New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	4221838 =	66 (1.640)	4 (0.100)	3/296	NT	7.3%	coding (1324/1350 nt)	lysC	lysine‑sensitive aspartokinase 3
	?	CP009273	4222227 =	38 (0.990)					coding (935/1350 nt)	lysC	lysine‑sensitive aspartokinase 3

TCCACCCGACACAGTGCGGAAAGCTCCATCAGCAGAGATTGCGTCAGCAACGTATCGCCAGTGGAGGTTGAACCGGTGGTATCAAGGGTTAATGCCACGCTCACTTCTGACGTGGTGATTAAGTCTACCGAAATATTATGCCGCGCGAGGATGCCGAAAACTTCCGCGAGGAAACCGCGAGAATGCAGCATATTCAGGCTGTGCAAAGTGAGCAGAGTCTGATTGCGACGAAGCGCCAGAGCGCGGAACAGCGGCGGATTTTCAGTTTTATTGCACACCAGCGTACCACCTGCGCGTGGGTCTTTGCTGGAGCCGACAAAGACCGGGATATCGCTGCGTACTGCGGGTAGCAACGTTGCCGGATGCAGTACTTTTGCACCAAAAGTTGCCATCTCTGCCGCTTCGGCAAACGCGATTTCATCAATGCGTTTTGCTGCGGAAACTACGCGTGGATCGGTGGTGTAGATGCCCGGGA  >  CP009273/4222020‑4222494                                                                                                                                                                                                                |                                                                                                                                                                                                                                                                            tccaccCGACACAGTGCGGAAAGCTCCATCAGCAGAGAGTGCGTCAGCAACGTATCGCCAGTGGAGGTTGAACCGGTGGTATCAAGGGTTAATGCCACGCTCACTTCTGACGTGGTGATTAACTCTACCGAAATATTATGCCGCGCGAGGATGCCGAAAACGTCCGCGAGGAAACCGCGAGAATGCAGCATATTCAGGCTGTGCAAAGTGAGCAGAGTCTGATTGCGACGAAGCGCCAGAGCGCGGAACAGCGGCGGATTTTCAGTTTTATTGca                                                                                                                                                                                                          <  1:654403/275‑1 (MQ=255)               tGCGGAAAGCTCCATCAGCAGAGATTGCGTCAGCAACGTATCGCCAGTGGAGGTTGAACCGGTGGTATCAAGGGTTAATGCCACGCTCACTTCTGACGTGGTGATTAAGTCTACCGAAATATTATGCCGCGCGAGGATGCCGAAAACTTCCGCGAGGAAACCGCGAGAATGCAGCATATTCAGGCTGTGCAAAGTGAGCAGAGTCTGATTGCGACGAAGCGCCAGAGCGCGGAACAGCGGCGGATTTTCAGTTTTAt                                                                                                                                                                                                              >  1:114779/1‑257 (MQ=255)               tGCGGAAAGCTCCATCAGCAGAGATTGCGTCAGCAACGTATCGCCAGTGGAGGTTGAACCGGTGGTATCAACGGTTAATGCCACGCTCACTTCTGACGTGGTGATTAAGTCTACCGAAATATTATGCCGCGCGAGGATGCCGAAAACTTCAGCGAGGAAACCGCGAGAATGCAGCATATTCAGGCTGTGCAAAGTGAGCAGAGTCTGATTGCGAAGAAgc                                                                                                                                                                                                                                                   >  1:267401/1‑220 (MQ=255)                   gAAAGCTCCATCAGCAGAGATTGCGTCAGCAACGTATCGCCAGTGGAGGTTGAACCGGTGGTATCAAGGGTTAATGCCACGCTCACTTCTGACGTGGTGATTAAGTCTACCGAAATATTATGCCGCGCGAGGATGCCGAAAACTTCCGCGAGGAAACCGCGAGAATGCAGCATATTCAGGCTGTGCAAAGTGAGCAGAGTCTGATTGCGACGAAGCGCCAGAGCGCGGAACAGCGGCGGATTTTCAGTTTTATTGca                                                                                                                                                                                                          <  2:114778/257‑1 (MQ=255)                           cATCAGCAGAGATTGCGTCAGCAACGTATCGCCAGTGGAGGTTGAACCGGTGGTATCAAGGGTTAATGCCACGCTCACTTCTGACGTGGTGATTAAGTCTACCGAAATATTATGCCGCGCGAGGATGCCGAAAACTTCCGCGAGGAAACCGCGAGAATGCAGCATATTCAGGCTGTGCAAAGTGAGCAGAGTCTGATTGCGACTAAGCGCCAGAGCGCGGAACAGCGGCGGATGTTCAGTTTTATTGAACACCAGCGTACCACCTGCGCGTgggc                                                                                                                                                                                >  1:124867/1‑274 (MQ=255)                           cATCAGCAGAGATTGCGTCAGCAACGTATCGCCAGTGGAGGTTGAACCGGTGGTATCAAGGGTTAATGCCACGCTCACTTCTGACGTGGCGATTAAGTCTACCGAAATATTATGCCGCGCGAGGATGCCGAAAACTTCCGCGAGGAAACCGCGAGAATGCAGCATATTCAGGCTGTGCAAAGTGAGCAGAGTCTGATTGCGACGAAGCGCCAGAGCGCGGAACAGCGGCGGATTTTCAGTTTTATTGca                                                                                                                                                                                                          >  2:45435/1‑249 (MQ=255)                              cagcagAGAGTGCGTTAGCTACGTATCGTCAGTGGAGTTTGAACCGGTGGTATCAAGGGTTAATGCCACGCTCACTGCTGACGTGGTGATTAAGTCTACCGAAATATTATGCCGCGCGAGGATGCCGAAAACTTCCGCGAGGAAACCGCGAGAATGCAGCATATTCAGGCTGTGCAAAGTGAGCAGAGTCTGATTGCGACGAAGCGCCAGAGCGCGGAACAGCGGCGGATTTTCAGTTTTATTGCACACCAGCGTACCCCCTGCGCGTGGGt                                                                                                                                                                                <  1:200950/272‑1 (MQ=255)                               agcagAGATTGCGTCAGCAACGTATCGCCAGTGGAGGTTGAACCGGTGGTATCAAGGGTTAATGCCACGCTCACTTCTGACGTGGCGATTAAGTCTACCGAAATATTATGCCGCGCGAGGATGCCGAAAACTTCCGCGAGGAAACCGCGAGAATGCAGCATATTCAGGCTGTGCAAAGTGAGCAGAGTCTGATTGCGACGAAGCGCCAGAGCGCGGAACAGCGGCGGATTTTCAGTTTTATTGCACAcc                                                                                                                                                                                                      <  1:45436/249‑1 (MQ=255)                                              aGCAACGTATCGCCAGTGGAGGTTGAACCGGTGGTATCAAGGGTTAATGCCACGCTCACTTCTGACGTGGTGATTAAGTCTACCGAAATATTATGCCGCGCGAGGATGCCGAAAACTTCCGCGAGGAAACCGCGAGAATGCAGCATATTCAGGCTGTGCAAAGTGAGCa                                                                                                                                                                                                                                                                       >  2:548845/1‑169 (MQ=255)                                                  aCGTATCGCCAGTGGAGGTTGAACCGGTGGTATCAAGGGTTAATGCCACGCTCACTTCTGACGTGGTGATTAAGTCTACCGAAATATTATGCCGCGCGAGGATGCCGAAAACTTCCGCGAGGAAACCGCGAGAATGCAGCGTATTCAGGCTGTGCAAAGTGAGCAGAGt                                                                                                                                                                                                                                                                   <  1:548856/169‑1 (MQ=255)                                                             gTGGAGGTTGAACCGGTGGTATCAAGGGTTAATGCCACGCTCACTTCTGACGTGGTGATTAAGTCTACCGAAATATTATGCCGCGCGAGGATGCCGAAAACTTCCGCGAGGAAACCGCGAGAATGCAGCATATTCAGGCTGTGCAAAGTGAGCa                                                                                                                                                                                                                                                                       >  2:620036/1‑154 (MQ=255)                                                                 aGGTTGAACCGGTGGTATCAAGGGTTAATGCCACGCTCACTTCTGACGTGGTGATTAAGTCTACCGAAATATTATGCCGCGCGAGGATGCCGAAAACTTCCGCGAGGAAACCGCGAGAATGCAGCATATTCAGGCTGTGCAAAGTGAGCAGAGt                                                                                                                                                                                                                                                                   <  1:620049/154‑1 (MQ=255)                                                                        aCCGGTGGTATCAAGGGTTAATGCCACGCTCACTTCTGACGTGGTGATTAAGTCTACCGAAATATTATGCCGCGCGAGGATGCCGAAAACTTCCGCGAGGAAACCGCGAGAATGCAGCATATTCAGGCTGTGCAAAGTGAGCAGAGt                                                                                                                                                                                                                                                                   >  2:269134/1‑147 (MQ=255)                                                                            gtggtATCAAGGGTTAATGCCACGCTCACTTCTGACGTGGTGATTAAGTCTACCGAAATATTATGCCGCGCGAGGATGCCGAAAACTTCCGCGAGGAAACCGCGAGAATGCAGCATATTCAGGCTGTGCAAAGTGAGCAGAGTCTGa                                                                                                                                                                                                                                                               <  1:269138/147‑1 (MQ=255)                                                                                                  cGCTCACTTCTGACGTGGTGATTAAGTCTACCGAAATATTATGCCGCGCGAGGATGCCGAAAACTTCCGCGAGGAAACCGCGAGAATGCAGCATATTCAGGCTGTGCAAAGTGAGCAGAGTCTGATTGCGACGAAGCGCCAGAGCGCGGAACAGCGGCGGATTTTCAGTTATATTGCACACCANCGTACCACNTGCGCGTGGGTCTTTGCTGGAGCCGACAAAGACCGGGATATCGCTGCGTACTGCGGGTAGCAACGTTGCCGGATGCAGTACt                                                                                                         >  1:490020/1‑275 (MQ=255)                                                                                                                   gtgATTAAGTCTACCGAAATATTATGCCGCGCGAGGATGCCGAAAACTTCCGCGAGGAAACCGCGAGAATGCAGCATATTCAGGCTGTGCAAAGTGAGCAGAGTCTGATTGCGACGAAGCGcc                                                                                                                                                                                                                                                >  2:3314/1‑123 (MQ=255)                                                                                                                   gtgATTAAGTCTACCGAAATATTATGCCGCGCGAGGATGCCGAAAACTTCCGCGAGGAAACCGCGAGAATGCAGCATATTCAGGCTGTGCAAAGTGAGCAGAGTCTGATTGCGACGAAGCGCCAGAGCGCGGAACAGCGGCGGATTTTCAGTTTTAt                                                                                                                                                                                                              >  2:327309/1‑157 (MQ=255)                                                                                                                       ttAAGTCTACCGAAATATTATGCCGCGCGAGGATGCCGAAAACTTCCGCGAGGAAACCGCGAGAATGCAGCATATTCAGGCTGTGCAAAGTGAGCAGAGTCTGATTGCGACGAAGCGCCagag                                                                                                                                                                                                                                            <  1:3314/123‑1 (MQ=255)                                                                                                                       ttAAGTCTACCGAAATATTATGCCGCGCGAGGATGCCGAAAACTTCCGCGAGGAAACCGCGAGAATGCAGCATATTCAGGCTGTGCAAAGTGAGCAGAGTCTGATTGCGACGAAGCGCCAGAGCGCGGAACAGCGGCGGATTTTCAGTTTTATTGca                                                                                                                                                                                                          <  1:327315/157‑1 (MQ=255)                                                                                                                           gTCTACCGAAATATTATGCCGCGCGAGGATGCCGAAAACTTCCGCGAGGAAACCGCGAGAATGCAGCATATTCAGGCTGTGCAAAGTGAGCAGAGTCTGATTGCGACGAAGCGCCAGAGCGCGGAACAGCGGCGGATTTTCAGTTTTATTGca                                                                                                                                                                                                          >  2:106587/1‑153 (MQ=255)                                                                                                                              tACCGAAATATTATGCCGCGCGAGGATGCCGAAAACTTCCGCGAGGAAACCGCGAGAATGCAGCATATTCAGGCTGTGCAAAGTGAGCAGAGTCTGATTGCGACGAAgc                                                                                                                                                                                                                                                   >  2:487003/1‑109 (MQ=255)                                                                                                                               aCCGAAATATTATGCCGCGCGAGGATGCCGAAAACTTCCGCGAGGAAACCGCGAGAATGCAGCATATTCAGGCTGTGCAAAGTGAGCAGAGTCTGATTGCGACGAAGCGCCAGAGCGCGGAACAGCGGCGGATTTTCAGTTTTATTGCACAcc                                                                                                                                                                                                      <  1:106588/153‑1 (MQ=255)                                                                                                                                ccGAAATATTATGCCGCGCGAGGATGCCGAAAACTTCCGCGAGGAAACCGCGAGAATGCAGCATATTCAGGCTGTGCAAAGTGAGCa                                                                                                                                                                                                                                                                       >  2:299647/1‑87 (MQ=255)                                                                                                                                  gAAATATTATGCCGCGCGAGGATGACGAAAACTTCCGCGAGGAAACCGCGAGAATGCAGCATATTCAGGCTGTGCAAAGTGAGCAGAGTCTGATTGCGACGAAGCGCCa                                                                                                                                                                                                                                               <  1:487012/109‑1 (MQ=255)                                                                                                                                    aaTATTATGCCGCGCGAGGATGCCGAAAACTTCCGCGAGGAAACCGCGAGAATGCAGCATATTCAGGCTGTGCAAAGTGAGCAGAGt                                                                                                                                                                                                                                                                   <  1:299652/87‑1 (MQ=255)                                                                                                                                          atGCCGCGCGAGGATGCCGAAAACTTCCGCGAGGAAACCGCGAGAATGCAGCATATTCAGGCTGTGCAAAGTGAGCAGAGTCTGATTGCGACGAAGCGCCAGAGCGCGGAACAGCGGCGGATTTTCAGTTTTATTGca                                                                                                                                                                                                          >  1:272541/1‑138 (MQ=255)                                                                                                                                             ccGCGCGAGGATGCCGAAAACTTCCGCGAGGAAACCGCGAGAATGCAGCATATTCAGGCTGTGCAAAGTGAGCAGAGTCTGATTGCGACGAAGCGCCAGAGCGCGGAACAGCGGCGGATTTTCAGTTTTATTGCACACCAGCGTACCACCTGCGCGTGGGTCTTTGCTGGAGCCGACAACGACCGGGATATCGCTGCGTACTGCGGGTAGCACAGTTGCCGGATGCAGTACTTTTGCACCAAAAGTTGCCACCTCTGCCTCCGCGGCACAcgcta                                                              >  2:723499/1‑273 (MQ=255)                                                                                                                                              cgcgcgAGGATGCCGAAAACTTCCGCGAGGAAACCGCGAGAATGCAGCATATTCAGGCTGTGCAAAGTGAGCAGAGTCTGATTGCGACGAAGCGCCAGAGCGCGGAACAGCGGCGGATTTTCAGTTTTATTGCACAcc                                                                                                                                                                                                      <  2:272537/138‑1 (MQ=255)                                                                                                                                                cgcgAGGATGCCGAAAACTTCCGCGAGGAAACCGCGAGAATGCAGCATATTCAGGCTGTGCAAAGTGAGCa                                                                                                                                                                                                                                                                       >  1:388475/1‑71 (MQ=255)                                                                                                                                                cgcgAGGATGCCGAAAACTTCCGCGAGGAAACCGCGAGAATGCAGCATATTCAGGCTGTGCAAAGTGAGCa                                                                                                                                                                                                                                                                       >  1:381128/1‑71 (MQ=255)                                                                                                                                                cgcgAGGATGCCGAAAACTTCCGCGAGGAAACCGCGAGAATGCAGCATATTCAGGCTGTGCAAAGTGAGCAGAGTCTGATTGCGACGAAGCGCCAGAGCGCGGAACAGCGGCGGATTTTCAGTTTTATTGCACACCAGCGTACCACCTGCGCGTGGGTCTTTGCTGGAGCCGACAAAGACCGGGATATCGCTGCg                                                                                                                                           >  1:466534/1‑195 (MQ=255)                                                                                                                                                    aGGATGCCGAAAACTTCCGCGAGGAAACCGCGAGAATGCAGCATATTCAGGCTGTGCAAAGTGAGCAGAGt                                                                                                                                                                                                                                                                   <  2:381121/71‑1 (MQ=255)                                                                                                                                                    aGGATGCCGAAAACTTCCGCGAGGAAACCGCGAGAATGCAGCATATTCAGGCTGTGCAAAGTGAGCAGAGt                                                                                                                                                                                                                                                                   <  2:388468/71‑1 (MQ=255)                                                                                                                                                    aGGATGCCGAAAACTTCCGCGAGGAAACCGCGAGAATGCAGCATATTCAGGCTGTGCAAAGTGAGCAGAGTCTGATTGCGACGAAGCGCCAGAGCGCGGAACAGCGGCGGATTTTCAGTTTTATTGCACACCAGCGTACCACCTGCGCGTGGGTCTTTGCTGGAGCCGACAAAGACCGGGATATCGCTGCGTACt                                                                                                                                       <  2:466527/195‑1 (MQ=255)                                                                                                                                                          ccGAAAACTTCCGCGAGGAAACCGCGAGAATGCAGCATATTCAGGCTGTGCAAAGTGAGCAGAGTCTGATTGCGACGAAGCGCCAGAGCGCGGAACAGCGGCGGATTTTCAGTTTTATTGCACACCAGCGTACCACCTgcgc                                                                                                                                                                                      >  1:248775/1‑142 (MQ=255)                                                                                                                                                                 ctgccGCGAGGAAACCGCGAGAATGCAGCATATTCAGGCTGTGCAAAGTGAGCAGAGTCTGATTGCGACGAAGCGCCAGAGCGCGGAACANCGGCGGATTTTCAGTTTTATTGCACACCAGCGTACCACCTGCGCGTGGGTCTTTGCTGGAGCCGACAAAGACCGGGATATCGCTGCGTACTGCGGGTAGCAACGTTGCCGGATGCAGTACTTTTGCACCAAAAGTTGCCATCTCTGCCGCTTCGGCAAACGCGATTTCATCAATGCGTTTtgc                                           <  1:570394/271‑1 (MQ=255)                                                                                                                                                                            tggtgcccggcgaagatgccgagcaggtggtgcaaaGTGAGCAGAGTCTGATTGCGACGAAGCGCCAGAGCGCGGGACAGCGGCGGATTTTCAGTTTTATTGCACACCAGCGTa                                                                                                                                                                                                >  2:419684‑M2/37‑114 (MQ=255)                                                                                                                                                                            tggtgcccggcgaagatgccgagcaggtggtgcaaaGTGAGCAGAGTCTGATTGCGACGAAGCGCCAGAGCGCGGAACAGCGGCGGATTTTc                                                                                                                                                                                                                      >  1:380587‑M2/37‑92 (MQ=255)                                                                                                                                                                                gcccggcgaagatgccgagcaggtggtgcaaaGTGAGCAGAGTCTGATTGCGACGAAGCGCCAGAGCGCGGAACAGCGGCGGATTTTCAGtt                                                                                                                                                                                                                  <  2:380580‑M2/60‑1 (MQ=255)                                                                                                                                                                                gcccggcgaagatgccgagcaggtggtgcaaaGTGAGCAGAGTCTGATTGCGACGAAGCGCCAGAGCGCGGAACAGCGGCGGATTTTCAGTTTTATTGCACACCAGCGTaccac                                                                                                                                                                                            <  1:419691‑M2/82‑1 (MQ=255)                                                                                                                                                                                          cagcaTATTCAGGCTGTGCAAAGTGAGCAGAGTCTGATTGCGACGAAGCGCCAGAGCGCGGAACAGCGGCGGATTTTCAGTTTTATTGCACACCAGCGTACCACCTGCGCGTGGGCCTTTGCTGGAGCCGACAAAGACCGGGat                                                                                                                                                    >  1:434162/1‑144 (MQ=255)                                                                                                                                                                                              atatTCAGGCTGTGCAAAGTGAGCAGAGTCTGATTGCGACGAAGCGCCAGAGCGCGGAACAGCGGCGGATTTTCAGTTTTATTGCACACCAGCGTACCACCTGCGCGTGGGTCTTTGCTGGAGCCGACAAAGACCGGGATATCg                                                                                                                                                <  2:434155/144‑1 (MQ=255)                                                                                                                                                                                                     ggCTGTGCAAAGTGAGCAGAGTCTGATTGCGACGAAGCGCCAGAGCGCGGAACAGCGGCGGATTTTCAGTTTTATTGCACACCAg                                                                                                                                                                                                    >  2:667817/1‑85 (MQ=255)                                                                                                                                                                                                         gtgcaaaGTGAGCAGAGTCTGATTGCGACGAAGCGCCAGAGCGCGGAACAGCGGCGGATTTTCAGTTTTATTGCACACCAGCGTa                                                                                                                                                                                                <  1:667831‑M2/78‑1 (MQ=255)                                                                                                                                                                                                         gtgcaaaGTGAGCAGAGTCTGATTGCGACGAAGCACCAGAGCGCGGAACAGCGGCGGATTTTCAGTTTTATTGCACACCAGCGTACCACCTGCGCGTGGGTCTTTGCTGGAGCCGACAAAGACCGGGATATCGCTGCGTACTGCGGGTAGCAACGTTGCCGGATGCAGTACTTTTGCACCAAANGTTGCCATNTCTGCCGCTTCGGCAAACGCGATTTCATCAATGCGtt                                               >  1:487239‑M2/8‑230 (MQ=255)                                                                                                                                                                                                          tgcaaaGTGAGCAGGGTCTGATTGCGACGAAGCGCCAGAGCGCGGAACAGCGGCGGATTTTCAGTTTTATTGCACACCAGCGTACCACCTGCGCGt                                                                                                                                                                                    >  1:509903‑M2/7‑96 (MQ=255)                                                                                                                                                                                                          tgcaaaGTGAGCAGAGTCTGATTGCGACGAAGCGCCAGAGCGCGGaa                                                                                                                                                                                                                                     >  1:289042‑M2/7‑47 (MQ=255)                                                                                                                                                                                                          tgcaaaGTGAGCAGAGTCTGATTGCGACGAAGCGCCAGAGCGCGGAACAGCGGCGGATTTTCAGTTTTAt                                                                                                                                                                                                              >  1:119907‑M2/7‑70 (MQ=255)                                                                                                                                                                                                          tgcaaaGTGAGCAGAGTCTGATTGCGACGAAGCGCCAGAGCGCGGAACAGCGGCGGATTTTCAGTTTTATTGCACACCAGCGTa                                                                                                                                                                                                >  1:496057‑M2/7‑84 (MQ=255)                                                                                                                                                                                                          tgcaaaGTGAGCAGAGTCTGATTGCGACGAAGCGCCAGAGCGCGGAACAGCGGCGGATTTTCAGTTTTATTGCACACCAGCGTACCACCTg                                                                                                                                                                                         >  2:555720‑M2/7‑91 (MQ=255)                                                                                                                                                                                                          tgcaaaGTGAGCAGAGTCTGATTGCGACGAAGCGCCAGAGCGCGGAACAGCGGCGGATTTTCAGTTTTATTGCACACCAGCGTACCACCTGCGCGTg                                                                                                                                                                                   >  2:277043‑M2/7‑97 (MQ=255)                                                                                                                                                                                                          tgcaaaGTGAGCAGAGTCTGATTGCGACGAAGCGCCAGAGCGCGGAACAGCGGCGGATTTTCAGTTTTATTGCACACCAGCGTACCACCTGCGCGTGGGTCTTTGCTGGAGcc                                                                                                                                                                   >  1:151322‑M2/7‑113 (MQ=255)                                                                                                                                                                                                          tgcaaaGTGAGCAGAGTCTGATTGCGACGAAGCGCCAGAGCGCGGAACAGCGGCGGATTTTCAGTTTTATTGCACACCAGCGTACCACCTGCGCGTGGGTCTTTGCTGGAGCCGACaa                                                                                                                                                              >  1:415179‑M2/7‑118 (MQ=255)                                                                                                                                                                                                          tgcaaaGTGAGCAGAGTCTGATTGCGACGAAGCGCCAGAGCGCGGAACAGCGGCGGATTTTCAGTTTTATTGCACACCAGCGTACCACCTGCGCGTGGGTCTTTGCTGGAGCCGACAAAGACCGGGATATCGCTGCGTACTGCGGGTAGCAACGTTGCCGGATGCAGTACTTTTGCACCAAAAGTTGCCATCTCTGCCGCTTCGGCACACGCGATTTCATCAATTCGTTTTGCTGCGGAAACTACGCGTGGATCGGTGGTGTAGATTCCCGGGa  >  1:180222‑M2/7‑274 (MQ=255)                                                                                                                                                                                                          tgcaaaGTGAGCAGAGTCTGATTGCGACGAAGCGCCAGAGCGCGGAACAGCGGCGGATCTTCAGTTTTATTGCACACCAGCGTACCACCTGCGCGTGGGTCTTTGCTGGAGCCGACAAAGACCGGGATAGCGCTGCGTACTGCGGGTAGCAACGTTGCTGGATGCAGCACTTTTGCACCAAAAGTTGCCATCTCTGCCGCCTCGGCCAACGCGATTTCATCAATGCGTTTTGCTGCGGAAACTCCGGGTGGATCGGTGGTGTAGATTCCCggg   >  2:730809‑M2/7‑273 (MQ=255)                                                                                                                                                                                                              aaGTGAGCAGGGTCTGATTGCGACGAAGCGCCAGAGCGCGGAACAGCGGCGGATTTTCAGTTTTATTGCACACCAGCGTACCACCTGCGCGTGGGt                                                                                                                                                                                <  2:509894‑M2/94‑1 (MQ=255)                                                                                                                                                                                                              aaGTGAGCAGAGTCTGATTGCGACGAAGCGCCAGAGCGCGGAACAgc                                                                                                                                                                                                                                 <  2:289037‑M2/45‑1 (MQ=255)                                                                                                                                                                                                              aaGTGAGCAGAGTCTGATTGCGACGAAGCGCCAGAGCGCGGAACAGCGGCGGATTTTCAGTTTTATTGca                                                                                                                                                                                                          <  2:119906‑M2/68‑1 (MQ=255)                                                                                                                                                                                                              aaGTGAGCAGAGTCTGATTGCGACGAAGCGCCAGAGCGCGGAACAGCGGCGGATTTTCAGTTTTATTGCACACCAGCGTaccac                                                                                                                                                                                            <  2:496048‑M2/82‑1 (MQ=255)                                                                                                                                                                                                              aaGTGAGCAGAGTCTGATTGCGACGAAGCGCCAGAGCGCGGAACAGCGGCGGATTTTCAGTTTTATTGCACACCAGCGTACCACCTGcgcg                                                                                                                                                                                     <  1:555732‑M2/89‑1 (MQ=255)                                                                                                                                                                                                              aaGTGAGCAGAGTCTGATTGCGACGAAGCGCCAGAGCGCGGAACAGCGGCGGATTTTCAGTTTTATTGCACACCAGCGTACCACCTGCGCGTGGGTc                                                                                                                                                                               <  1:277047‑M2/95‑1 (MQ=255)                                                                                                                                                                                                              aaGTGAGCAGAGTCTGATTGCGACGAAGCGCCAGAGCGCGGAACAGCGGCGGATTTTCAGTTTTATTGCACACCAGCGTACCACCTGCGCGTGGGTCTTTGCTGGAGCCGACa                                                                                                                                                               <  2:151321‑M2/111‑1 (MQ=255)                                                                                                                                                                                                              aaGTGAGCAGAGTCTGAGTGCGACGAAGCGCCAGAGCGCGGAACAGCGGCGGATTTTCAGTTTTATTGCACACCAGCGTACCACCTGCGCGTGGGTCTTTGCTGGAGCCGACAAAGAc                                                                                                                                                          <  2:415172‑M2/116‑1 (MQ=255)                                                                                                                                                                                                                |                                                                                                                                                                                                                                                                            TCCACCCGACACAGTGCGGAAAGCTCCATCAGCAGAGATTGCGTCAGCAACGTATCGCCAGTGGAGGTTGAACCGGTGGTATCAAGGGTTAATGCCACGCTCACTTCTGACGTGGTGATTAAGTCTACCGAAATATTATGCCGCGCGAGGATGCCGAAAACTTCCGCGAGGAAACCGCGAGAATGCAGCATATTCAGGCTGTGCAAAGTGAGCAGAGTCTGATTGCGACGAAGCGCCAGAGCGCGGAACAGCGGCGGATTTTCAGTTTTATTGCACACCAGCGTACCACCTGCGCGTGGGTCTTTGCTGGAGCCGACAAAGACCGGGATATCGCTGCGTACTGCGGGTAGCAACGTTGCCGGATGCAGTACTTTTGCACCAAAAGTTGCCATCTCTGCCGCTTCGGCAAACGCGATTTCATCAATGCGTTTTGCTGCGGAAACTACGCGTGGATCGGTGGTGTAGATGCCCGGGA  >  CP009273/4222020‑4222494

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.