New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 4626358	61 (1.520)	5 (0.130)	4/288	NT	8.8%	coding (535/690 nt)	creB	response regulator in two‑component regulatory system with CreC
	?	CP009273	= 4626652	47 (1.260)					coding (140/1425 nt)	creC	sensory histidine kinase in two‑component regulatory system with CreB or PhoB, regulator of the CreBC regulon

GTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGTATGAGTTTTTATTGTTGAAGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGATAGCGTATGGGAAGATGCGCAGGACACCTACGATCGCACCGTCGATACCCACATTAAAACGCTGCGTGCCAAGCTGCGCGCCATCAACCCCGATCTTTCACCGATTAATACTCATCGCGGCATGGGATATAGCCTGAGGGGCCTGTAATGCGTATCGGCATGCGGTTGTTGCTGGGCTATTTTTTACTGGTGGCGGTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGA  >  CP009273/4626085‑4626628                                                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                                               ggcGATCGCCTGCCGGGCTTGGAAATTTCTGCTGAGGACTACGAGGCTAAACCGTTTTCACCCCGCGGAGTGTGCGCCAGGGTGCGCGACTCACTGCGTCGCGTGAAGCTGTTCTCGACGCCGTCCCCCGTCATCCGTCTAGGACATTTTTAATTGAATGAACCCGCGGCGCAGACCAGCTGGTTTGACACGCAATTATCGCTGACTCGGCACGCGAGTGTCATGTTGCAGACTGTACTCAAGTCACAGGTCCCGGTCTGGCCCTGCCCGCACCt                                                                                                                                                                                                                                                                               >  2:254975/3‑275 (MQ=255)        gCCTGCTTTGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCANCTTACTGCNTCGGGTGAAGAACTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGTATGAGTTTTTATTGTTGAAGACGTTACTCAAGTCAACGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGa                                                                                                                                                                                                                                                                         <  1:480482/274‑1 (MQ=255)                 ggCTGGAATTTGGTGCTGACGACTACTTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGTATGAGTTTTTATTGTTGAAGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGATAGCGTATg                                                                                                                                                                                                                                                                <  1:70475/274‑1 (MQ=255)                          ttGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCNACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGTATGAGTTTTTATTGTTGAAGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGATAGCGTATGGGAAGATgcg                                                                                                                                                                                                                                                      <  1:535687/275‑1 (MQ=255)                           tgggtcTGACGACTACGTGGCTAAGCGGTTTGCCCCCCGCGAAGTGGGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGTATGAGTTTTTATTGTTGAAGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGATAGCGTATGGGAAGATgcgc                                                                                                                                                                                                                                                     <  2:3351/270‑1 (MQ=255)                                                       ttttCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGTATGAGTTTTTATTGTTGAGGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCCACTGATGGATAGCGTATGGGAAGCAGAGCAGGCCACCTACGATCGCACCGTCGAt                                                                                                                                                                                                                           >  1:273373/1‑273 (MQ=255)                                                        tttCACGCCGGTAAGTGTTCGACAGTGTGCGCTCCTTACTGCGTCGTGTGCAGTAGTTGTCGACGCCGTCTTCCGTCATCCGTATTGGACATTTTTCATTGAATGAACACGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGTATGAGTTTTTATTGTTGAAGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGATAGCGTATGGGAAGATGCGCAGGACACCTACGATCGCACCGTCGATAcc                                                                                                                                                                                                                        <  1:156046/275‑1 (MQ=255)                                                                 gcgAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGTATGAGTTTTTATTGTTGAAGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGATAGCGTATgg                                                                                                                                                                                                                                                               >  2:35895/1‑227 (MQ=255)                                                                     aGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGTATGAGTTTTTATTGTTGAAGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGATAGCGTATGGGAAg                                                                                                                                                                                                                                                           <  1:35896/227‑1 (MQ=255)                                                                                   tGCGCATCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGTATGAGTTGTTATTGTTGACGCCGTTACTCAAGTCACCGAGCCGCGTCTGGTCCCGCCAGCCACTgc                                                                                                                                                                                                                                                                             >  2:438163/1‑194 (MQ=255)                                                                                       ccccTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGTATGAGTTTTTATTGTTGAAGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGa                                                                                                                                                                                                                                                                         <  1:438170/193‑1 (MQ=255)                                                                                            gaCTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGNTTTGACACGCCATTAGCGCTGACTCGGTATGAGTTTTTATTGTTGAAGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGATAGCGTATGGGAAGATGCGCAGGACACCTACGATCGCACCGTCGATACCCACATTAAAACGCTGCGTGCCAAGCTGCGCGCCATc                                                                                                                                                                                    <  1:554766/274‑1 (MQ=255)                                                                                                  ttcGGGTGAAGAAGTTCTCGACGCCTTCTCCCGGTTTCCGTATTGGACATTTTGAATTGAATGAACCCGCGGGGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGTATGAGTTTTTATTGTTGAAGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACgttgcggtgtcgatcaacgtcccctccgttgctcttcgcacgcccggtttaacttctttgacaaaaatggccagtacgaaccaggctgccaccgcc                                                                                                                                                                                <  2:333461‑M1/272‑97 (MQ=255)                                                                                                    cGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGTATGAGTTTTTATTGTTGAAGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACgttgcggtgtcgatcaacgtcccctccgttgctcttcgcacgcccggtttaacttctttgacaaaaatggccagtacgaaccaggctgccaccgccac                                                                                                                                                                              >  1:333467‑M1/1‑175 (MQ=255)                                                                                                    cGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGTATGAGTTTTTATTGTTGAAGACGTTACGAAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCACCTGATGGATAGCGTATGGGAAGATGCGCAGGACCCCTACGATAGCACCGTCGa                                                                                                                                                                                                                            >  1:258074/1‑227 (MQ=255)                                                                                                      ggTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGTATGAGTTTTTATTGTTGAAGACGTTACTCAAGTCACCGGTCCGCGTCTGGTCCCGCCAGCCACTGATGGATAGCGTATGGGAAGATGCGCAGTACACCTCCGATCTCACCGTCGATACCCACATAAAACAGCTGCGCGCCCAGCTGCGCGCCCTCCAcccccct                                                                                                                                                                           >  2:260028/1‑271 (MQ=255)                                                                                                           agaagTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGTATGAGTTTTTATTGTTGAAGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGATAGCGTATGGGAAGATGCGCAGGACACCTACGATCGCACCGTCGATACCCACATTAAAACGCTGCGTGCCAAGCTGCGCGCCATCAACCCCGATCTTTCa                                                                                                                                                                     <  1:260031/275‑1 (MQ=255)                                                                                                                          cttctcccGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGTATGAGTTTTTATTGTTGAAGACGTTACTCNAGTCACCGGGACGCGCCAGCT‑CCGCCAGCAACgttgcggtgtcgatcaacgtcccctccgttgctcttcgcacgcccggtttaacttctttgacaaaaatggccagtacgaaccaggctgccaccgccaccagtaaaaaatagcccagcaac                                                                                                                                                        <  1:625232‑M1/270‑121 (MQ=255)                                                                                                                            tctcCCGTTTTCTGTTTTTGACATTTTGATTTGAATGAACCCGCGGCGCAGTTCAGCTGGTTTGACATGCCATTAGCGCTGACTCGGTATGAGTTTTTATTGTCGAAGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGATAGCGTATGGGAAGATGCGCAGGACACCTACGATCGCACCGTCGATACCCACATTAAAACGCTGCGTGCCAAGCTGCGCGCCATCAACCCCGATCTTTCACCGATTAATACTCAt                                                                                                                                                      <  1:254978/273‑1 (MQ=255)                                                                                                                               cccGTCAGTCGTATTGGCCATTTTGAATTGAATGAGCCCGCGGCGCAGATCAGCTGGTGTGACACGCCATTAGCGCTGACTCGGTATGAGTTTTTATTGTTGACGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGATAGCGTATGGGAAGATGCGCAGGACACCTACGATCGCACCGTCGATACCCACATTAAAACGCTGCGTGCCAAGCTGCGCGCCATCAACCCCGATCTTTCACCGATTAATACTCATcgcg                                                                                                                                                  <  1:465119/274‑1 (MQ=255)                                                                                                                                  gggtgcagtngtGGACCTGTTGAATGGCAGCAACCGGCGCGGCTGTTCTGCTGGTTTGTCACGCCATTAGCGTTGACTAGGGATGATGTGGTAGTGTTGAAGACGTTACGCAAGTCCCCGGGCCGCGTCAGGTCCCGATAGCAACTGGTGGATAGCGTATGGGAAGATGCGCAGTATACCTACGATCGCACCGTCGATACCCACATTAAACCGCTGCGTGCCAAGCTGCGCGCCAGCAACCCCGATCTTTCACCGATTAATCCTCATCGCGGCAt                                                                                                                                              <  2:273369/264‑1 (MQ=255)                                                                                                                                    cATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGTATGAGTTTTTATTGTTGAAGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACgttgcggtgtcgatcaacgtcccctccgttgctcttcgcacgcccggtttaacttctttgacaaaaatggccagtacgaaccaggctgccaccg                                                                                                                                                                                  >  1:328199‑M1/1‑143 (MQ=255)                                                                                                                                    cATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGTATGAGTTTTTATTGTTGAAGACGTTACTCAAGTCACCGGGACGCGCCAGCT‑CCGCCAGCAACgttgcggtgtcgatcaacgtcccctccgttgctcttcgcacgcccggtttaacttctttgacaaaaatggccagtacgaaccaggctgccaccgcccacaggaaaaaatagcccagcaacaaccgcacccccc                                                                                                                                           >  2:625218‑M1/1‑142 (MQ=255)                                                                                                                                          tATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGTATGAGTTTTTATTGTTGAAGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGATAGCGTATGGGAAGATGCGCAGGACACCTACGATc                                                                                                                                                                                                                                      >  1:222725/1‑179 (MQ=255)                                                                                                                                          tATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGTATGAGTTTTTATTGTTGAAGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGATAGCGTATGGGAAGATGCGCAGGACACCTACGATCGCACCGTCGATACCCACATTAAAACGCTGCGTGCCAAGCTGCGCGCCATCAACCCCGATCTTTCACCGATTAATACTCATCGCGGCATGGGAtata                                                                                                                                      >  1:49715/1‑275 (MQ=255)                                                                                                                                             tGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGTATGAGTTTTTATTGTTGAAGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGATa                                                                                                                                                                                                                                                                       >  1:585860/1‑143 (MQ=255)                                                                                                                                              ggACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGTATGAGTTTTTATTGTTGAAGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGATAGCGTATGGGAAGATGCGCAGGACACCTACGATCGCAc                                                                                                                                                                                                                                  <  2:222723/179‑1 (MQ=255)                                                                                                                                                tcATTTTGAAGTGAATTAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGTATGATTTTTTATTGTTGAAGGCGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGATAGCGTATGGGAAGATGCGCAGGACACCTACGATCGCACCGTCGATACCCACATTAAAACGCTGCGTGCCAAGCTGCGCGCCATCAACCCCGATCTTTCACCGATTAATACTCATCGCGGCATGGGATATAGCCTGa                                                                                                                                <  1:276806/274‑1 (MQ=255)                                                                                                                                                 cATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGTATGAGTTTTTATTGTTGAAGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGATAGCGt                                                                                                                                                                                                                                                                   <  2:585847/143‑1 (MQ=255)                                                                                                                                                  tgtttGAATGTAATGAACCGGCGGGGCAGATCAGCTGGTTTGACAAGCCATTAGCGCTGGGTCGGTATGAGTTTTTATTGTTGCAGACGTTAATCAAGTCACCGGGCCGAGTCGGGTCCCGCCAGCAACTGATGGATAGCGTATGGGAAGATGCGCAGGACACCTACGATCGCACCGTCGATACCCACATTAAAACGCTGCGTGCCAAGCTGCGCGCCATCAACCCCGATCTTTCACCGATTAATACTCATCGCGGCATGGGATATAGCCTGAg                                                                                                                               <  2:694680/272‑1 (MQ=255)                                                                                                                                                    tttGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGTATGAGTTTTTATTGTTGAAGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGa                                                                                                                                                                                                                                                                             >  1:445709/1‑130 (MQ=255)                                                                                                                                                    tttGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGTATGAGTTTTTATTGTTGAAGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGATAGCGTATGGGAAGATGCTCAGGACACCTACGATCGCACCGTCGATACCCACATTAAAACGTTGCGTGCCAAGCTGCGCGCCATCAACCCCGATCTTTCACCGATTAATACTCATCGCGGCATGGGATATAGCCTGAggg                                                                                                                             >  1:694694/1‑274 (MQ=255)                                                                                                                                                    tttGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGTATGAGTTTTTATTGTTGAAGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGATAGCGTATGGGAAGATGCGCAGGACACCTACGATCGCACCGTCGATACCCACATTAAAACGCTGCGTGCCAAGCTGCGCGCCATCAACCCCGATCTTTCACCGATTAATACTCATCGCGGCAt                                                                                                                                              >  1:28868/1‑257 (MQ=255)                                                                                                                                                    tttGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGTATGAGTTTTTATTGTTGAAGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGATAGCGTATGGGAAGATGCGCAGGACACCTACGATCGCACCGTCGATACCCACATTAAAACGCTGCGTGCCAAGCTGCGCGCCATCAACCCCGATCTTTCACCGATTAATACTCATCGCGGCAt                                                                                                                                              <  2:28867/257‑1 (MQ=255)                                                                                                                                                    tttGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGTATGAGTTTTTATTGTTGAAGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGATAGCGTATGGGAAGATGCGAAGGACACCTACGATCGCACCGTCGATACCCACATTAAAACGCTGCGTGCCCAGCTGCGCGCCATCAACCCCGATCTTTCACAGATTAATACTCACCACGGCATGGGATAAAGCCTAAggg                                                                                                                             >  1:77097/1‑274 (MQ=255)                                                                                                                                                        aattgaatGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGTATGAGTTTTTATTGTTGAAGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGa                                                                                                                                                                                                                                                                         <  2:445702/130‑1 (MQ=255)                                                                                                                                                         attgaatGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGTATGAGTTTTTATTGTTGAAGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGATAGCGTATGGGAAGATGCGCAGGACACCTACGATCGCACCGTCGATACCCACATTAAAACGCTGCGTGCCAAGCTGCGCGCCATCAACCCCGATCt                                                                                                                                                                         >  1:48159/1‑225 (MQ=255)                                                                                                                                                         attgaatGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCAGTAGCGCTGACTCGGTATGAGTTTTTATTGTTGAAGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCCGCCACTGATGTATAGCGTATGGGAAGATGCGCAGGACACCTACGATCGTACCGTCGATCCCCCCCTNACAACGCTTCg                                                                                                                                                                                                       >  1:575615/1‑195 (MQ=255)                                                                                                                                                             aatgaaCCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGTATGAGTTTTTATTGTTGAAGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGATAGCGTATGGGAAGATGCGCAGGACACCTACGATCGCACCGTCGATACCCACATTAAAACGCTGCGTGCCAAGCTGCGCGCCATCAACCCCGATCTTTCa                                                                                                                                                                     <  2:48158/225‑1 (MQ=255)                                                                                                                                                             aatgaaCCCGCGGCGCAGATCAGCTGGTTGGACACGCCATTAGCGCTGACTCGGTATGAGTTTTTATTGTTGAAGACGTTACTCAAGTCACCGGGCCGCGTCTTGTCCCGCCAGCAACTGATGGATAGCGTATGGGAAGATGCGCAGGACACCTACGATCGCACCGTCGATACCCACATTAAAACGCTGCGTGCCAAGCTGCGCGCCATCAACCCCGATCTTTCACCGATTAATACTCATCGCGGCATGGGATATAGCCTGAGGGGCCTGTAAt                                                                                                                    <  1:469576/274‑1 (MQ=255)                                                                                                                                                                                    cTGGTTTGACACGCCATTAGCGCTGACTCGGTATGAGTTTTTATTGTTGAAGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGATa                                                                                                                                                                                                                                                                       >  2:549483/1‑104 (MQ=255)                                                                                                                                                                                        tttGACACGCCATTAGCGCTGACTCGGTATGAGTTTTTATTGTTGAAGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGATAGCGt                                                                                                                                                                                                                                                                   <  1:549494/104‑1 (MQ=255)                                                                                                                                                                                         ttGACACGCCATTAGCGCTGACTCGGTATGAGTTTTTATTGTTGACGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGATAGCGTATGGGGAGATGCGCAGGACACCTACGATCGCACCGTCGATACCCACATTAAAACGCTGCGTGCCAAGCTGCGCGCCATCAACCCCGATCTTTCACCGATTAATACTCATCGCGGCATGGGATATAGCCTGAGGGGCCTGTAATGCGTATAGGCATGCGgtt                                                                                                  >  1:36468/1‑264 (MQ=255)                                                                                                                                                                                                 ccATTAGCGCTGACTCGGTATGAGTTTTTATTGTTGAAGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGATAGCGTATGGGAAGATgcgc                                                                                                                                                                                                                                                     >  2:40741/1‑109 (MQ=255)                                                                                                                                                                                                 ccATTAGCGCTGACTCGGTATGAGTTTTTATTGTTGAAGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGATAGCGTATGGGAAGATGCGCAGGACACCTACGATCGCACCGTCGATACCCACATTAAAACGCTGCGTGCCAAGCTgcgcgc                                                                                                                                                                                        >  1:173249/1‑170 (MQ=255)                                                                                                                                                                                                 ccATTAGCGCTGACTCGGTATGAGTTTTTATTGTTGAAGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGATAGCGTATGGGAAGATGCGCAGGACACCTACGATCGCACCGTCGATACCCACATTAAAACGCTGCGTGCCAAGCTGCGCGCCATCAACCCCGATCTTTCACCGATTAATACTCATcg                                                                                                                                                    >  1:150541/1‑206 (MQ=255)                                                                                                                                                                                                  cATTAGCGCTGACTCGGTCTGAGTTTTTATTTTTGAAGACGTTACTCAAGTCACCGCGCCGCGTCTGGTCCCGCCAGCAACTGATGGATAGCGCATGGGAAGAGGCGCAGGACGCCTACGAGCGCACCGTCGATACCCAACTTCAAACTCAACTCGCCCAGCTGCACGCCATCAACCCCGACCATTCACGGATTAATACTCACCGCGGACTGGGATATACACTAAGGGTCCTGTGATGCGTAGCGGCATGCGGTTGGTGCTGGGCTAttgtttgc                                                                              >  2:722583/1‑273 (MQ=255)                                                                                                                                                                                                  cATTAGCGCTGACTCGGTATGAGTTTTTATTGTTGAAGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGATAGCGTATGGGAAGATGCGCAGGACACCTACGATCGCa                                                                                                                                                                                                                                   >  2:50689/1‑126 (MQ=255)                                                                                                                                                                                                     tAGCGCTGACTCGGTATGAGTTTTTATTGTTGAAGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGATAGCGTATGGGAAGATGCGCAGGa                                                                                                                                                                                                                                                 <  1:40742/109‑1 (MQ=255)                                                                                                                                                                                                     tAGCGCTGACTCGGTATGAGTTTTTATTGTTGAAGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGATAGCGTATGGGAAGATGCGCAGGACACCTACGATCGCACCGTCGATACCCACATTAAAACGCTGCGTGCCAAGCTGCGCGCCATc                                                                                                                                                                                    <  2:173247/170‑1 (MQ=255)                                                                                                                                                                                                     tAGCGCTGACTCGGTATGAGTTTTTATTGTTGAAGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGATAGCGTATGGGAAGATGCGCAGGACACCTACGATCGCACCGTCGATACCCACATTAAAACGCTGCGTGCCAAGCTGCGCGCCATCAACCCCGATCTTTCACCGATTAATACTCATCGCGGc                                                                                                                                                <  2:150540/206‑1 (MQ=255)                                                                                                                                                                                                      aGCGCTGACTCGGTATGAGTTTTTATTGTTGAAGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGATAGCGTATGGGAAGATGCGCAGGACACCTACGATCGCACCGt                                                                                                                                                                                                                               <  1:50690/126‑1 (MQ=255)                                                                                                                                                                                                            gACTCGGTATGAGTTTTTATTGTTGAAGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGa                                                                                                                                                                                                                                                                         >  2:165860/1‑78 (MQ=255)                                                                                                                                                                                                            gACTCGGTATGAGTTTTTATTGTTGAAGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGATAGCGTATGGGAAGATGCGCAGGACACCTACGATCGCACCGTCGATa                                                                                                                                                                                                                          >  2:120580/1‑125 (MQ=255)                                                                                                                                                                                                                cGGTATGAGTTTTTATTGTTGAAGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGATAGc                                                                                                                                                                                                                                                                     <  1:165862/78‑1 (MQ=255)                                                                                                                                                                                                                cGGTATGAGTTTTTATTGTTGAAGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGATAGCGTATGGGAAGATGCGCAGGACACCTACGATCGCACCGTCGATACCca                                                                                                                                                                                                                      <  1:120581/125‑1 (MQ=255)                                                                                                                                                                                                                        gTTTTTATTGTTGAAGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGATAGCGTATGGGAAGATGCGCAGGACACCTACGATCGCACCGTCGATACCCACATTaaaa                                                                                                                                                                                                              >  2:510059/1‑125 (MQ=255)                                                                                                                                                                                                                            ttATTGTTGAAGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGATAGCGTATGGGAAGATGCGCAGGACACCTACGATCGCACCGTCGATACCCACATTAAAACGCt                                                                                                                                                                                                          <  1:510068/125‑1 (MQ=255)                                                                                                                                                                                                                             tATTGTTGAAGACGTTACTCAAGTCACTGGGCCGCGTCTGGTCCCTCCAGCAACTGATGGATAGCGTATGGGAAGATGCGCAGGACACCTACGATCGCACCGTCGATACCCACATTAAAACGCTGCGTGCCAATCTGCGCGCCATCAACCCCGATCTCTCACCCTTTCACACTCATCTCGCCATGCGCTAAAGCCCGCAGGTCCTGTCACCCGTATCGGCATGCGGATGCTGTTGGGCGATTTTCTCCGGGTGGTGGTGGCATCCTAGtgtttgg                                                   >  2:6194/1‑269 (MQ=255)                                                                                                                                                                                                                                 gttgAAGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGATAGCGTATGGGAAGATGCGCAGGACACCTACGATCGCACCGTCGATACCCACATTAAAACGCTGCGTGCCAAGCTGCGCGCCATCAACCCCGATCTTTCACCGATTAATACTCATCGCGGCATg                                                                                                                                             >  2:441367/1‑181 (MQ=255)                                                                                                                                                                                                                                     aaGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGATAGCGTATGGGAAGATGCGCAGGACACCTACGATCGCACCGTCGATACCCACATTAAAACGCTGCGTGCCAAGCTGCGCGCCATCAACCCCGATCTTTCACCGATTAATACTCATCGCGGCATGGGat                                                                                                                                         <  1:441374/181‑1 (MQ=255)                                                                                                                                                                                                                                            tACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGATAGCGTATGGGAAGATGCGCAGGACACCTACGATCGCACCGTCGATACCCACATTAAAACGCTGCGTGCCAAGCTGCGCGCCATCAACCCCGATCTTTCACCGATTAATACTCATcgcg                                                                                                                                                  >  1:681838/1‑165 (MQ=255)                                                                                                                                                                                                                                            tACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGATAGCGTATGGGAAGATGCGCAGGACACCTACGATCGCACCGTCGATACCCACATTAAAACGCTGCGTGCCAAGCTGCGCGCCATCAACCCCGATCTTTCACCGATTAATACTCATCGCGGCATGGGATATAGCCTGCGGGGCCGGTAATGCGTATCGGTATGCGGTTGTTGCTGGGCTCTTTTTTACTGGTGGCGGTGGCAGCCTGGGTCGTACTGGCCCTTTTTTTct                                    >  2:691392/1‑274 (MQ=255)                                                                                                                                                                                                                                                cAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGATAGCGTATGGGAAGATGCGCAGGACACCTACGATCGCACCGTCGATACCCACATTAAAACGCTGCGTGCCAAGCTGCGCGCCATCAACCCCGATCTTTCACCGATTAATACTCATCGCGGCAt                                                                                                                                              <  2:681824/165‑1 (MQ=255)                                                                                                                                                                                                                                                        ccggCCGCGTATGGTTCAACCAGCAACTGATGGACAGCGTATGCGAAGATGAGCAGTACACCTACGATCGCACCGTCGATATCCGCATCAAAACGCTGCGTGCCAAGATCCGCGCCATCAACCCCACTATTTAACCGCTTAATACCCATCGCGGCCGGGGATACAGCATGCGGGGCCGGTTATGCGGATCGCCATGCGGTCGTTTAGGCGCTTGTTTTTACTGATGGCGGTGGCAGCCGGGGGCGCACCGGCCATTTTGGTTAACGACGTaaaaa                        >  2:176310/3‑274 (MQ=255)                                                                                                                                                                                                                                                        cGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGATAGCGTATGGGAAGATGCGCAGGACACCTACGATCGCACCGTCGATACCCACATTAAAACGCTGCGTGCCAAGCTGCGCGCCATCAACCCCGATCTTTCACCGATTAATACTCATCGCGGCATGGGATATAGCCTGAGGGGCCTGTAATGCGTATCGGCATGCGGTTGTTGCTGGGCTATTTTTTACTGGTGGCGGGGGCAGGCTGGGTCGTACTGTGCCTTTTTGTCTAAGCAGGTAAAc                        >  2:112948/1‑275 (MQ=255)                                                                                                                                                                                                                                                             ggcgTCTGGTCCCGGCAGGAACTGGTGGATAGCGTATGGGAAGGTGCGCACGACACCTACGATCGCACCGTCGATACCCACATTAAAACGCTGCGTGCCAAGCTGCGCGCCATCAACCCCGATCTGTCACCGATTAATACTCATCGCGGCATGGGATATAGCCTGAGGGGCCTGTAATGCGTATCGGCATGCGGTTGTTGCTGGGCTATTTTTTACTGGTGGCGGTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGc                   <  1:6194/274‑1 (MQ=255)                                                                                                                                                                                                                                                                    gggcccGCCAGTCTCTGATGGATAGCGTCTGGGAAGATGCGCAGGACACCTACGATCGCACCGTCGATACCCACATTAAAACGCTGCGTGCCAAGCTGCGCGCCATCAACCCCGATCTTTCACCGATTAATACTCATCGCGGCATGGGATATAGCCTGAGGGGCCTGTAATGCGTATCGGCATGCGGTTGTTGCTGGGCTATTTTTTACTGGTGGCGGTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGaa            <  2:49714/272‑1 (MQ=255)                                                                                                                                                                                                                                                                           ccAGCAACTGATGGATAGCGTATGGGAAGATGCGCAg                                                                                                                                                                                                                                                   >  2:299230/1‑37 (MQ=255)                                                                                                                                                                                                                                                                              gCAACTTATGGATAGCGTATGGGAAGATGCGCAGGACACCTACGATCGCACCGTCGATACCCACATTAAAACGCTGCGTGCCAAGCTGCGCGCCATCAACCCCGATCTTTCACCGATTAATACTCATCGCGGCATGGGATATAGCCTGAGGGGCCTGTAATGCGTATCGGCATGCGGTTGTTGCTGGGCTATTTTTTACTGGTGGCGGTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGa  <  1:112949/275‑1 (MQ=255)                                                                                                                                                                                                                                                                               cAACTGATGGATAGCGTATGGGAAGATGCGCAGGaca                                                                                                                                                                                                                                               <  1:299235/37‑1 (MQ=255)                                                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                                               GTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGTATGAGTTTTTATTGTTGAAGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGATAGCGTATGGGAAGATGCGCAGGACACCTACGATCGCACCGTCGATACCCACATTAAAACGCTGCGTGCCAAGCTGCGCGCCATCAACCCCGATCTTTCACCGATTAATACTCATCGCGGCATGGGATATAGCCTGAGGGGCCTGTAATGCGTATCGGCATGCGGTTGTTGCTGGGCTATTTTTTACTGGTGGCGGTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGA  >  CP009273/4626085‑4626628

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.