New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	4326002 =	21 (0.520)	4 (0.100)	3/298	NT	14.5%	coding (847/1338 nt)	adiC	arginine:agmatine antiporter
	?	CP009273	4326087 =	27 (0.700)					coding (762/1338 nt)	adiC	arginine:agmatine antiporter

GCACAGGTGTAAAGATATGGCACCAGTGTAAAGATGACCGAGACGGAAGAAACCAGACCGAACTCTTTGGTCGCGTTTGGTGAAATGCTGCTGAGCTGGAAGATGGTCATCAAAATACCGACGATAATCAGCCCCGCCACTGGCGTACCCGCTTTATTTACACGGGCAAAAATCGGTGGGAACAGTCCGTCATCGGCAGCGGCTTTCGCCGTTTGACCCGCCAGCAACGTCCAGCCGCCCAGTGAACCTAAGCAACCCGCAGCTGCGCAGAAGGAAACAATGGCCCCGGCGGTGTCACCCAACGCCATCCGTGCGGCATCACCGAATGGCGAAGCAGAAACGCGCAGTGCGGCATTAGGGATCATCCCCATAATCGCGGTGGTAGAAAGTACATAGCAAACGGCGGCAATCAATACCCCACCAATGGTGGCGATAGGGACATTGCGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACA  >  CP009273/4325740‑4326247                                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                      gcACAGGGGTAAAGATATGGCACCAGTGTAAAGATGACCGAGACGGAAGAAACCAGACCGAACTCTTTGGTCGCGTTTGGTGAGATGCTGCTGAGCTGGAAGATGGTCATCAAAATACCGACGATAATCAGCTCCGCCACTGGGGTACCCGCTTTATTTACACGGGCAAAAAACGGTGGGAACAGTCCGTCATCGGCAGCGGCTCTCGACGATTGAACCGCCAACAACGTCGAGACGCCCAGTGAACATAAGCAACCCGACGCCGCGCAGaa                                                                                                                                                                                                                                              >  2:712715/1‑272 (MQ=255)                 atGGCACCAGTGTAAAGATGACCGAGACGGAAGAAACCAGACCGAACTCTTTGGTCGCGTTTGGTGAAATGCTGCTGAGCTGGAAGATGGTCATCAAAATACCGACGATAATCAGCCCCGCCACTGGCGTACCCGCTTTATTTACACGGGCAAAAATCGGTGGGAACAGTCCGGCATCGGCAGCTGCTTTCGCCGATTGACCCGCCAGCAACGTCCAGCCGCACAGTGAAACTCAGCAACCCGCAGCTGCGCAGAAGCAAACaaagacaccgcc                                                                                                                                                                                                                            >  1:706396/1‑264 (MQ=255)                 atGGCACCAGTGTAAAGATGACCGAGACAGAAGAAACCAGACCGAACTCTTTGGTCGCGTTTGGTGAAATGCTGCTGAGCTGGAAGATGGTCATCAAAATACCGACGATAATCAGCCCCGCCACTGGCGTACCCGCTTTATTTACACGGGCAAAAATCGGTGGGAACAGTCCGTCATCGGCAGNGGCTTTCGCCGTTTGACCCGCCAGCAACGTCCAGCCGCCCAGTGAACCTAAGCAACCCGCAGCTGCGCAGAAGGAAACAATGGCCCcggc                                                                                                                                                                                                                            >  1:539540/1‑274 (MQ=255)                                                                            tttGGTGAAATGCTGTTGAGCTGGAAGAGGGTCATCAAAATACCGACGATAATCAGCCCCGCCACTGGCGTACCCGCTTTATTTACACGGGCAAAAATCGGTGGGAACAGTCCGTCATCGGCAGCGGCTTTCGCCGTTTGACCCGCCAGCAACGTCCAGCCGCCCAGTGAACCTAAGCAACCCNCAGCTGCGCAGAAGGAAACAATGGCCCCGGCGGTGTCACCCAACGCCATCCGTGCGGCATCACCGAATGGCGAAGCAGAAACGCGCAggg                                                                                                                                                                 >  1:509596/1‑272 (MQ=255)                                                                            tttGGTGAAATGCTGCTGAGCTGGAAGATGGTCATCAAAATACCGACGATAATCAGCCCCGCCACTGGCGTACCCGCTTTATTTACACGGGCAAAAATCGGTGGGAACAGTCCGTCATCGGCAGCGGCTTTCGCCGTTTGACCCGCCAGCAACGTCCAGCCGCCCAGTGAACCTAAGCAACCCGCAGCTGCGCAGAAGGAAACAATGGCCCCGGCGGTGTCACCCAACGCCATCCGCGCGGCATCACCGACTGGCGAAGCACAAACGCGCacggc                                                                                                                                                                >  2:39784/1‑271 (MQ=255)                                                                                                   gAAGATGGTCATCAAAATACCGACGATAATCAGCCCCGCCACTGGCGTACCCGCTTTATTTACACGGGCAAAAATCGGTGGGAACAGTCCGTCATCGGCAGCGGCTTTCGCCGTTTGACCCGCCAGCACCGTCCAGCCGCCCAGTGAACCTAAGCAACCCGCAGCTGCGCAGAAGGAAACAATGGCCCCGGCGGCGTCACCCAACGCCATCCGTGCGGCATCCACGAAGGGCGAAGCAGAAACGCGAAGCGGGGCATCGGGGAGCATCcacagac                                                                                                                                         >  2:202517/1‑272 (MQ=255)                                                                                                          gTCATCAAAATACCGACGATAATCAGCCCCGCCACTGGCGTACCCGCTTTATTTACACGGGCAAAAATCGGTGGGAACAGTCCGTCATCGGCAGCGGCTTTCGCCGTTTGACCCGCCAGCAACGTCCAGCCGCCCAGTGAACCTAAGCAACCAGCAGCTGCGCAGAAGGAAACAATGGCCCCGGCGGTGTCACCCAACGCCATCCGTGCGGCATCACCGAATGGCGa                                                                                                                                                                                  >  1:651786/1‑227 (MQ=255)                                                                                                               aaacatcccGACAATAATCACCCCCGCCCCTGCCGTACCCGCTTTATTTACACGGGCAAAAATCGGTGAGAACAGCCCGTCAGCGGCAGCGGCTTTCTCCGTTTGACCCGCCAGCAACGTCCAGCCGCCCAGTGAACCTACGCAACCCGCAGCTGCGCAGAAGGAAACAATGGCCCCGGCGGTGTCACCCAACGCCATCCTTGCGGCATCACCGAATGGCGAAGCAGAAACGCGCAGTGCGGCATTAGGGATCATCCCCATAATCGCggtggt                                                                                                                               <  2:711541/266‑1 (MQ=255)                                                                                                                 aaaTACCGACGATAACCAGCCCCGCCACTGGCGTACCCGCTTTATTTACACGGGCAAAAATCGGTGGGAACAGTCCGTCATCGGCAGCGGCTTTCGCCGTTTGACCCGCCAGCAACGTCCAGCCGCCCAGTGAACCTAAGCAACCCGCAGCTGCGCAGAAGGAAACAATGGCCCCGGCGGTGTCACCCAACGCCATCCGTGCGGCATCACCGAATGGCGAAGCAGAAACGCGCAGTGCGGCATTAGGGATCATCCCCATAATCGCGGTGGTAGa                                                                                                                            <  1:39785/274‑1 (MQ=255)                                                                                                                         acgaTAATCAGCCCCGCCACTGGCGTACCCGCTTTATTTACACGGGCAAAAATCGGTGGGAACAGTCCGTCATCGGCAGCGGCTTTCGCCGTTTGACCCGCCAGCAACGTCCAGCCGCCCAGTGAACCTAAGCAACCCGCAGCTGCGCAGAAGGaaa                                                                                                                                                                                                                                         >  1:240841/1‑157 (MQ=255)                                                                                                                                         ccACTGTCGTACCCGCTTTATTTACACGCGCAAAAATCGGTGGGAACAGTCCGTCATCGGCAGCGGCTTTCGCCGTTTGACCCGCCAGCAACGTCCAGCCGCCCAGTGAACCTAAGCAACCCGCAGCTGCGCAGAAGGAAACAATGGCCCCGGCGGTGTCACCCAACGCCATCCGTGCGGCATNACCGAATGGCGAAGCAGAAACGCGCAGTGCGGCATTAGGGATCATCCCCATAATCGCGGTGGTAGAAAGTACATAGCAAACGGCGGcaatc                                                                                                   >  1:543486/1‑275 (MQ=255)                                                                                                                                                                   cGGGCAAAAATCGGTGGGAACAGTCCGTCATCGGCAGCGGCTTTCGCCGTTTGACCCGCCAGCAACGTCCAGCCGCCCAGTGAACCTAAGCAACCCGCAGCTGCGCAGAAGGAAACAATGGCCCCGGCGGTGTCACCCAACg                                                                                                                                                                                                              >  1:347657/1‑142 (MQ=255)                                                                                                                                                                     ggCAAAAATCGGTGGGAACAGTCCGTCATCGGCAGCGGCTTTCGCCGTTTGACCCGCCAGCAACGTCCAGCCGCCCAGTGAACCTAAGCAACCCGCAGCTGCGCAGAAGGAAACAATGGCCCCGGCGGTGTCACCCAACGCCATCCGTGCGGCATCACCGAATGGCGAAGCAGAAACGCGCAGTGCGGCATTAGGGATCATCCCCATAAt                                                                                                                                        >  1:96793/1‑210 (MQ=255)                                                                                                                                                                       cAAAAATCGGTGGGAACAGTCCGTCATCGGCAGCGGCTTTCGCCGTTTGACCCGCCAGCAACGTCCAGCCGCCCAGTGAACCTAAGCAACCCGCAGCTGCGCAGAAGGAAACAATGGCCCCGGCGGTGTCACCCAACGCCAt                                                                                                                                                                                                          <  2:347651/142‑1 (MQ=255)                                                                                                                                                                       cAAAAATCGGTGGGAACAGTCCGTCATCGGCAGCGGCTTTCGCCGTTTGACCCGCCAGCAACGTCCAGCCGCCCAGTGAACCTAAGCAACCCGCAGCTGCGCAGAAGGAAACAATGGCCCCGGCGGTGTCACCCAACGCCATCCGTGCGGCATCACCGAATGGCGAAGCAGAAACGCGCAGTGCGGCATTAGGGATCATCCCCATAATCGCgg                                                                                                                                   >  2:273186/1‑213 (MQ=255)                                                                                                                                                                           aaTCGGTGGGAACAGTCCGTCATCGGCAGCGGCTTTCGCCGTTTGACCCGCCAGCAACGTCCAGCCGCCCAGTGAACCTAAGCAACCCGCAGCTGCGCAGAAGGAAACAATGGCCCCGGCGGTGTCACCCAACGCCATCCGTGCGGCATCACCGAATGGCGAAGCAGAAACGCGCAGTGCGGCATTAGGGATCATCCCCATAATCGCggtggt                                                                                                                               <  1:273190/213‑1 (MQ=255)                                                                                                                                                                                                            tttCGCCGTTTGACCCGCCAGCAACGTCCAGCCGCCCAGTGAACCTAATCAACCCGCAGCTGCGCAGAAGGAAACAATGGCCCCGGCGGTGTCACCCAACGCCATCCGTGCGGCATCACCGAATGGCGAAGCAGAAACGCGCAGTGCGGCATTAGGGATCATCCCCATAATCGCGGTGGTAGAAAGTACATAGCAAACGGCGGCAATCAATACCCCACCAAtggtg                                                                                 <  1:380708/226‑1 (MQ=255)                                                                                                                                                                                                            tttCGCCGTTTGACCCGCCAGCAACGTCCAGCCGCCCAGTGAACCTAAGCAACCTGCAGCTGCGCAGAAGGAAACAATGGCCCCGGCGGTGTCACCCAACGCCATCCGTGCGGCATCACCGAATGGCGAAGCAGAAACGCGCAGTGCGGCATTAGGGATCATCCCCATAATCGCGGTGGTAGAAAGTACATAGCAAACGGCGGCAATCAATACCCCACCAATGGTGGCGATa                                                                           <  1:371785/232‑1 (MQ=255)                                                                                                                                                                                                             cgccgtttgctatgtactttctaccaccgcgattatggggatgatccctaatgccgcaCTGCGCAGAAGGAAACAATGGCCCCGGCGGTGTCACCCAACGCCATCCGTGCg                                                                                                                                                                                                   <  2:475017‑M1/53‑1 (MQ=255)                                                                                                                                                                                                             cgccgtttgctatgtactttctaccaccgcgattatggggatgatccctaatgccgcaCTGCGCAGAAGGAAACAATGGCCCCGGCGGTGTCACCCAACGCCATCCGTGCGGCATCACCGAAt                                                                                                                                                                                       <  2:58408‑M1/65‑1 (MQ=255)                                                                                                                                                                                                                gCCTTTTGACCTGCCGCCAACGTCCAGCCGCCCAGTGAACCTAAGCAACCCGCAGCTGCGCAGAAGGAAACAAGGGCCCCGGCGGTGTCACCCAACGTCATCCGTGCGGCATCACCGAATGGCGAAGCAGAAACGCGCAGTGCGGCATTAGGGATCATCCCCATAATCGCGGTGGTAGAAAGTACATAGCAAACGGCGGCAATCAATACCCCACCAATGGTGGCGATAGGGACATTGCGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGc                            <  1:408351/275‑1 (MQ=255)                                                                                                                                                                                                                 gtttgctatgtactttctaccaccgcgattatggggatgatccctaatgccgcaCTGCGCAGAAGGAAACAATGGCTCCGGCGGTGTCACCCAACGCCATCCGTGCGGCAt                                                                                                                                                                                               >  1:475025‑M1/55‑111 (MQ=255)                                                                                                                                                                                                                 gtttgctatgtactttctaccaccgcgattatggggatgatccctaatgccgcaCTGCGCAGAAGGAAACAATGGCCCCGGCGGTGTCACCCAACGCCATCCGTGCGGCATCACCGAATGGCg                                                                                                                                                                                   >  1:58409‑M1/55‑123 (MQ=255)                                                                                                                                                                                                                                        cgcgattatggggatgatccctaatgccgcaCTgc                                                                                                                                                                                                                                                    <  1:671359‑M1/4‑1 (MQ=255)                                                                                                                                                                                                                                          gccgccCAGTGAACCTACGCCACCCGCATCTGCGCAGAAGGAAACAATGGCCCCGGCGGTGTCACCCAACGCCATCCGTTCGGCATCACCGAATGGCGAAGCAGAAACGCGCAGTGCGGCATTAGGGATCATCCCCATAAGCGCGGTGGTAGAAAGTACATAGCAAACGGCGGCAATCAATACCCCACCAATGGTGGCGATAGGGACATTGCGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACcaca  <  1:712729/275‑1 (MQ=255)                                                                                                                                                                                                                                                               aCCCGCAGCTGCGCAGAAGGAAACAATGGCCCCGGCGGTGTCACCCAACGCCATCCGTGCGGCATCACCGAATGGCGAAGCAGAAACGCGCAGTGCGGCATTAGGGATCATCCCCa                                                                                                                                            >  2:241958/1‑116 (MQ=255)                                                                                                                                                                                                                                                                   gCAGCTGCGCAGAAGGAAACAATGGCCCCGGCGGTGTCACCCAACGCCATCCGTGCGGCATCACCGAATGGCGAAGCAGAAACGCGCAGTGCGGCATTAGGGATCATCCCCATAAt                                                                                                                                        <  1:241961/116‑1 (MQ=255)                                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                      GCACAGGTGTAAAGATATGGCACCAGTGTAAAGATGACCGAGACGGAAGAAACCAGACCGAACTCTTTGGTCGCGTTTGGTGAAATGCTGCTGAGCTGGAAGATGGTCATCAAAATACCGACGATAATCAGCCCCGCCACTGGCGTACCCGCTTTATTTACACGGGCAAAAATCGGTGGGAACAGTCCGTCATCGGCAGCGGCTTTCGCCGTTTGACCCGCCAGCAACGTCCAGCCGCCCAGTGAACCTAAGCAACCCGCAGCTGCGCAGAAGGAAACAATGGCCCCGGCGGTGTCACCCAACGCCATCCGTGCGGCATCACCGAATGGCGAAGCAGAAACGCGCAGTGCGGCATTAGGGATCATCCCCATAATCGCGGTGGTAGAAAGTACATAGCAAACGGCGGCAATCAATACCCCACCAATGGTGGCGATAGGGACATTGCGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACA  >  CP009273/4325740‑4326247

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.