New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 4626358	61 (1.520)	5 (0.130)	4/288	NT	8.8%	coding (535/690 nt)	creB	response regulator in two‑component regulatory system with CreC
	?	CP009273	= 4626652	47 (1.260)					coding (140/1425 nt)	creC	sensory histidine kinase in two‑component regulatory system with CreB or PhoB, regulator of the CreBC regulon

CATTAAAACGCTGCGTGCCAAGCTGCGCGCCATCAACCCCGATCTTTCACCGATTAATACTCATCGCGGCATGGGATATAGCCTGAGGGGCCTGTAATGCGTATCGGCATGCGGTTGTTGCTGGGCTATTTTTTACTGGTGGCGGTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGC  >  CP009273/4626417‑4626912                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                                     caTTAAAACGCTGCGTGCCAAGCTGCGCGCCATCAACCCCGATCTTTCACCGATTAATACTCATCGCGGCATGGGATATAGCCTGAGGGGCCTGTAATGCGTATCGGCATGCGGTTGTTGCTGGGCTATTTTTTACTGGTGGCGGTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTgg                                                                                                                                                                                                                               >  1:389007/1‑275 (MQ=255)      aaaCGCTGCGTGCCAAGCTGCGCTCCATCAACCCCGATCTTTTACCGATTACTACTCATCGCGGCATGGGATATAGCCTGAAGGGCCTGTAATGCGTATCGGCATGCGGTTGTTGCTGGGCTATTTTTTACTGGTGGCGGTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGAcc                                                                                                                                                                                                                          <  1:264133/275‑1 (MQ=255)                             gcCGTCCACCTCGTTCTTTTACCGATTACTTCTCATCGCGGGATTGGTTATAGCCTGAGGGGCCTGTAATGCGTATCGGCATGCGGTTGTTGCTAGGCTATTTTTTACTGGTGGCGGTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGGGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCa                                                                                                                                                                                                    <  1:176312/274‑1 (MQ=255)                                                     aTTAATACTCATCGCGGCATGGGATATAACCTGAGGGGCCTGTAATGCGTATCGGCATGCGGTTGTTGCTGGGCTATTTTTTACTGGTGGCGGTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAANGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCaa                                                                                                                                                                                                                       >  1:534570/1‑231 (MQ=255)                                                                                aGCCTGAGGGGCCTGTAATGCGTATCGGCAAGCGGTTGTTGCTGGGCTATTTTTTACTGGTGGCGGTGGAAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGAAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTGCCGATTTGGTCTCTGGGGACCCAACGCATGGGCAACTGACGCAGGCGATTAGTCAGCTACCACATAGCCCGTTTAGCGCCAATACCgggacgaa                                                                                                                                                 >  2:108028/1‑268 (MQ=255)                                                                                    agggggggttGTAAAGGGAATAGGGATGAGGTTGTTGTGGGGCTGTTTGTTTCGTGGGGGGGTGGCAGTCTGGGTTGTAATGGCCATTTTTGGAAAAGAAGTGAAACCGGGCGTTCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACa                                                                                                                                            <  2:389000/266‑1 (MQ=255)                                                                                           ccTGGAATGCGTATCGGCATGCGGTTGTTGGTGGGCTATTTTTTACTGGTGGCGGTGGCAGCCTGGTTCGTACTGGCCACTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGATGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTgcg                                                                                                                                     <  1:691406/275‑1 (MQ=255)                                                                                                       aTCGGCATGCGGTTGTTGCTGGGCTATTTTTTACTGGTGGCGGTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATAACa                                                                                                                         >  1:654728/1‑275 (MQ=255)                                                                                                        ggggggtgcggttGTTGCTGGGCTATTTTTTCCTGTGGGCGGTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACgttgctggcggagctggcgcgtcccggtgacttgagtaacgtcttcaacaataaaaactcataccgagtcagcgctaatggcgtgtcaaaccagctgatctgcgccgcgggttcattcaattcaaaatgtccaatacggatg                                                                                                                        >  2:625218‑M2/7‑133 (MQ=255)                                                                                                         cGGCATGCGGTTGTTGCTGGGCTATTTTTTACTGGTGGCGGTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGGTTAATCAGCTACAACATCGCCCGttt                                                                                                                                                                     >  1:156881/1‑229 (MQ=255)                                                                                                         cGGCATGCGGTTGTTGCTGGGCTATTTTTTACTGGTGGCGGTGGCAGCCTGGATCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAATGCGCAATGAATCTCATg                                                                                                                       >  1:239001/1‑275 (MQ=255)                                                                                                                 gggtgttgGTGGGCTTGTTTTTACGGGTGGGGGTGGCATCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTatat                                                                                                                <  2:654714/271‑1 (MQ=255)                                                                                                                     gttgCTGGGCTATTTTTTACTGGTGGCGGTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACgttgctggcggagctggcgcgtcccggtgactngagtaacgtcttcaacaataaaaactcataccgagtcagcgctaatggcgtgtcaaaccagctgatctgcgccgcgggttcattcaattcaaaatgtccaatacggatgacgggagaag                                                                                                              <  1:625232‑M2/272‑153 (MQ=255)                                                                                                                                 ttttttTCTGGTGGCGTTGGCAGCCTGTTTCGTACTGGCCATGTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCa                                                                                               <  1:262672/275‑1 (MQ=255)                                                                                                                                 ttttttACTGGTGGCGGTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTaa                                                                                                                                              >  2:43704/1‑228 (MQ=255)                                                                                                                                     ttACTGGTGGCGGTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACaaa                                                                                                                                          <  1:43705/228‑1 (MQ=255)                                                                                                                                       aCTGGTGGCGGTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAAGGCAAAGTAt                                                                                         >  1:434654/1‑275 (MQ=255)                                                                                                                                           gtggcggtggcAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACgttgctggcgggaccagacgcggcccggtgacttgagtaacgtcttcaacaataaaaactcataccgagtcagcgctaatggcgtgtcaaaccagctgatctgcgccgcgggttcattcaattcaaaatgtccaatacggatgacgggagacggcgtcgagaacttcttcacccg                                                                                       >  1:333467‑M2/1‑98 (MQ=255)                                                                                                                                           gtggcggtggcAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGttt                                                                                                                                                                                             >  1:654477/1‑171 (MQ=255)                                                                                                                                             ggcggtggcAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACgttgctggcgggaccagacgcggcccggtgacttgagtaacgtcttcaacaataaaaactcataccgagtcagcgctaatggcgtgtcaaaccagctgatctgccccgcgggttcattcaattcaaaatgtccaatacggaaaccgggagaaggcgtcgagaacttcttcacccgaa                                                                                     <  2:333461‑M2/273‑178 (MQ=255)                                                                                                                                               cggtggcAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACgttgctggcgggaccagacgcggcccggtgacttgagtaacgtcttcaacaataaaaactcataccgagtcagcgctaatggcgtgtcaaaccagctgatctgcgccgcgggttcattcaattcaaaatgtccaatacggatg                                                                                                                       >  1:328199‑M2/1‑94 (MQ=255)                                                                                                                                               cggtggcAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATc                                                                                                                                                                                         <  2:654463/171‑1 (MQ=255)                                                                                                                                                           ggTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTTATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTa                                                                                                                                               <  2:340829/201‑1 (MQ=255)                                                                                                                                                           ggTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTTATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTa                                                                                                                                               >  1:340835/1‑201 (MQ=255)                                                                                                                                                            gTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGCCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATAGTTCGATTCGGCAAATAAAg                                                                    >  1:362625/1‑275 (MQ=255)                                                                                                                                                                 tACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACCTCGCCCGCTTCGCTCCACTATCGGTGTCATTAACAAAGTgagc                                                                                                                                    >  2:486630/1‑206 (MQ=255)                                                                                                                                                                     ggCCATTTTTGTCNAAGAAGTTNAACCGGGCGTGCCAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATAGCGGTGGCATTAACAAAGTGCGCAATg                                                                                                                                <  1:486639/206‑1 (MQ=255)                                                                                                                                                                      gCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTATTCAGCTNCAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAAAAAAGTGCGCAATGAATCTCATGTATATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCAGTTgg                                                             >  1:611910/1‑272 (MQ=255)                                                                                                                                                                       ccATTTTGGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCNCGTCCCGATTTGCTCTCTGGGGAACCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATCGTTCGATTCGGAAAATAAAGCTGTTGGa                                                            <  1:534095/272‑1 (MQ=255)                                                                                                                                                                          tttttGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATc                                                                                                                                                                                         <  1:643546/144‑1 (MQ=255)                                                                                                                                                                          tttttGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATc                                                                                                                                                                                         <  1:148518/144‑1 (MQ=255)                                                                                                                                                                                                gggCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGAttt                                                                                                                                                                                                                                        >  2:241388/1‑75 (MQ=255)                                                                                                                                                                                                 ggCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTg                               >  1:161478/1‑275 (MQ=255)                                                                                                                                                                                                 ggCGTGCGAAGAGCAACGGAGGGGACGTAGATCGACACCGCAACGTTGCTGGCGGAGCTGgcg                                                                                                                                                                                                                                                   >  1:527680/1‑63 (MQ=255)                                                                                                                                                                                                  gCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTgg                                                                                                                                                                                                        >  1:371837/1‑105 (MQ=255)                                                                                                                                                                                                   cGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATggg                                                                                                                                                                                                               >  1:439307/1‑97 (MQ=255)                                                                                                                                                                                                    gTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGctc                                                                                                                                                                                                                                    <  1:241391/75‑1 (MQ=255)                                                                                                                                                                                                     tGCGAAGAGCAACGGAGGGGACGTAGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTc                                                                                                                                                                                                                                               <  2:527671/63‑1 (MQ=255)                                                                                                                                                                                                      gCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCa                                                                                                                                                                                                    <  2:371830/105‑1 (MQ=255)                                                                                                                                                                                                       cGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAAc                                                                                                                                                                                                           <  2:439300/97‑1 (MQ=255)                                                                                                                                                                                                       cGAAGAGCAAAGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCGAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGAta                                                                                                        >  1:718126/1‑195 (MQ=255)                                                                                                                                                                                                            agCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTcc                                                                                                                                                                                                                                              >  1:555975/1‑57 (MQ=255)                                                                                                                                                                                                              cAACGGAGGGGACGTTGATCGTCACCTCAACGTTGCTGTCGGAGCTGGCGCGTCCCTATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGt                  <  1:108029/275‑1 (MQ=255)                                                                                                                                                                                                                 cGGAGGGGTCTGTGATCGACCACACAACCTTGCTGGCGGGGTTGCCGCGGCCCGATTTGCTCTCCGGGGCCCCAGCGCCTGGGCAACTGGCGCAGGCGGTTAATCAGCTAAAACCTCTCCCGGTTCCCGCCAATATCGGTGCCATTAACATATTGCGCAATGAATATCATGTCTATATGACCGATGCTCAGGGCAACGGATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTACCGTTGCGTGGt               <  2:238998/275‑1 (MQ=255)                                                                                                                                                                                                                        gACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACt                                                                                                                                                                                                          >  2:423044/1‑81 (MQ=255)                                                                                                                                                                                                                         aCGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGtt                                                                                                                                                                                              >  1:165333/1‑92 (MQ=255)                                                                                                                                                                                                                         aCGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAata                                                                                                                            >  2:364341/1‑158 (MQ=255)                                                                                                                                                                                                                            ttGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGgcg                                                                                                                                                                                                      <  1:423051/81‑1 (MQ=255)                                                                                                                                                                                                                             tGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAAt                                                                                                                                                                                          <  2:165331/92‑1 (MQ=255)                                                                                                                                                                                                                             tGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCAt                                                                                                                        <  1:364348/158‑1 (MQ=255)                                                                                                                                                                                                                              gATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTATGGCTAACGTTGCGTGGTCAGTATGGTgagc  >  1:15060/1‑275 (MQ=255)                                                                                                                                                                                                                                       cGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAg                                                                                                                                                                                       >  2:365208/1‑85 (MQ=255)                                                                                                                                                                                                                                         cAACGTTGCTGGCGGAGCTGGCGCGTCCCGAATTGCTCTCTGGGGACCCAACGCCTGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCCCCCGTTTCGCGCCAATATCGGCGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATg                                      >  1:126474/1‑228 (MQ=255)                                                                                                                                                                                                                                           aCGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTac                                                                                                                                                                                   <  1:365215/85‑1 (MQ=255)                                                                                                                                                                                                                                            cGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAata                                                                                                                            >  2:212447/1‑139 (MQ=255)                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                                     CATTAAAACGCTGCGTGCCAAGCTGCGCGCCATCAACCCCGATCTTTCACCGATTAATACTCATCGCGGCATGGGATATAGCCTGAGGGGCCTGTAATGCGTATCGGCATGCGGTTGTTGCTGGGCTATTTTTTACTGGTGGCGGTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGC  >  CP009273/4626417‑4626912

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.