New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	2358074 =	29 (0.720)	4 (0.100)	3/298	NT	14.6%	coding (42/426 nt)	nudI	nucleoside triphosphatase
	?	CP009273	2358268 =	19 (0.490)					coding (236/426 nt)	nudI	nucleoside triphosphatase

TTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGTGCATTATGATTTGAATGTCGCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCATCCAGATA  >  CP009273/2358005‑2358526                                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                                   tttCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCaa                                                                                                                                                                                                                                                                    <  1:82102/264‑1 (MQ=255)       tttatttaTAAGGAAGATCCCTGGGCGAGAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATNCGCGAAGAACTGGGAGAACAGATGCTTTTGACAGAAATCACGACGTGGACCTTCAGCGATGATATTAGACCAAAAAAGTAAGCAGAAGGTc                                                                                                                                                                                                                                                   >  1:499149/1‑275 (MQ=255)                             gtgCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATTGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGAt                                                                                                                                                                                                                             <  1:371976/275‑1 (MQ=255)                                                  tGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGTCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCaa                                                                                                                                                                                                                                               >  1:423902/1‑236 (MQ=255)                                                  tGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCaa                                                                                                                                                                                                                                               >  1:57992/1‑236 (MQ=255)                                                                   tgatgGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTNCCCCGGTCAATGGGCGATATCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTta                                                                                                                                                                                                                                   <  1:527998/231‑1 (MQ=255)                                                                                     gtgtACAATGGCCGACGATCGCGGCGTTATCCCCGGTCAATGTGCGATTTCGGGTGGCGGCGCGGAGCCTGGCGAGCGAATTGAAGCGGCACTACGCAGCGATATTCGCGCAGCACTGGGAGACCAGCTGCTTTTGCCCGAAATCACGCCATGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGACAAGCTTTATATGATTAACCTGTTTTTTGAATGCGGTTCTGCCAACCGTAGAGTGAACAGACACGaa                                                                                                                                                                         >  2:308810/1‑271 (MQ=255)                                                                                        tAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTc                                                                                                                                                                  >  1:239875/1‑275 (MQ=255)                                                                                                                 ttCCCCGGTCAATGGGCGATATCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTTCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAATTTCAGGACTACGAGTGGGTAAAAACTGa                                                                                                                                         >  1:336695/1‑275 (MQ=255)                                                                                                                                                                acgaaTTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGt                                                                                                                                                                                                        >  2:57557/1‑165 (MQ=255)                                                                                                                                                                    aTTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCt                                                                                                                                                                                                    <  1:57558/165‑1 (MQ=255)                                                                                                                                                                             gCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTAt                                                                                                                                                                                                                                                             >  2:111256/1‑99 (MQ=255)                                                                                                                                                                             gCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTTAAAATAAACGCAGAGTTTCAGGACTACGCGTTGGTAAAACCTGAAGATCTGGTGCATTATGATTTGAATGTCGCCACACGAAAAACGTTACGTTTGAAAGAtct                                                                             >  1:113512/1‑275 (MQ=255)                                                                                                                                                                                 tACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAg                                                                                                                                                                                                                                                         <  1:111257/99‑1 (MQ=255)                                                                                                                                                                                  aCGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGTGCATTATGATTTGAATGTCGCCACCCGAAAAACGAGACGTTTGCAAGGTCTACTg                                                                         >  2:133703/1‑274 (MQ=255)                                                                                                                                                                                       gctaaaTTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGTGCATTATGATTTGAATGTCGCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACa                                                                    <  1:133704/271‑1 (MQ=255)                                                                                                                                                                                             ttCGCGAAGAACTGGGAGAACAGCTGCGTTTGACAGAAATCACGCCGTGGAACTTCAGCGATGATATTCGCACCAATACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGTGCATTATGATTTGAATGTCGCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAatgatg                                                              <  1:308815/274‑1 (MQ=255)                                                                                                                                                                                               gccacccgaaatcgcacattgacggggggaaacgccgcgatcgtcggccattttacacagcaaataagcaccaAGACGTATGCAGATGGTCGCAAGGAAgaga                                                                                                                                                                                                                                       >  1:501998‑M2/74‑103 (MQ=255)                                                                                                                                                                                                   cccgaaatcgcccattgaccggggaaaacgccgcgatcgtcggccattttacacagcaaataagcaccaAGACGTATGCAGATGGTCGCAAGGAAGAGATTta                                                                                                                                                                                                                                   <  2:501989‑M2/34‑1 (MQ=255)                                                                                                                                                                                                           cgcccattgaccggggaaaacgccgcgatcgtcggccattttacacagcaaataagcaccaAGACGTATGCAGATGGTCGCAAGGAAgaga                                                                                                                                                                                                                                       >  2:342061‑M2/62‑91 (MQ=255)                                                                                                                                                                                                               cattgaccggggaaaacgccgcgatcgtcggccattttacacagcaaataagcaccaAGACGTATGCAGATGGTCGCAAGGAAGAGATTta                                                                                                                                                                                                                                   <  1:342067‑M2/34‑1 (MQ=255)                                                                                                                                                                                                                cgaGCTGTTTTTTACAGCAATCACCCCGGTAACCTTAAACGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGAATTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGTGCATTATGATTTGAATGTCGCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCATTACTGGCTGt                                            <  2:239872/271‑1 (MQ=255)                                                                                                                                                                                                                     ttagtttGACAGCAATTCCGCTGTGGACCCTCTGCGATGTTTTTCACACCAATATGTATGCAGATGGTCGAAAAGAAAAGATTTAGATGATTTTACTGATTTTTGACTGCAGTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGAGTAAAACCTGAAGATCTGGTGCATTATGATTTGAATTTCGCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCATTACTGGCTGTCAGAt                                       <  2:101872/269‑1 (MQ=255)                                                                                                                                                                                                                                                         atgatATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGCGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGTGCATTATGATTTGAATGTCGCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCATCCAGATa  >  1:78895/1‑274 (MQ=255)                                                                                                                                                                                                                                                                    accaAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGt                                                                                                                                                      >  1:654813‑M2/5‑115 (MQ=255)                                                                                                                                                                                                                                                                        aGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGt                                                                                                                                                  <  2:654799/115‑1 (MQ=255)                                                                                                                                                                                                                                                                        aGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGaa                                                                                                                                        >  2:84140/1‑125 (MQ=255)                                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                                   TTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGTGCATTATGATTTGAATGTCGCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAACAATGATGACAGCCATTACTGGCTGTCAGATTGAAAATTTAGTGGTTAACGAATTCCCCATCCAGATA  >  CP009273/2358005‑2358526

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.