New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 4307297	53 (1.320)	4 (0.110)	4/292	NT	7.7%	coding (416/681 nt)	phnL	ribophosphonate triphosphate synthase subunit; putative ABC transporter ATP‑binding protein
	?	CP009273	= 4307349	46 (1.220)					coding (364/681 nt)	phnL	ribophosphonate triphosphate synthase subunit; putative ABC transporter ATP‑binding protein

TACAGCTTCGTCATGGAAGATGCCTACGATGGCTGCGCCACGGGTTTTGGCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCGCTGGCGCGGTGACCAGGTCTACCCACTCGTCACCGTGTTTGATCTGGATTTGACCTTCGTCGGGCAGATAGTTGGCGTACAGCGAGCGTAGCAGAGTTGATTTGCCGCTGCCGGAATGGCCGTGGAGCACCACGCATTCGCCCGCGTTG  >  CP009273/4307080‑4307620                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                                tacgtgttcgtcctGCTAGAGTCCTACGGTGGTTGCGCAGCGGGTTTGGGCTGCGAGACTCGGTTCCACCCCCGCGGCGCTGTTTTTGGCGTCCAGCGGGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCGGCTGGTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGcgg                                                                                                                                                                                                                                                                              >  2:292446‑M2/7‑270 (MQ=255)   cAGCTTCGTCATGGAAGATGCCTACGATGGCTGCGCCACGGGTTTTGTCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTGCAGGCGGGGGAGCAGACGCGCGGCTTTAGCGGAGCAGGCTTCCCGcggaac                                                                                                                                                                                                                                                                           <  1:292451‑M2/274‑7 (MQ=255)    aGCTTCGTCATGGAAGATGCCTACGATGGCTGCGCCACGGGTTTTGGCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGGAGGCTTCACGcggaacgc                                                                                                                                                                                                                                                                         <  1:167482‑M2/275‑9 (MQ=255)     gtttcgTCATGGAAGATGCCTACGAGTGCTTCGCCACGGGTTTTGGCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGcggaacgc                                                                                                                                                                                                                                                                         >  1:260510‑M2/3‑266 (MQ=255)     gCTTCGGCATGGAATATGCCTACGATGGCTGCGCCACGGGTTTTGGCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGAGAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGcggaacgc                                                                                                                                                                                                                                                                         >  1:338474‑M2/1‑266 (MQ=255)                gAAGATGCCTACGATGGCTGCGCCACGGGTTTCGGCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGAGAGCAGACGAGCGGCTTTAACGGCGCAGGATTCACGCGAACCGACGGTATCGagca                                                                                                                                                                                                                                                             >  1:214966/1‑275 (MQ=255)                 aaagagCCGACGATGGCGGCGGCCCGGGTTTTGGCGTGGCGAATCACTTCCGCCACCGCGGCGCTGTTTTTGGGGTCCAGCGAGGCGGTAGGTTCGTCGAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGGTGCCGCGCTGGTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCCCGTTCAGGCGGGTGAGAAGACGCGCCGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGagcag                                                                                                                                                                                                                                                            <  2:167480/270‑1 (MQ=255)                     tGCCTACGATGGCTGCGCCACGGGGTTTGGCTTCGCGAATCAGTTCCACCACCGCGCCGCTGTTTTTGGCGTCCAGCGAGGCGCGAGGTTCTTCAAGCCGCCGATTGGTGTACTCGACGCTAAAGCCGCTGGCGATGTTGACGCGCTGCTGTTCTCCACCGGTAAATCCCGCTGGTGCCAGCTGCCACTGGCGTTGCGGCGCGTCCCGTCGGTGGCGCAGACCGGCGGCTTTGGCGGCGCCGGCGTCCCGCAGAACGCCGGtccgggtcccgga                                                                                                                                                                                                                                                         >  2:689284/1‑262 (MQ=255)                          aCGATGGCTTCGCCCCGGGTTTTGGCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGATGCGGTAGGTTCGTCANGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACTCGGAAGGACGGTATCGAGCAGCGGCTGCa                                                                                                                                                                                                                                                    <  1:517569/274‑1 (MQ=255)                             atggttcggcaaCGGGTTTTGGCTTTGCGAATCAGTTCCACGACCGCGGTGCTGGTTTTGGCGGCCAGCGAGGCGGTAGGTGCGTCAAGCAGCAGAATGGGGCAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGGGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTGCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATca                                                                                                                                                                                                                                                 <  1:179157/263‑1 (MQ=255)                                 cTGCGCCACGGGTTTTGGCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCCGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTACGGCACGTTCCAGCGGGTGAGAAGACGTCGGGCCTTAGGGGCGCAGGCTTGACCAGGACCGCCGGGTTGGAGCAGCGGccgnctgtctctc                                                                                                                                                                                                                                            >  2:269517/1‑263 (MQ=255)                                    cgcCACGGGTTTTGGCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGCGTGGGGTAGTCGACGCTACAGCCGCGGGCGATGTTGCCGCGCACCTGTTGGCCACCGGAACATGTCGCTGGTGCCAGGTGCCACCGGCGTTCCGGCCCGTTCACGCGGTTGACACGACGCGCGACTTTAGCGACGCCGGCGGCACCGGGAAAGGCGGGCCCGCGCCGGGGCTGCATCACCGCGTcc                                                                                                                                                                                                                                         >  2:730913/1‑275 (MQ=255)                                          gggTTTTGGCTTCGCGAATCAGTTCCACCACCGCAGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGTGTTCCGGCACGTNCAGGCGGGNGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGCACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCACGTGCt                                                                                                                                                                                                                                   >  1:482802/1‑275 (MQ=255)                                                      cgcgAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGATCAGGCGGGTGANAAGACGCGNGGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCgg                                                                                                                                                                                                                        >  1:486886/1‑274 (MQ=255)                                                                         cgcgGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGGCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGACCGCCGGTAGCGAGAAGCGGCGGCAGCAGCACTGCCGGGGCTGCGATACGCGGGAGGAGGGGCAGAAACGGGc                                                                                                                                                                                                    >  2:202020/1‑275 (MQ=255)                                                                          gcggcgCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCCCCACTTCCCGTGCTGCGATCCGCGGGATGCCGCGCCGCAACTGGcc                                                                                                                                                                                                   >  2:683488/1‑274 (MQ=255)                                                                               gcggTTTTTGGCGTCCAGCGGGTCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCAcc                                                                                                                                                                                               <  1:202022/271‑1 (MQ=255)                                                                                cTGTTTTTGGTGTCCAGCGAGGCGGTAGGTTCGGCAAGCAGCAGATTGGGGTAGTCGATGATAACGCCGCGGGCGATGTTGGCGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACATGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCAccc                                                                                                                                                                                              <  1:587290/274‑1 (MQ=255)                                                                                           gTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGAcggcgg                                                                                                                                                                                  >  1:422826/1‑275 (MQ=255)                                                                                               agcttggcggtaGGTTCGTCAAGCAGCGGAATCGAGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTGGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGcgg                                                                                                                                                                                                                                                                              >  1:645235‑M2/6‑176 (MQ=255)                                                                                                              tCGTCAAGCAGCAGAATGGGGTAGTCGAGCATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCNGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTAACCCAGCCGACGGTGGTTTTGCGGAATTcaacaa                                                                                                                                                                >  1:524535/1‑272 (MQ=255)                                                                                                                              tGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGc                                                                                                                                                                                                                                                        >  2:40893/1‑170 (MQ=255)                                                                                                                                  gTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCa                                                                                                                                                                                                                                                    <  1:40894/170‑1 (MQ=255)                                                                                                                                    aGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCNGCTTTAGCGGTACAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCGCTGGCGCGGTGAc                                                                                                                                          <  1:683502/274‑1 (MQ=255)                                                                                                                                     ggggacgaAAAGGCCGCGGGCGCGGTTGGCGCGCGGCTGTTCGCCACGGGTAAATGTCGTGGGTGCCAGGTGCCACAGGCGTGCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTGGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCGCTGGCGCGGTGAc                                                                                                                                          <  2:605878/270‑1 (MQ=255)                                                                                                                                     gTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAAGGTCGATGGTGCCAGGTGCCACATGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCGCTGGCGCGGTGAc                                                                                                                                          <  1:727252/273‑1 (MQ=255)                                                                                                                                      tCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGc                                                                                                                                                                                                                                    >  1:152176/1‑182 (MQ=255)                                                                                                                                        ggcgaTAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGAGCGGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGGGGTGTTGCGGATTTACACCACTGTGCGCGCTGGCGCGGTGAACAgg                                                                                                                                      >  1:6376/3‑274 (MQ=255)                                                                                                                                          cgaTAAAGCGGCGGGCGATGTGGACGCGCTGGTGTTCGACAACGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGGTCCGGGACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGTGCAGGCTTCACGCGGAACGCCGGTATCGGGCAGCGGCTGCATCACCACGTCCAGTGCTgag                                                                                                                                                                                                                                <  2:152175/182‑1 (MQ=255)                                                                                                                                              aaaGCCGCGGGAGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGcgg                                                                                                                                                                                                                                                                              >  2:190987‑M2/1‑129 (MQ=255)                                                                                                                                               acgCCGCGGGCGAGGTTGACGCGCTGCTGTGCGCCACCGGAAAATGTCGATGGGGCCAGGTGCCACAGGCGTTACGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCGCTGGCGCGGTGACCAGGTCTAccc                                                                                                                               <  1:50313/272‑1 (MQ=255)                                                                                                                                                aGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCCCCGGAAAATGTCGATTGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCCGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCCGCATCCCCCCTTCCAGTCCTGAGATCCTCGGCCTGCCGCTCAGCAACCGGCCCACCCACCCGACGGTAGTTGTTCGGCTTTCCCCCACTTTGCGCCCCGGCGCCGTAGCCACGTCTccccc                                                                                                                              >  2:50312/1‑273 (MQ=255)                                                                                                                                                                   gcgtggcgtgtagCCACAGGAAACGGTCGATGGTGACAGGTGCTACAGGAGTTCCGGCGCGTTCAGGCGGGGGGGAAGTCGCGCGGCTTTAGCGGCGCAGGCTTCGCGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCGCTGGCGCGGTGACCAGGTCTACCCACTCGTCACCGTGTTTGATc                                                                                                           <  2:214964/262‑1 (MQ=255)                                                                                                                                                                      ctgctgTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCGCTGGcgcg                                                                                                                                               >  1:623925/1‑235 (MQ=255)                                                                                                                                                                          tgTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCGCTGGCGCGGTGa                                                                                                                                           <  2:623911/235‑1 (MQ=255)                                                                                                                                                                               gCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATcacca                                                                                                                                                                                                                                              >  2:505877/1‑131 (MQ=255)                                                                                                                                                                                   ccGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCCAGCAGCGGCTGCATCACCACTTc                                                                                                                                                                                                                                          <  1:505886/131‑1 (MQ=255)                                                                                                                                                                                           tGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCGCTGGCGCGGGGACCAGGTCTACCCACTCGTCACCGGGTTTGATCTGGATTTGACCTTCGTCGGGCAGAt                                                                                  >  1:593195/1‑275 (MQ=255)                                                                                                                                                                                               gATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGcgg                                                                                                                                                                                                                                                                              >  1:103944‑M2/1‑80 (MQ=255)                                                                                                                                                                                                       caggtgccaCAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCNGCGGCTGCATCACCACTTCTAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCGCTGGCGCGGTGACCAGGTCTACCCACTCGTCACCGTGTTTGATCTGGATTTGACCTTCGTCGGGCAGATAGTTGGCGTACa                                                                      <  1:564665/275‑1 (MQ=255)                                                                                                                                                                                                       caggggccaCGGGCGGTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGAACGTCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGAGACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCGCTGGCGCGGTGACCAGGTCTACCCACTCGTCACCGTGTTTGATCTGGATTTGACCTTCGTCGGGCAGATAGTTGGCGTACa                                                                      <  1:689298/275‑1 (MQ=255)                                                                                                                                                                                                                       tCCGGCACGCTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCGCTGGCGCgg                                                                                                                                              >  1:548704/1‑187 (MQ=255)                                                                                                                                                                                                                           gCACGCTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCGCTGGCGCGGTGAc                                                                                                                                          <  2:548693/187‑1 (MQ=255)                                                                                                                                                                                                                                      cGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGcggaacgcctgtggcacctggcaccatcgacatttt                                                                                                                                                                                                                                             <  1:465754‑M2/77‑37 (MQ=255)                                                                                                                                                                                                                                         gTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGcggaacgcctgtggcacctggcaccatcgacattttccg                                                                                                                                                                                                                                          <  1:387221‑M2/77‑40 (MQ=255)                                                                                                                                                                                                                                          tGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGcggaacgcctgtggcacctggcaccatcgacattttccgg                                                                                                                                                                                                                                         >  2:465747‑M2/1‑37 (MQ=255)                                                                                                                                                                                                                                            tataagagacaggCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCGCTGGCGCGGTGACCAGGTCTACCCACTCGTCACCGTGTTTGATCTGGATTTGACCTTCGTCGGGCAGATAGTTGGCGTACAGCGAGCGTAGCAGAGTTGATTTGCCGCTGCCGGAAt                                  <  1:210474/263‑1 (MQ=255)                                                                                                                                                                                                                                             gaagaCGCGCGGCTTTAGCGGCGCAGGCTTCACGcggaacgcctgtggcacctggcaccatcgacattttccggtgg                                                                                                                                                                                                                                      >  2:387214‑M2/1‑34 (MQ=255)                                                                                                                                                                                                                                                   gcgcgGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCa                                                                                                                                                                                                 >  1:435700/1‑108 (MQ=255)                                                                                                                                                                                                                                                      cgGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACGGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCGCTGGCGCGGTGACCAGGTCTACCCACTCGTCAc                                                                                                                      <  1:136493/180‑1 (MQ=255)                                                                                                                                                                                                                                                       ggCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGcccaccca                                                                                                                                                                                             <  2:435693/108‑1 (MQ=255)                                                                                                                                                                                                                                                                   gcAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATATGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCGCTGGCGCGGTGACCAGGTCTACCCACTCGTCACCGTGTTTGATCTGGATTTGACCTTCGTCGGGc                                                                                      >  1:180581/1‑199 (MQ=255)                                                                                                                                                                                                                                                                   gcAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCGCTGGCGCGGTGACCAGGTCTACCCACTCGTCACCGTGTTTGATCTGGATTTGACCTTCGTCGGGCAGATAGTTGGCGTCCAGCTCGCGTAGCAGAGTTGATTTGCCGCGGCAGGAATGGTCGTGGAGCACGCCGCAtt             >  2:319797/1‑272 (MQ=255)                                                                                                                                                                                                                                                                   gcAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCGCTGGCGCGGTGACCAGGTCTACCCACTCGTCACCGTGTTTGATCTGGATTTGACCTTCGTCGGGCAGATAGTTGGCGTACAGCGAGCGTAGAAGAGTTGATTTGCCGCTGCCGGACTGGCCGTGGAGCACCACGCCTTCg           >  1:134609/1‑274 (MQ=255)                                                                                                                                                                                                                                                                   gcAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCCCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCGCTGGCGCGGTGACCAGGTCTACCCACTCGTCCCCGTGTTTGATCTGGATTTGACCTTCGTCGGGCAGCTAGTTGGCGTACAGGCAGCGTCGCAGGGGTGATTTGCCGCTGCCGGACTGGCCGGGgcgcctgtctcttccc           >  2:210472/1‑262 (MQ=255)                                                                                                                                                                                                                                                                       gCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATATGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCGCTGGCGCGGTGACCAGGTCTACCCACTCGTCACCGTGTTTGATCTGGATTTGACCTTCGTCGGGCAGAt                                                                                  <  2:180579/199‑1 (MQ=255)                                                                                                                                                                                                                                                                       gCTTCACGCGGAACGCCGGTAGCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCGCTGGCGCGGTGACCAGGTCTACCCACTCGTCACCGTGTTTGATCTGGATTTGACCTTCGTCGGGCAGATAGTTGGCGTACAGCGAGCGTAGCAGAGTTGATTTGCCGCTGCCGGAATGGCCGTGGAg                        <  1:319803/257‑1 (MQ=255)                                                                                                                                                                                                                                                                       gCTCCACGCGGTGCGCCGGTTTCGATCAGCCGCTGCATCACCACGTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCGACCACTTTGCGCGCTGGCGCGGTGACCAGGTCTACCCACTCGTCACCGTGTTTGATCTGGATTTGACCGTCGTCGGGCAGATAGTTGGCGTACAGCGAGCGTAGCAGAGTTGATTTGCCGCTGCCGGAATGGCCGTGGAGCACCACGCATTCGCCcg       <  2:134608/274‑1 (MQ=255)                                                                                                                                                                                                                                                                         ttCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCGCTGGCGCGGTGACCAGGTCTACCCACTCGTCACCGTGTTTGATCTGGATTTGACCTTCGTCGGGCAGATAGTTGGCGTACagcgagc                                                                >  2:191350/1‑215 (MQ=255)                                                                                                                                                                                                                                                                            aCGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGG‑TTTGCGGATTTCCACCACTTTGCGCGCTGGCGCGGTGACCAGGTCTACCCACTCGTCCCCGTGTTTGATCTGGATTTGACCTTCGTCGGGCAGATAGTCGGCGTACAGCGAGCGTAGCAGAGTTGATTTGCCGCTGCCGGAAGGGCGGTTNATCCCCACCCATccccccctcttt  >  2:481962/1‑267 (MQ=255)                                                                                                                                                                                                                                                                             cgcgGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCGCTGGCGCGGTGACCAGGTCTACCCACTCGTCACCGTGTTTGATCTGGATTTGACCTTCGTCGGGCAGATAGTTGGCGTACAGCGAGCGTAg                                                            <  1:191352/215‑1 (MQ=255)                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                                TACAGCTTCGTCATGGAAGATGCCTACGATGGCTGCGCCACGGGTTTTGGCTTCGCGAATCAGTTCCACCACCGCGGCGCTGTTTTTGGCGTCCAGCGAGGCGGTAGGTTCGTCAAGCAGCAGAATGGGGTAGTCGACGATAAAGCCGCGGGCGATGTTGACGCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGCTCACCCAGCCGACGGTGGTTTTGCGGATTTCCACCACTTTGCGCGCTGGCGCGGTGACCAGGTCTACCCACTCGTCACCGTGTTTGATCTGGATTTGACCTTCGTCGGGCAGATAGTTGGCGTACAGCGAGCGTAGCAGAGTTGATTTGCCGCTGCCGGAATGGCCGTGGAGCACCACGCATTCGCCCGCGTTG  >  CP009273/4307080‑4307620

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.