New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 197680	40 (1.000)	5 (0.130)	4/292	NT	9.4%	coding (223/1026 nt)	lpxD	UDP‑3‑O‑(3‑hydroxymyristoyl)‑glucosamine N‑acyltransferase
	?	CP009273	= 197761	59 (1.560)					coding (304/1026 nt)	lpxD	UDP‑3‑O‑(3‑hydroxymyristoyl)‑glucosamine N‑acyltransferase

TGGCGATATCGTCATCACCGGCGTTGCGTCCATGCAATCTGCACAAACAGGTCACATTACGTTCATGGTTAACCCAAAATACCGTGAGCATTTAGGCTTGTGCCAGGCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTGGGTAACAACGTATCGATTGGCGCTAACGCGGTGATTGAGTCCGGCGTTGAACTGGGCGATAACGTGATTATCGGTGCCGGTTGCTTCGTAGGTAAAAACAGCAAAATCGGTGCAGGTTCGCGTCTCTGGGCGAACGTAACCATTTACCATGAGATCCAGATCGGTCAGAATTGCCTGATCCAGTCCGGAACAGTGGTAGGCGCAGACGGCTTTGGTTATGCCAACGATCGTGGTAA  >  CP009273/197517‑198029                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                                             tGGCAATACCGTCNCCCCCGGCGTTGCGTCGATGCAATCTGCACCAACGGGTCACATTACGTTACTGGTTACCCCAACATACCGTGTGCATTTAGGCTTGTGCCAGGCGTCCGCGGTTGTCATGACCCACGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTTCAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATGCCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAg                                                                                                                                                                                                                                                 <  2:539242/274‑1 (MQ=255)   gCGATAGCGTCATCACCGGCGTTGCGTCCATGCAATCTGCACAAGCAGGTCACATTACGTTCATGGTTAACCCAAAATACCGTGAGCATTTAGGCTTGTGCCAGGCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGANTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCt                                                                                                                                                                                                                                               >  1:539252/1‑274 (MQ=255)                                        tGCACAAACAGGTCACATTACGTTCATGGTTAACCCAAAATACCGTGAGCATTTAGGCTTGTGCCAGGCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCCGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCCCAGAACATTGCTCCCCGTCCGGCAACCTACGCCACGGCGAAGCTGGGTAACACCGTAACGACTGGCCCTAACGCgggcgtt                                                                                                                                                                                                          >  2:707358/1‑269 (MQ=255)                                            ctaaCAGGTCCATTTACGTTCTTGGTTACCCCAAACTACCGTGAGCATTTCGGCTTGTGCCAGTCGTCCGCGGTTGGCATGACCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAATAATCCCTACCTGACTTACGCGCGCATGGCGCAAATGTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTGGGTAACAACGTATCGATTGGCGCTAACGCGGTGATTGAGTc                                                                                                                                                                                                     <  1:326922/273‑1 (MQ=255)                                               aCAGGTCACATTACGTTCATGGTTAACCCAAAATACCGTGAGCATTTAGGCTTGTGCCAGGCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGAGGTGATCGACGCCACCCCGAAGCTGGGGAACAACGCAACGATNTGTGCCAActcgcgtatttaattct                                                                                                                                                                                                   >  2:493320/1‑261 (MQ=255)                                                   gTCACATTACGTTCATGGTTAACCCAAAATACCGTGAGCATTTAGGCTTGTGCCAGGCGTCCGCNGTTGTCATNACCCAGGACGATATTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGACGCTGGGTCACAACGTATCGATTGGCGCTAAcgcg                                                                                                                                                                                                                <  1:493329/257‑1 (MQ=255)                                                               tCATGGTTAACCCAAAATACCGTGAGCATTTAGGCTTGTGCCAGGCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACcca                                                                                                                                                                                                                                                                           >  1:200579‑M2/1‑183 (MQ=255)                                                                             aaaTACCGTGAGCATTTAGGCTTGTGCCAGGCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGc                                                                                                                                                                                                                                                >  2:604017/1‑199 (MQ=255)                                                                                 gccGTGAGCATTTAGGCTTGTGCCAGGCGGCCGGGGTTGTCATGACCAGGGACGAGCTTCCGTTCGCGAAAAGTGCCGCACTGGGAGTGAAGAATCCCTACATGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGCACATTGCACCCAGTGCGGTGGTCGACGCGACGGCGAAGCTggg                                                                                                                                                                                                                                            <  1:607079/198‑1 (MQ=255)                                                                                 aCCGTGAGCATTTAGGCTTGTGCCAGGCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTggg                                                                                                                                                                                                                                            <  1:604030/199‑1 (MQ=255)                                                                                   cGTGAGCATTTAGGCTTGTGCCAGGCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTGGGTAACAACGTATCGATTGGCGCTAACGCGGt                                                                                                                                                                                                              >  2:606143/1‑227 (MQ=255)                                                                                       aGCATTTAGGCTTGTGCCAGGCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTGGGTAACAACGTATCGATTGGCGCTAACGCGGTGAtt                                                                                                                                                                                                          <  1:606156/227‑1 (MQ=255)                                                                                                    gtgCCAGGCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTGGGTAACAACGTATCGATTGGCGCTaa                                                                                                                                                                                                                    >  1:320597/1‑204 (MQ=255)                                                                                                    gtgCCAGGCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTGGGTAACAACGTATCGATTGGCGCTAACGCGGTGATTGAGTCCGGCGTTGAACTGGGCGATAACGTGATTATCGGTGACGGTTGCTTCGTAGGGaaaa                                                                                                                                             >  1:366038/1‑275 (MQ=255)                                                                                                     tgCCAGGCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGc                                                                                                                                                                                                                                                     >  2:155631/1‑170 (MQ=255)                                                                                                        cAGGCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTGGGTAACAACGTATCGATTGGCGCTAAcgcg                                                                                                                                                                                                                <  2:320591/204‑1 (MQ=255)                                                                                                         aGGCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAg                                                                                                                                                                                                                                                 <  1:155633/170‑1 (MQ=255)                                                                                                          ggCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGCTGATCGACGCGACGGCGAAGCTGGGGAACAACGTATCGATTGGCGCTAACGCGGTGATGGAg                                                                                                                                                                                                       >  2:704672/1‑211 (MQ=255)                                                                                                          ggCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAAACTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACCTTGCACACAGTGCGGTGACCGACGCGACGGc                                                                                                                                                                                                                                                     >  1:708786/1‑165 (MQ=255)                                                                                                              tCCGCGGTTGTCATGTCCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGATGCTGGGTAACAACGTATCGATTGGCGCTAACGCGGTGATTGAGTCCg                                                                                                                                                                                                   <  1:704686/211‑1 (MQ=255)                                                                                                                             agagacagcGATATGCCGTTCGCGAAAAGTGCCGCACCGGTAGTAAAGAATCCCTTCCTGACTTACGCGCGCATGGCGCAAATTTTCGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATTGGCGCGACGGCGAAGCTGGGTAACAACGTATCGATTGGCGCTAACGCGGTGATTGAGTCCGGCGTTGAACTGGGCGATAACGTGATTATCGGTGCCGGTTGCTTCGTAGGTAAAAACAGCAAAATCGGTGCAGGTTcgc                                                                                                                     <  2:133546/266‑1 (MQ=255)                                                                                                                                 aGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCt                                                                                                                                                                                                                                               >  2:297068/1‑148 (MQ=255)                                                                                                                                  ggACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCCAGGTAACAACGNATCGATTGGCGCTAACGCGGTGATTGAGTCCGGCGGTGAACTGGGCGATAAAGTGATTATAGGGTCCGGTTGCTTCGTAGGTAAAAACAGCAAAATAGGTGCAGGGTAGCGTctct                                                                                                               >  1:663129/1‑275 (MQ=255)                                                                                                                                     cGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTGGGt                                                                                                                                                                                                                                           <  1:297073/148‑1 (MQ=255)                                                                                                                                        tCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTggg                                                                                                                                                                                                                                            >  2:619721/1‑144 (MQ=255)                                                                                                                                            ccTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTGGGTaac                                                                                                                                                                                                                                        <  1:619734/144‑1 (MQ=255)                                                                                                                                                tCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCCTGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTGGGTAACAACGTATCGATTGGCGCTAACGCGGTGATTGAGTCCGGCGTTGAACTGGGCGATAACGTGATTATCGGTGCCGGTTGCTTCGTAGGTAAAAACCGCAAAATCGGTGCAGGGTCGCGTCACTGGGCgctggcactt                                                                                                 >  1:133547/1‑266 (MQ=255)                                                                                                                                                  gcgAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCACGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTGGGTAACAAGGTATCGATTGGTGCTAACGCGGTGATTGAGTCCGGCGTTGAACTGGGCGATAACGTGATTATCGGTGCCGGTTGCTTCGTAGGTAAAAACAGCAAAATAGGTACCGGTTCGCGTCTCTGGACGAAAGTAACAAt                                                                                               >  1:697987/1‑275 (MQ=255)                                                                                                                                                                  gggtAGTGATGCTTCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACccagtgcggcacatttcgcgaaaggaagatcgtcctgggtcatgacaaccgcggacgcctgggacaatcctagatgctcacggtattttgggttaaccatgaacgtaatgtgacctgtttgtgcagattgcatggacgcaacgccggtgatgacgatatcgccatcaccgtgtagttctgcatccaactgc                                                                               >  1:178889‑M2/2‑84 (MQ=255)                                                                                                                                                                    gttgtgtAGAATCCCGACCGGCCTTCCGCGCGCATGGCGCACATTTTTGTGCCCACGCCGCAGGCCGCGAAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTGGGTAACGACGTATCGATTGGCGCTAACGCGGTGATTGAGTCCGGCGGTGAACTGGGCGATAACGTGATTATCGGTGCCGGTTGCTTCGTAGGTAAAAACAGCAAAATCGGTGCAGGTTCGCGTCTCTGGGCGAACGTAACCATTTACCATGAGCTCCAGa                                                                              <  2:224465/271‑1 (MQ=255)                                                                                                                                                                          aagaaTCCCTACCTGGCTTACGCCCGCAAGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTGGGTAACAACGTATCGATTGGCGCTAACGCGGTGATTGAGTCCGGCGTTGAACTGGGCGATAACGTGATTATCGGTNCCGGTTGCTTCGTAGGTAAAAACAGCAAAATCGGTGCAGGGTCGCGTCTCTGGGCGAACGTAACCATTTACCATGAGATCCAGATCGGTCa                                                                       >  1:507335/1‑275 (MQ=255)                                                                                                                                                                              aTCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCTGCGCAGACCATTGCACccagtgcggcacatttcgcgaaaggaagatcgccctgggtcatgaccaccgcggacgcctggccccagcctacatcctcaaggtcgtttgggttaaccatgaacgtaatgtgacatgtttgtgcagatggcatggacgcaacgccggtgagaacgatatagccagcacggagtagtgcggcatccaactgctaggcgaaatc                                                                    <  2:178887‑M2/274‑203 (MQ=255)                                                                                                                                                                              aTCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACccagtgcggcacttttcgcgaaaggaagatcgtcctgggtcatgacaaccgcggacgcctggcacaagcctaaacgctcaaggtattttgggttaaccatgaacgtaatgtgacctgtt                                                                                                                                                       <  1:646642‑M2/191‑120 (MQ=255)                                                                                                                                                                              aTCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTGGGTAACAACGTATCGATTGGCGCTAACGCGGTGATTGAGTCCGGCGTTGAACTGGGCGATAACGTGATTATCGGTGCCGGTTGc                                                                                                                                                          >  2:621644/1‑188 (MQ=255)                                                                                                                                                                               tCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGCAGCTGGGTAACAACGTATCGATTGGCGCTAACGCGGTGATTGAGTCCGGCGTTGAACTGGGCGATAACGTGATTATCGGTGCCGGTTGCTTCGTAGGTAAAAACAGCAAAATCGGTGCAGGTTCGCGTCTCTGGGCGAACGTAACCATTTACCATGAGATc                                                                                  >  1:224467/1‑259 (MQ=255)                                                                                                                                                                               tCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTGGGTAACAACGTATCGATTGGCGCt                                                                                                                                                                                                                      >  1:329570/1‑127 (MQ=255)                                                                                                                                                                               tCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTGGGTAACAACGTATCGATTGGCGCTAACGCGGTGACTGAGTCCGGCGTTGAACTGGGCGATAACGTGATTATCGGTGCCGGTTGCTTCGTAGGTAAAAACAGCAAAATCGGTGCAGGTTCGCGTCTCTg                                                                                                              >  1:177877/1‑231 (MQ=255)                                                                                                                                                                               tCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATAACACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCCAAGCTGGGTAACAACGTATCGATTGGCGCTAACGCGGTGATTGAGTCCGGCGTTGAACTGGGCGATAACGTGATTATCGGTGCCGGTTGCTTCGTAGGTAAAAACAGCAAAATCGGTGCAGGTTCGCGTCTCTTGGCGAACGTAACCATTTACCATTAGATCAAAATCTTTCATAAt                                                                   >  2:571554/1‑274 (MQ=255)                                                                                                                                                                                  cTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACTCCGCAGCCCGCGCAGAACATTGCACccagggcggcacttttcgcgaaaggaagatcgtcctgggtcatgacaaccgcggacgcctggcacaagcctaaatgctcacggtattttgggttaaccatgaacgtaatgtgacctgtttgtgcagattgcatggacgcaacgccggtgatg                                                                                                                      >  1:418203‑M2/1‑68 (MQ=255)                                                                                                                                                                                  cTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACccagtgcggcacttttcgcgaaaggaagatcgtcctgggtcatgacaaccgcggacgcctggcacaagcctaaatgctcacggtattttgggttaaccatgaacgtaatgtgacctgtttgtg                                                                                                                                                   >  2:646628‑M2/1‑68 (MQ=255)                                                                                                                                                                                  cTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTGGGTAACAACGTATCGATTGGCGCTAACGCGGTGATTGAGTCCGGCGTTGAACTGGGCGATAACGTGATTATCGGTGCCGGTTGCTTCg                                                                                                                                                      <  1:621658/188‑1 (MQ=255)                                                                                                                                                                                   tACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTGGGTAACAACGTATCGATTGGCGCTAAcg                                                                                                                                                                                                                  <  2:329564/127‑1 (MQ=255)                                                                                                                                                                                   tACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTGGGTAACAACGTATCGATTGGCGCTAACGCGGTGACTGAGTCCGGCGTTGAACTGGGCGATAACGTGATTATCGGTGCCGGTTGCTTCGTAGGTAAAAACAGCAAAATCGGTGCAGGTTCGCGTCTCTGGGCg                                                                                                          <  2:177875/231‑1 (MQ=255)                                                                                                                                                                                       tgaccatggccggcNTGGCGCAAATGCTAGATACCCCGCCGCAGCCAGCGCAGAAGATTGCACCCAGTGCGGTGATCGACGGGACGGCGAAGCTGGGTAACAACGTATCGATTGGCGGTAACGCGGTGATTGAGTCCGGCGTTGAACGGGGCGATAACGTGATTATCGGTGCCGGTTGCTTCGTAGGTAAAAACAGCAAAATCGGTGCAGGTTCGCGTCTCTGGGCGAACGTAACCATTTACCATGAGATCCAGATCGGTCAGAATTGCCTGATc                                                          <  2:549959/263‑1 (MQ=255)                                                                                                                                                                                       tGACTTACGCGGGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAANCTGGGTAACAACGTATCGAATGGCGCTAACGCGGTGATTGAGTCCGGCGTTGAACTGGGCGATAACGTGATTATCGGTGCCGGTTGCTTCGTAGGTAAAAACAGCAAAATCGGTGCAGGTTCGCGTCTCTGGGCGAACGTAACCATTTACCATGAGATCCAGATCGGTCAGAATTGCCTGATc                                                          <  1:571567/275‑1 (MQ=255)                                                                                                                                                                                       tGACTTACGCGGGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTGGGTAACAACGTATCGATTGGCGCTAACGCGGTGATTGAGTCCGGCGTTGAACTGGGCGATAACGTGATTATCGGTGCCGGTTGCTTCGTAGGTAAAAACAGCAAAATCGGTGCAGGTTCGCGTCTCTGGGCGAACGTAACCATTTACCATGAGATCCAGATCGGTCAGAATTGCCTGATc                                                          <  1:429346/275‑1 (MQ=255)                                                                                                                                                                                         aCTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTGGGt                                                                                                                                                                                                                                           >  1:274790/1‑96 (MQ=255)                                                                                                                                                                                             aCGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTGGGTaaca                                                                                                                                                                                                                                       <  2:274786/96‑1 (MQ=255)                                                                                                                                                                                                        gcgcAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTGGGTAACAACGTATCGCTTGGCGCTAACGCGGTGATTGAGTcc                                                                                                                                                                                                    >  1:110863/1‑120 (MQ=255)                                                                                                                                                                                                        gcgcAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTGGGTAACAACGTATCGATTGGCGCTAACGCGGTGATTGAGTCCGGCGTTGAACTGGGCGATAACGTg                                                                                                                                                                            <  1:236312/144‑1 (MQ=255)                                                                                                                                                                                                            aaaTTTGGGATACCACGCCGCAGCCCGCGCAGAACATTGCACCGAGTGCGGTGATCGACGCGACGGCGAAGCTGGGTAACAACGTATCGATTGGCGCTAACGCGGTGATTGAGTCCGGCg                                                                                                                                                                                                <  2:110862/120‑1 (MQ=255)                                                                                                                                                                                                                 ttAGATCTCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTGGGTAACAACGTATCGATTGGCGCTAACGCGGTGATCGAGTCCGGCGTTGAACTGGGCGATAACGTGATTATCGGTGCCGGTTGCTTCGTAGGTAAAAACAGCAAAATCGGTGCAGGTTCGCGTCTCTGGGCGAACGTAACCATTTACCATGAGATCCAGATCGGTCAGAATTGCCTGATCCAGTCCGGAACAGTGGTAGGCGCAGa                                <  1:458373/275‑1 (MQ=255)                                                                                                                                                                                                                   tccgttcccgccgcGGGCCGCGCAGGACAGTGCGCCCATTGCGGTGATCGCCGCGAGGTCGAAGTGGGTTAGCAACGTAGCGATTGGCGCTTAAGCGGTGATTGAGTCCGGCGGTGAACTGTGCGAGAACGGGATTAGCGGTGCCGGTTGCTTCGTTGTTAAAAACAGCAAACTCGGTGCAGGTTCGCGTCTCTGGTCGAACGTAACCATTTACCATGAGATCCAGATCGGTCAGAATTGCCTGATCCAGTCCGGAACAGTGGTAGGCGCAGAc                               <  2:123579/266‑1 (MQ=255)                                                                                                                                                                                                                         cACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTGGGTAACAACGTATCGATTGGCGCTAACGCGGTGATTGAGTCCGGCGTTGAACTGGGCGATAACGTGATTATCGGTGCCGGTTGCTTCGTAGGTAAAAACAGCAAAATCGGTGCAGGTTCGCGTCTCTGGGCGaa                                                                                                        >  2:328231/1‑195 (MQ=255)                                                                                                                                                                                                                            gccgcAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTGGGTAACAACGTATCGATTGGCGCTAACGCGGTGATTGAGTCCGGCGTTg                                                                                                                                                                                             >  1:736223/1‑107 (MQ=255)                                                                                                                                                                                                                             ccgcAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTGGGTAACAACGTATCGATTGGCGCTAACGCGGTGATTGAGTCCGGCGTTGAACTGGGCGATAACGTGATTATCGGTGCCGGTTGCTTCGTAGGTAAAAACAGCAAAATCGGTGCAGGTTCGCGTCTCTGGGCGAACGTa                                                                                                    <  1:328237/195‑1 (MQ=255)                                                                                                                                                                                                                              cggaGCCCGCGCAGAACTGTGCCCCCAGTGCGGGGATCGACGCGACGGCGAAGCTGGGTAACAACGTATCGAGTGGCGCTAACGCGGTGAGTGAGTGCGGCGTTGAACTGGGCGATAACGTGATTATCGGTGCCGGTTGCGTCGTAGGTAAAAACAGCAAAATCGGTGCAGGGTCGCGTCTCTGGGCGAACGTAACCAGTTACCATGAGATCCAGATCGGTCAGAATTGCCAGGTCCAGTCCGGAACAGTGGTAGGCGCAGACGGCTTTGGtt                     <  2:238403/270‑1 (MQ=255)                                                                                                                                                                                                                              cgcAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATcg                                                                                                                                                                                                                                                               >  1:161536/1‑39 (MQ=255)                                                                                                                                                                                                                                cAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTGGGTAACAACGTATCGATTGGCGCTAACGCGGTGATTGAGTCCGGCGTTGAACt                                                                                                                                                                                         <  2:736209/107‑1 (MQ=255)                                                                                                                                                                                                                                  gCCCGCGCAGAACATTGCACCCAGTGCGGTGATcgacgc                                                                                                                                                                                                                                                           <  2:161534/39‑1 (MQ=255)                                                                                                                                                                                                                                   cccGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTGGGTAACAACGTATCGATTGGCGCTAACGCGGTGATTGAGTCCGGCGTTGAACTGGGCGATAACGTGATTATCGGTGCCGGTTGCTTCGTAGGTAAAAACAGCAAAATCGGTGCAGGTTCGCGTCTCTGGGCGAACGTAACCATTTACCATGAGATCCAGATCGGTCAGAATTGCCTGATCCAGTCCGGAACAGTGGTAGGCGCAGACGGCttt                         >  1:238406/1‑264 (MQ=255)                                                                                                                                                                                                                                       cgcAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTGGGTACCAACGTATCGATTGGCGCTAACGCGGTGATTGAGTCCGGCGTTGAACTGGGCGATAACGTGATTATCGGTGCCGGTTGCTTCGTAGGTAAAAACAGCAAAATCGGTGCAGGTTCGCGTCTCTGGGCGAACGTAACCATTTACCATGAGATCCAGATCGGTCAGCATTGCCTGATCCAGTCCGGAACAGTGGTAGGCGCAGGCGGCTTTGGTTATGCCAACGAt          >  1:187934/1‑275 (MQ=255)                                                                                                                                                                                                                                            aaCATTGCACCCAGTGCGGTGATCGACGCGACGGc                                                                                                                                                                                                                                                     >  1:395665/1‑35 (MQ=255)                                                                                                                                                                                                                                               aTTGCCACCAGGGCGGGGATAGAAGCGACGGCGACGCTGGGTAAAAACGTATCGATTGGCGCTTACTCTGTGATTGAGTCCGGCGTTGAACTGGGAGATAAAGTGATTATCGGGGCCGGTTGCTTCGTAGGTAAAAACAGCAAAATCGGTGCAGTTTCACGTCTCTGGGCGAACGTAACCATTTACCATGGGATCCGGAGCGGTCAGAAGTGCCTGATCCAGTCCGGAACAGTGGTAGGCGCAGACGGCTTTGGTTATGGCAACGATCGTGGTaa  <  2:187932/275‑1 (MQ=255)                                                                                                                                                                                                                                                ttGCACCCAGTGCGGTGATCGACGCGACGGCGAAg                                                                                                                                                                                                                                                 <  2:395658/35‑1 (MQ=255)                                                                                                                                                                                                                                                 tGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTGGGTAACAACGTATCGATTGGCGCTAACGCGGTGATTGAGTCCGGCGTTGAACTGGGCGATAACGTGATTATCGGTGCCGGTTGc                                                                                                                                                          >  2:343072/1‑121 (MQ=255)                                                                                                                                                                                                                                                     cccAGTGCGGTGATCGACGCGACGGCGAAGCTGGGTAACAACGTATCGATTGGCGCTAACGCGGTGATTGAGTCCGGCGTTGAACTGGGCGATAACGTGATTATCGGTGCCGGTTGCTTCg                                                                                                                                                      <  1:343078/121‑1 (MQ=255)                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                                             TGGCGATATCGTCATCACCGGCGTTGCGTCCATGCAATCTGCACAAACAGGTCACATTACGTTCATGGTTAACCCAAAATACCGTGAGCATTTAGGCTTGTGCCAGGCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTGGGTAACAACGTATCGATTGGCGCTAACGCGGTGATTGAGTCCGGCGTTGAACTGGGCGATAACGTGATTATCGGTGCCGGTTGCTTCGTAGGTAAAAACAGCAAAATCGGTGCAGGTTCGCGTCTCTGGGCGAACGTAACCATTTACCATGAGATCCAGATCGGTCAGAATTGCCTGATCCAGTCCGGAACAGTGGTAGGCGCAGACGGCTTTGGTTATGCCAACGATCGTGGTAA  >  CP009273/197517‑198029

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.