New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	3949028 =	34 (0.850)	5 (0.130)	5/294	NT	10.4%	coding (338/1545 nt)	ilvA	L‑threonine dehydratase, biosynthetic; also known as threonine deaminase
	?	CP009273	3949257 =	54 (1.420)					coding (567/1545 nt)	ilvA	L‑threonine dehydratase, biosynthetic; also known as threonine deaminase

TACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTCTTGATAACGTCATTCTGGTGAAGCGCGAAGATCGCCAGCCAGTGCACAGCTTTAAGCTGCGCGGCGCATACGCCATGATGGCGGGCCTGACGGAAGAACAGAAAGCGCACGGCGTGATCACTGCTTCTGCGGGTAACCACGCGCAGGGCGTCGCGTTTTCTTCTGCGCGGTTAGGCGTGAAGGCCCTGATCGTTATGCCAACCGCCACCGCCGACATCAAAGTCGACGCGGTGCGCGGCTTCGGCGGCGAAGTGCTGCTCCACGGCGCGAACTTTGATGAAGCGAAAGCCAAAGCGATCGAACTGTCACAGCAGCAGGGGTTCACCTGGGTGCCGCCGTTCGACCATCCGATGGTGATTGCCGGGCAAGGCACGCTGGCGCTGGAACTGCTCCAGCAGGACGCCCATCTCGACCGCGTATTTGTGCCAGTCGGCGGCGGCGGTCTGGCTGCTGGCGTGGCGGTGCTGATCAAACAACTGA  >  CP009273/3948766‑3949300                                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                                                 tACTAGGCGGAGCAGGTTACGCCGCTCCAAAAAATGGAAAAACTGTCGTCGCTTCTTGATACCGTCATTCTGGTGAAGCGCGAAGATCGCCAGCCAGTGCACAGCTTTAAGCTGCGCGGCGCATACGCCATGATGGCGGGCCTGACGGAAGAACAGAAAGCGCACGGCGTGATCACTGCTTCTGCGGGTAACCACGCGCAGGGCGTCGCGTTTTCTTCTGCGCGGTTAGGCGTGAAGGCCCTGATCGTTATGCCAACCGCCACCGCCGACATCaa                                                                                                                                                                                                                                                                      <  2:731318/275‑1 (MQ=255)         ggcgCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTCTTGATAACGTCATTCTGGTGAAGCGCGAAGATCGCCAGCCAGTGCACAGCTTTAAGCTGCGCGGCGCATACGCCATGATGGCGGGCCTGACGGAAGAACAGAAAGCGCACGGCGTGATCACTGCTTCTGCGGGTAACCACGCGCAGGGCGTCGCGTTTTCTTCTGCGCGGTTAGGCGTGAAGGCCCTGATCGTTATGCCAACCGCCACCGCCGACATCAAAGTCGAcg                                                                                                                                                                                                                                                              >  1:731332/1‑275 (MQ=255)                               aaaaTGGAAAAACTGTCGTCTCGTCTTGATAACGTCATTCTGGTGAAGCGCGAAGATCGCCAGCCAGTGCACAGCTTTAAGCTGCGCGGCGCATACGCCATGATGGCGGGCCTGACGGAAGCACAGATAGCGCACGGCGTGATCACTGCTTCTGCGGGTAACCACGCGCAGGGCGTCGCGTTTTCTTCTGCGCGGTTAGGCGTGAAGGCCCTGATCGTTATGCCAACCGCCACCGCCGACATCAAAGTCGACGCGGTGCGCGGCTTCGgcggcg                                                                                                                                                                                                                                         <  1:654532/274‑1 (MQ=255)                                   tGGAAAAACTGTCGTCGCGTCTTGATAACGTCATTCTGGTGAAGCGCGAAGATCGCCAGCCAGTGCACAGCTTTAAGCTGCGCGGCGCATACGCCATGATGGCGGGCCTGACGGAAGAACAGAAAGCGCACGGCGTGATCACTGCTTCTGCGGGTAACCACGCGCAGGGCGTCGCGTTTTCTTCTGCGCGGTTAGGCGTGAAGGCCCTGATCGTTATGCCAACCGCCACCGCCGACATCAAAGTCGACGCGGTGCGCGGCTTCGGCGGCGAAGtg                                                                                                                                                                                                                                    <  1:189270/275‑1 (MQ=255)                                           cTGTCTTCGCGTCTTGATAACGTCATTCTGGTGAAGCGCGAAGATCGCCAGCCAGTGCACAGCTTTAAGCTGCGCGGCGCATACGCCATGATGGCGGGCCTGACGGAAGAACAGAANGCGCACGGCGGCATCACTGCTTCTGCGGGTAACCACGCGCAGGGCGTCGCGTTTTCTTCTGCGCGGTTAGGCGTGAAGGCCCTGATCGTTATGCCAACCGCCACCGCCGACATCAAAGTCGACGCGGTGCGCGGCTTCGGCGGCGAAGTGCTGCTCCa                                                                                                                                                                                                                            <  1:662325/275‑1 (MQ=255)                                             gtcgtcGCGTCTTGATAACGTCATTCTGGTGAAGCGCGAAGATCGCCAGCCAGTGCACAGCTTTAAGCTGCGCGGCGCATACGCCATGATGGCGGGCCTGACGGAAGAACAGAAAGCGCCCGGCGTGCTCACTTCTTCTGCGGGTAACCACCCCCAGGGCGTCGCGTTTTCTTCTCCTCGTGTACGCGTGACGGACCTCATCGTTATGCCAACCTCCACCGCCGACAGCAACGGCAACGCGGTGCGCGTCGTGCGCGGCGCACTGCGCCTccc                                                                                                                                                                                                                            >  2:658020/1‑272 (MQ=255)                                                               cGTCATTCTGGTGAAGCGCGAAGATCGCCAGCCAGTGCACAGCTTTAAGCTGCGCGGCGCATACGCCATGATGGCGGGCCTCACGGAAGAACAGAAAGCGCACGGCGTGATCACTGCTTCTGCGGGTAACCACGCGCAGGGCGTCGCGTTTTCTTCTGCGCGGTTAGGCGTGAAGGCCCTGATCGTTATGCCAACCGCCACCGCCGACATCAAAGTCGACGCGGTGCGCGGCTTCGGCGGCGAAGTGCTGCTCCACGGCGCGAACTTTGATGAAg                                                                                                                                                                                                        >  1:42032/1‑275 (MQ=255)                                                                          tGAAGCGGTAAGATCGCCAGCCAGTGCACAGCTTTAAGCTGCGCGGCGCATACGCCATGATGGCGGGCCTGACGGAAGAACAGAAAGCGCACGGCGTGATCACTGCTTCTGCGGGTAACCACGCCCAGGGCGTCGCGTTTTCTTCTGCGCGGTTAGGCGTGAAGGCCCTGATCGTTATGCCAACCGCCACCGCCGACATCAAAGTCGACGCGGTGCGCGGCTTCGGCGGCGAAGTGCTGCTCCACGGCGCGAACTTTGATGAAGCGAAAGCCaa                                                                                                                                                                                              <  1:608021/274‑1 (MQ=255)                                                                                        gatgcgttttaccgctacgccttcagcaaatagccctacgcgcggcagatcaaccggatgacccgcatccagcgctgctttcaggcaggcggagtcttccgcttctacggcgatcactttgatttgcggcatcagttgtttgatcagcaccgccacgccagcagccagaccgccgCCGCCGACATCAAAGTCGACGCGGTGCGCGGCTTCGGCGGCGAAGTGCTGCTCCACGGCGCGAACTTTGATGAAGCGAAAGCCAAAGCGATCGAACTGTc                                                                                                                                                                               <  1:178726‑M1/100‑1 (MQ=255)                                                                                                cgTGCACAGCTTGCAGCTGCCCCGCGCCTACGCCATGAGGGCGGGCCTGACGGAAGAACAGAACGCGCACGCCGTGGTCACTGCTTCGGCGGGTAACCACGCCCAGTGCGTCGCGTTTTCTGCTGCGCGGTTAGGCGTGAAGGCCCTGATCGTTATGCCCACCGCCACCGCCGACATCAAAGTCGACGCGGTGCGCGGCTTCGGCGGCGAAGTGCTGCTCCACGGCGCGAACTTTGATGAAGCGAAAGCCAAAGCGATCGAACTGTCAcagcagc                                                                                                                                                                       <  2:130638/274‑1 (MQ=255)                                                                                                agTGCACAGCTTTAAGCTGCGCGGCGCATACGCCATGATGGCGGGCCTGACGGAAGAACAGAAAGCGCACGGCGTGATCACTGCTTCTGCGGGTAACCACGCGCAGGGCGTCGCGTTTTCTTCTGCGCGGTTAGGCGTGAAGGCCCTGATCGTTATGCCAACCGCCACCGCCGACATCAAAGTCGACGCGGTGCGCGGCTTCGGCGGCGAAGTGCTGCTCCACGGCGCGAACTTTGATGAAGCGAAAGCCAAAGCGATCGAACGGTCAcagcagc                                                                                                                                                                       >  1:130639/1‑275 (MQ=255)                                                                                                            tAAGCTGCGCGGCGCATACGCCATGATGGCGGGCCTGACGGAAGAACAGAAAGCGCACGGCGTGATCACTGCTTCTGCGGGTAACCACGCGCAGGGCGTCGCGTTTTCTTCTGCGCGGTTAGGCGTGAAGGCCCTGATCGTTATGCCAACCGCCACCGCCGACATCCAAGTCGACGCGGTGCGCGGCTTCGGCGGCGAAGTGCTGCTCCACGGCGCGAACTTTGATGACGCGACAGCCAAAGCGATCGAAATGTCACAGCAGCAGGAATTAACCt                                                                                                                                                           >  1:457848/1‑275 (MQ=255)                                                                                                              aGCTGCGCGGCGCATACGCCATGATGGCGGGCCTGACGGAAGAACAGAAAGCGCACGGCGTGATCACTGCTTCTGCGGGTAACCACGCGCAGGGCGTCGCGTTTTCTTCTGAGCGGTTAGGCGTGAAGGCCCTGATCGTTATGCCAACCACCACCGCCGACATCAAAGGCGACGAGGTGCGCGGcg                                                                                                                                                                                                                                                  >  2:78292/1‑185 (MQ=255)                                                                                                                  gcgcGGCGCATACGCCATGATGGCGGGCCTGACGGAAGAACAGAAAGCGCACGGCGTGATCACTGCTTCTGCGGGTAACCACGCGCAGGGCGTCGCGTTTTCTTCTGCGCGGTTAGGCGTGAAGGCCCTGATCGTTATGCCAACCGCCACCGCCGACATCAAAGTCGACGCGGTGCGCGGCTTcgg                                                                                                                                                                                                                                              <  1:78293/186‑1 (MQ=255)                                                                                                                   cgcgGCGCATACGCCCTGATGACATGCCTAACGGAAGAACAGAAAGCGCACGGCGTGATCACTGCTTCTGCGGGTAACCACGCGCAGGGCGTCGCGTTTTCTTCTGCGCGGTTAGGCGTGAAGGCCCTGATCGTTATGCCAACCGCCACCGCCGACATCAAAGTCGACGCGGTGCGCGGCTTCNGCGGCGAAGTGCTGCTCCACGGCGCGAACTTTGATGAAGCGAAAGCCAAAGCGATCGAACTGTCACAGCAGCAGGGGTTCACCTAGGTgc                                                                                                                                                     >  1:508958/1‑274 (MQ=255)                                                                                                                   cgcgGCGCATACGCCATGATGGCGGGCCTGACGGAAGAACAGAAAGCGCACGGCGTGATCACTGCTTCTGCGGGTAACCACGCGCAGGGCGTCGCGTTTTCTTCTGCGCGGTTAGGCGTGAAGGCCCTGATCGTTATGCCAACCGCCACCGCCGa                                                                                                                                                                                                                                                                            >  2:527704/1‑155 (MQ=255)                                                                                                                   cgcgGCGCAGAAGCCATGATGGCGGGCCTGACGGAAGAACAGAAAGCGCACGGCGTGATCACTGCTTCTGCGGGTAACCACGCGCAGGGCGTCGCGTTTTCTTCTGCGCGGTTAGGCGTGAAGGCCCTGATCGTTATGCCAACCGCCACCGCCGACATCAAAGTCGACGCGGTGCGCGGCTTCGGCGGCGAAGTGCTGCTCCACGGCGCGAACTTTGATGAAGCGAAAGCCAAAGCGATCGAACTGTCACAGCAGCAGGGGTTCACCTGGGTgc                                                                                                                                                     <  1:718455/274‑1 (MQ=255)                                                                                                                      tagccctacgcgcggcagatcaaccggatgacccgcatccagcgctgctttcaggcaggcggagtcttccgcttctacggcgatcactttgatttgcggcatcagttgtttgatcagcaccgccacgccagcagccagaccgccgCCGCCGACATCAAAGTCGACGCGGTGCGCGGCTTCGGCGGCGAAGTGCTGCTCCACGGCGCGAACTTTGATGAAGCGAAAGCCAAAGCGATCGAACTGTCAAAGAAGCAGGGGTTCACATGGgtgccgac                                                                                                                                                 <  1:607500‑M1/130‑3 (MQ=255)                                                                                                                       gcgcATACGCCATGATGGCGGGCCTGACGGAAGAACAGAAAGCGCACGGCGTGATCACTGCTTCTGCGGGTAACCACGCGCAGGGCGTCGCGTTTTCTTCTGCGCGGTTAGGCGTGAAGGCCCTGATCGTTATGCCAACCGCCACCGCCGACATc                                                                                                                                                                                                                                                                        <  1:527713/155‑1 (MQ=255)                                                                                                                                  atgatgGCGGGCCTGACGGAAGAACAGAAAGCGCACGGCGTGATCACTGCTTCTGCGGGTAACCACGCGCAGGGCGTCGCGTTTTCTTCTGCGCGGTTAGGCGTGAAGGCCCTGATCGTTATGCCAACCGCCACCGCCGACATCAAAGTCGACGCGGTGCGCGGCTTCGGCGGCGAAGTGCTGCTCCACGGCGCGAACTTTGATGAAGCGAAAGCCAAAGCGATCGAACTGTCACAGCAGCAGGGGTTCACCTGGGTGCCGCCGGTCGACCATcc                                                                                                                                     >  1:594820/1‑275 (MQ=255)                                                                                                                                           ggCCTGACGGAAGAACAGAAAGCGCACGGCGTGATCACTGCTTCTGCGGGTAACCACGCGCAGGGCGTCGCGTTTTCTTCTGCGCGGTTAGGCGTGAAGGCCCTGATCGTTATGCCAACCGCCACCGCCGACATCAAAGTCGACGCGGTGCGCGGCTTCGGCGGCGAAGTGCTGCTCCACGGCGCGAACTTTGATGAAGCGAAAGCCAAAGCGATCGAACTGTCACAGCAGCAGGGGTTCACCTGGGTGCCGCCGTTCGACCATCCGATGGTGa                                                                                                                             >  1:37644/1‑274 (MQ=255)                                                                                                                                                      agaaCAGAAAGCGCACGGCGTGATCACTGCTTCTGCGGGTAACCACGCGCAGGGCGTCGCGTTTTCTTCTGCGCGGTTAGGCGTGAAGGCCCTGATCGTTATGCCAACCGCCACCGCCGACATCAAAGTCGACGCGGTGCGCGGCTTCGGCGGCGAAGTGCTGCTCCACGGCGAGAACTTTGANGAAGCGAANGACAAAGCGATCGAACTATCACAGCAGCAgg                                                                                                                                                                    >  1:497448/1‑224 (MQ=255)                                                                                                                                                             aaaGCGCACTGCGTGATAACTGCTTCTGCGGGTAACCACGCGCAGGGCGTCGCGTTTTCTTCTGCGCGGTTAGGCGTGAAGGCCCTGATCGTTATGCCAACCGCCACCGCCGACATCAAAGTCGACGCAGTGCGCGGCTTCGGCGGCGAAGTGCTGCTCCACGGCGCGAACTTTGATGAAGCGAAAGCCAAAGCGATCGAACTGTCACAGCAGCAGGGGTTCACCTGGGTGCCGCCGTTCGACCATCCGATGGTGATTGCCGGGCAAGGCAcgct                                                                                                          <  1:658034/275‑1 (MQ=255)                                                                                                                                                                   tgctttcaggcaggcggagtcttccgcttctacggcgatcactttgatttgcggcatcagttgtttgatcagcaccgccacgccagcagccagaccgccgcc                                                                                                                                                                                                                                                                                 >  1:20716‑M1/101‑102 (MQ=255)                                                                                                                                                                   cACGGCGTGATCACTGCTTCTGCGGGTAACCACGCGCAGGGCGTCGCGTTTTCTTCTGCGCGGTTAGGCGTGAAGGCCCTGATCGTTATGCCAACCGCCACCGCCGACATCAAAGTCGACGCGGTGCGCGGCTTCGGCGGCGAAGTGCTGCTCCACGGCGCGAACTTTGATGAAGCGAAAGCCAAAGCGATCGAACTGTCACAGCAGCAGGGGTTCACCTGGGTGCCGCCGt                                                                                                                                               >  1:435008/1‑232 (MQ=255)                                                                                                                                                                     ctttcaggcaggcggagtcttccgcttctacggcgatcactttgatttgcggcatcagttgtttgatcagcaccgccacgccagcagccagaccgccgCCGCCGa                                                                                                                                                                                                                                                                            <  2:333039‑M1/7‑1 (MQ=255)                                                                                                                                                                                  gCTTCTGCGGGTAACCACGCGCAGGGCGTCGCGTTTTCTTCTGCGCGGTTAGGCGTGAAGGCCCTGATCGTTATGCCAACCGCCACCGCCGACATCAAAGTCGACGCGGTGCGCGGCTTCGGCGGCGAAGTGCTGCTCCACGGCGCGAACTTTGATGAAGCGCAAGCCAAAGCGATCGAACTGTCACAGCAGCAGGGGTTCACCTCAGTGCCGCCGTTCGACCATCCGATGGTGATTGCCGGGCAAGGCGGGCTGGCGCTCGAGCTCCTCcacc                                                                                      >  2:518479/1‑272 (MQ=255)                                                                                                                                                                                  gCTTCTGCGGGTAACCACGCGCAGGGCGTCGCGTTTTCTTCTGCGCGGTTAGGCGTGAAGGCCCTGATCGTTATGCCAACCGCCACCGCCGACATCAAAGTCGACGCGGTGCGCGGCTTCGGCGGCGAAGTGCTGCTCCACGGCGCGAACTTAGATGAAGCGAAAGCCAAAGCGATCGAACTGTCACAGCAGCAGGGGTTCACCTGGGTGCCGCCGTTCGACCATCCGATGGTGATTGCCGGGCAAGGCACGCTGGCGCTGGAACTGCTCcacc                                                                                      >  1:649700/1‑272 (MQ=255)                                                                                                                                                                                   tttgtGCGGGTTCGCACGCGCCGTGCGTCGCGTTTTCTTCTGCGCGGTTAGGCGGTACGGCCCTGATCGTTATGCCAACCGCCACCGCCGACATCAAAGTCGACGCGGTGCGCGGCTTCGGCGGCGAAGTGCTGCTCCACGGCGCGAACTTTGATGAAGCGAAAGCCAAAGCGATCGAACTGTCACAGCAGCAGGGGTTCACCTGTGTGCCGCCGTTCGACCATCCGATGGTGATTGCCGGGCAAGGCACGCTGGCGCTGGAACTGCTCcagcag                                                                                    <  2:37643/271‑1 (MQ=255)                                                                                                                                                                                    ttCTGCGGGTACCCACGCGCAGGGCGTGGCGTTTTCTTCTGCGCGGTTAGTCGGGAAGGCCCTGATCGTTATGACAACCGCCACCGCCGACATCAAAGTCGACGCGGTGCGCGGCTTCGGCGGCGAAGTGCTGCTCCACGGCGCGAACTTTGATGAAGCGAAAGCCAAAGCGATCGAACTGTCACAGCAGCAGGGGTTCACCTGGGTGCCGCCGTTCGACCATCCg                                                                                                                                    <  1:126316/226‑1 (MQ=255)                                                                                                                                                                                       tGCGGGTATCCACGCGCAGGGCGTCGCGTTTTCTTCTGCGCGGTTAGGCGTGAAGGCCCTGATCGTTATGCCAACCGCCACCGCCGACATCNAAGTCGACGCGGTGCGCGGCTTCGGCGGCGAAGTGCTGCTCCACGGCGCGAACTTTGATGAAGCGAAAGCCAAAGCGATCGAACTGTCACAGCAGCAGGGGTTCACCTGGGTGCCGCCGTTCGACCATCCGATGGTGATTGCCGGGCAAGGCACGCTGCCGCTGGAATTGCTCCAGCAGGACg                                                                                <  1:518488/275‑1 (MQ=255)                                                                                                                                                                                        gCGGGTAACCACGCGCAGGGCGTCGCGTTTTCTTCTGCGCGGTTAGGCGTGAAGGCCCTGATCGTTATGCCAACCGCCACCGCCGACATCAAAGTCGACGCGGTGCGCGGCTTCGGCGGCGAAGTGCTGCTCCAc                                                                                                                                                                                                                           >  1:700515/1‑135 (MQ=255)                                                                                                                                                                                         cGGGTAACCACGCGCAGGGCGTCGCGTTTTCTTCTGCGCGGTTAGGCGTGAAGGCCCTGATCGTTATGCCAACCGCCACCGCCGACATCAAAGTCGACGCGGTGCGCGGCTTCGGCGGCGAAGTGCTGCTCCACGGCGCGAACTTTGATGAAGCGAAAGCCAAAGCGATCGAACTGTCACAGCAGCAGGGGTTCACCTGGGTGCCGCCGTTCGACCATCCGATGGTGATTGCCGGGCAAGGCACGCTGGCGCTGGAACTGCTCCAGCAGGACGcc                                                                              <  1:294987/275‑1 (MQ=255)                                                                                                                                                                                            gTAACCACGCGCAGGGCGTCGCGTTTTCTTCTGCGCGGTTAGGCGTGAAGGCCCTGATCGTTATGCCAACCGCCACCGCCGACATCAAAGTCGACGCGGTGCGCGGCTTCGGCGGCGAAGTGCTGCTCCACGgcg                                                                                                                                                                                                                       <  2:700501/135‑1 (MQ=255)                                                                                                                                                                                                           gctttgattggcggcatcagttgtttgatcagcaccgccacgccagcagccagaccgccgCCGCCGACATCAAAGTCGAGGCGGTGCGCGGCTTCGGCGGCGAAGTGCTGCTCCACGGNGCGAACTTTGATGAAGCGAAAGCCAAAGCGATCGAACTGTCACAGCAGCAGGGGTTCACCTGGGTGCCGCCGTTCGACCCTCCGATGGTGATTGCCGGGCAAGGCACGCTGGCGCTGGAACTGCTCCAGCAGGACGCCCATCTCGACCGCGt                                                                >  1:610506‑M1/61‑271 (MQ=255)                                                                                                                                                                                                                gatttgcggcatcagttgtttgatcagcaccgccacgccagcagccagaccgccgCCGCCGACATCAAAGTCGACGCGGTGCGCGGCt                                                                                                                                                                                                                                                  <  2:139387‑M1/33‑1 (MQ=255)                                                                                                                                                                                                                    tgcggcatcagttgtttgatcagcaccgccacgccagcagccagaccgccgCCGCCGACATCAAAGTCGACGCGGTGCGCGGCTTcgg                                                                                                                                                                                                                                              >  1:139388‑M1/52‑88 (MQ=255)                                                                                                                                                                                                                                           aaGGCCCTGATCGTTATGCCAACCGCCACCGCCGACATCCAAGTCGCCGCGGTGCGCGGCTTCGGCGGCGAAGTGCTGCTCCACGGCGCGACCTTTGATGAAGCGAAAGCCAAAGCGATCGAACTGTCACAGCAGCAGGGGTTCACCTGGGTGCCGCCGTTCGACCATCCGATGGTGATTGCCGGGCAAGGCACGCTGGCGCTGGAACTGCTCCAGCAGGACGCCCATCTCGACCGCGTATTTGTGCCAGTCGGCTGCGGCGGTCTGGCTGCtgg                            >  1:152746/1‑275 (MQ=255)                                                                                                                                                                                                                                                               aaCCGCCACCGCCGACATCAAAGTCGACGCGGTGCGCGGCTTCGGCGGCGAAGTGCTGCTCCACGGCGCGAACTTTGATGAAGCGAAAGCCAAAGCGATCGAACTGTCACAGCAGCAGGGGTTCACCTGGGTGCCGCCGTTCGACCATCCGACGGTGATTGCCGGGCAAGGCACGCTGGCGCTGGAACTGCTCCAGCAGGACGCCCATCTAGACCGCGTATTTGTGCCCGTCGGCGGCGGCGGTCTGGCTGCGGGCGGGGCGGGGTTGATAAaac        >  1:646204/1‑275 (MQ=255)                                                                                                                                                                                                                                                                accgccaccgccGACATCAAAGTCGACTCGGTGCGCGGCTTCGGCGGCGCAGTGCTGCTCCACGGCGCGAACTTTTATGAAGCGAAAGCCAAAGCGa                                                                                                                                                                                         >  1:441311/1‑97 (MQ=255)                                                                                                                                                                                                                                                                accgccaccgacGACATCAAAGTCGACGCGGTGCGCGGCTTCGGCGGCGAAGTGCTGCTCCACGGCGCGAACTTTGATGAAGCGAAAGCCAAAGCGATCGAACTGTCACAGCAGCAGGGGTTCACCTGGGTGCCGCCGTTCGACCATCCGATGGTGATTGCCGGGCAAGGCACGCTGGCGCTGGAACTGCTCCAGCAGGACGCCCATCTCGACCGCGGATTTGTGCCAGTCGGCGGCGGAGGTCTGGCTGCTGGCGGGGCGGTGGTGAGCAaaca       >  1:722495/1‑275 (MQ=255)                                                                                                                                                                                                                                                                    ccaccgccGACAGCAAAGTCGACGCGGTGCGCGGCTGCGGCGGCGAAGTGCTGCTCCACGGCGCGAACTTTGATGAAGCGAAAGCCAAAGCGATCGa                                                                                                                                                                                     <  2:441304/97‑1 (MQ=255)                                                                                                                                                                                                                                                                     cacctccGACATCAAAGTCGACGCGGTGCGCGGCTTCGGCGGCGAAGTGCTGCTCCACGGCGCGAACTTTGATGAAGCGAAAGCCAAAGCGNTCGAACTGTCACAGCAGCAGGGGTTCACCTGGGTGCCGCCGTTCGACCATCCGATGGTGATTGCCGGGCAAGGCACGCTGGCGCTGGAACTGCTCCAGCAGGACGCCCATCTCGACCGCGTATTTGTGCCAGTCGGCGGCGGCGGTCTGGCTGCGGGCATGGCGGTGGTGATCAAACAACTGa  <  1:502438/275‑1 (MQ=255)                                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                                                 TACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTCTTGATAACGTCATTCTGGTGAAGCGCGAAGATCGCCAGCCAGTGCACAGCTTTAAGCTGCGCGGCGCATACGCCATGATGGCGGGCCTGACGGAAGAACAGAAAGCGCACGGCGTGATCACTGCTTCTGCGGGTAACCACGCGCAGGGCGTCGCGTTTTCTTCTGCGCGGTTAGGCGTGAAGGCCCTGATCGTTATGCCAACCGCCACCGCCGACATCAAAGTCGACGCGGTGCGCGGCTTCGGCGGCGAAGTGCTGCTCCACGGCGCGAACTTTGATGAAGCGAAAGCCAAAGCGATCGAACTGTCACAGCAGCAGGGGTTCACCTGGGTGCCGCCGTTCGACCATCCGATGGTGATTGCCGGGCAAGGCACGCTGGCGCTGGAACTGCTCCAGCAGGACGCCCATCTCGACCGCGTATTTGTGCCAGTCGGCGGCGGCGGTCTGGCTGCTGGCGTGGCGGTGCTGATCAAACAACTGA  >  CP009273/3948766‑3949300

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.