATCAATTTGTACCGGAATGCTATCACCTGCCGATCACCTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATCAACAGCGATAACGCGTTTGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCTCGCGGTTTTCGCACCTGAGAc                                                                                                                                                                                                                 <  1:302106/273‑1 (MQ=255)                                                           gCTCATCCGCTGCTGTTGATCTCCTTCGGTCGATCCGGCAACAGCCCGGAAAGCGTCGCAGCCGTGGAACTGGCAAATCAATTTGTACCGGAATGCTATCACCTGCCGATCACCTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATCAACAGCGATAACGCGTTTGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGAc                                                                                                                                                                                                                                                                       >  2:260777/1‑215 (MQ=255)                                                             tgaacaggtggtgtttatctccttAGGTCCATCCGGCAACAGCCCGGAAAGCGTCGCAGCCGTGGAACTGGCAAATCAATTTGTACCGGAATGCTATCACCTGCCGATCACCTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATCAACAGCGATAACGCGTTTGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGaaggtttggctgttgatcgtctcaggtgcgaaaaccgcgaggcagctggccatcatggtggtaatgctgctggt                                                                                                                                                                                                         <  2:501473‑M1/264‑75 (MQ=255)                                                             caaaatcgtggtgTTGGTCTCCGTGTGTCGATCCGGCAAACGCCCGGAAACCGTCGCATCAGGGGACCTGGCAAATCAAATGGGCCCGGATTGCGAGCAGCTGCCGATCACCTGCAACGGATCGGGCGCTCTTTACCCAAACGCGATCAACATCGATAACGCGTTTGCCCTGCTGATGCCCGCAGAAACGCACGCTCGCGGCGTTGCGATGACCAGCAGCCTTACCACCATGATGGCCAGCTGCCTCGCGTTTTTCGCACCTGAGACGAGCAACa                                                                                                                                                                                                         <  2:624535/264‑1 (MQ=255)                                                               aTCCGCTGCTGTTGATCTCCTTCGGTCGATCCGGCAACAGCCCGGAAAGCGTCGCAGCCGTGGAACTGGCAAATCAATTTGTACCGGAATGCTATCACCTGCCGATCACCTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATCAACAGCGATAACGCGTTTGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACcagc                                                                                                                                                                                                                                                                   <  1:260780/215‑1 (MQ=255)                                                                               ctcctcCGGTCGACACGGCAACAGCCCGGGGAGGGTCCCAGCCTTGGAACTGGCAAATCAATCTGTACCGGACGGCTATCACCTGCCGCTACCCTGCAACTAACCGGGCGCCCTTTACCTACACGCAATCACCAGACATAACGCGTCTGCCGTTCTGTCTCCACCAGAAACGCACGATCGCGGCTTTGCGCTGTCCCGCACACTCACAACTATCCCGGCCACCTGCCTCGCGGTTTTAGCACCTGAGGCGCTCAGCATCCAAACCTccccgcccc                                                                                                                                                                                       >  2:31907/1‑269 (MQ=255)                                                                                                 cAACGGCCCGGAAAGCGTCGAAGCCGTTGAACTGGCAAATCAATTTGTACCGGAATGCTATCACCTGCCGATCACCTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATCAACAGCGATATCGCGTGTGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAgg                                                                                                                                                                     <  1:656109/275‑1 (MQ=255)                                                                                                          ggAAAGCGTCGCAGCCGTGGAACTGGCAAATCAATTTGTACCGGAATGCTATCACCTGCCGATCACCTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATCAACAGCGATAACGCGTTTGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGaaggtttggctgttgatcgtctcaggtgcgaaaaccgcgaggcagctggccatcatggtggtaatgctgc                                                                                                                                                                                                             >  2:484829‑M1/1‑156 (MQ=255)                                                                                                              aGCGTCGCAGCCGTGGAACTGGCAAATCAATTTGTACCGGAATGCTATCACCTGCCGATCACCTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATCAACAGCGATAACGCGTTTGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGaaggtttggctgttgatcgtctcaggtgcgaaaaccgcgaggcagctggccatcatggtggtaatgctgctggt                                                                                                                                                                                                         <  1:484838‑M1/226‑75 (MQ=255)                                                                                                                 gTCGCAGCCGTGGAACTGGCAAATCAATTTGTACCGGAATGCTATCACCTGCCGATCACCTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATCAACAGCGATAACGCGTTTGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCCGGCGATCCTGAACCCAc                                                                                                                                                      >  1:339789/1‑274 (MQ=255)                                                                                                                   cGCAGCCGTGGAACTGGCAAATCAATTTGTACCGGAATGCTATCACCTGCCGATCACCTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATCAACAGCGATAACGCGTTTGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCNAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCACAACGTGGCGGAACGTTGCCAGGCGATCCTGACCTCACTgg                                                                                                                                                   >  1:576884/1‑275 (MQ=255)                                                                                                                    gCAGCCGTGGAACTGGCAAATCAATTTGTACCGGAATGCTATCACCTGCCGATCACCTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATCAACAGCGATAACGCGTTTGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTGCCACCATGATGGCCAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTggg                                                                                                                                                  <  1:31908/275‑1 (MQ=255)                                                                                                                             gAACTGGCAAATCAATTTGTACCGGAATGCTATCACCTGCCGATCACCTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATCAACAGCGATAACGCGTTTGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCt                                                                                                                                                                                                                                      >  1:331026/1‑182 (MQ=255)                                                                                                                               aCTGGCAAATCAATTTGTACCGGAATGCTATCACCTGCCGATCACCTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATCAACAGCGATAACGCGTTTGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGc                                                                                                                                        <  1:119736/274‑1 (MQ=255)                                                                                                                                 tGGCAAATCAATTTGTACCGGAATGCTATCACCTGCCGATCACCTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATCAACAGCGATAACGCGTTTGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCTcgcg                                                                                                                                                                                                                                  <  2:331020/182‑1 (MQ=255)                                                                                                                                  ggCAAATCAATTTGTACCGGAATGCTATCACCTGCCGATCACCTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATCAACAGCGATAACGCGTTTGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATgg                                                                                                                                                                                                                                                >  2:412380/1‑167 (MQ=255)                                                                                                                                      aaTCAATTTGTACCGGAATGCTATCACCTGCCGATCACCTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATCAACAGCGATAACGCGTTTGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAg                                                                                                                                                                                                                                            <  1:412387/167‑1 (MQ=255)                                                                                                                                                  ccGGAATGCTATCCCCGGCCGTTCCCCTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATCAACAGCGATAACGCGTTTGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGCGAAGGTGTGTTTGGTTACg                                                                                                                     <  1:174920/274‑1 (MQ=255)                                                                                                                                                     ataagagacagccTGCCGATCACCTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATCAACAGCGATAACGCGTTTGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGCGACGGTGTGTTTGGTTACGCAc                                                                                                                  <  1:599217/263‑1 (MQ=255)                                                                                                                                                              catccgCCGATCACCTGCAACGAAGCTGGCGCTCTTTACCAAAACGCGATCAACAGCGATAACGCGTTTGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGAc                                                                                                                                                           <  2:123247/219‑1 (MQ=255)                                                                                                                                                               aCCTGCCGATCACCTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATCAACAGCGATAACGCGTTTGCCCTGCCGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGAc                                                                                                                                                                                                                                                                       >  1:432136/1‑115 (MQ=255)                                                                                                                                                                ccTGCCGATCTCCTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATAAACAGCGATAACGCGTTTGCCCGGCTGATGTCCGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCAATACCACCATGCTGGCCAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACAGGGCGATTTCAGCGAAGGTGTGTTTGGTTACGCACCGTGGAAACGGa                                                                                                      <  1:694104/275‑1 (MQ=255)                                                                                                                                                                ccTCCCGAGCCCCGGCACCGAAGCGGGCGCTCTTTACCAAACCGCGATCAACCGCGATAACGCGTTTGCCCTGCTGATGCCCGCAGAACCGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCTCGCGGTGTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGCGAAGGTGTGTTTGGTTACGCACCGTGGAAACGGa                                                                                                      <  2:339783/275‑1 (MQ=255)                                                                                                                                                                   gCCGATCACCTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATCAACAGCGATAACGCGTTTGCCCTGCCGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACcagc                                                                                                                                                                                                                                                                   <  2:432129/115‑1 (MQ=255)                                                                                                                                                                    ccGATCACCTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATCAACAGCGATAACGCGTTTGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGAc                                                                                                                                                                                                                                                                       >  2:174083/1‑110 (MQ=255)                                                                                                                                                                    ccGATCACCTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATCAACAGCGATAACGCGTTTGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCTCGCGGtt                                                                                                                                                                                                                               >  1:388519/1‑150 (MQ=255)                                                                                                                                                                    ccGATCACCTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATCAACAGCGATAACGCGTTTGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGCGAAGGTGTGTTTGGTTACGCAACGTGGAAACGGAACGt                                                                                                  >  1:258579/1‑275 (MQ=255)                                                                                                                                                                        tCACCTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATCAACAGCGATAACGCGTTTGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACcagc                                                                                                                                                                                                                                                                   <  1:174085/110‑1 (MQ=255)                                                                                                                                                                        tCACCTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATCAACAGCGATAACGCGTTTGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCTCGCGGTTTTCg                                                                                                                                                                                                                           <  2:388512/150‑1 (MQ=255)                                                                                                                                                                           ccTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATCAACAGCGATAACGCGTTTGCCCTGCCGATGCCGGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGGTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGCGAAGGGGGCGTTGGTTACCCACTGGGGAAAccactttctctttt                                                                                            >  2:599204/1‑261 (MQ=255)                                                                                                                                                                             tGCAACAAAGCGGGCCCCCTATCCCAGAACGCGATCAACAGCGCCATCGCGTTTGTCCTGCTGATTACCACAGAACCTCACGATCGCGGCGTTGCGATGCCCAGCAGCATGACCACCCTGATGGCCAGCTGCCTCGCGGGTTGCGCACCTGAGTCGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGCGAAGGTGTGTTTGGTTACGCACCGTGGAAACGGATCGTTTATCTCgg                                                                                         <  2:258576/275‑1 (MQ=255)                                                                                                                                                                                  cGAAGCGGGCGCTCTTTACCAAAACGCGATCAACAGCGATAACGCGTTTGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCTCGCGGtt                                                                                                                                                                                                                               >  1:107713/1‑136 (MQ=255)                                                                                                                                                                                   gAAGCGGGCGCTCTTTACCAAAACGCTATCAACAGCGATATCGCGTTTGCCCTGCTGATGCCCGAAGAAACGCACGATCGCGGCGTTGCGATGACACGCAGCATTACCACCATGATGGCCAGCTGCCGCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGCGAAGGTGTGTTTGGTTACGCACCGTGGAAACGGATCGTTTATCTCGGTAGCg                                                                                    <  1:385089/274‑1 (MQ=255)                                                                                                                                                                                      gCGGGCGCTCTTTACCAAAACGCGATCAACAGCGATAACGCGTTTGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCTCGCGGTTTTCg                                                                                                                                                                                                                           <  2:107712/136‑1 (MQ=255)                                                                                                                                                                                                      aaaaCGCGATCAACAGCGATAACGCGTTTGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCTCGCGGTTTTCGCACCTGAGACgatcaacagcagcggatgagctgggttcaggtagtccatcggattggtgaccagatcggtggtcggtacggcgctgaagtttttcccggtatggctggcgagccacggcgcgatgatgtcaccgataaatgccgacgttccggc                                                                 <  1:101328‑M2/274‑145 (MQ=255)                                                                                                                                                                                                        aaCGCGATCAACAGCTATAACACCCTTGCTCTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCNCACTGGGCGATTTCAGCGAAGGTGTGTTTGGTTACGCACCGTGGAAACGGATCGTTTATCTCGGTAGCGGTGGCTTACAGGGCGCAGCAcg                                                              >  1:513590/1‑275 (MQ=255)                                                                                                                                                                                                        aaCGCGATCAACAGCGATAACGCGTTTGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCt                                                                                                                                                                                                                                      >  1:129939/1‑107 (MQ=255)                                                                                                                                                                                                            cgATCAACAGCGATAACGCGTTTGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCTcgcg                                                                                                                                                                                                                                  <  2:129938/107‑1 (MQ=255)                                                                                                                                                                                                                                  tGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGCGAAGGTGTGTTTGGt                                                                                                                         >  1:309557/1‑190 (MQ=255)                                                                                                                                                                                                                                    cccTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGCGAAGGTGTGtt                                                                                                                             <  1:389263/184‑1 (MQ=255)                                                                                                                                                                                                                                      ctgctgATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGCGAAGGTGTGTTTGGTTACg                                                                                                                     <  2:309552/190‑1 (MQ=255)                                                                                                                                                                                                                                                 cGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCTCGCGGTGTTCGCACCTGAGACGATCAACAGCCCAACCTTCCCCCACGTGGCGGACCGTTGCCAGGCGATCCTGACCTCCCTGGGCGCTTTCTGCGCAGGTGTGTTTGGTTACGCACCGTGGCAACGGATCGTTTATCTCGGTAGGGGTGGCGTACAGGGAGCCGAACGGGAGATGGCGCGGAGAGGGGGGGAACTGAGGGGGGGGAAAc                     >  2:205839/1‑275 (MQ=255)                                                                                                                                                                                                                                                   cAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCTCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGCGAAGGTGTGTTTTGTTACGCACCGTNGAAACGGANCGTTTATCTCGGTAGCGGTGGCTTACAGGGCGCAGCACGCGAGTCGGCGCTGAAAGTGCTGGAACTGACGGCGGGTAAACTg                   >  1:475066/1‑275 (MQ=255)                                                                                                                                                                                                                                                       aaCGCACGATCGCGGCTTTGCGATGACCAGCAGAATTACCACCATGATGGCCAGCTGCCTCGCGGTTTTCGCACCTGGGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGCGAAGGTGTGTTTGGTTACGCACCGTGGAAACGGATCGTTTATCTCGGTAGCGGTGGCTTACAGGGCGCAGCACGCGAGTCGGCGCTGAAAGTGCTGGAACTGACGGCGGGTAAACTggcg                <  1:22631/274‑1 (MQ=255)                                                                                                                                                                                                                                                                     gCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGATGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGCGAAGGTGTGTTTGGTTACGCACCGTGGAAACGGATCGTTTATCTCGGTAGCGGTGGCTTACAGGGCGCAGCACGCGAGTCGGCGCTGAAAGTGCTGGAACTGACGGCGGGTAAACTGGCGGCCTTTTATGATtc  <  1:458055/274‑1 (MQ=255)                                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                                                  CTTCAGCGCCGTACCGACCACCGATCTGGTCACCAATCCGATGGACTACCTGAACCCAGCTCATCCGCTGCTGTTGATCTCCTTCGGTCGATCCGGCAACAGCCCGGAAAGCGTCGCAGCCGTGGAACTGGCAAATCAATTTGTACCGGAATGCTATCACCTGCCGATCACCTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATCAACAGCGATAACGCGTTTGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGCGAAGGTGTGTTTGGTTACGCACCGTGGAAACGGATCGTTTATCTCGGTAGCGGTGGCTTACAGGGCGCAGCACGCGAGTCGGCGCTGAAAGTGCTGGAACTGACGGCGGGTAAACTGGCGGCCTTTTATGATTC  >  CP009273/3275580‑3276113

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.