New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 3515028	25 (0.620)	8 (0.210)	4/292	NT	22.4%	coding (304/540 nt)	hofN	DNA catabolic putative fimbrial assembly protein
	?	CP009273	= 3515380	32 (0.850)					coding (731/780 nt)	hofM	DNA catabolic putative pilus assembly protein

AGCAAACGTGGCTTCGTTATCTGTAAGCTGCGGGCGAGTTGTTGTTCCGCCTGAAGCAAAACTGCGTCTATGCGCGCTTCGGCGCTGCCTGTCAGACGCAGTATTAGCGTTATCCCGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGTCTCCACCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCTTTCGGGATCAACGGATAACGCTGCCGCCAGCTCCTTCGCGCTAGTCATCCCCACCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGCCCACAGCCACTGTTCGTTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAATCGCTGTAATGCACTGGCATCCGGGGTGATCGCG  >  CP009273/3515114‑3515646                                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                                           aGCAAACGTGGCTTCGTTATCTGTAAGCTGCGGGCGAGTTGTTGTTCCGCCTGAAGCAAAACTGCGTCTATGCGCGCTTCGGCGCTGCCTGTCAGACGCAGTATTAGCGTTATCCCGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCCGCCCCAGCGCGAGGGCAAAGCCTCCACccggcgg                                                                                                                                                                                                                                                                     <  2:296623‑M2/274‑8 (MQ=255)                               cGGGCGAGTTGTTGTTCCGCCTGAAGCAAAACTGCGTCTATGCGCGCTTCGGCGCTGCCTGTCAGACGCAGGATTAGCGTTATCCCGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTAGCCAGGGCAAACAATTAATGCGCGGGTTCCTCAGTACGCCTTCCCACACGCCCGCCCCAGCGCACGGGAAAAGGCTCCACCTGGCGGCGGCAGCGGCGGCGAACGCACAGAAACGGc                                                                                                                                                                                                                                       >  2:701785/1‑274 (MQ=255)                                                agagaccggCAAACCTCCGTCTATGCGCGCTTCGGCGCCGCCGGTCAGCCGCAGTATTAGCGTTATCCACACGGCCAGAAGCAGGGGCGAAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGTCTCCACCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATcc                                                                                                                                                                                                                     <  2:662077/267‑1 (MQ=255)                                                  ccTGAAGCAAAACTGCGTCTATGCGCGCTTCGGCGCTGCCTGTCAGACGCAGTATTAGCGTTATCCCGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCGTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGTCTCCACCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGACCCCCAGGGATCAAAACCGc                                                                                                                                                                                                                   >  1:383611/1‑275 (MQ=255)                                                                 cGTCTATGCGCGCTTCGGCGCTGCCTGTCAGACGCAGTATTAGCGTTATCCCGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTAATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGTCTCCAACTGGCTGCGGTAGCGGCGGCTGACGAACAGAACCGACCTCCCAGGGACCAAATCCGCCTTCGCCACATATc                                                                                                                                                                                                     >  1:218988/1‑274 (MQ=255)                                                                   tCTATGCGCGCTTCGGCGCTGCCTGTCAGACGCAGTATTAGCGTTATCCCGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGCATCATCAGTACNCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGTCTCCACCTGGCGGCGGTAGCGGCGGCGGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGccccctgtctct                                                                                                                                                                                                  >  1:662091/1‑265 (MQ=255)                                                                     tgtgcacccgcaggCGCGGCCAGTGAGACGCAGGATTAGCGGTATCCCGACGGCCAGCAGCAGAGGCGCAACGAACATCAGAAACCAGAAACGCAGAAAAGCGGTCCGGCGTGGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGTCTCCACCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATcgcg                                                                                                                                                                                                  <  2:218986/261‑1 (MQ=255)                                                                                  gcgcTGCCTGTCAGACACAGTATTAGCGTTATCCCGACGCCCAGCAGCAGAGGCGCAACGATCATCAGCAACCAGAAACGCATAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTCATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGTCTCCACCTGGCGGCGGTAGCTGCGGCTGACGAACAGAAACGGCCTCCGAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCTTTCGGGATCa                                                                                                                                                                                   <  1:701799/275‑1 (MQ=255)                                                                                                      tATTAGCGTTATCCCGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGTCTCCACCTGGCGGCGGTAGCTGCGGCCGACGAACAGAAACGGCCGCCCAGGGATCAAATCCGCCTTCGCAAAATAACGCGACGCTTTCGGGGTAAACGGATACCCCTGGCGCCAg                                                                                                                                                               >  2:147457/1‑275 (MQ=255)                                                                                                              ttATCCCGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGTCTCCACctggcggcgcttttacccgagcacgcctggctgacaacgataagctggcagcagggaacgc                                                                                                                                                                                                               <  1:186744‑M2/219‑62 (MQ=255)                                                                                                              ttATCCCGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGTCTCCACCTGGCGGCGGTAGCGGCGGCTGACGACCAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCTTTCGGGATCAACGGATAACGCTGCCGCCAGCCCCTTc                                                                                                                                                        >  1:358452/1‑274 (MQ=255)                                                                                                                aTCCCGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAACAATTACTTGGCGTGTTCATCCGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGTCTCCACCTTGCGGCGGTAGGGGCGGCTGACGACCAGAAACGGCCTCCCAGGGATCCCCTCCGCCTTCGCCACCTCTCCCCCCCCCTTCGGGCTCACCGCATACCGATGCCGCCAGCTCCTTccc                                                                                                                                                      >  1:254755/1‑272 (MQ=255)                                                                                                                aTCCCGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGTCTCCACctggcggcgcttttacccgagcacgcctggctgacaacgataagctggcagcagggaacgctggagatcaaggggctgacaacaagcattaccgcgttaaacgaactcgaaacgtcac                                                                                                                                                      <  1:730468‑M2/274‑119 (MQ=255)                                                                                                                aTCCCGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGTCTCCACctggcggcgcttttacccgagcacgcctggctgacaacgataagctggcagcagggaacgc                                                                                                                                                                                                               <  2:488573‑M2/217‑62 (MQ=255)                                                                                                                aTCCCGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGTCTCCACCTGGCGGCGGTAGCGGCGGCTGACGa                                                                                                                                                                                                                                                  >  1:344/1‑182 (MQ=255)                                                                                                                aTCCCGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGACAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGTCTCCACCTGGCGGCGGTAGCGGCGGCTGACGAACAGACACAGCCCCCCCGGGATCACATCCGCCTTCGCCACAAATCGCGACGCTCTCGGGATAACCGGATAACTCTcccgcccccccctgcgcc                                                                                                                                                     >  2:29686/1‑263 (MQ=255)                                                                                                                  cccGACGGCCAGCAGCAGGGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGTCTCCACctggcggcgcttttacccgagcacgcctggctgacaacgataagctggcagcagggaacgctgga                                                                                                                                                                                                           >  1:211118‑M2/1‑154 (MQ=255)                                                                                                                  cccGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGTCTCCACctggcggcgcttttacccgagcacgcctggctgacaacgataagctggcagcagggaacgctgga                                                                                                                                                                                                           >  2:186742‑M2/1‑154 (MQ=255)                                                                                                                    cGACGGCCAGCAGCAGAGGCGCAACGAACATCANCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGTCTCCACctggcggcgcttttacccgagcacgcctggctgacagcgacaagctggctgcagggaacgctgga                                                                                                                                                                                                           >  1:512000‑M2/1‑152 (MQ=255)                                                                                                                    cGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGTCTCCACctggcggcgcttttacccgagcacgcctggctgacaacgataagctggcagcagggaacgctgga                                                                                                                                                                                                           >  1:488582‑M2/1‑152 (MQ=255)                                                                                                                    cGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCATTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGTCTCCACCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCTTTCGGGATCa                                                                                                                                                                                   <  1:390581/241‑1 (MQ=255)                                                                                                                                            agaACAGCAGCAACCAGAAACGAAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCAGCAGTACGCCTTACCAAGCGCCAGCCCCAGCGCGATGGCAAAGTCTCCACctggcggcgcttttacccgagcacgcctggatgacaacgataagctggcagcagggaacgctggagatcaaggggctgacaacaagcattaccgcgttaaacgaactagaaacgtcactccgccaggatgcatcttttcatctcaat                                                                                                                         >  2:730454‑M2/2‑128 (MQ=255)                                                                                                                                             gAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGTCTCCACCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCTTTCGGGATCAACGGATAACGCTGCCGCCAGCTCCTTCGCGCTAGTCATCCCCACCGCCAGTTTGCGcc                                                                                                                         <  1:296628/274‑1 (MQ=255)                                                                                                                                                                       aaGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGTCTCCACCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCTTTCGGGATCAACGGCTAACGCTGCCGCCAGCTCCTTCCCGCTAGTCATCCCCACCGCCAGTTTGCGCCCCCAGCTATAGCCCGTCGccccaagc                                                                                               >  1:431819/1‑269 (MQ=255)                                                                                                                                                                                         gTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGTCTCCACCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCTTTCGGGATCAACGGATAACGCTGCCGCCAGCTCCTTCGCGCTAGTCATCCCCACCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGCCCACAGCCACTGTTCGTTATCACg                                                                              <  1:29687/273‑1 (MQ=255)                                                                                                                                                                                                                         atcaGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGTCTCCACCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATCGCGACGc                                                                                                                                                                                              >  2:216990/1‑129 (MQ=255)                                                                                                                                                                                                                             gTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGTCTCCACCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCTTTc                                                                                                                                                                                          <  1:216992/129‑1 (MQ=255)                                                                                                                                                                                                                               aCGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGTCTCCACCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCTTTCGGGATCAACGGATAACGCTGCCGCCAGCTCCTTCGCGCTAGTCATCCCCAGCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGCCCACAGCCACTGTTCGTTATCACGCCAGGCCAGACATTGCTGATGAAAAGGTAAAAAAAGCAg                                       >  1:382536/1‑274 (MQ=255)                                                                                                                                                                                                                                cGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGTCTCCACCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCTTTCGGGATCAACGGATaa                                                                                                                                                                           >  1:9014/1‑141 (MQ=255)                                                                                                                                                                                                                                cGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGTCTCCACCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCTTTCGGGATCAACGGATAACGCTGCCGCCAGCTCCTTCGCGCTAGTCATCCCCACCGCCCGTTTGCGCCCCCCGCCACAGCCCGTCCCCCACAGCCACTGTTCCTTCCACCGCCAGGCAAGACATTCCTGATGACAAGGTAAAAAAGGccgc                                      >  2:724997/1‑271 (MQ=255)                                                                                                                                                                                                                                   cTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGTCTCCACCTGGCGGCGGTAGCGGCGGCTGa                                                                                                                                                                                                                                                     >  2:50042/1‑64 (MQ=255)                                                                                                                                                                                                                                    ttCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGTCTCCACCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCTTTCGGGATCAACGGATAACGCt                                                                                                                                                                       <  2:9014/141‑1 (MQ=255)                                                                                                                                                                                                                                     tCCCAAGCGCCAGCCCCCGCGCGATGGCAAAGGCTCCACCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCTTTCGGGCTCAACGGATAACGCTGCCGCCAGCTCCTTCGCGCTAGTCATCCCCACCGACAGTTTGCGCCCCCAGCTATAGCGCGTCGCCCACAGCCACTGTTCGTTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAATCg                                 <  1:607972/274‑1 (MQ=255)                                                                                                                                                                                                                                       ccAAGCGCCAGCCCCAGCGCGATGGCAAAGTCTCCACCTGGCGGCGGTAGCGGCGGCTGACGaa                                                                                                                                                                                                                                                 <  1:50043/64‑1 (MQ=255)                                                                                                                                                                                                                                         aaGCGCCAGCCCCAGCGCGATGGCAAAGTCTCCACCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGAGATCAAATCCGCCTTCGCCACATATCGCGACGCTTTCGGGATCAACGGATAACGCTGCCGCCAGCTCCTTCGCGCTAGTCATCCCCACCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGCCCACAGCCACTGTTCGTTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAATCGCTGTa                            <  1:725011/275‑1 (MQ=255)                                                                                                                                                                                                                                              ccAGCCCCAGCGCGATGGCAAAGTCTCCACCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCTTTCGGGATCAACGGATAACGCTGCCGCCAGCTCCTTCGCGCTAGTCATCCCCACCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGCCCACAGCCa                                                                                             <  1:328453/205‑1 (MQ=255)                                                                                                                                                                                                                                                        cgcgATGGCAAAGTCTCCACCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCTTTCGGGATCAACGGATAACGCTGCCGCCAGCTCCTTCGCGCTAGTCATCCCCACCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGCCCACAGCCACTGTTCGTTATCCCgccaggc                                                                        >  1:236592/1‑216 (MQ=255)                                                                                                                                                                                                                                                            aTGGCAAAGTCTCCACCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCTTTCGGGATCAACGGATAACGCTGCCGCCAGCTCCTTCGCGCTAGTCATCCCCACCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGCCCACAGCCACTGTTCGTTATCACGCCAGGCCAGa                                                                    <  2:236590/216‑1 (MQ=255)                                                                                                                                                                                                                                                             tGGCAAAGTCTCCACCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCTTTCGGGATCAACGGATAACGCTGCCGCCAGCTCCTTCGCGCTAGTCATCCCCACCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGCCCACAg                                                                                                >  1:204505/1‑187 (MQ=255)                                                                                                                                                                                                                                                                 aaaGTCTCCACCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCTTTCGGGATCAACGGATAACGCTGCCGCCAGCTCCTTCGCGCTAGTCATCCCCACCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGCCCACAGCCAc                                                                                            <  2:204503/187‑1 (MQ=255)                                                                                                                                                                                                                                                                   aGTCTCCGCGTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCTTGCGGGATCAACGGATAACGCTGCCGCCAGCTCCNTCGCGCTAGTCATACCCACCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGCCCACAGCCACTGTTCGTTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAATCGCTGTAATGCACTGGCATCCGGGGTGATcgcg  <  1:632931/275‑1 (MQ=255)                                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                                           AGCAAACGTGGCTTCGTTATCTGTAAGCTGCGGGCGAGTTGTTGTTCCGCCTGAAGCAAAACTGCGTCTATGCGCGCTTCGGCGCTGCCTGTCAGACGCAGTATTAGCGTTATCCCGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGTCTCCACCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCTTTCGGGATCAACGGATAACGCTGCCGCCAGCTCCTTCGCGCTAGTCATCCCCACCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGCCCACAGCCACTGTTCGTTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAATCGCTGTAATGCACTGGCATCCGGGGTGATCGCG  >  CP009273/3515114‑3515646

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.