New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 3515028	25 (0.620)	8 (0.210)	4/292	NT	22.4%	coding (304/540 nt)	hofN	DNA catabolic putative fimbrial assembly protein
	?	CP009273	= 3515380	32 (0.850)					coding (731/780 nt)	hofM	DNA catabolic putative pilus assembly protein

TGGCGGAGGCGGGGTGATGTGGCGAACCACCAGTCAAAGAACATGTTCATCGCTAACCTTCCTTGTTAACTGATACTCAAATTGCCAGCGTCCCTGCGCATCCTGCTGCGTGGCTCCCCGCTGATTGAGATGAAAAGATGCATCCTGGCGGAGTGACGTTTCTAGTGCGTTTAACGCGGTAATGCTTGTTGTCAGCCCCTTGATCTCCAGCGTTCCCTGCTGCCAGCTTATCGTTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGTAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTGGCTTCGTTATCTGTAAGCTGCGGGCGAGTTGTTGTTCCGCCTGAAGCAAAACTGCGTCTATGCGCGCTTCGGCGCTGCCTGTCAGACGCAGTATTAGCGTTATCCCGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTG  >  CP009273/3514759‑3515295                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                            tGGCGGAGGCGGGGTGATGTGGCGAACCACCAGTCAAAGAACATGTTCATCGCTAACCTTCCTTGTTAACTGATACTCAAATTGCCAGCGTCCCTGCGCATCCTGCTGCGTGGCTCCCCGCTGATTGAGATGAAAAGATGCATCCTGGCGGAGTGACGTTTCTAGTGCGTTTAACGCGGTAATGCTTGTTGTCAGCCCCTTGATCTCCAGCGTTCCCTGCTGCCAGCTTATCGTTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGc                                                                                                                                                                                                                                                                          <  1:214513/273‑1 (MQ=255)                          accaccAGTCAAAGAACATGTTCATCGCTAACCTTCCTTGTTAACTGATACTCAAATTGCCAGCGTCCCTGCGCATCCTGCTGCGTGGCTCCCCGCTGATTGAGATGAAAAGATGCATCCTGGCGGAGTGACGTTTCTAGTGCGTTTAACGCGGTAATGCTTGTTGTCAGCCCCTTGATCTCCAGCGTTCCCTGCTGCCAGCTTATCGTTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCggg                                                                                                                                                                                                                                                <  1:591041/274‑1 (MQ=255)                                                   cGCTAACCTTCCTTGTTAACTGATACTCAAATTGCCAGCGTCCCTGCGCATCCTGCTGCGTGGCTCCCCGCTGATTGAGATGAAAAGATGCATCCTGGCGGAGTGACGTTTCTAGTGCGTTTAACGCGGTAATGCTTGTTGTCAGCCCCTTGATCTCCAGCGTTCCCTGCTGCCAGCTTATCGTTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGTAAATTGTCGCTGGCGCTGCCGTTGc                                                                                                                                                                                                                      >  1:330878/1‑275 (MQ=255)                                                                  ttAACTGATACTCAAATTGCCAGCGTCCCTGCGCATCCTGCTGCGTGGCTCCCCGCTGATTGAGATGAAAAGATGCATCCTGGCGGAGTGACGTTTCTAGTGCGTTTAACGCGGTAATGCTTGTTGTCAGCCCCTTGATCTCCAGCGTTCCCTGCTGCCAGCTTATCGTTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGTAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGt                                                                                                                                                                                                       <  1:325872/275‑1 (MQ=255)                                                                         aTACTCAAATTGCCAGCGTCCCTGCGCATCCTGCTGCGTGGCTCCCCGCTGATTGAGATGAAAAGATGCATCCTGGCGGAGTGACGTTTCTAGTGCGTTTAACGCGGTAATGCTTGTTGTCAGCCCCTTGATCTCCAGCGTTCCCTGCTGCCAGCTTATCGTTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGTAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAActgct                                                                                                                                                                                                <  1:167168/275‑1 (MQ=255)                                                                                       aGCGTCCCTGTGCATCCTGCTGCGTGGCTCCCCGCTGATTGAGATGAAAAGATGCATCCTGGCGGAGTGACGTTTCTAGTGCGTTTAACGCGGTAATGCTTGTTGTCAGCCCCTTGATCTCCAGCGTTCCCTGCTGCCAGCTTATCGTTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGTAGATTGCCAGTCGCGGGTAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCaa                                                                                                                                                                                   >  1:733725/1‑274 (MQ=255)                                                                                                                     cccTCTGATTGGGATGAAAAGCTGCCTCCTGGCTGAGTGACGTTTCTAGTGCGTTTAACTCGGTAATGCTTGTTGTCAGCCCCTTGATCTCCAGCGTTCCCTGCTGCCAGCTTATCGTTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGTAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTGGCTTCGTTATCTGTAAGCTGCGGGCg                                                                                                                                                    <  2:330872/275‑1 (MQ=255)                                                                                                                            aTTGAGATGAAAAGATGCATCCTGGCGGAGTGACGTTTCTAGTTCGTTTAACGCGGTAATGCTTGTTGTCAGCCCCTTGATCTCCAGCGTTCCCTGCTGCCAGCTTATCGTTGTCATCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGgtggagactttgccatcgcgctggggctggcgcttggtaaggcgtactgctgaacccgccaattaattttttgccctggcgacagcaacgccggaccgcttttcttcgtttctggttgctgctgttct                                                                                                                                             >  2:730454‑M1/1‑147 (MQ=255)                                                                                                                                agaTGAAAAGATGCATCCTGGCGGAGTGACGTTTCTAGTGCGTTTAACGCGGTAATGCTTGTTGTCAGCCCCTTGATCTCCAGCGTTCCCTGCTGCGAGCTTATCGTTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGTAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTGGCTTCGTTATCTGTAAGCTGCGGGCGAgttgttgtt                                                                                                                                          <  1:381242/274‑1 (MQ=255)                                                                                                                                      ccaGATGACTCCTGGCGGAGGGACGTTTCTAGTGCGTTTACCGCTGTAATGCTTGTTGTCAGCCCCTTGGTCACCAGCTTTCCCTGTTGCCAGCTTATCGTTGTCAGACAGGCGTGCTCGGGGTAAAGCGCGGCCAGTGCTTCCCGCGCAGATTGCCAGTCGCGTGTAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTGGCGTAACTGCTGTTGCTCCAGCAAAGGTGGCTTCGTTATCTGTAAGCTGCGGGCGAGTTGTTGTTCCGCCTg                                                                                                                                   <  2:719757/273‑1 (MQ=255)                                                                                                                                                    gCGGAGTGACGTTTCTAGTGCGTTTAACGCGGTAATGCTTGTTGTCAGCCCCTTGATCTCCAGCGTTCCCTGCTGCCAGCTTATCGTTGTCAGCCATGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGTAAATTGTTGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTGGCTTCGTTATCTGTAAGCTGCGGGCGAGTTGTTGTTCCGCCTGAAGCAAAACTGCg                                                                                                                      <  1:411372/274‑1 (MQ=255)                                                                                                                                                         gTGACGTTTCGAGTTCGTTTAACGCGGTAATGCTTGTTGTCAGCCCCTTGATCTCCAGCGTTCCCTGCTGCCAGCTTATCGTTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGgtggagactttgccatcgcgctggggctggcgcttgggaaggcgtactgatgaacccgccaattaattttttgccctggcgacagcaacgccggaccgcttttctgcgtttctggttgctgatgttcgttgcgcctctgctgctggccgtcgggat                                                                                                                 <  1:730468‑M1/274‑157 (MQ=255)                                                                                                                                                                    aGTGCGTTTAACGCGGTAATGCTTGTTGTCAGCCCCTTGATCTCCAGCGTTCCCTGCTGCCAGCTTATCGTTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGTAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTGGCTTCGTTATCTGTCAGCTGCGGGCGAGTTGTTGTTCCGACTGCAGCAAAACTACGTCAATGAGCGATCCGgc                                                                                                     >  1:128555/1‑275 (MQ=255)                                                                                                                                                                                     ccgtcTTGTGCTCAGCCCCGTGTGCTCCGGCTGTCCCTTCTGCCTGCTTTTCTTGGGCAGCCAGGCTTGCTCGTGTAAAAGCGCCGCCAGTGCGTCCAGCGCAGATTGCCAGTCGCGGGTAAATTGTCGCTTGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTGGCTTCGTTATCTGTAAGCTGCGGGCGAGTTGTTGTTCCGCCTGAAGCAAAACTGCGTCTATGCGCGCTTCGGCGCTGCCTGTCAGACg                                                                                      <  2:128554/269‑1 (MQ=255)                                                                                                                                                                                         tttgttgTCAGCCCCTTGAGCGCCAGCGTTCCCTGCTGCCATCTTAGCGTTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGGGCTTCCAGCGCAGATTGCCAGTCGCGGGTAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTGGCTTCGTTATCTGTAAGCTGCGGGCGAGTTGTTGTTCCGCCTGAAGCAAAACTGCGTCTATGCGCGCTTCGGCGCTGCCTGTCAGACGCAGTAt                                                                                <  2:733711/274‑1 (MQ=255)                                                                                                                                                                                                         tGATCTCCAGCGTTCCCTGCTGCCAGCTTATCGTTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGTGTAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTGGCTTCGTTATCTGTAAGCTGCGGGCGAGTTGTTGTTTCGCCTGAAGCAAAACTGCGTCTATGCGCGCTTCGGCGCTGCCTGTCAGACGCAGTATTAGCGTTATCCCGACg                                                                <  1:400552/275‑1 (MQ=255)                                                                                                                                                                                                              tcCAGCGTTCCCTGCTGCCAGCTTATCGTTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGgtggagactttgccatcgcgctggggctggcgcttgggaaggcgtactgatgaacccgccaattaattttttgccctggcgacagcaacgccggaccgcttttctgcgtttctggttgctgatgttcgttgcgcctctgctgctggccgtcggg                                                                                                                   >  2:186742‑M1/1‑65 (MQ=255)                                                                                                                                                                                                              tcCAGCGTTCCCTGCTGCCAGCTTATCGTTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGgtggagactttgccatcgcgctggggctggcgcttgggaaggcgtactgatgaacccgccaattaattttttgccctggcgacagcaacgccggaccgcttttctgcgtttctggttgctgatgttcgttgcgcctctgctgctggccgtcg                                                                                                                     >  1:488582‑M1/1‑65 (MQ=255)                                                                                                                                                                                                              tcCAGCGTTCCCTGCTGCCAGCTTATCGTTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGgtggagactttgccatcgcgctggggctggcgcttgggaaggcgtactgatgaacccgccaattaattttttgccctggcgacagcaacgccggaccgcttttctgcgtttctggttgctgatgttcgttgcgcccctgctgctggccgtcggg                                                                                                                   >  1:211118‑M1/1‑65 (MQ=255)                                                                                                                                                                                                              tcCAGCGTTCCCTGCAGCCAGCTTGTCGCTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGgtggagactttgccatcgcgctggggctggcgcttgggaaggcgtactgatgaacccgccaattaattttttgccctggcgacagcaacgccggaccgcttttctgcgtttctggttgntgatgttcgttgcgcctctgctgctggccgtcg                                                                                                                     >  1:512000‑M1/1‑65 (MQ=255)                                                                                                                                                                                                                  gCGTTCCCTGCTGCCAGCTTATCGTTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGgtggagactttgccatcgcgctggggctggcgcttgggaaggcgtactgatgaacccgccaattaattttttgccctggcgacagcaacgccggaccgcttttctgcgtttctggttgctgatgttcgttgcgcctctgctgctggccgtcgggataa                                                                                                               <  1:186744‑M1/219‑159 (MQ=255)                                                                                                                                                                                                                  gCGTTCCCTGCTGCCAGCTTATCGTTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGgtggagactttgccatcgcgctggggctggcgcttgggaaggcgtactgatgaacccgccaattaattttttgccctggcgacagcaacgccggaccgcttttctgcgtttctggttgctgatgttcgttgcgcctctgctgctggccgtcgggat                                                                                                                 <  2:488573‑M1/217‑157 (MQ=255)                                                                                                                                                                                                                  gCGTTCCCTGCTGCCAGCTTATCGTTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGTAAATTTTCGCTGGCGCTGCCGTTGCGACCGCTGTTCGCGTAACTGCTGTTGCTCCAGCaaa                                                                                                                                                                                  >  2:444902/1‑152 (MQ=255)                                                                                                                                                                                                                      tCCCTGCTGCCAGCTTATCGTTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGTAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTg                                                                                                                                                                              <  1:444909/152‑1 (MQ=255)                                                                                                                                                                                                                                         agtGTCAGCCAGGCGTGCTCTGTTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGTAAATTGTCGCTGGNGCTGCCGTNGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTGGCTTCGTTATCTGTAAGCTGCGGGCGAGTTGTTGTTCCGCATGAAGCAAAACTGCGTCTATGCGCGCTTCGGCGCTGCCTGTCAGACGCAGTATTAGCGTTATCCCGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCa                                 <  1:496573/272‑1 (MQ=255)                                                                                                                                                                                                                                             tCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGTAAAtt                                                                                                                                                                                                                                          >  2:446041/1‑69 (MQ=255)                                                                                                                                                                                                                                              cAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCATTGCTGCCAGCGCAGATTGCCAGTCGCGGGTAAATTGTCGCTGGCACTTCCGTCGCGAACGCTGGTCGCGTAACTGCTGTTGCTCCAGGAAACGTGGCTTCGTTATCTGTAAGCTGCGGGCGAGTTGTTGTTCCGCCTGAAGCaa                                                                                                                             >  2:498859/1‑177 (MQ=255)                                                                                                                                                                                                                                                 ccAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGTAAATTGTCg                                                                                                                                                                                                                                      <  1:446048/69‑1 (MQ=255)                                                                                                                                                                                                                                                  cAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGTAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTGGCTTCGTTATCTGTAAGCTGCGGCCGAGTCGTTGTTCTGCCTGAAGCAAAACt                                                                                                                         <  1:498868/177‑1 (MQ=255)                                                                                                                                                                                                                                                      cGTGCTCGGGAAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGTAAATTGTCGCTGGCGCGGCCGTTGCGAACGCGGTTCGCGTAACTGCTGTTGCTACAGCAAACGAGGCTTCGTTATCTGTAAGCTGCGGGCGAGTTGTTGGTCCGCCTGAAGAAAAACTGCGGCTATGCGAGCTTCGGCGCTGCCTGGCAGACGCAGTATTAGCGTTATCGCGACGGCCAGCAGCAGAGGCGAANCAAAAATCACCAACaaaaaaatcctt                   >  2:496564/1‑269 (MQ=255)                                                                                                                                                                                                                                                               gTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGTAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTGGCTTCGTTATCTGTAAGCTGCGGGCGAGTTGTTGTTCCGCCTGAAGCAAAACTGCGTCTATGCGCGCt                                                                                                          >  1:37123/1‑179 (MQ=255)                                                                                                                                                                                                                                                                   aaGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGTAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTGGCTTCGTTATCTGTAAGCTGCGGGCGAGTTGTTGTTCCGCCTGAAGCAAAACTGCGTCTATGCGCGCTTCgg                                                                                                      <  2:37122/179‑1 (MQ=255)                                                                                                                                                                                                                                                                        ccgccgGgtggaggctttgccctcgcgctggggcgggcgcttgggaaggcgtactgatgaacccgccaattaattttttgccctggcgacagcaacgccggaccgcttttctgcgtttctggttgctgatgttcgttgcgcctctgctgctggccgtcgggataacgctaatactgcgtctgacaggcagcgccgaagcgcgcatagacgcagttttgcttcaggcggaacaacaactcgcccgcagcttacagataacgaagccacgtttgct  <  2:296623‑M1/274‑268 (MQ=255)                                                                                                                                                                                                                                                                         cgccAGTGCTTCCAGCGCAGATTGCCATTCGCGGGTAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTGGCTTCGTTATCTGTAAGCTGCGGGCGAGTTGTTGTTCCGCCTGAACCAAAACTGCGTCTATGCGCGCTTCGGCGCTGCCTGTCa                                                                                          >  1:425219/1‑185 (MQ=255)                                                                                                                                                                                                                                                                         cgccAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGTAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTGGCTTCGTTATCTGTAAGCTGCGGTCGAGTTGTTGTTCCGCCTGAAGCAAAACTGCGTCTATGCGCGCTTCGGCGCTGc                                                                                                >  2:124468/1‑179 (MQ=255)                                                                                                                                                                                                                                                                             aGTGCTTCCAGCGCAGATTGCCAGTCGCGGGTAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTGGCTTCGTTATCTGTAAGCTGCGGGCGAGTTGTTGTTCCGCCTGAAGCAAAACTGCGTCTATGCGCGCTTCGGCGCTGCCTGt                                                                                            <  1:124469/179‑1 (MQ=255)                                                                                                                                                                                                                                                                             aGTGCTTCCAGCGCAGATTGCCAGTCGCGGGTAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTGGCTTCGTTATCTGTAAGCTGCGGGCGAGTTGTTGTTCCGCCTGAACCAAAACTGCGTCTATGCGCGCTTCGGCGCTGCCTGTCAGACg                                                                                      <  2:425212/185‑1 (MQ=255)                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                            TGGCGGAGGCGGGGTGATGTGGCGAACCACCAGTCAAAGAACATGTTCATCGCTAACCTTCCTTGTTAACTGATACTCAAATTGCCAGCGTCCCTGCGCATCCTGCTGCGTGGCTCCCCGCTGATTGAGATGAAAAGATGCATCCTGGCGGAGTGACGTTTCTAGTGCGTTTAACGCGGTAATGCTTGTTGTCAGCCCCTTGATCTCCAGCGTTCCCTGCTGCCAGCTTATCGTTGTCAGCCAGGCGTGCTCGGGTAAAAGCGCCGCCAGTGCTTCCAGCGCAGATTGCCAGTCGCGGGTAAATTGTCGCTGGCGCTGCCGTTGCGAACGCTGTTCGCGTAACTGCTGTTGCTCCAGCAAACGTGGCTTCGTTATCTGTAAGCTGCGGGCGAGTTGTTGTTCCGCCTGAAGCAAAACTGCGTCTATGCGCGCTTCGGCGCTGCCTGTCAGACGCAGTATTAGCGTTATCCCGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTG  >  CP009273/3514759‑3515295

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.