New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	4221838 =	66 (1.640)	4 (0.100)	3/296	NT	7.3%	coding (1324/1350 nt)	lysC	lysine‑sensitive aspartokinase 3
	?	CP009273	4222227 =	38 (0.990)					coding (935/1350 nt)	lysC	lysine‑sensitive aspartokinase 3

TCAGTGAGCCAGAGAGTTCAGTGTACGGGAATTCGTTTGCGAGCAGAACTGATAATATTCATTTTGCCTTCTCTTAACTATTTATCTCTTTCGATAATTAATTAGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTCATTGCCAATCAACGCGACCAGCGCCAGACCTTCTTCCACCTCCACCCGACACAGTGCGGAAAGCTCCATCAGCAGAGATTGCGTCAGCAACGTATCGCCAGTGGAGGTTGAACCGGTGGTATCA  >  CP009273/4221570‑4222103                                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                                          tcccgggaatctacaccaccgatccacgcgtagtttccgcagcaaaacgaattgatgaaatcgcgtgtgccgaagcggcagagatggcaacttttggtgcaaaagtactgcatccggcaacgttgctacccgcagtacgcagcgatatcccggtctttgtcggctccagcaaagacccacgcgcaggtggtacgctggtgtgcaataaaactgaaaatccgccgctgttccgcgctctggcgcttcgtcgcaatcagactctgctcacTTTGca                                                                                                                                                                                                                                                                      >  1:180222‑M1/269‑274 (MQ=255)  cccgggaatctacaccaccgatccacccggagtttccgcagcaaaacgcattgatgaaatcgcgttggccgaggcggcagagatggcaacttttggtgcaaaagtgctgcatccagcaacgttgctacccgcagtacgcagcgctatcccggtctttgtcggctccagcaaagacccacgcgcaggtggtacgctggtgtgcaataaaactgaagatccgccgctgttccgcgctctggcgcttcgtcgcaatcagactctgctcacTTTGca                                                                                                                                                                                                                                                                      >  2:730809‑M1/268‑273 (MQ=255)                      tgtcagggACTTCGTTTTCGAGCAGAACTGATAATATTTATTTTGCCTTCTCTTAACTATTTATCTCTTTCGATAATTAATTAGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGcc                                                                                                                                                                                                                                                <  2:587627/270‑1 (MQ=255)                                ttCGTTTGCGAGCAGAACTGATAATATTCATTTTGCCTTCTCTTAACTATTTATCTCTTTCGATAATTAATTAGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAgg                                                                                                                                                                                                                                      >  1:189188/1‑275 (MQ=255)                                ttCGTTTGCGAGCAGAACTGATAATATTCATTTTGCCTTCTCTTAACAATTTATCTCTTTCGATAATTAATTAGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATAAGCATAGTGACAAGAAAATCAATACGGCCCGAAATATAGCTTGCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGca                                                                                                                                                                                                                                                                      >  1:703748/1‑243 (MQ=255)                                    tttGCTAGCAGAACTGATAATTTTCATTTTTCCTTCTTATAACTATTTATCTCTTTCGATAATTAATTAGAGATGCAGATAAAAAAATGAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGcaccac                                                                                                                                                                                                                                                                  <  2:703734/243‑1 (MQ=255)                                     tttcGAGCAGAACTGATAATATTCATTTTGCCTTCTCTTAACTATTTATCTCTTTCGATAATTAATTAGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGca                                                                                                                                                                                                                                 <  2:189186/272‑1 (MQ=255)                                              aacgcattgatgaaatcgcgtttgccgaagcggcaganatggcaacntttggtgcaaaagtactgcatccggcaacgttgctacccgcagtacgcagcgatatcccggtctttgtcggctccagcaaagacccacgcgcaggtggtacgctggtgtgcaataaaactgaaaatccgccgctgttccgcgctctggtgcttcgtcgcaatcagactctgctcacTTTGcac                                                                                                                                                                                                                                                                     >  1:487239‑M1/224‑230 (MQ=255)                                                         atTCATTTTGCCTTCTCTTAACTATTTATCTCTTTCGATAATTAATTAGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCCGAAATATAGCTTGCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGa                                                                                                                                                                                                                                     >  1:461683/1‑251 (MQ=255)                                                           taaaagaaacaaatctTAACTATTGATCTCTGTAGATAATTAATGAGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCCATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGcc                                                                                                                                                                                                            <  2:235614/261‑1 (MQ=255)                                                                       ctctTAACTATTTATCTCTTTCGATAATTAATTAGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGAATCTTCGCCGGGCACAAGGAAACACAGGTTATGGCTGGATGCGCCATAACAAAACAtc                                                                                                                                                                                               >  2:168001/1‑274 (MQ=255)                                                                         tttATCTATTTAGCTCTTTCGATAATTAATTAGAGATGC‑GATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGa                                                                                                                                                                                            <  2:176190/274‑1 (MQ=255)                                                                                 tttATCTCTTTCGATAATTAATTAGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCNATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGt                                                                                                                                                                                        >  1:617403/1‑272 (MQ=255)                                                                                  ttATCTCTTTCGATAATTAATTAGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATg                                                                                                                                                                                                                >  1:235616/1‑247 (MQ=255)                                                                                           tCGATAATTAATTAGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCAAAGGTTATGGCTGGATGCGCCATAACAAAACATGCGAATGCTTAAcatcttacc                                                                                                                                                                           >  2:523216/1‑267 (MQ=255)                                                                                             gATAATTAATTAGAGATGAAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTAGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTa                                                                                                                                                                         <  1:168003/275‑1 (MQ=255)                                                                                               taattaatTAGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGNACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCCTAACAAATCATGCGa                                                                                                                                                                                            <  1:523225/254‑1 (MQ=255)                                                                                                                         aaTTAAAGGCAATTATCCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCCGACATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAAcgccgc                                                                                                                                              <  1:387708/274‑1 (MQ=255)                                                                                                                           taaaagtcaagacttCTCCTATAAAAACGCTGGTTAACAGAGTACAGACTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGTCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTGCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAGCGGTTCCAGTACGCCGAATACCTCTTTGCCAACGGCGCAgg                                                                                                                                           <  2:617390/262‑1 (MQ=255)                                                                                                                                               aTAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCt                                                                                                                                                                                                                                                                >  1:462011/1‑138 (MQ=255)                                                                                                                                                   aGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTc                                                                                                                                                                                                                                                            <  2:462004/138‑1 (MQ=255)                                                                                                                                                       gCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATCTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTCATTGCCAATCAAcg                                                                                                                >  1:120339/1‑274 (MQ=255)                                                                                                                                                         gtctttgtcggctccagcaaagacccacgcgcaggtggtacgctggtgtgcaataaaactgaaaatccgccgctgttccgcgctctggcgcttcgtcgcactcagactctgctcactt                                                                                                                                                                                                                                                                          <  2:415172‑M1/2‑1 (MQ=255)                                                                                                                                                             ttgtcggctccagcaaagacccacgcgcaggtggtacgctggtgtgcaataaaactgaaaatccgccgctgttccgcgctctggcgcttcgtcgcaatcagactctgctcacTTTGca                                                                                                                                                                                                                                                                      >  1:415179‑M1/113‑118 (MQ=255)                                                                                                                                                              tgtcggctccagcaaagacccacgcgcaggtggtacgctggtgtgcaataaaactgaaaatccgccgctgttccgcgctctggcgcttcgtcgcaatcagactctgctcactt                                                                                                                                                                                                                                                                          <  2:151321‑M1/2‑1 (MQ=255)                                                                                                                                                                  ggctccagcaaagacccacgcgcaggtggtacgctggtgtgcaataaaactgaaaatccgccgctgttccgcgctctggcgcttcgtcgcaatcagactctgctcacTTTGca                                                                                                                                                                                                                                                                      >  1:151322‑M1/108‑113 (MQ=255)                                                                                                                                                                              gacccacgcgcaggtggtacgctggtgtgcaataaaactgaaaatccgccgctgttccgcgctctggcgcttcgtcgcaatcagactctgctcactt                                                                                                                                                                                                                                                                          <  1:277047‑M1/2‑1 (MQ=255)                                                                                                                                                                               tttATTGATGAGCATAGTGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCCGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTCATTGCAAATCAACGCGACCAGCGCCAGACCCTCTtccac                                                                                       >  1:270174/1‑275 (MQ=255)                                                                                                                                                                               tttATTGATGAGCATAGTGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCCCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCAAACGCCACATGCATTTGACAGGCCACTGCCAACACACGAGACCCCCGCCatnacctctaccc                                                                                        >  2:69886/1‑262 (MQ=255)                                                                                                                                                                               acccacgcgcaggtggtacgctggtgtgcaataaaactgaaaatccgccgctgttccgcgctctggcgcttcgtcgcaatcagaccctgctcactt                                                                                                                                                                                                                                                                          <  2:509894‑M1/2‑1 (MQ=255)                                                                                                                                                                                  cacgcgcaggtggtacgctggtgtgcaataaaactgaaaatccgccgctgttccgcgctctggcgcttcgtcgcaatcagactctgctcacTTTGca                                                                                                                                                                                                                                                                      >  2:277043‑M1/92‑97 (MQ=255)                                                                                                                                                                                  aTTGAGGAGCATAGTGACAAGAAAATCAATACGGCCCTAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTNTTTGCACCACCGGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTCATTGCCAATCAAGGCGACCAGCGCCAGACCTTCTtccacct                                                                                     <  1:548414/274‑1 (MQ=255)                                                                                                                                                                                   acgcgcaggtggtacgctggtgtgcaataaaactgaaaatccgccgctgttccgcgctctggcgcttcgtcgcaatcagaccctgctcacTTTGca                                                                                                                                                                                                                                                                      >  1:509903‑M1/91‑96 (MQ=255)                                                                                                                                                                                    cgcgcaggtggtacgctggtgtgcaataaaactgaaaatccgccgctgttccgcgctctggcgcttcgtcgcaatcagactctgctcactt                                                                                                                                                                                                                                                                          <  1:555732‑M1/2‑1 (MQ=255)                                                                                                                                                                                        caggtggtacgctggtgtgcaataaaactgaaaatccgccgctgttccgcgctctggcgcttcgtcgcaatcagactctgctcacTTTGca                                                                                                                                                                                                                                                                      >  2:555720‑M1/86‑91 (MQ=255)                                                                                                                                                                                           gtggtacgctggtgtgcaataaaactgaaaatccgccgctgttccgcgctctggcgcttcgtcgcaatcagactctgctcactt                                                                                                                                                                                                                                                                          <  2:496048‑M1/2‑1 (MQ=255)                                                                                                                                                                                           gtggtacgctggtgtgcaataaaactgaaaatccgccgctgttccgcgctctggcgcttcgtcgcaatcagactctgctcacTTTGCACCACCTGCTCGGCATCTTCGCCGGGc                                                                                                                                                                                                                                            <  1:419691‑M1/32‑1 (MQ=255)                                                                                                                                                                                           cATAGTGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGa                                                                                                                                                                                                                                     >  1:431092/1‑121 (MQ=255)                                                                                                                                                                                               tacgctggtgtgcaataaaactgaaaatccgccgctgttccgcgctctggcgcttcgtcgcaatcagactctgctcacTTTGcac                                                                                                                                                                                                                                                                     <  1:667831‑M1/7‑1 (MQ=255)                                                                                                                                                                                               tacgctggtgtgcaataaaactgaaaatccgccgctgttccgcgctctggcgcttcgtcgcaatcagactctgctcacTTTGca                                                                                                                                                                                                                                                                      >  1:496057‑M1/79‑84 (MQ=255)                                                                                                                                                                                               tacgctggtgtgcaataaaactgaaaatccgccgctgtcccgcgctctggcgcttcgtcgcaatcagactctgctcacTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCa                                                                                                                                                                                                                                        >  2:419684‑M1/79‑114 (MQ=255)                                                                                                                                                                                               gTGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAAGAAGca                                                                                                                                                                                                                                 <  2:431085/121‑1 (MQ=255)                                                                                                                                                                                                tGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGa                                                                                                                                                                                                                                     >  1:736433/1‑116 (MQ=255)                                                                                                                                                                                                    aaGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGca                                                                                                                                                                                                                                 <  2:736419/116‑1 (MQ=255)                                                                                                                                                                                                     aGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGACGGGCACCAGGa                                                                                                                                                                                                                                     >  2:498987/1‑111 (MQ=255)                                                                                                                                                                                                      gAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTCATTGCCAATCAACGCGACCAGCGCCAGACCTTCTtccacct                                                                                     <  1:220064/254‑1 (MQ=255)                                                                                                                                                                                                         tgcaataaaactgaaaatccgccgctgttccgcgctctggcgcttcgtcgcaatcagactctgctcactt                                                                                                                                                                                                                                                                          <  2:119906‑M1/2‑1 (MQ=255)                                                                                                                                                                                                         aaTCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCGCGGAATGTTCGCCGGGCACCAGGAAGca                                                                                                                                                                                                                                 <  1:498996/111‑1 (MQ=255)                                                                                                                                                                                                             ataaaactgaaaatccgccgctgttccgcgctctggcgcttcgtcgcaatcagactctgctcacTTTGca                                                                                                                                                                                                                                                                      >  1:119907‑M1/65‑70 (MQ=255)                                                                                                                                                                                                                 aactgaaaatccgccgctgttccgcgctctggcgcttcgtcgcaatcagactctgctcacTTTGCACCACCTGCTCGGCATCTTCGCCGGGc                                                                                                                                                                                                                                            <  2:380580‑M1/32‑1 (MQ=255)                                                                                                                                                                                                                   gCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGa                                                                                                                                                                                                                                     >  2:208245/1‑97 (MQ=255)                                                                                                                                                                                                                     gaaaatccgccgctgttccgcgctctggcgcttcgtcgcaatcagactctgctcacTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCa                                                                                                                                                                                                                                        >  1:380587‑M1/57‑92 (MQ=255)                                                                                                                                                                                                                     ccGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACATGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCTAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGt                                                                                                                               <  1:181036/197‑1 (MQ=255)                                                                                                                                                                                                                       gAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGca                                                                                                                                                                                                                                 <  1:208247/97‑1 (MQ=255)                                                                                                                                                                                                                              aGCTGCGAGGCCATATATTATTTACTCAAATAAATGACTATGCAGGTGTTGCACCACCTGCTCGTCATCTTGGCCGGCCACCAGGAAGCACAGTTTATGGCTGGATGCGCCATAACAAATGATGCGAATGTTAAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTCATTGCCAATCAACGCGACCAGCGCCAGACCTTCTTCCACCTCCGCCCGACACAGTGCGGAAAGCTCCATCAGCAGAGATTGAGt                                          <  1:713405/273‑1 (MQ=255)                                                                                                                                                                                                                                gctgttccgcgctctggcgcttcgtcgcaatcagactctgctcactt                                                                                                                                                                                                                                                                          <  2:289037‑M1/2‑1 (MQ=255)                                                                                                                                                                                                                                cTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTCATTGCCAATCAACGCGACCAGCGCCAGACCTTCTTCCACCTCCCCCCGACACAGTGCGGAAAGCTCCATCAGCAGAGATAGCGTCAGc                                      >  1:171458/1‑275 (MQ=255)                                                                                                                                                                                                                                 ttCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACCCCGCAGGCTTTTGACAGGTCATTGCCAATCAACGCGACCAGCGCCAGACCTTCTTCCACCTCCACCCGACACAGTGCGGCAAGCTCCATCAGCAGAGATTGCGTCAGCa                                     >  1:422297/1‑275 (MQ=255)                                                                                                                                                                                                                                   ccAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCtt                                                                                                                                        >  1:174055/1‑174 (MQ=255)                                                                                                                                                                                                                                   ccAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTCATTGCCAATCAACGCGACCATCTCCAGACCTTCTTCCACCTCCACCCCACACAGTGCGCAACGCCCCATCCCCAGAGATTGccccctccac                                   >  2:698301/1‑266 (MQ=255)                                                                                                                                                                                                                                   ccAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTCATTGCCAATCAACGCGACCAGCGCCAGACCTTCTTCCACATCCACCCGACACAATGCGGAAAGCAACATCAGCAGAAATTGCGCCaacaac                                   >  1:56507/1‑275 (MQ=255)                                                                                                                                                                                                                                    ttccgcgctctggcgcttcgtcgcaatcagactctgctcacTTTGca                                                                                                                                                                                                                                                                      >  1:289042‑M1/42‑47 (MQ=255)                                                                                                                                                                                                                                     acgctataaatntttttCTCAAACAAATTACTGTGCAGTTTTTGCACCCCCTGCTGGGCATCTTCGCCGGGCACCAGGAAGCCAAGGTTATGTCTGGATGCGCCATAACAAATCCTGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGGCATTGCCAATCAACGCGACCAGCGTCAGCCCTTCTTCCACCTCCTCCCGACCCAGTGTGGTAAGCTCCATCAGCAGTGATTTCGTCAGCAACGt                                 <  2:56506/262‑1 (MQ=255)                                                                                                                                                                                                                                       gCCATACAGTATTTACTCATACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGa                                                                                                                                    <  2:174053/174‑1 (MQ=255)                                                                                                                                                                                                                                          aTACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCAcc                                                                                                                                                                                                                                         >  2:717994/1‑70 (MQ=255)                                                                                                                                                                                                                                           tACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTc                                                                                                                                                                              >  1:547351/1‑128 (MQ=255)                                                                                                                                                                                                                                              gttctctACTCAAACAAATTCCTATGCAGTTTTTGCCCCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGAACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTGGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTCATTGCCAATCAACGCGACCAGCGCCAGACCTTCTTCCACCTCCACCCGACACAGTGCGGAAAGCTCCATCAGCAGAGATTGCGTCAGCAACGTATCGCCAGt                        <  2:120338/269‑1 (MQ=255)                                                                                                                                                                                                                                              atctaggtacagaacaaaTTACTATACAGTTTTTTCACCACCTGCTCGGCATCTTCGGCTGGCACCAGGAAGCACAGGTTATGGCTGTATGAGACATAACAAATCATGCGAATGTTCAACGGTTCCAGTACGCCGAATACCTCTTTGCCTACGCCGCAGGCTTGTCACAGGTCATTGCCAATCAACGCGACCAGGGCCGGTCTTTCTTCCACCTCCACCCGACACAGGGCGTAAAGCTCCATCAGCTGAGATTGCGTCAGCAACGTATCGCCAGt                        <  2:197534/263‑1 (MQ=255)                                                                                                                                                                                                                                              aGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGa                                                                                                                                                                                                                                     <  1:718008/70‑1 (MQ=255)                                                                                                                                                                                                                                               gTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGt                                                                                                                                                                          <  2:547340/128‑1 (MQ=255)                                                                                                                                                                                                                                                tATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGt                                                                                                                               >  1:45631/1‑170 (MQ=255)                                                                                                                                                                                                                                                tATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTCATTGCCAATCAACGCGACCAGCGCCAGACCTTCTTCCACCTCCACCCGACACAGTGCGGAAAGCTCCATCAGCAGAGATTGCGTCAGc                                      <  2:330552/259‑1 (MQ=255)                                                                                                                                                                                                                                                tATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTCATTGCCAATCAACGCGACCAGCGCCAGACCTTCTTCCACCTCCACCCGACACAGTGCGGAAAGCTCCATCAGCAGAGATTGCGTCAGc                                      >  1:330558/1‑259 (MQ=255)                                                                                                                                                                                                                                                  tttACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAAcg                                                                                                                                                  >  2:269820/1‑149 (MQ=255)                                                                                                                                                                                                                                                  tttACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGATGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTCATTGCCAATCAACGCGACCAGCGCCAGACCTTCTTCCACCTACACCCGACACAGTTCGTAACGCTCCCTCAGCAGCGATTGCGTCAGCAACGTATCGcccgaggcg                    >  1:337093/1‑268 (MQ=255)                                                                                                                                                                                                                                                  tttACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATATTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGACAACGCCGAAGGCTTTTGACAGGTCATTGCCAATCAACGCGACCAGCGCCATACCTTCTTCCACCTCCACCCGACACAGTACCGAAAGCTCCAACCACCGAAAATGCCTCAGCAACGTACCCCCAgagagg                    >  1:714646/1‑270 (MQ=255)                                                                                                                                                                                                                                                    tACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTCAtt                                                                                                                           <  2:45630/170‑1 (MQ=255)                                                                                                                                                                                                                                                     aCTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACCGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTCATTGCCAATCAACGCGACCAGCACCAGCCCTCCTTCCACCCCCACCCGACACAGCGCGGAAAGCTCAAACAGCAACGCTTGCGTCAGCAACGTAGCCCCCGAGGAGttt                 >  2:633851/1‑275 (MQ=255)                                                                                                                                                                                                                                                     aCTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCa                                                                                                                                             >  2:439430/1‑151 (MQ=255)                                                                                                                                                                                                                                                      cTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAAcgccgc                                                                                                                                              <  1:269824/149‑1 (MQ=255)                                                                                                                                                                                                                                                      cTCAAACAAATTACTATGCAGTTTTTGCACCACCGTCTCGGCATCTTCGTCGGGCATCAGGAAGCACAGGTTATGGATGGAGGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTCATTGCCAATCAACGCGACCAGCGCCAGACCTTCTTCCACCTCCACCCGacac                                                                          <  2:620473/217‑1 (MQ=255)                                                                                                                                                                                                                                                         aaacaaaTTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCt                                                                                                                                         <  1:439437/151‑1 (MQ=255)                                                                                                                                                                                                                                                          aacaaaTTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCAc                                                                                                                                                                                                                                          >  2:570958/1‑53 (MQ=255)                                                                                                                                                                                                                                                          aacaaaTTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGCCAGGGCATTGCCAATCAACGCGACCACCGCCAGACCTTCTTCCACCTCCACCCGACACAGAGCGGAAAGCCCCATCAGCAGAGATTGCGTCCCCAACGAATCACCaacagaggcgtac              >  2:654389/1‑261 (MQ=255)                                                                                                                                                                                                                                                          aacaaaTTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTCATTGCCAATCAACGCGACCAGCGCCAGACctt                                                                                              >  2:388427/1‑193 (MQ=255)                                                                                                                                                                                                                                                          aacaaaTTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTCATTGCCAATCAACGCGACCAGCGCCAGACCTTCTTCCACCTCCACCCGACACAGTGCGGAAAGCTCCATCAGCAGAGAATGCGTCAGCa                                     >  1:421992/1‑250 (MQ=255)                                                                                                                                                                                                                                                              aaTTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAgg                                                                                                                                                                                                                                      <  1:570971/53‑1 (MQ=255)                                                                                                                                                                                                                                                              aaTTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTCATTGCCAATCAACGCGACCAGCGCCAGACCttcttc                                                                                          <  1:388434/193‑1 (MQ=255)                                                                                                                                                                                                                                                                    tATGCAGTTNTTGCCCCACCTGCTCGGCCTCTTCGCCGCGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCACGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTCATTGCCAATCAACGCGACCAGCGCCAGACCTTCTTCCACCTCCACCCGACACAGTGCGGAAAGCTCCATCAGCAGAGATTGCGTCAGCAACGTATCGCCAGTGGAGGTTGAACCGGTGGTATCa  <  2:270170/275‑1 (MQ=255)                                                                                                                                                                                                                                                                     aTGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACCGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGACATTGCCACTCAACGCGACCAGCGCCAGACCTTCTTCCACCTCCACCCTACACAGTGCTGAAAGCTCCATCAGCAGAGATTGCGTCAGCAACGTATAGCCAGTGGAGGTTGAACCtgtctcttct  >  1:197536/1‑267 (MQ=255)                                                                                                                                                                                                                                                                           tttttGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGtt                                                                                                                                                                                                                           >  1:140902/1‑51 (MQ=255)                                                                                                                                                                                                                                                                           tttttGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTCATTg                                                                                                                          >  1:295213/1‑148 (MQ=255)                                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                                          TCAGTGAGCCAGAGAGTTCAGTGTACGGGAATTCGTTTGCGAGCAGAACTGATAATATTCATTTTGCCTTCTCTTAACTATTTATCTCTTTCGATAATTAATTAGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGCGAATGTTGAACGGTTCCAGTACGCCGAATACCTCTTTGCCAACGCCGCAGGCTTTTGACAGGTCATTGCCAATCAACGCGACCAGCGCCAGACCTTCTTCCACCTCCACCCGACACAGTGCGGAAAGCTCCATCAGCAGAGATTGCGTCAGCAACGTATCGCCAGTGGAGGTTGAACCGGTGGTATCA  >  CP009273/4221570‑4222103

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.