New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 158043	45 (1.120)	4 (0.110)	3/294	NT	8.0%	coding (476/531 nt)	ligT	2'‑5' RNA ligase
	?	CP009273	= 158600	49 (1.290)					coding (9/2430 nt)	hrpB	putative ATP‑dependent helicase

TGGGTATTTCCGTTTGGTGTTGTCTGAAGTCGAATACCAGACGGTATCGCCAGGCGTTGCACAACCGGTCATCGCACCCGTATTCGGGCAGTGTAGCGTTAATTCGCGACCATCGGGTGTGATCACATCGGCTAAAAAACGTTTGTAACGCTGAATTAGCGTCGCGCGCTGTAGAGGGGGAGAAAATTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGTAGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATACGACCAGTTAAAACCTGGCGGCGGGATTGTCACCGCCTCGCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGCCGCGTGGCGGCTGACGCATCCCTAACCACACCACACGCGAACGCAGCCATTGTCCGGCGTCATCAAG  >  CP009273/157782‑158293                                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                           tgGGTATTTCCGTTTGGTGTTGTCTGAAGTCGAATACCAGACTGTATCTCCAGGCGTTGCACAACCGGTCATCGCACCCGTATTCGGGCAGTGTAGCGTTAATTCGCGACCATCGGGTGGGATCACATCGGCTAAAAAACGTTTGTAACGCTGAATTAGCGTCGCGCGCTGTAGAGGGGGAGAAAATTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCTCAGCGGTTTAGCGGCGTGTAGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTa                                                                                                                                                                                                                                               <  1:178928/275‑1 (MQ=255)  gggTATGTCCGTTTGGTGTTGTCTGAAGTCGAATACCAGACGGTATCGCCAGGCGTTGCACAACCGGTCATCGCACCCGTATGCGGGCAGTGTAGCGTTGATTCGCGACCATCGGGTGTGAGCACATCGGCTAAAAAACGGTTGTAAAGCTGAATTAGCGTCGCGCGCTGTAGAGGGGGAGAAAATTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGTAGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTaa                                                                                                                                                                                                                                              <  1:1022/275‑1 (MQ=255)       tttCCGTTTGGTGTTGTCTGAAGTCGAATACCAGACGGTATCGCCAGGCGTTGCACAACCGGTCATCGCACCCGTATTCGGGCAGTGTAGCGTTAATTCGCGACCATCGGGTGTGATCACATCGGCTAAAAAACGTTTGTAACGCTGAATTAGCGTCGCGCGCTGTAGAGGGGGAGAAAATTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGTAGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAggg                                                                                                                                                                                                                                          >  1:104907/1‑274 (MQ=255)                  aaagatCTGAAGGCGAATACCAGACGGTATCGCCAGGGGGTGCACAACCGGTCAGCGTACCCGTATTCGGACAGTGTAGCGTTAATTCGCGACGATCGGGTGTGATCACATCGGCTAAAAAACGTTTGTAACGCTGAATTAGCGTCGCGCGCTGTAGAGGGGGAGAAAATTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGTAGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCa                                                                                                                                                                                                                              <  2:706981/270‑1 (MQ=255)                                 aaTACCAGACGGTATCGCCAGGCGTTGCACAACCGGTCATCGCACCCGTATTCGGGCAGTGTAGCGTTAATTCGCGACCATCGGGTGTGATCACATCGGCTAAAAAACGTTTGTAACGCTGAATTAGCGTCGCGCGCTGTAGAGGGGGAGAACATTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGATTTAGCGGCGTGTAGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTGACATCCGTCACCGCATCCGAcctg                                                                                                                                                                                                                >  1:706995/1‑272 (MQ=255)                                   tACGAGACGGTATCGCCAGGCGTTGCACATCCGGTCATCGCACCCGTATTCGGGCAGTGTAGCGTTAATTCGCGACCATCGGGTGTGATCACATCGGATAAAAAACGTTTGTAACGCTGAATTAGCGTCGCGCGCTGTAGAGGGGGAGAAAATTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGTAGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATACGACCAGTTa                                                                                                                                                                                                             <  1:372278/275‑1 (MQ=255)                                                      gCGTTGCACAACCGGTCATCGCACCCGTATTCGGGCAGTGTAGCGTTAATTCGCGACCATCGGGTGTGATCACATCGGCTAAAAAACGTTTGTAACGCTGAATTAGCGTCGCGCGCTGTAGAGGGGGAGAAAATTCCATTGCGACAGTCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGTAGCGTGTGCGTCCACGGGCAAcgacgacacaaaacgctccagagggttaacattcttcgcgccacattgtagcatcgcggtaattca                                                                                                                                                                                          >  1:641278‑M1/1‑209 (MQ=255)                                                          tGCACAACCGGTCATCGCATCCGTATTCGGGCAGTGTAGCGTTAATTCGCGACCATCGGGTGTGATCACATCGGCTAAAAAACGTTTGTAACGCTGAATTAGCGTCGCGCGCTGTAGAGGGGAAGAAAATTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGTAGCGTGTGCGTCCACGGGCAAACgaggag                                                                                                                                                                                                                                                    >  1:598682/1‑213 (MQ=255)                                                              caACCGGTCATCGCACCCGTATTCGGGCAGTGTAGCGTTAATTCGCGACCATCGGGTGTGATCACATCGGCTAAAAAACGTTTGTAACGCTGAATTAGCGTCGCGCGCTGTAGAGGGGAAGAAAATTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGTAGCGTGTGCGTCCACGGGCAAACGAGGAGGCGt                                                                                                                                                                                                                                                <  2:598669/213‑1 (MQ=255)                                                                                gTATTCGGGCAGTGTAGCGTTAATTCGCGACCATCGGGTGTGATCACATCGGCTAAAAAACGTTTGTAACGCTGAATTAGCGTCGCGCGCTGTAGAGGGGGAGAAAATTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGTAGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATACGACCAGTTAAAACCTGGCGGCGGGATAGTCACCGCCTCGCTGGCGTCGCGCAAt                                                                                                                                                                <  1:428569/275‑1 (MQ=255)                                                                                          aGTGTAGCGTTAATTCGCGACCATCGGGTGTGATCACATCGGCTAAAAAACGTTTGTAACGCTGAATTAGCGTCGCGCGCTGTAGAGGGGGAGAAAATTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGTAGCGTGTGCGTCCACGGGCAAcgacgacacaaaacgctccagagggttaacattcttcgcgccacattgtagcatcgcggtaattcataaccgagtgcctcacatgtctgaaccgcaacgtct                                                                                                                                                      >  1:328049‑M1/1‑173 (MQ=255)                                                                                               aGCATTAATTCGCGACCATCGGTGGTGATCACATCGGCTAACAAACGTTTGTAACGCTGAATTAGCGTCGCGCGCTGTAGAGGGGGAGAAAATTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGTAGCGTGTGCGTCCACGGGCAAcgacgacacaaaacgctccagagggttaacattcttcgcgccacattgtagcatcgcggtaattcataaccgagtgcctcacatgtctgaaccgcaacgtctgttct                                                                                                                                                 <  2:328043‑M1/275‑108 (MQ=255)                                                                                                gcgtgtattcgagACCATCGGGTGGGATCACATCGGCGAAAAAACGTTTGTAACGCTGAATTAGCGTCGCGCGCTGTAGAGGGGGAGAAAATTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGTAGCGTGTGCGTCCACGGGCAAcgacgacacaaaacgctccagagggttaacattcttcgcgccacattgtagcatcgcggtaattcataaccgagtgcctcacatgtctgaaccgcaacgtctgttct                                                                                                                                                 <  2:641264‑M1/268‑108 (MQ=255)                                                                                                           cgACCATCGGGTGTGATCACATCGGCTAAAAAACGTTTGTAACGCTGAATTAGCGTCGCGCGCTGTAGAGGGGGAGAAAATTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGTAGCGTGTGCGTCCAGGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATACGACCAGTTAAAAc                                                                                                                                                                                                         >  1:535573/1‑207 (MQ=255)                                                                                                           cgACCATCGGGTGTGATCACATCGGCTAAAAAACGTTTGTAACGCTGAATTAGCGTCGCGCGCTGTAGAGGGGGAGAAAATTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGTAGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCAt                                                                                                                                                                                                                        >  2:694819/1‑192 (MQ=255)                                                                                                            gACCATCGGGTGTGTTCAAATCGGCTAAAATACTTTTGTAACTCTGAATTAGCGTGGCGCGCTGTAGAGGGGGAGAAAATTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGTAGAGTGTGCGTCCACGGGAAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATACGACCAGTTAAAACCTGGCGGCGGGATTGTCACCGCCTCGCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGa                                                                                                                                     <  1:61384/274‑1 (MQ=255)                                                                                                             aCCATCGGGTGTGATCACATCGGCTAAAAAACGTTTGTAACGCTGAATTAGCGTCGCGCGCTGTAGAGGGGGAGAAAATTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGTAGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCNCCGCATACNACCAGTTAAAACCTGGCGGCGGGATTGTCACCGCATCGCTGGCGTCGCGCAATAAGGAAATAAATGGATGAAACGGACGAt                                                                                                                                    >  1:495522/1‑274 (MQ=255)                                                                                                               cATCGGGTGTGATCACATCGGCTAAAAAACGTTTGTAACGCTGAATTAGCGTCGCGCGCTGTAGAGGGGGAGAAAATTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGTAGCGTGTGCGTCCAGGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATACGACCAGTTAAAACCTgg                                                                                                                                                                                                     <  2:535563/207‑1 (MQ=255)                                                                                                               cATCGGGTGTGATCACATCGGCTAAAAAACGTTTGTAACGCTGAATTAGCGTCGCGCGCTGTAGAGGGGGAGAAAATTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGTAGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATACGa                                                                                                                                                                                                                    <  1:694833/192‑1 (MQ=255)                                                                                                                                  ggCTAAAAAACGTTTGTAACGCTGAATTAGCGTCGCGCGCTGTAGAGGGGGAGAAAATTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGTAGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATACGACCAGTTAAAACCTGGCGGCGGGATTGTCACCGCATCGCTGGCGCCGCGAAACAAGGAAATATGGGGATGGAACGGCAGATTGCTGTGAAANAAAACGccga                                                                                                               >  2:62940/1‑271 (MQ=255)                                                                                                                                  ggCTAAAAAACGTTTGTAACGCTGAATTAGCGTCGCGCGCTGTAGAGGGGGAGAAAATTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGTAGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATACGACCAGGTAAAACCTGGCGGCCGGATTGTCACCGCCGCGCTGGCGTCGCGCAAAAAGGGAAGAGGTGGATGAAACGACCGATTGCTTTGCAaacaacacccgcg                                                                                                              >  2:94078/1‑268 (MQ=255)                                                                                                                                                     cGCTGAATTAGCGTCTCGCGCTGTAGAGGGGGAGAAAATTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGTAGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATACGACCAGTTAAAGCCTGGCGGCGGGATTGTCACCGCCTCGCTGGCGTCGCGCAATAAGGt                                                                                                                                                           <  1:709425/211‑1 (MQ=255)                                                                                                                                                                                    gagaAAATTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGTAGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAg                                                                                                                                                                                                                                            >  2:108153/1‑99 (MQ=255)                                                                                                                                                                                    gagaAAATTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGTAGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATACGACCAGTTAAAACCTGGCGGCGGGATTGTCACCGCCTCGCTGGCGTCGCGCAATAAGGTAAGATGTGGGTGAAACGGACGATTGCTTTGAAAACAACACATGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCCGGCTGAAGCCGCGCggc                                                             >  2:706898/1‑274 (MQ=255)                                                                                                                                                                                      gaAAATTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGTAGCGTGTGCGTCCACGGGCAAACgaggag                                                                                                                                                                                                                                                    >  1:396945/1‑89 (MQ=255)                                                                                                                                                                                        aaaTTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGTAGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTg                                                                                                                                                                                                                                        <  1:108154/99‑1 (MQ=255)                                                                                                                                                                                        aaaTTCCAATGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGTAGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATACGACCAGTTAAAACCTGGCGGCGGGATTGTCACCGCCTCGCTGGCGTCGCGCAATAAGGTAATATGTTGa                                                                                                                                                 <  1:391759/186‑1 (MQ=255)                                                                                                                                                                                          aTTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGTAGCGTGTGCGTCCACGGGCAAACGAGGAGGCGt                                                                                                                                                                                                                                                <  2:396938/89‑1 (MQ=255)                                                                                                                                                                                           ttCCATTGCGTCATTCCTTGTTATTGCGTTACCGCCCAGCGTTTGAGCGGCGTGTAGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATACGACCAGTTAAAACCTGGCGGCGGGATTGTCACCGCCTCGCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGCCGCGTGGCGGCTGACg                                                     <  1:67863/275‑1 (MQ=255)                                                                                                                                                                                           ttCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGTAGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATAc                                                                                                                                                                                                                      >  2:255580/1‑114 (MQ=255)                                                                                                                                                                                           ttCCATTGCGACAATCCTTGTTATTGCGAGAGCGCCCAGCGTTTTAGCGGCGTGTAGCGTGTGCGTCCACGGGCAAACg                                                                                                                                                                                                                                                         >  1:522976/1‑79 (MQ=255)                                                                                                                                                                                            tCCTTTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGTAGCGTGTGCGTCCACGGGCAAACGAGTAAGCGTAAAGGGTGAGCTCCGTCACCTCATACGACCAGTTAAAACCTGGCGGCGGGATTGTCACCGCCTCGCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTTAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGCCGCGTGGCGGCTGACg                                                     <  1:372168/274‑1 (MQ=255)                                                                                                                                                                                               aTTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGTAGCGTGTGCGTCCACGGGCAAACgagga                                                                                                                                                                                                                                                     <  2:522967/79‑1 (MQ=255)                                                                                                                                                                                               aTTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGTAGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATACGAcc                                                                                                                                                                                                                  <  1:255583/114‑1 (MQ=255)                                                                                                                                                                                                 tGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGTAGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATACGACCAGTTAAAACCTggcggc                                                                                                                                                                                                 >  2:509025/1‑129 (MQ=255)                                                                                                                                                                                                     aCAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGTAGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATACGACCAGTTAAAACCTGGCGGCGGGa                                                                                                                                                                                             <  1:509034/129‑1 (MQ=255)                                                                                                                                                                                                                   tGCGTTAGCGCCCAGCGTTTTAGCGGCGTGTAGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATACGACCAGTTAAAACCTGGCGGCGGGATTGTCACCGCCTCGCTGGCGTCgcgc                                                                                                                                                                   >  2:618197/1‑141 (MQ=255)                                                                                                                                                                                                                       ttAGCGCCCAGCGTTTTAGCGGCGTGTAGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATACGACCAGTTAAAACCTGGCGGCGGGATTGTCACCGCCTCGCTGGCGTCGCGCAATa                                                                                                                                                               <  1:618210/141‑1 (MQ=255)                                                                                                                                                                                                                         aGCGCCCAGCGTTTTAGCGGCGTGTAGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCAt                                                                                                                                                                                                                        >  2:638551/1‑82 (MQ=255)                                                                                                                                                                                                                             cccAGCGTTTTAGCGGCGTGTAGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATACGa                                                                                                                                                                                                                    <  1:638565/82‑1 (MQ=255)                                                                                                                                                                                                                                      ttAGCGGCGTGTAGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATACGACCAGTTAAAACCTGGCGGCGGGATTGTCACCGCCTCGCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGCCGCGTGGCGGCTGACGCATCCCTAACCACACCACACGCGAACGCAGCCATTGTCCGGc           <  1:62941/274‑1 (MQ=255)                                                                                                                                                                                                                                      ttAGCGGCGTGTAGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATACGACCAGTTAAAACCTGGCGGCGGGATTGTCACCGCCTCGCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGCCGCGTGGCGGCTGACGCATCCCTAACCACACCACACGCGAACGCAGCCATTGTCCGGc           <  1:700702/274‑1 (MQ=255)                                                                                                                                                                                                                                              gtgtAGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATACGGCCAGTTAAAACCTGGCGGCGGGATTGTCACCGCCACGCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGCCGCGTGGCGGCTGACGCATCCCTAACCACACCCCACGCGAACCCAGCAATAGCCCGGCGTCATCaa   >  1:94657/1‑274 (MQ=255)                                                                                                                                                                                                                                              gtgtAGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATACGACCAGTTAAAACCTGGCGGCGGGATTGTCACCGCCTCGCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGNGCATATTCGCCAGCTGGATTAAGCCGCGTGGCGGCTGACGCATCCCTAACCACACCACACGCGAACGCAGCCATTGTCCGGCGTCAGCAAg  >  1:536196/1‑275 (MQ=255)                                                                                                                                                                                                                                               tgtAGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAg                                                                                                                                                                                                                                            >  1:141036/1‑40 (MQ=255)                                                                                                                                                                                                                                                   gCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTg                                                                                                                                                                                                                                        <  2:141035/40‑1 (MQ=255)                                                                                                                                                                                                                                                      tgtgCGTCCACGGGCAAACGAGGCGGCGTAAAGGGTGAACTCCGTCACCGCATCCGACCAGTCAAAACCTGGCGGCGGGATTGTCACCGCCTCGCTGGCGTCGAGCACTAAGGTAATATGTGGATGAAACGGACgct                                                                                                                                    >  2:150972/1‑135 (MQ=255)                                                                                                                                                                                                                                                        tgCGGCCACGGGCAAACGAGGAGGCGTAAATGGTGAACTCCGTCACCGCATACGACCACTTAAAACCGGGCGGCGGGATGGTCACCGCCTCGCTGGCGTCGCGCCACAATGTAATATGTGGATGAAACGGACGATTGc                                                                                                                                 >  2:188869/1‑138 (MQ=255)                                                                                                                                                                                                                                                          cGTCCACGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATACGACCAGTTAAAACCTGGCGGCGGGATTGTCACCGCCTCGATGGCGTCGCGCAATAAGGTAATAGGTGGATGAAACGGACGATTGCt                                                                                                                                <  1:150973/137‑1 (MQ=255)                                                                                                                                                                                                                                                            tCCACGGGCAAACGAGGGGGCGTAAAGGGTGAACTCCGTCACCGCATAAGACCAGTTAAAACATGGCGGCGGGAGTGGCACCGCCTCGCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTg                                                                                                                             <  1:188871/138‑1 (MQ=255)                                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                           TGGGTATTTCCGTTTGGTGTTGTCTGAAGTCGAATACCAGACGGTATCGCCAGGCGTTGCACAACCGGTCATCGCACCCGTATTCGGGCAGTGTAGCGTTAATTCGCGACCATCGGGTGTGATCACATCGGCTAAAAAACGTTTGTAACGCTGAATTAGCGTCGCGCGCTGTAGAGGGGGAGAAAATTCCATTGCGACAATCCTTGTTATTGCGTTAGCGCCCAGCGTTTTAGCGGCGTGTAGCGTGTGCGTCCACGGGCAAACGAGGAGGCGTAAAGGGTGAACTCCGTCACCGCATACGACCAGTTAAAACCTGGCGGCGGGATTGTCACCGCCTCGCTGGCGTCGCGCAATAAGGTAATATGTGGATGAAACGGACGATTGCTTTGAAAACAACCGCTGCGGGCAGCCTGTGAACGGAGCATATTCGCCAGCTGGATTAAGCCGCGTGGCGGCTGACGCATCCCTAACCACACCACACGCGAACGCAGCCATTGTCCGGCGTCATCAAG  >  CP009273/157782‑158293

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.