New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 197680	40 (1.000)	5 (0.130)	4/292	NT	9.4%	coding (223/1026 nt)	lpxD	UDP‑3‑O‑(3‑hydroxymyristoyl)‑glucosamine N‑acyltransferase
	?	CP009273	= 197761	59 (1.560)					coding (304/1026 nt)	lpxD	UDP‑3‑O‑(3‑hydroxymyristoyl)‑glucosamine N‑acyltransferase

TAAGTAATGCCTTCAATTCGACTGGCTGATTTAGCGCAGCAGTTGGATGCAGAACTACACGGTGATGGCGATATCGTCATCACCGGCGTTGCGTCCATGCAATCTGCACAAACAGGTCACATTACGTTCATGGTTAACCCAAAATACCGTGAGCATTTAGGCTTGTGCCAGGCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTGGGTAACAACGTATCGATTGGCGCTAACGCGGTGATTGAGTCCGGCGTTGAACTGGGCGATAACGTGATTATCGGTGCCGGTTGCTTCGTAGGTAAAAACAGCAAAATCGGTGCAGGTTCGCGTCTCTGGGCGAACGTAACCATTTACCATGAGATCCAG  >  CP009273/197452‑197952                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                                                 tcaggaaggacggcAATTTGACTCGGTTAGTTAGCGCAGCAGTGGGCGGCAGAACTACACGTGGATGGCGATATCGTCATCACCGGCGGTGCGTCCATGCAATCTGCACAAACAGGTCACATTACGTTCATGGTTAACCCAAAATACCGTGAGCATTTAGGCTTGTGCCAGGCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTGTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAAtttt                                                                                                                                                                                                                                    <  2:725691/262‑1 (MQ=255)     tAATGCCTTCAATTCGACTGGCTGATTTAGCGCAGCAGTTGGATGCAGAACTACACGGTGATGGCGATATCGTCATCACCGGCGTTGCGTCCATGCAATCTGCACAAACAGGTCACATTACGTTCATGGTTAACCCAAAATACCGTGAGCATTTAGGCTTGTGCCAGGCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAg                                                                                                                                                                                                                                                                               >  1:33345/1‑228 (MQ=255)     tAATGCCTTCAATTCGACTGGCTGATTTAGCGCAGCAGTTGGATGCAGAACTACACGGTGATGGCGATATCGTCATCACCGGCGTTGCGTCCATGCAATCTGCACAAACAGGTCACATTACGTTCATGGTTAACCCAAAATACCGTAAGCATGTAGGCTTGTGCCAGCCGTCCGCGGTTGTCATGACCCAGGACGATCTTCATTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTAACTGACTTACGCGCGCATGGCGCAAATATTAgc                                                                                                                                                                                                                                 >  1:661283/1‑273 (MQ=255)         gCCTTCAATTCGACTGGCTGATTTAGCGCAGCAGTTGGATGCAGAACTACACGGTGATGGCGATATCGTCATCACCGGCGTTGCGTCCATGCAATCTGCACAAACAGGTCACATTACGTTCATGGTTAACCCAAAATACCGTGAGCATTTAGGCTTGTGCCAGGCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTgaa                                                                                                                                                                                                                                                                           <  2:33344/228‑1 (MQ=255)                         ggtGATTTAGATGAGCAGTTGTATGCATAACTATCGGGTGATGTCGATAGCGTCATCACCGGCGTTGCGTCCATGCAATCTGCACAAACAGGTCACAGTACGTTCATGGTTAACCCAAAATACCGTGAGCATTTAGGCTTGTGCCAGGCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCa                                                                                                                                                                                                            <  1:380776/273‑1 (MQ=255)                            gATTTCGCCTAGCAGTTGGATGCCGCACTACTCCGTGCTGGCTATATCGTTCTCACCGGCGTTGCGTCCATGCCATCTGCACAAACATGTCACATTACGTTCATGGTTAACCCAAACGACCTTGAGGATGTAGGCTGGGGCCAGGCGTCCGCGGTGGTCATGACCCAGGGCGATCTTCCTTTCGCGAAATGTGCCGCACTGGgtgcaatggtctgcgcaggctgcggcgtggtatctaaaatttgcgccatgcgcgcgtaagtcaggtagggat                                                                                                                                                                                                          <  2:178887‑M1/274‑73 (MQ=255)                                   cgcAGCAGTTGGATGCGGAACTACACGGCGATGGCGATATCGTCGTCACCGGCGTTGCGTCCATGCAATCTGCACAAACAGGTCACATTACGTTCATGGTTAACCCAAAATACCGTGAGCATTTAGGCTTGTGCCAGGCGTCCGCGGTTGTCATGACCCCGGACGATCTTCCTTTCGCGAAAANTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTga                                                                                                                                                                                                   >  1:549970/1‑273 (MQ=255)                                       gcagTTGGATGCAGAACTACACGGTGATGGCGATATCGTCATCACCGGCGTTGCGTCCATGCAATCTGCACAAACAGGTCACATTACGTTCATGGTTAACCCAAAATACCGTGAGCATCTAGGATTGTCCCAGGCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAATGTGCCGCACTGGgtgcaatgttctgcgcgggctgcggcgtggtatctaaaatttgcgccatgcgcgcgtaagtcaggtagggaagcatcactaccc                                                                                                                                                                                              >  1:178889‑M1/1‑191 (MQ=255)                                                               tGATGGCGATATCGTCATCACCGGCGTTGCGTCCATGCAATCTGCACAAACAGGTCACATTACGTTCATGGTTAACCCAAAATACCGTGAGCATTTAGGCTTGTGCCAGGCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCcg                                                                                                                                                                                                                >  1:550105/1‑233 (MQ=255)                                                                  tGGCAATACCGTCNCCCCCGGCGTTGCGTCGATGCAATCTGCACCAACGGGTCACATTACGTTACTGGTTACCCCAACATACCGTGTGCATTTAGGCTTGTGCCAGGCGTCCGCGGTTGTCATGACCCACGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTTCAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATGCCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAg                                                                                                                                                                    <  2:539242/274‑1 (MQ=255)                                                                   ggCGATATCGTCATCACCGGCGTTGCGTCCATGCAATCTGCACAAACAGGTCACATTACGTTCATGGTTAACCCAAAATACCGTGAGCATTTAGGCTTGTGCCAGGCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCa                                                                                                                                                                                                            <  2:550094/233‑1 (MQ=255)                                                                    gCGATAGCGTCATCACCGGCGTTGCGTCCATGCAATCTGCACAAGCAGGTCACATTACGTTCATGGTTAACCCAAAATACCGTGAGCATTTAGGCTTGTGCCAGGCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGANTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCt                                                                                                                                                                  >  1:539252/1‑274 (MQ=255)                                                                              catcaCCGGCGTTGCGTCCATGCAATCTGCACAAACAGGTCACATTACGTTCATGGTTAACCCAAAATACCGTGAGCATTTAGGCTTGTGCCAGGCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCCCTGGgtgcaatgttctgcgcgggctgcggagtggtatctaaaatttgcgccatgcgcgcgtaagtcaggtag                                                                                                                                                                                                              >  1:418203‑M1/1‑152 (MQ=255)                                                                                                         tGCACAAACAGGTCACATTACGTTCATGGTTAACCCAAAATACCGTGAGCATTTAGGCTTGTGCCAGGCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCCGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCCCAGAACATTGCTCCCCGTCCGGCAACCTACGCCACGGCGAAGCTGGGTAACACCGTAACGACTGGCCCTAACGCgggcgtt                                                                                                                             >  2:707358/1‑269 (MQ=255)                                                                                                           cacaAACAGGTCACATTACGTTCATGGTTAACCCAAAATACCGTGAGCATTTAGGCTTGTGCCAGGCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGgtgcaatgttctgcgcgggctgcggcgtggtatctaaaatttgcgccatgcgcgcgtaagtcaggtag                                                                                                                                                                                                              >  2:646628‑M1/1‑123 (MQ=255)                                                                                                             ctaaCAGGTCCATTTACGTTCTTGGTTACCCCAAACTACCGTGAGCATTTCGGCTTGTGCCAGTCGTCCGCGGTTGGCATGACCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAATAATCCCTACCTGACTTACGCGCGCATGGCGCAAATGTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTGGGTAACAACGTATCGATTGGCGCTAACGCGGTGATTGAGTc                                                                                                                        <  1:326922/273‑1 (MQ=255)                                                                                                               aaCAGGTCACATTACGTTCATGGTTAACCCAAAATACCTTGAGCGTTTAGGCTTGTGCCAGGCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGgtgcaatgttctgcgcgggctgcggcgtggtatctaaaatttgcgccatgcgcgcgtaagtcaggtagggat                                                                                                                                                                                                          <  1:646642‑M1/191‑73 (MQ=255)                                                                                                                aCAGGTCACATTACGTTCATGGTTAACCCAAAATACCGTGAGCATTTAGGCTTGTGCCAGGCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGAGGTGATCGACGCCACCCCGAAGCTGGGGAACAACGCAACGATNTGTGCCAActcgcgtatttaattct                                                                                                                      >  2:493320/1‑261 (MQ=255)                                                                                                                    gTCACATTACGTTCATGGTTAACCCAAAATACCGTGAGCATTTAGGCTTGTGCCAGGCGTCCGCNGTTGTCATNACCCAGGACGATATTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGACGCTGGGTCACAACGTATCGATTGGCGCTAAcgcg                                                                                                                                   <  1:493329/257‑1 (MQ=255)                                                                                                                            aCGTTCATGGTTAACCCAAAATACCGTGAGCATTTAGGCTTGTGCCAGGCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCa                                                                                                                                                                                                  >  2:200577/1‑186 (MQ=255)                                                                                                                                tCATGGTTAACCCAAAATACCGTGAGCATTTAGGCTTGTGCCAGGCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACcca                                                                                                                                                                                              >  1:200579‑M2/1‑183 (MQ=255)                                                                                                                                              aaaTACCGTGAGCATTTAGGCTTGTGCCAGGCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCaaa                                                                                                                                                                                                                                        >  1:548379/1‑130 (MQ=255)                                                                                                                                              aaaTACCGTGAGCATTTAGGCTTGTGCCAGGCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGc                                                                                                                                                                   >  2:604017/1‑199 (MQ=255)                                                                                                                                                  gccGTGAGCATTTAGGCTTGTGCCAGGCGGCCGGGGTTGTCATGACCAGGGACGAGCTTCCGTTCGCGAAAAGTGCCGCACTGGGAGTGAAGAATCCCTACATGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGCACATTGCACCCAGTGCGGTGGTCGACGCGACGGCGAAGCTggg                                                                                                                                                               <  1:607079/198‑1 (MQ=255)                                                                                                                                                  aCCGTGAGCATTTAGGCTTGTGCCAGGCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAAtttt                                                                                                                                                                                                                                    <  2:548368/130‑1 (MQ=255)                                                                                                                                                  aCCGTGAGCATTTAGGCTTGTGCCAGGCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTggg                                                                                                                                                               <  1:604030/199‑1 (MQ=255)                                                                                                                                                    cGTGAGCATTTAGGCTTGTGCCAGGCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTGGGTAACAACGTATCGATTGGCGCTAACGCGGt                                                                                                                                 >  2:606143/1‑227 (MQ=255)                                                                                                                                                        aGCATTTAGGCTTGTGCCAGGCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTGGGTAACAACGTATCGATTGGCGCTAACGCGGTGAtt                                                                                                                             <  1:606156/227‑1 (MQ=255)                                                                                                                                                                    tgtgCCAGGCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAg                                                                                                                                                                                                                                                                               >  1:403663/1‑69 (MQ=255)                                                                                                                                                                     gtgCCAGGCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATg                                                                                                                                                                                                                                               >  1:17628/1‑100 (MQ=255)                                                                                                                                                                     gtgCCAGGCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTGGGTAACAACGTATCGATTGGCGCTaa                                                                                                                                       >  1:320597/1‑204 (MQ=255)                                                                                                                                                                     gtgCCAGGCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTGGGTAACAACGTATCGATTGGCGCTAACGCGGTGATTGAGTCCGGCGTTGAACTGGGCGATAACGTGATTATCGGTGACGGTTGCTTCGTAGGGaaaa                                                                >  1:366038/1‑275 (MQ=255)                                                                                                                                                                      tgCCAGGCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGc                                                                                                                                                                        >  2:155631/1‑170 (MQ=255)                                                                                                                                                                        ccAGGCGTCCGCGGTTGTCATGACCCAGGACGATATTCCTTTCGCGAAAAGTGCCGCACTGGTAGTgaa                                                                                                                                                                                                                                                                           <  2:403656/69‑1 (MQ=255)                                                                                                                                                                         cAGGCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGgcgc                                                                                                                                                                                                                                           <  2:17628/100‑1 (MQ=255)                                                                                                                                                                         cAGGCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTGGGTAACAACGTATCGATTGGCGCTAAcgcg                                                                                                                                   <  2:320591/204‑1 (MQ=255)                                                                                                                                                                          aGGCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAg                                                                                                                                                                    <  1:155633/170‑1 (MQ=255)                                                                                                                                                                           ggCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGCTGATCGACGCGACGGCGAAGCTGGGGAACAACGTATCGATTGGCGCTAACGCGGTGATGGAg                                                                                                                          >  2:704672/1‑211 (MQ=255)                                                                                                                                                                           ggCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAAACTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACCTTGCACACAGTGCGGTGACCGACGCGACGGc                                                                                                                                                                        >  1:708786/1‑165 (MQ=255)                                                                                                                                                                               tCCGCGGTTGTCATGTCCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGATGCTGGGTAACAACGTATCGATTGGCGCTAACGCGGTGATTGAGTCCg                                                                                                                      <  1:704686/211‑1 (MQ=255)                                                                                                                                                                                              agagacagcGATATGCCGTTCGCGAAAAGTGCCGCACCGGTAGTAAAGAATCCCTTCCTGACTTACGCGCGCATGGCGCAAATTTTCGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATTGGCGCGACGGCGAAGCTGGGTAACAACGTATCGATTGGCGCTAACGCGGTGATTGAGTCCGGCGTTGAACTGGGCGATAACGTGATTATCGGTGCCGGTTGCTTCGTAGGTAAAAACAGCAAAATCGGTGCAGGTTcgc                                        <  2:133546/266‑1 (MQ=255)                                                                                                                                                                                                  aGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCt                                                                                                                                                                  >  2:297068/1‑148 (MQ=255)                                                                                                                                                                                                   ggACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCCAGGTAACAACGNATCGATTGGCGCTAACGCGGTGATTGAGTCCGGCGGTGAACTGGGCGATAAAGTGATTATAGGGTCCGGTTGCTTCGTAGGTAAAAACAGCAAAATAGGTGCAGGGTAGCGTctct                                  >  1:663129/1‑275 (MQ=255)                                                                                                                                                                                                      cGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTGGGt                                                                                                                                                              <  1:297073/148‑1 (MQ=255)                                                                                                                                                                                                         tCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTggg                                                                                                                                                               >  2:619721/1‑144 (MQ=255)                                                                                                                                                                                                             ccTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTGGGTaac                                                                                                                                                           <  1:619734/144‑1 (MQ=255)                                                                                                                                                                                                                 tCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCCTGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTGGGTAACAACGTATCGATTGGCGCTAACGCGGTGATTGAGTCCGGCGTTGAACTGGGCGATAACGTGATTATCGGTGCCGGTTGCTTCGTAGGTAAAAACCGCAAAATCGGTGCAGGGTCGCGTCACTGGGCgctggcactt                    >  1:133547/1‑266 (MQ=255)                                                                                                                                                                                                                   gcgAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCACGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTGGGTAACAAGGTATCGATTGGTGCTAACGCGGTGATTGAGTCCGGCGTTGAACTGGGCGATAACGTGATTATCGGTGCCGGTTGCTTCGTAGGTAAAAACAGCAAAATAGGTACCGGTTCGCGTCTCTGGACGAAAGTAACAAt                  >  1:697987/1‑275 (MQ=255)                                                                                                                                                                                                                                   tGGgtgcaatgttctgcgcgggctgcggcgtggtatctaaaatttgcgccatgcgcgcgtaagtcaggtagggattcttcactaccagtgcggcacttttcgcgaaaggaagatcgtcctgggtcatgacaaccgcggacgcctggcacaagcctaaatgctcacggtattttgggttaaccatga                                                                                           >  1:200579‑M1/1‑3 (MQ=255)                                                                                                                                                                                                                                   gggtAGTGATGCTTCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACccagtgcggcacatttcgcgaaaggaagatcgtcctgggtcatgacaaccgcggacgcctgggacaatcctagatgctcacggtattttgggttaaccatgaacgtaatgtgacctgtttgtgcagattgcatggacgcaacgccggtgatgacgatatcgccatcaccgtgtagttctgcatccaactgc  >  1:178889‑M2/2‑84 (MQ=255)                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                                                 TAAGTAATGCCTTCAATTCGACTGGCTGATTTAGCGCAGCAGTTGGATGCAGAACTACACGGTGATGGCGATATCGTCATCACCGGCGTTGCGTCCATGCAATCTGCACAAACAGGTCACATTACGTTCATGGTTAACCCAAAATACCGTGAGCATTTAGGCTTGTGCCAGGCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTGGGTAACAACGTATCGATTGGCGCTAACGCGGTGATTGAGTCCGGCGTTGAACTGGGCGATAACGTGATTATCGGTGCCGGTTGCTTCGTAGGTAAAAACAGCAAAATCGGTGCAGGTTCGCGTCTCTGGGCGAACGTAACCATTTACCATGAGATCCAG  >  CP009273/197452‑197952

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.