New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 4307297	53 (1.320)	4 (0.110)	4/292	NT	7.7%	coding (416/681 nt)	phnL	ribophosphonate triphosphate synthase subunit; putative ABC transporter ATP‑binding protein
	?	CP009273	= 4307349	46 (1.220)					coding (364/681 nt)	phnL	ribophosphonate triphosphate synthase subunit; putative ABC transporter ATP‑binding protein

AATCATGAAGAGGCTCCCATTGGGTGCAGGCGGTCGGCGACGTCATTACGTACAGCTTCGTCATGGAAGATGCCTACGATGGCTGCGCCACGGGTTTTGGCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCGCTGGCGCGGTGACCAGGTCTACCCACTCGTCACCGTGTTTGATCTGGATTTGACCTTCGTCGGGCAGATAGTTGGCGTACAGCGAGCGTAGCAGAG  >  CP009273/4307030‑4307567                                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                                               aaTCATGAAGAGGCTCCCATTGGGTGCAGGCGGTCGGCGACGTCATTACGTACAGCTTCGTCATGGAAGATGCCTACGATGGCTGCGCCACGGGTTTTGGCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGACGTTGACGCGCAGCTGTTCGCCACCGGAAAATGTCGAAGGTGCCAGGTGCCACAGGCGTGCCGGCACGtt                                                                                                                                                                                                                                                                         >  1:150234/1‑275 (MQ=255)               tCCCATTGGGTGCAGGCGGTCGGCGACGTCATTACGTACAGCTTCGTCATGGAAGATGCCTACGATGGCTGCGCCACGGGTTTTGGCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAANCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCAAGGTGCCACAGGCGTACCGGCACGTTCAggggggg                                                                                                                                                                                                                                                                >  1:629802/1‑269 (MQ=255)               tCCCATTGGGTGCAGGCGGTCGGCGACGTCATTACGTACAGCTTCGTCATGGAAGATGCCTACGATGGCTGCGCCACGGGTTTTGGCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATCAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGaaaa                                                                                                                                                                                                                                                           >  1:387739/1‑275 (MQ=255)                           cAGGCGGTCGGCGACGTCACTACGTACAGCTTCGTCATGGAAGATGCCTACGATGGCTGCGCCACGGGTTTTGGCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCCCGTTCAGGCGGGTGAGAAGAAGCGCGGCtt                                                                                                                                                                                                                                               >  1:605891/1‑275 (MQ=255)                                                   tacgtgttcgtcctGCTAGAGTCCTACGGTGGTTGCGCAGCGGGTTTGGGCTGCGAGACTCGGTTCCACCCCCGCGGCGCTGTTTTTGGCGTCCAGCGGGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCGGCTGGTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGcgg                                                                                                                                                                                                                         >  2:292446‑M2/7‑270 (MQ=255)                                                     cAGCTTCGTCATGGAAGATGCCTACGATGGCTGCGCCACGGGTTTTGTCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTGCAGGCGGGGGAGCAGACGCGCGGCTTTAGCGGAGCAGGCTTCCCGcggaac                                                                                                                                                                                                                      <  1:292451‑M2/274‑7 (MQ=255)                                                      aGCTTCGTCATGGAAGATGCCTACGATGGCTGCGCCACGGGTTTTGGCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGGAGGCTTCACGcggaacgc                                                                                                                                                                                                                    <  1:167482‑M2/275‑9 (MQ=255)                                                       gtttcgTCATGGAAGATGCCTACGAGTGCTTCGCCACGGGTTTTGGCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGcggaacgc                                                                                                                                                                                                                    >  1:260510‑M2/3‑266 (MQ=255)                                                       gCTTCGGCATGGAATATGCCTACGATGGCTGCGCCACGGGTTTTGGCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGAGAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGcggaacgc                                                                                                                                                                                                                    >  1:338474‑M2/1‑266 (MQ=255)                                                            gTCATGGAAGATGCCTACGATGGCTGCGCCACGGGTTTTGGCTTCGCGAATCAGTTCCACCACCAAGGCACTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGGCACAGGCGTTCCGGCACGt                                                                                                                                                                                                                                                                          <  1:584087/215‑1 (MQ=255)                                                             tCATGGAAGATGCCTACGATGGCTGCGCCACGGGTTTTGGCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAgg                                                                                                                                                                                                                                                                     <  1:241351/219‑1 (MQ=255)                                                             tCATGGAAGATGCCTACGATGGCTGCGCCACGGGTTTTGGCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAgg                                                                                                                                                                                                                                                                     >  2:241348/1‑219 (MQ=255)                                                                  gAAGATGCCTACGATGGCTGCGCCACGGGTTTCGGCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGAGAGCAGACGAGCGGCTTTAACGGCGCAGGATTCACGCGAACCGACGGTATCGagca                                                                                                                                                                                                        >  1:214966/1‑275 (MQ=255)                                                                   aaagagCCGACGATGGCGGCGGCCCGGGTTTTGGCGTGGCGAATCACTTCCGCCACCGCGGCGCTGTTTTTGGGGTCCAGCGAGGCGGTAGGTTCGTCGAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGGTGCCGCGCTGGTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCCCGTTCAGGCGGGTGAGAAGACGCGCCGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGagcag                                                                                                                                                                                                       <  2:167480/270‑1 (MQ=255)                                                                       tGCCTACGATGGCTGCGCCACGGGGTTTGGCTTCGCGAATCAGTTCCACCACCGCGCCGCTGTTTTTGGCGTCCAGCGAGGCGCGAGGTTCTTCAAGCCGCCGATTGGTGTACTCGACGCTAAAGCCGCTGGCGATGTTGACGCGCTGCTGTTCTCCACCGGTAAATCCCGCTGGTGCCAGCTGCCACTGGCGTTGCGGCGCGTCCCGTCGGTGGCGCAGACCGGCGGCTTTGGCGGCGCCGGCGTCCCGCAGAACGCCGGtccgggtcccgga                                                                                                                                                                                                    >  2:689284/1‑262 (MQ=255)                                                                          cTACGATGGCTGCGCCACGGGTTTTGGCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTc                                                                                                                                                                                                                                                                        >  1:309101/1‑203 (MQ=255)                                                                            aCGATGGCTTCGCCCCGGGTTTTGGCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGATGCGGTAGGTTCGTCANGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACTCGGAAGGACGGTATCGAGCAGCGGCTGCa                                                                                                                                                                                               <  1:517569/274‑1 (MQ=255)                                                                              gATGGCTGCGCCACGGGTTTTGGCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGc                                                                                                                                                                                                                                                                    <  2:309096/203‑1 (MQ=255)                                                                               atggttcggcaaCGGGTTTTGGCTTTGCGAATCAGTTCCACGACCGCGGTGCTGGTTTTGGCGGCCAGCGAGGCGGTAGGTGCGTCAAGCAGCAGAATGGGGCAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGGGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTGCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATca                                                                                                                                                                                            <  1:179157/263‑1 (MQ=255)                                                                                 ggCTGCGCCACGGGTTTTGGCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCgg                                                                                                                                                                                                                                                                               <  2:600390/189‑1 (MQ=255)                                                                                   cTGCGCCACGGGTTTTGGCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCCGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTACGGCACGTTCCAGCGGGTGAGAAGACGTCGGGCCTTAGGGGCGCAGGCTTGACCAGGACCGCCGGGTTGGAGCAGCGGccgnctgtctctc                                                                                                                                                                                       >  2:269517/1‑263 (MQ=255)                                                                                      cgcCACGGGTTTTGGCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGCGTGGGGTAGTCGACGCTACAGCCGCGGGCGATGTTGCCGCGCACCTGTTGGCCACCGGAACATGTCGCTGGTGCCAGGTGCCACCGGCGTTCCGGCCCGTTCACGCGGTTGACACGACGCGCGACTTTAGCGACGCCGGCGGCACCGGGAAAGGCGGGCCCGCGCCGGGGCTGCATCACCGCGTcc                                                                                                                                                                                    >  2:730913/1‑275 (MQ=255)                                                                                            gggTTTTGGCTTCGCGAATCAGTTCCACCACCGCAGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGTGTTCCGGCACGTNCAGGCGGGNGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGCACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCACGTGCt                                                                                                                                                                              >  1:482802/1‑275 (MQ=255)                                                                                                        cgcgAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGATCAGGCGGGTGANAAGACGCGNGGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCgg                                                                                                                                                                   >  1:486886/1‑274 (MQ=255)                                                                                                            aaTCAGTTCCACCACCGCGGCGCTGTTTTTTGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCCGGCGGGTGAGAAGAcgcgc                                                                                                                                                                                                                                                    <  1:607202/189‑1 (MQ=255)                                                                                                                           cgcgGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGGCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGACCGCCGGTAGCGAGAAGCGGCGGCAGCAGCACTGCCGGGGCTGCGATACGCGGGAGGAGGGGCAGAAACGGGc                                                                                                                                               >  2:202020/1‑275 (MQ=255)                                                                                                                            gcggcgCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCCCCACTTCCCGTGCTGCGATCCGCGGGATGCCGCGCCGCAACTGGcc                                                                                                                                              >  2:683488/1‑274 (MQ=255)                                                                                                                                 gcggTTTTTGGCGTCCAGCGGGTCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCAcc                                                                                                                                          <  1:202022/271‑1 (MQ=255)                                                                                                                                  cTGTTTTTGGTGTCCAGCGAGGCGGTAGGTTCGGCAAGCAGCAGATTGGGGTAGTCGATGATAACGCCGCGGGCGATGTTGGCGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACATGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCAccc                                                                                                                                         <  1:587290/274‑1 (MQ=255)                                                                                                                                             gTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGAcggcgg                                                                                                                             >  1:422826/1‑275 (MQ=255)                                                                                                                                               ccAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGc                                                                                                                                                                                                                                                                    >  1:285268/1‑138 (MQ=255)                                                                                                                                                 agcttggcggtaGGTTCGTCAAGCAGCGGAATCGAGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTGGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGcgg                                                                                                                                                                                                                         >  1:645235‑M2/6‑176 (MQ=255)                                                                                                                                                   cGAGGCGGTAGGGTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGt                                                                                                                                                                                                                                                                <  2:285263/138‑1 (MQ=255)                                                                                                                                                                tCGTCAAGCAGCAGAATGGGGTAGTCGAGCATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCNGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTAACCCAGCCGACGGTGGTTTTGCGGAATTcaacaa                                                                                                           >  1:524535/1‑272 (MQ=255)                                                                                                                                                                           cagAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCa                                                                                                                                                                                                                                                                       >  2:353945/1‑107 (MQ=255)                                                                                                                                                                               aTGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCg                                                                                                                                                                                                                                                                   <  1:353951/107‑1 (MQ=255)                                                                                                                                                                                tGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGc                                                                                                                                                                                                   >  2:40893/1‑170 (MQ=255)                                                                                                                                                                                    gTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCa                                                                                                                                                                                               <  1:40894/170‑1 (MQ=255)                                                                                                                                                                                      aGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCNGCTTTAGCGGTACAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCGCTGGCGCGGTGAc                                                                                     <  1:683502/274‑1 (MQ=255)                                                                                                                                                                                       ggggacgaAAAGGCCGCGGGCGCGGTTGGCGCGCGGCTGTTCGCCACGGGTAAATGTCGTGGGTGCCAGGTGCCACAGGCGTGCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTGGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCGCTGGCGCGGTGAc                                                                                     <  2:605878/270‑1 (MQ=255)                                                                                                                                                                                       gTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAAGGTCGATGGTGCCAGGTGCCACATGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCGCTGGCGCGGTGAc                                                                                     <  1:727252/273‑1 (MQ=255)                                                                                                                                                                                        tCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGc                                                                                                                                                                               >  1:152176/1‑182 (MQ=255)                                                                                                                                                                                          ggcgaTAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGAGCGGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGGGGTGTTGCGGATTTACACCACTGTGCGCGCTGGCGCGGTGAACAgg                                                                                 >  1:6376/3‑274 (MQ=255)                                                                                                                                                                                          gacgaTAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGagaag                                                                                                                                                                                                                                                          >  1:709396/1‑105 (MQ=255)                                                                                                                                                                                            cgaTAAAGCGGCGGGCGATGTGGACGCGCTGGTGTTCGACAACGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGGTCCGGGACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGTGCAGGCTTCACGCGGAACGCCGGTATCGGGCAGCGGCTGCATCACCACGTCCAGTGCTgag                                                                                                                                                                           <  2:152175/182‑1 (MQ=255)                                                                                                                                                                                            cgaTAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCAc                                                                                                                                                                                                                             >  1:190989/1‑132 (MQ=255)                                                                                                                                                                                              aTAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGAcgc                                                                                                                                                                                                                                                      <  2:709382/105‑1 (MQ=255)                                                                                                                                                                                                aaaGCCGCGGGAGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGcgg                                                                                                                                                                                                                         >  2:190987‑M2/1‑129 (MQ=255)                                                                                                                                                                                                 acgCCGCGGGCGAGGTTGACGCGCTGCTGTGCGCCACCGGAAAATGTCGATGGGGCCAGGTGCCACAGGCGTTACGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCGCTGGCGCGGTGACCAGGTCTAccc                                                                          <  1:50313/272‑1 (MQ=255)                                                                                                                                                                                                  aGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCCCCGGAAAATGTCGATTGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCCGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCCGCATCCCCCCTTCCAGTCCTGAGATCCTCGGCCTGCCGCTCAGCAACCGGCCCACCCACCCGACGGTAGTTGTTCGGCTTTCCCCCACTTTGCGCCCCGGCGCCGTAGCCACGTCTccccc                                                                         >  2:50312/1‑273 (MQ=255)                                                                                                                                                                                                                     gcgtggcgtgtagCCACAGGAAACGGTCGATGGTGACAGGTGCTACAGGAGTTCCGGCGCGTTCAGGCGGGGGGGAAGTCGCGCGGCTTTAGCGGCGCAGGCTTCGCGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCGCTGGCGCGGTGACCAGGTCTACCCACTCGTCACCGTGTTTGATc                                                      <  2:214964/262‑1 (MQ=255)                                                                                                                                                                                                                        ctgctgTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCGCTGGcgcg                                                                                          >  1:623925/1‑235 (MQ=255)                                                                                                                                                                                                                            tgTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCGCTGGCGCGGTGa                                                                                      <  2:623911/235‑1 (MQ=255)                                                                                                                                                                                                                                 gCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATcacca                                                                                                                                                                                         >  2:505877/1‑131 (MQ=255)                                                                                                                                                                                                                                  ccACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGcgtgaagcctgcgccgctaaagccgcgcgtcttc                                                                                                                                                                                                                                              >  2:387214‑M1/1‑43 (MQ=255)                                                                                                                                                                                                                                     ccGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGcgtgaagcctgcgccgctaaagccgcgcgtcttctca                                                                                                                                                                                                                                           >  2:465747‑M1/1‑40 (MQ=255)                                                                                                                                                                                                                                     ccGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCCAGCAGCGGCTGCATCACCACTTc                                                                                                                                                                                     <  1:505886/131‑1 (MQ=255)                                                                                                                                                                                                                                      cGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGcgtgaagcctgcgccgctaaagccgcgcgtcttctcac                                                                                                                                                                                                                                          <  1:387221‑M1/77‑39 (MQ=255)                                                                                                                                                                                                                                      cGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAgc                                                                                                                                                                                                                                           >  2:640637/1‑76 (MQ=255)                                                                                                                                                                                                                                         aaaaTGTCGATGGTGCCAGGTGCCACAGGCGTTCCGcgtgaagcctgcgccgctaaagccgcgcgtcttctcacccg                                                                                                                                                                                                                                       <  1:465754‑M1/77‑42 (MQ=255)                                                                                                                                                                                                                                          aaaTGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAgcggcg                                                                                                                                                                                                                                       <  1:640651/76‑1 (MQ=255)                                                                                                                                                                                                                                             tGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCAc                                                                                                                                                                                                                             >  2:103943/1‑83 (MQ=255)                                                                                                                                                                                                                                             tGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCGCTGGCGCGGGGACCAGGTCTACCCACTCGTCACCGGGTTTGATCTGGATTTGACCTTCGTCGGGCAGAt                             >  1:593195/1‑275 (MQ=255)                                                                                                                                                                                                                                                 gATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGcgg                                                                                                                                                                                                                         >  1:103944‑M2/1‑80 (MQ=255)                                                                                                                                                                                                                                                         caggtgccaCAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCNGCGGCTGCATCACCACTTCTAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCGCTGGCGCGGTGACCAGGTCTACCCACTCGTCACCGTGTTTGATCTGGATTTGACCTTCGTCGGGCAGATAGTTGGCGTACa                 <  1:564665/275‑1 (MQ=255)                                                                                                                                                                                                                                                         caggggccaCGGGCGGTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGAACGTCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGAGACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCGCTGGCGCGGTGACCAGGTCTACCCACTCGTCACCGTGTTTGATCTGGATTTGACCTTCGTCGGGCAGATAGTTGGCGTACa                 <  1:689298/275‑1 (MQ=255)                                                                                                                                                                                                                                                                     gCGTTCCGcgtgaagcctgcgccgctaaagccgcgcgtcttctcacccgcctgaacgtgccggaacgcctgtggcacctggcaccatcgacattttccggtggcgaacagcagcgcgtcaacatcgcccgcggctttctcgtcgactaccccattctgctgcttgacgaacctaccgcctcgctggacgccaaaaacagcgccgcggtggtggaactgattcgcgaagccaaaacccgtggcgcagccatcgtaggcatattccatgccgaagc      >  1:338474‑M1/1‑8 (MQ=255)                                                                                                                                                                                                                                                                     gCGTTCCGcgtgaagcctgcgccgctaaagccgcgcgtcttctcacccgcctgaacgtgccggaacgcctgtggcacctggcaccatcgacattttccggtggcgaacagcagcgcgtcaacatcgcccgcggctttatcgtcgactaccccattctgctgcttgacgaacctaccgcctcgctggacgccaaaaacagcgccgcggtggtggaactgattcgcgaagccaaaacccgtggcgaagcactcgtaggcatcttccatgacgaaac      >  1:260510‑M1/1‑8 (MQ=255)                                                                                                                                                                                                                                                                     gCGTTCCGcgtgaagcctccgccgctaaagccgcgcgtcttctcacccgcctgaacgtgccggaacgcctgtggcacctggcaccatcgacattttccggtggcgaacagcagcgcgtcaacatcgcccgcggctttatcgtcgactaccccattctgctgcttgacgaacctaccgcctcgctggacgccaaaaacagcgccgcggtggtggaactgattcgcgaagccaaaacccgtggcgcagccatcgtaggcatcttccatgacgaagct     <  1:167482‑M1/275‑268 (MQ=255)                                                                                                                                                                                                                                                                       gTTCCGcgggaagcctgctccgctaaagccgcgcgtctgctcccccgcctgcacgtgccggaacgcctgtggcacctggcaccatcgacattttccggtggcgaacagcagcgcgtcaacatcgcccgcggctttatcgtcgactaccccattctgctgcttgacgaacctaccgcctcgctggacgccaaaaacagcgccgcggtggtggaactgattcgcgaagacaaaacccgtggcgcagccatcgtaggcatcttccatgacgaagctg    <  1:292451‑M1/274‑269 (MQ=255)                                                                                                                                                                                                                                                                         tCCGGCACGCTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCGCTGGCGCgg                                                                                         >  1:548704/1‑187 (MQ=255)                                                                                                                                                                                                                                                                          ccGcgtgaagcctgcgccgctaaagccgcgcgtcttctcacccgcctgaacgtgccggaacgcctgtggcacctggcaccatcgacattttccggtggcgaccagccgcgcgtcaacatcgcccgcggctttatcgtcgactaccccattctgctgcttgacgaacctaccgccccgctggacgccaaaaacagcgccgcgggggtggaaccgagtctcgcagcccaaacccgctgcgcaaccaccgtaggactctagcaggacgaacacgta  >  2:292446‑M1/1‑3 (MQ=255)                                                                                                                                                                                                                                                                          ccGcgtgaagcctgcgccgctaaagccgcgcgtcttctcacccgcctgaacgtgccggaacgcctgtggcacctggcaccatcgacattttccggtggcgaacagcagcgcgtcaacatctcccgcggcttt                                                                                                                                               >  2:190987‑M1/1‑3 (MQ=255)                                                                                                                                                                                                                                                                          ccGcgtgaagcctgcgccgctaaagccgcgcgtcttctcacccgcctgaacgtgccggaacgcctgtggcacctggcaccatcgacattttccggtggccaacagcagcgcgtcaacatcgcccgcggctttatcgtcgactactcgattccgctgcttgacgaacctaccgccaagct                                                                                                >  1:645235‑M1/1‑3 (MQ=255)                                                                                                                                                                                                                                                                          ccGcgtgaagcctgcgccgctaaagccgcgcgtcttctcacccgcctgaacgtgccggaacgcctgtggcacctggcaccatc                                                                                                                                                                                                >  1:103944‑M1/1‑3 (MQ=255)                                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                                               AATCATGAAGAGGCTCCCATTGGGTGCAGGCGGTCGGCGACGTCATTACGTACAGCTTCGTCATGGAAGATGCCTACGATGGCTGCGCCACGGGTTTTGGCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCGCTGGCGCGGTGACCAGGTCTACCCACTCGTCACCGTGTTTGATCTGGATTTGACCTTCGTCGGGCAGATAGTTGGCGTACAGCGAGCGTAGCAGAG  >  CP009273/4307030‑4307567

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.