New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 3275840	48 (1.200)	4 (0.100)	3/298	NT	8.0%	coding (506/1155 nt)	agaS	tagatose‑6‑phosphate ketose/aldose isomerase
	?	CP009273	= 3275924	46 (1.190)					coding (590/1155 nt)	agaS	tagatose‑6‑phosphate ketose/aldose isomerase

CTCCTTCGGTCGATCCGGCAACAGCCCGGAAAGCGTCGCAGCCGTGGAACTGGCAAATCAATTTGTACCGGAATGCTATCACCTGCCGATCACCTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATCAACAGCGATAACGCGTTTGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGCGAAGGTGTGTTTGGTTACGCACCGTGGAAACGGATCGTTTATCTCGGTAGCGGTGGCTTACAGGGCGCAGCACGCGAGTCGGCGCTGAAAGTGCTGGAACTGACGGCGGGTAAACTGGCGGCCTTTTATGATTCTCCAACCGGATTCCGTCATGGACCAAAATCGCTGGTCGATGACGAAACGCTGGTGGTGGTATTTGTCTCCAGCCACCCTTAC  >  CP009273/3275658‑3276195                                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                                                ctcctcCGGTCGACACGGCAACAGCCCGGGGAGGGTCCCAGCCTTGGAACTGGCAAATCAATCTGTACCGGACGGCTATCACCTGCCGCTACCCTGCAACTAACCGGGCGCCCTTTACCTACACGCAATCACCAGACATAACGCGTCTGCCGTTCTGTCTCCACCAGAAACGCACGATCGCGGCTTTGCGCTGTCCCGCACACTCACAACTATCCCGGCCACCTGCCTCGCGGTTTTAGCACCTGAGGCGCTCAGCATCCAAACCTccccgcccc                                                                                                                                                                                                                                                                         >  2:31907/1‑269 (MQ=255)                   cAACGGCCCGGAAAGCGTCGAAGCCGTTGAACTGGCAAATCAATTTGTACCGGAATGCTATCACCTGCCGATCACCTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATCAACAGCGATATCGCGTGTGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAgg                                                                                                                                                                                                                                                       <  1:656109/275‑1 (MQ=255)                                   gTCGCAGCCGTGGAACTGGCAAATCAATTTGTACCGGAATGCTATCACCTGCCGATCACCTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATCAACAGCGATAACGCGTTTGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCCGGCGATCCTGAACCCAc                                                                                                                                                                                                                                        >  1:339789/1‑274 (MQ=255)                                     cGCAGCCGTGGAACTGGCAAATCAATTTGTACCGGAATGCTATCACCTGCCGATCACCTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATCAACAGCGATAACGCGTTTGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCNAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCACAACGTGGCGGAACGTTGCCAGGCGATCCTGACCTCACTgg                                                                                                                                                                                                                                     >  1:576884/1‑275 (MQ=255)                                      gCAGCCGTGGAACTGGCAAATCAATTTGTACCGGAATGCTATCACCTGCCGATCACCTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATCAACAGCGATAACGCGTTTGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTGCCACCATGATGGCCAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTggg                                                                                                                                                                                                                                    <  1:31908/275‑1 (MQ=255)                                                 aCTGGCAAATCAATTTGTACCGGAATGCTATCACCTGCCGATCACCTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATCAACAGCGATAACGCGTTTGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGc                                                                                                                                                                                                                          <  1:119736/274‑1 (MQ=255)                                                                    ccGGAATGCTATCCCCGGCCGTTCCCCTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATCAACAGCGATAACGCGTTTGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGCGAAGGTGTGTTTGGTTACg                                                                                                                                                                                                       <  1:174920/274‑1 (MQ=255)                                                                       ataagagacagccTGCCGATCACCTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATCAACAGCGATAACGCGTTTGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGCGACGGTGTGTTTGGTTACGCAc                                                                                                                                                                                                    <  1:599217/263‑1 (MQ=255)                                                                                catccgCCGATCACCTGCAACGAAGCTGGCGCTCTTTACCAAAACGCGATCAACAGCGATAACGCGTTTGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGAc                                                                                                                                                                                                                                             <  2:123247/219‑1 (MQ=255)                                                                                  ccTGCCGATCTCCTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATAAACAGCGATAACGCGTTTGCCCGGCTGATGTCCGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCAATACCACCATGCTGGCCAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACAGGGCGATTTCAGCGAAGGTGTGTTTGGTTACGCACCGTGGAAACGGa                                                                                                                                                                                        <  1:694104/275‑1 (MQ=255)                                                                                  ccTCCCGAGCCCCGGCACCGAAGCGGGCGCTCTTTACCAAACCGCGATCAACCGCGATAACGCGTTTGCCCTGCTGATGCCCGCAGAACCGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCTCGCGGTGTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGCGAAGGTGTGTTTGGTTACGCACCGTGGAAACGGa                                                                                                                                                                                        <  2:339783/275‑1 (MQ=255)                                                                                      ccGATCACCTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATCAACAGCGATAACGCGTTTGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGCGAAGGTGTGTTTGGTTACGCAACGTGGAAACGGAACGt                                                                                                                                                                                    >  1:258579/1‑275 (MQ=255)                                                                                             ccTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATCAACAGCGATAACGCGTTTGCCCTGCCGATGCCGGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGGTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGCGAAGGGGGCGTTGGTTACCCACTGGGGAAAccactttctctttt                                                                                                                                                                              >  2:599204/1‑261 (MQ=255)                                                                                               tGCAACAAAGCGGGCCCCCTATCCCAGAACGCGATCAACAGCGCCATCGCGTTTGTCCTGCTGATTACCACAGAACCTCACGATCGCGGCGTTGCGATGCCCAGCAGCATGACCACCCTGATGGCCAGCTGCCTCGCGGGTTGCGCACCTGAGTCGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGCGAAGGTGTGTTTGGTTACGCACCGTGGAAACGGATCGTTTATCTCgg                                                                                                                                                                           <  2:258576/275‑1 (MQ=255)                                                                                                     gAAGCGGGCGCTCTTTACCAAAACGCTATCAACAGCGATATCGCGTTTGCCCTGCTGATGCCCGAAGAAACGCACGATCGCGGCGTTGCGATGACACGCAGCATTACCACCATGATGGCCAGCTGCCGCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGCGAAGGTGTGTTTGGTTACGCACCGTGGAAACGGATCGTTTATCTCGGTAGCg                                                                                                                                                                      <  1:385089/274‑1 (MQ=255)                                                                                                                          aaCGCGATCAACAGCTATAACACCCTTGCTCTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCNCACTGGGCGATTTCAGCGAAGGTGTGTTTGGTTACGCACCGTGGAAACGGATCGTTTATCTCGGTAGCGGTGGCTTACAGGGCGCAGCAcg                                                                                                                                                >  1:513590/1‑275 (MQ=255)                                                                                                                                                    tGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGCGAAGGTGTGTTTGGt                                                                                                                                                                                                           >  1:309557/1‑190 (MQ=255)                                                                                                                                                      cccTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGCGAAGGTGTGtt                                                                                                                                                                                                               <  1:389263/184‑1 (MQ=255)                                                                                                                                                        ctgctgATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGCGAAGGTGTGTTTGGTTACg                                                                                                                                                                                                       <  2:309552/190‑1 (MQ=255)                                                                                                                                                                   cGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCTCGCGGTGTTCGCACCTGAGACGATCAACAGCCCAACCTTCCCCCACGTGGCGGACCGTTGCCAGGCGATCCTGACCTCCCTGGGCGCTTTCTGCGCAGGTGTGTTTGGTTACGCACCGTGGCAACGGATCGTTTATCTCGGTAGGGGTGGCGTACAGGGAGCCGAACGGGAGATGGCGCGGAGAGGGGGGGAACTGAGGGGGGGGAAAc                                                                                                       >  2:205839/1‑275 (MQ=255)                                                                                                                                                                     cAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCTCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGCGAAGGTGTGTTTTGTTACGCACCGTNGAAACGGANCGTTTATCTCGGTAGCGGTGGCTTACAGGGCGCAGCACGCGAGTCGGCGCTGAAAGTGCTGGAACTGACGGCGGGTAAACTg                                                                                                     >  1:475066/1‑275 (MQ=255)                                                                                                                                                                         aaCGCACGATCGCGGCTTTGCGATGACCAGCAGAATTACCACCATGATGGCCAGCTGCCTCGCGGTTTTCGCACCTGGGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGCGAAGGTGTGTTTGGTTACGCACCGTGGAAACGGATCGTTTATCTCGGTAGCGGTGGCTTACAGGGCGCAGCACGCGAGTCGGCGCTGAAAGTGCTGGAACTGACGGCGGGTAAACTggcg                                                                                                  <  1:22631/274‑1 (MQ=255)                                                                                                                                                                                       gCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGATGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGCGAAGGTGTGTTTGGTTACGCACCGTGGAAACGGATCGTTTATCTCGGTAGCGGTGGCTTACAGGGCGCAGCACGCGAGTCGGCGCTGAAAGTGCTGGAACTGACGGCGGGTAAACTGGCGGCCTTTTATGATtc                                                                                    <  1:458055/274‑1 (MQ=255)                                                                                                                                                                                                  aCCAGCAGCATTACCACCATGATGGCCAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTccgcgatcgtgcgtttctgcgggcatcagcagggcaaacgcgttatcgctgttgatcgcgttttggtaaagagcgcccgcttcgttgcaggtgatcggcaggtgatagcattccggtacaaattgatttgccagttccacggctgcgacgctttccgggctgttgccggatggacctaaggagataaacaccacctgttca                                                                        <  2:501473‑M2/275‑202 (MQ=255)                                                                                                                                                                                                  aCCAGCAGCATTACCACCATGATGGCCAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTccgcgatcgtgcgtttctgcgggcatcagcagggcaaacgcgttatcgctgttgatcgcgttttggtaaagagcgcccgcttcgttgcaggtgatcggcaggtgatagcattccggtacaaattgatttgccagttccacggctgcgacgct                                                                                                                         <  1:484838‑M2/226‑153 (MQ=255)                                                                                                                                                                                                      gcagcaTTACCACCATGATGGCCAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTccgcgatcgtgcgtttctgcgggcatcagcagggcaaacgcgttatcgctgttgatcgcgttttggtaaagagcgcccgcttcgttgcaggtgatcggcaggtgatagcattccggtacaaattgatttgccagttccacggctgcgacgctttcc                                                                                                                     >  2:484829‑M2/1‑70 (MQ=255)                                                                                                                                                                                                      gcagcaTTACCACCATGATGGCCAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGCGAAGGTGTGTTTGGTTACGCACCGTGGAAACGGATCGTTTATCTCGGTAGCGGTGGCTTACAGGGCGCAGCACGCGAGTCGGCGCTGaagttttt                                                                                                                           <  1:421898/220‑7 (MQ=255)                                                                                                                                                                                                          caTTACCACCATGATGGCCAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGCGAAGGTGTGTTTGGt                                                                                                                                                                                                           >  1:690293/1‑136 (MQ=255)                                                                                                                                                                                                              accaccATGATGGCCAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGCGAAGGTGTGTTTGGTTACg                                                                                                                                                                                                       <  2:690279/136‑1 (MQ=255)                                                                                                                                                                                                                 accaTGATGGCCAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTccgcgatcgtgcgtttctgcgggcatcagcanggcaaacgcgttatcgctgttgatcgcgttttggtaaagagcgcccgcttcgttgcaggtgatcggcaggtgatagcattccggtacaaattgatttgccagttccacggctgcgacgctttccgggctgttgccggatcgaccgaaggagatcaacagaagcggattagctgggttcaggta                                                          >  1:501482‑M2/1‑59 (MQ=255)                                                                                                                                                                                                                    atgatgGCCAGCTGCCTCGCGGTTTTCGCACCTGGGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGCGAAGGTGTGTTTGGTTACGCACCGTGGAAACGGATCGTTTATCTCGGTAGCGGTGGCTTACAGGGCGCAGCACGCGAGTCGGCGCTGAAAGTGCTGGAACTGACGGCGGGTaaa                                                                                                        >  1:478855/1‑225 (MQ=255)                                                                                                                                                                                                                       atgGCCAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGCGAAGGTGTGTTTGGTTACGCACCGTGGAAACGGATCGTTTATCTCGTTAGCGGTGGCTTACAGGGCGCAGCACGCGAGTCGGCGCTGAAAGTGCTGGAACTGACGGCGGGTAAACTGGAGGCCTTTTTTGATTCTCCAACCGGCTTCCTTCCTGGACCCAAAACGc                                                    >  2:175570/1‑274 (MQ=255)                                                                                                                                                                                                                        tgGCCAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGCGAAGGTGTGTTTGGTTACGCACCGTGGAAACGGATCGTTTATCTCGGTAGCGGTGGCTTACAGGGCGCAGCACGCGAGTCGGCGCTGAAAGTGCTGGAACTGACGGCGGGTAAACTgg                                                                                                    <  2:478846/225‑1 (MQ=255)                                                                                                                                                                                                                          gCCAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGCGAAGgtg                                                                                                                                                                                                                   >  2:259758/1‑112 (MQ=255)                                                                                                                                                                                                                          gCCAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGCGAAGGTGTGTTTGGTTACGCACCGTGGAAACGGATCGTTTATCTCGGTAGCGGTGGCTTAc                                                                                                                                                             >  2:429719/1‑166 (MQ=255)                                                                                                                                                                                                                            cAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGt                                                                                                                                                                                                                                                              >  2:693256/1‑67 (MQ=255)                                                                                                                                                                                                                            cAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGc                                                                                                                                                                                                                                                      >  1:41699/1‑75 (MQ=255)                                                                                                                                                                                                                             aGCTGCCTCTCGGTTTTCGCACCGGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGCGAAGGTGTGTTTGGTTACGCACCATGGAAACGGATCGTTTATCTCGGTAGCGGTGGCTTACAGGGCGCAGCACGCGAGTCGGCGCTGAAAGTGCTGGAACTGACGGCGGGTAAACTGGCGGCCTTTTATGATTCTCCAACCGGATTCCGTCATAGACCAAAATCGCTGGTCGa                                             <  1:595395/275‑1 (MQ=255)                                                                                                                                                                                                                              gCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGCGAAGGTGTGtt                                                                                                                                                                                                               <  1:259761/112‑1 (MQ=255)                                                                                                                                                                                                                              gCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGCGAAGGTGTGTTTGGTTACGCACCGTGGAAACGGATCGTTTATCTCGGTAGCGGTGGCTTACAggg                                                                                                                                                         <  1:429726/166‑1 (MQ=255)                                                                                                                                                                                                                                tGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGcc                                                                                                                                                                                                                                                          <  1:693270/67‑1 (MQ=255)                                                                                                                                                                                                                                tGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATc                                                                                                                                                                                                                                                  <  2:41698/75‑1 (MQ=255)                                                                                                                                                                                                                                  cctttcgGTTTTCGCACCTTAGACGATCAACAGCCAAACCTTCCGCGGCGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGCGAAGGTGTGTTTGGTTACGCACCGTTGAAACTGATCGTTTATCTCGGTAGCGGTGGCTTACAGGGCGCAGCACGCGAGTCGGCGCTGAAAGTGCTGGAACTGACGGCGGGTAAACTGGCGGCCTTTTATGATTCTCCAACCGGATTCCGTCATGGACCAAAATCGCTGGTCGATGACg                                        <  1:639509/270‑1 (MQ=255)                                                                                                                                                                                                                                   cTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGCGAAGGTGTGTTTGGTTACGCACCGTGGAAACGGATCGTTTATCTCGGTAGCGGTGGCTTACAGGGCGCAGCACGCGAGTCGGCGCTGAAAGTGCTGGAACTGACGGCGGGTAAACTGGCGGCCTTTTATGATTCTCCAACCGGATTCCGTCATGGACCAAAATCGCTGGTCGATGACGa                                       <  1:152618/275‑1 (MQ=255)                                                                                                                                                                                                                                            ttCGCACCAGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGCGAAGGTGTGTTTGGTTACGCACCGTGGAAACGGCTCGTTTAGCCCGGTAGCGGTGGCTTCCAGGGCGCAGCACGCGAGTCCGCGCCGCCAGGGCTGGAGCTTACGGCGGCTAAACTGGGGGCCTTTTATGATTCCACCACCGGATTGCGTCCTGCACACAAATCGCTGGGCGCTTACTTAACGccgc                               >  2:691152/1‑271 (MQ=255)                                                                                                                                                                                                                                                      agaCTATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATcc                                                                                                                                                                                                                                                 >  2:688188/1‑54 (MQ=255)                                                                                                                                                                                                                                                      agaCGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTGGGCGAttt                                                                                                                                                                                                                              >  2:233797/1‑73 (MQ=255)                                                                                                                                                                                                                                                          taTCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGAc                                                                                                                                                                                                                                             <  1:688202/53‑1 (MQ=255)                                                                                                                                                                                                                                                          gATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGc                                                                                                                                                                                                                          <  1:233799/73‑1 (MQ=255)                                                                                                                                                                                                                                                                  gCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGCGAAGGTGTGTTTGGTTACGCACCGTGGAAACGGATCGTTTATCTCGGTAGCGGTGGCTTACAGGGCGCAGCACGCGAGTCGGCGCTGAAAGTGCTGGAACTGACGGCGGGTAAACTGGCGGCCTTTTATGATTCTCCAACCGGCTTCCGTCATGGACCAAAATCAATGGTCGATGACGAAACGCTGGTGGTGGTATTTGTCTCCAACCAc        >  1:73673/1‑275 (MQ=255)                                                                                                                                                                                                                                                                      aaCCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGCGAAGGTGTGTTTGGTTACGCACCGTGGAAACGGATCGTTTATCTCGGt                                                                                                                                                                          >  1:573383/1‑109 (MQ=255)                                                                                                                                                                                                                                                                         cTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGCGAAGGTGTGTTTGGTTACGCACCGTGGAAACGGATCGTTTATCTCGGTAGCGGTGGCTTACAGGGCGCAGCCCGCGAGTCGGCGCTGAAAGTGCTGGAACTGACGGCGGGTAAACTGGCGGCCTTTTATGATTCTCCAACCGGATTCCGTCATTGACCAAAATCACTGGTCGATGACCAAACGCGGGGGGTGGTATTTGTCTCCAGcccacctaac  >  2:212063/1‑266 (MQ=255)                                                                                                                                                                                                                                                                          ttCCGCGACGTGGCGGATCGGTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGCGAAGGTGTGTTTGGTTACGCACCGTGGAAACGGATCGTTTATCTCGGTAGCg                                                                                                                                                                      <  2:573370/109‑1 (MQ=255)                                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                                                CTCCTTCGGTCGATCCGGCAACAGCCCGGAAAGCGTCGCAGCCGTGGAACTGGCAAATCAATTTGTACCGGAATGCTATCACCTGCCGATCACCTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATCAACAGCGATAACGCGTTTGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGCGAAGGTGTGTTTGGTTACGCACCGTGGAAACGGATCGTTTATCTCGGTAGCGGTGGCTTACAGGGCGCAGCACGCGAGTCGGCGCTGAAAGTGCTGGAACTGACGGCGGGTAAACTGGCGGCCTTTTATGATTCTCCAACCGGATTCCGTCATGGACCAAAATCGCTGGTCGATGACGAAACGCTGGTGGTGGTATTTGTCTCCAGCCACCCTTAC  >  CP009273/3275658‑3276195

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.