New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 272148	NA (NA)	7 (0.190)	3/290	NT	11.3%	noncoding (387/429 nt)	IS911	repeat region
	?	CP009273	= 272562	55 (1.460)					coding (137/933 nt)	mmuM	CP4‑6 prophage; S‑methylmethionine:homocysteine methyltransferase

TGTGTTGGGCTGGCATTCGATCCAGCGCAGAGAATTGCGTTGTGGTGCGGGTTACCGTTTGTTGCGTTGTGCTATGGTGCTTATTTCCTTACTCAACCCCGAAACGCAAAACAGGAGCCAGAACATGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCAGGCGACGCCGGCGGGCTTCGCCGCGCGAGGTCTGGATGAAGCGCAGTCGAAAGCGCTGATT‑GGCAAAAGCGTGGAGCTGGCGCGTAAAGCCCGTGAAGCGTATCTGGCAGAGAACCCGCAGGCGGGAACGCTTCTGGTGGCGGGATCCGTCGGGCCTTACGGCGCGTATCTGGCGGATGGCTCTGAATACCG  >  CP009273/272302‑272832                                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                                                tgtgTTGGGCTGGCATTCGATCCAGCGCAGAGAATTGCGTTGTGGTGCGGGTTACCGTTTGTTGCGTTGTGCTATGGTGCTTATTTCCTTACTCAACCCCGAAACGCAAAACAGGAGCCAGAACATGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGGCAGGCGGGGGGCAGCCAAAGTGGGGGTAGAaanacgcgatctcg                                                                                                                                                                                                                                                                   <  2:71049‑M2/275‑15 (MQ=255)     ttGGGCTGGCATTCGATCCAGCGCAGAGAAGTGCGTTGTGGTGCGGGTTACCGTTTGTTGCGTTGTGCTATGGTGCTTATTTCCTTACTCAACCCCGAAACGCAAAACAGGAGCCAGAACATGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGa                                                                                                                                                                                                                                                                                 <  1:71050/257‑1 (MQ=255)             gCATTCGATCCAGCGCAGAGAATTGCGTTGTGGTGCGGGTTACCGTTTGTTGCGTTGTGCTATGGTGCTTATTTCCTTACTCAACCCCGAAACGCAAAACAGGAGCCAGAACATGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTg                                                                                                                                                                                                                                                        >  1:276130/1‑274 (MQ=255)                ttatctCCANCGCCGGGAGTTGCTTTTTGGGGCGGGTTACCGTTTGTTGCGTTGTGCTTTGGTGCTTATTTCCTTACTCAACCCCGAAACGCAAACCAGGAGCCAGAACATGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATc                                                                                                                                                                                                                                                    <  2:276126/270‑1 (MQ=255)                   gATCCAGCGCTGAGAATTGCGTTGTGGTGCGGGTTACCGTTTGTTGCGTTGTGCTATGGTGCTTATTTCCTTACTCAACCCCGAAACGCAAAACAGGAGCCAGAACATGTCGCAGAATANTCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATc                                                                                                                                                                                                                                                    <  1:615725/272‑1 (MQ=255)                           gcAGGGAGTTGCTTTTTGGTGCGGGTTAACGTTTGTTGCGTTTTGCTATGGTGCTTATTTCCTTACTCAACCCCGAAACCCAAAACAGGCGCCAGAACATGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCAGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATtacta                                                                                                                                                                                                                                          <  1:365687/274‑1 (MQ=255)                                    tGCGTTGTGGTGCGGGTTACCGTTTGTTGCGTTGTGCTATGGTGCTTATTTCCTTACTCAACCCCGAAACGCAAAACAGGAGCCAGAACATGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAAAAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGTGTACCTTAGCCGACAGCCTGTGGTCAGCCAAAGGGCTGGTAGAa                                                                                                                                                                                                                                                                                <  1:465129‑M2/227‑2 (MQ=255)                                       gTTGTGGTGCGGGTTACCGTTTGTTGCGTTGTGCTATGGTGCTTATTTCCTTACTCAACCCCGAAACGCAAAACAGGAGCCAGAACATGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGa                                                                                                                                                                                                                                                                                 <  2:459493/223‑1 (MQ=255)                                                                                cTTATTTCCTTACTCAACCCCGAAACGCAAAACAGGAGCCAGAACATGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAACCAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGCCAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGATTATCCGCGAAGTGCATCTTGATTACTCACGGGCGGGGGGGCAATGCGCGGACACTAGCAGCTACCAGGCCACGCCGGCggg                                                                                                                                                                                    >  2:38435/1‑275 (MQ=255)                                                                                        cTTACTCAACCCCGAAACGCAAAACAGGAGCCAGAACATGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCTGTGGTAAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAAGGCGCGATCAGGGCCAGCTAGCCGGCCAcccccggcgccgtgcc                                                                                                                                                                              >  2:594748/1‑261 (MQ=255)                                                                                          tACTCAACCCCGAAACGCAAAACAGGAGCCAGAACATGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCGGTGGTCAGCCACAGTGCTGGTAGAAAAACCGGAGCTTATACGCGCAGTGCATCTTGATTACTACCGGGCGGGGGCGCAAGGCGGGATCACTGCCAGCTACCAGGGGCGGCCGGCGGGccagtccgcg                                                                                                                                                                          >  2:91986/1‑266 (MQ=255)                                                                                                  cccGAAACGCAAAACAGGAGCCAGAACATGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCAGGCGACGCCGGCGGGCTTCGCCGCGCGAGGTc                                                                                                                                                                   >  1:270229/1‑274 (MQ=255)                                                                                                                     gCCAGAACATGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGAGACCACTGCCAGCTATCAGACGACGCCGGCGGGCGTGGCCCGGCGAGGGGTGGATGAGgcggacgcgcga                                                                                                                                               >  2:664938/1‑266 (MQ=255)                                                                                                                                           tCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCAGGCGACGCCGGCGGGCTTCGCCGCTCGAGGGCTGGAGGAAGCGCAGTCTAAAGCGCTGATT‑TTCaaaatctttt                                                                                                                        >  2:519536/1‑269 (MQ=255)                                                                                                                                             cGTTACGCGCTCTTCTTTATAAACACGATATCCTGCTGCTGGATGGCGCTATGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCAGGCGAGGCCGGCGGGCTTCGCCGCGCGAGGTCTGGATGAAGCGCAGTCGAAATCGCAGATT‑GGCAAAAGCATGGa                                                                                                                       >  1:41136/1‑274 (MQ=255)                                                                                                                                                tACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGCAGTGCATCTTGATTACTACCGGGCGGGGGCGCACTGCGCGATCACTGCCAGCTATCAGGCGACGCCGGCGGGCTTCGCCGCGCGCGGCCTGGATGAAGCGCAGTCGCAAGCGCTGATT‑GGCGAAAGCGTGGAGCTg                                                                                                                   >  1:226497/1‑275 (MQ=255)                                                                                                                                                 cctcgcTCTTTTTTTTAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTCGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCAGGCGACGCCGGCGGGCTTCGCCGCGCGAGGTCTGGATGAAGCGCAGTCGAAAGCGCTGATT‑GGCAAAAGCGTGGAGCTgg                                                                                                                  <  1:38436/272‑1 (MQ=255)                                                                                                                                                       tcttctTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCt                                                                                                                                                                                                                                                   >  2:581645/1‑141 (MQ=255)                                                                                                                                                        cttcttGATAAACGGGATATCCTTGTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCTGTGGTNAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCAGGCGACGCCGGCGGGCTTCGCCGCGCGAGGTCTGGATGAAGCGCAGTCGAAAGCGCTGATT‑GGTAAAAGCGTGGAGCTGGCGCGTaa                                                                                                           <  1:519545/275‑1 (MQ=255)                                                                                                                                                        cttcttGATAAACAGGATATCCTGATGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCAGGCGACGCCGGCGGGCTTCGCCGCGCGAGGTCTGGATGAAGCGCAGTCGAAAGCGCTGATT‑GGCAAAAGCGTGGAGCTGGCGCGTaa                                                                                                           <  1:463668/275‑1 (MQ=255)                                                                                                                                                           cttGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGAt                                                                                                                                                                                                                                               <  1:581658/141‑1 (MQ=255)                                                                                                                                                                 aaaCAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCAGGCGACGCCGGCGGGCTTCGCCGCGCGAGGTCTGGATGAAGCGCAGTCGAAAGCGCTGATT‑GGCAAAAGCGTGGAGCTGGCGCGTAAAGCCCGTGa                                                                                                  >  1:113256/1‑275 (MQ=255)                                                                                                                                                                   aCAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAACCCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCAGGCGACGCCGGCGGGCTTCGCCGCGCGAGGTCTGGATGAAGCGCAGTCGAAAGCGCTGATT‑GGCAAAAGCGTGGAGCTGGCGCGTAAAGCCCGTGAAg                                                                                                >  1:107391/1‑275 (MQ=255)                                                                                                                                                                   aCAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATcc                                                                                                                                                                                                                                                                >  1:150643/1‑116 (MQ=255)                                                                                                                                                                   aCAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGaa                                                                                                                                                                                                                                                           >  2:495273/1‑121 (MQ=255)                                                                                                                                                                   aCAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCAg                                                                                                                                                                                                  >  2:37591/1‑178 (MQ=255)                                                                                                                                                                   aCAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCAGGCGACGCCGGCGGGCTTCGCCGCGCGCGGTCTGGATGAACGGGAGTCGAAAGCGCGGATTGGGCAACAG‑GGGGAGCTGGCGGGGAGAGCCCGGGAAg                                                                                                >  2:22882/1‑275 (MQ=255)                                                                                                                                                                   aCAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCAGGCGACGCCGCCGGGCTTCGCCGCGCGAGGTCTGGATGAAGCGCAGTCGAAAGCGCTGATT‑GGCAAAAGCGTGGAGCTGGCGCGTACAGCACGTGAAg                                                                                                >  1:111693/1‑275 (MQ=255)                                                                                                                                                                       ggtatCCTGCGGCTGGATGGCGCGATGGCGACGGAGCGGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCAGGCGACGCCGGCGGGCTTCGCCGCGCGAGGTCTGGATGAAGCGCAGTCGAAAGCGCTGATT‑GGCAAAAGCGTGGAGCTGGCGCGTAAAg                                                                                                         <  1:22883/260‑1 (MQ=255)                                                                                                                                                                       gATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGa                                                                                                                                                                                                                                                            <  2:150642/116‑1 (MQ=255)                                                                                                                                                                       gATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGc                                                                                                                                                                                                                                                       <  1:495282/121‑1 (MQ=255)                                                                                                                                                                       gATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCAGGCGa                                                                                                                                                                                              <  1:37592/178‑1 (MQ=255)                                                                                                                                                                        atatCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTg                                                                                                                                                                                                                                                        >  2:288134/1‑119 (MQ=255)                                                                                                                                                                          atCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAGTGCGCGATCACTGCCAGCTATCAGGCGACGCCGGCGGGCTTCGCCGCGCGAGGTCTGGATGa                                                                                                                                                            >  1:654647/1‑209 (MQ=255)                                                                                                                                                                            ccTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATc                                                                                                                                                                                                                                                    <  1:288139/119‑1 (MQ=255)                                                                                                                                                                              tgctgctgGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCAGGCGACGCCGGCGGGCTTCGCCGCGCGAGGTCTGGATGAAgcg                                                                                                                                                        <  2:654633/209‑1 (MQ=255)                                                                                                                                                                               gctgctgGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCAGGCGACGCCGGCGGGCTCCGCCGCGCGAGGTCTGGATGAAGCGCAGTCGAAAGCGATGATT‑GGCAAAAGCGTGGAGCTGCGGCGTAAAGCCGCTGAAGccacgccggaca                                                                                    >  1:26480/1‑264 (MQ=255)                                                                                                                                                                                 tgctgGATGGTGCGATGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCAGGCGACGCCGGCGGGCTTCGCCGCGCGAGGTCGGGATGAAGCGCAGTCGAAAGCGCTGATT‑GGCAAAAGCGTGGAGCTGGCGCGTAAAGCCCGTGAAGCGTCTCTGGCagag                                                                                  >  1:718708/1‑275 (MQ=255)                                                                                                                                                                                 tgctgGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGTGCGCAATGCGCGATCACTGCCAGCTATCAGGCGACGCCGGCGGGCTTCGCCGCGCGCGGGCTGGATGAAGCGCAGGCGAAAGCGCGGATT‑GGCAAAAGGGGGGAGGGGGCGGGGAAAGCACGTGAGGCGGAtggtggaggg                                                                                  >  2:307031/1‑266 (MQ=255)                                                                                                                                                                                     ggATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATcc                                                                                                                                                                                                                                                                >  2:441880/1‑98 (MQ=255)                                                                                                                                                                                       aTGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGCAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATta                                                                                                                                                                                                                                             >  2:542088/1‑115 (MQ=255)                                                                                                                                                                                        ggggtcgATGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCATTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACNACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCAGGCGACGCCGGCGGGCTTCGCCGCGCGAGGTCTGGATGAAGCGCAGTCGAAAGCGCTGATT‑GGCAAAAGCGTGGAGCTGGCGCGTAAAGCCCGTGAAGCGTATCTGGCAGAGAACCCg                                                                            <  1:664952/269‑1 (MQ=255)                                                                                                                                                                                         ggCGCGATGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGa                                                                                                                                                                                                                                                            <  1:441887/98‑1 (MQ=255)                                                                                                                                                                                           cgcgCTGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCTGCGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTCATCCGCGCAGTGCATCTTGATTACTACCGGGCgggg                                                                                                                                                                                                                                >  1:667695/1‑124 (MQ=255)                                                                                                                                                                                           cgcgATGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCt                                                                                                                                                                                                                                                   >  1:720388/1‑105 (MQ=255)                                                                                                                                                                                           cgcgATGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATtactac                                                                                                                                                                                                                                         <  1:542099/115‑1 (MQ=255)                                                                                                                                                                                             cgATGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCACTCAGGCGACGNCGGCGGGCTTCGCCGCGCGAGGTCTGGATGAAGCGCAGTCGAAAGCGCTGATT‑GGCAAAAGCGTGGAGCTGGCGCGTAAAGCCCGTGAAGCGTATCTGGCAGAGAACCCGCAGGCg                                                                      >  1:682774/1‑275 (MQ=255)                                                                                                                                                                                               aTGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGAt                                                                                                                                                                                                                                               <  2:720374/105‑1 (MQ=255)                                                                                                                                                                                                                  cgcgAGGGTGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCAGGCGACGCCGGCGGGCTTCGCCGCGCGAGGTCTGGATGAAGCGCAGTCGAAAGCGCTGATT‑GGCAAAAGCGTGGAGCTGGCGCGTAAAGCCCGTGAAGCGTATCTGGCAGAGAACCCGCAGGCGGGAACGCTTCTGGTGGCggg                                                  <  1:307036/274‑1 (MQ=255)                                                                                                                                                                                                                   gcgAGGGTGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAaaacccggagattgccgacagcgcaacaaataccgtgtccggggccaccacgctggaaaacagcgccagcacaccaccgagcatactgaccgacagcgacgtcagtggcacgccgtttttcgttac                                                                                                                                                   <  2:601472‑M2/177‑127 (MQ=255)                                                                                                                                                                                                                       gggTGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAaaacccggagattgccgacagcgcaacaaataccgtgtccggggccaccacgctggaaaacagcgccagcacaccaccgagcatactgaccgacagcgccgtcagtggcacgccgtttttcgttactcgc                                                                                                                                               >  1:601485‑M2/1‑47 (MQ=255)                                                                                                                                                                                                                            tAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCGGGCGACGCCGGCGGGCTTCGCCGCGCGAGGGCTGGACGAAGCGCAg                                                                                                                                                     >  2:415797/1‑166 (MQ=255)                                                                                                                                                                                                                                   gCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAaaacccggagattgccgacagcgcaacaaataccgtgtccggggccaccacgctggaaaacagcgccagcacaccaccgagcatactgaccgacagcgccgtcagtggcacgccgtttttcgttac                                                                                                                                                   <  2:191121‑M2/161‑127 (MQ=255)                                                                                                                                                                                                                                   gCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAaaacccggagattgccgacagcgcaacaaataccgtgtccggggccaccacgctggaaaacagcgccagcacaccaccgagcatactgaccgacagcgccgtcagtggcacgccgtttttcgttac                                                                                                                                                   <  2:712532‑M2/161‑127 (MQ=255)                                                                                                                                                                                                                                   gCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAaaacccggagatggccgacagcgcaacaaataccgtgtccggggccaccacgctggaaacaagcgccggcccaccacgaacaatactaaccgacagcgccgtaattgccacg                                                                                                                                                                 <  1:714122‑M2/147‑113 (MQ=255)                                                                                                                                                                                                                                   gCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCAGGCGACGCCGGCGGGCTTCGCCGCGCGAGGTCTGGATGAAGCGCAGTCGAACGCGCTGATT‑GGCAAAAGCGTGGAGCTGGCGCGTAAAGCCCGTGAAGCGTATCTGGCAGAGAACCCGCAGGCGGGAACGCGTCTGGTGGCGGGATCCGTCGGGCCTTACgg                                >  1:71411/1‑275 (MQ=255)                                                                                                                                                                                                                                   gCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCAGGCGACGCCGGCGGGCTTCGCCGCGCGAGGTCTGGATGAAGCGCAGTCGAAAGCGCTGATT‑GGCTAAAGCGTGGAGCTGGCGCGTAAAGCCCGTGAAGCGTATCTGGCAGAGAACCCGCAGGCGGGAACGCTTCTGGTGGCGGGATCCGTCGGGCCTTACgg                                >  1:385986/1‑275 (MQ=255)                                                                                                                                                                                                                                    ccGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCAGGCGACGCCGGCGGGCTTCGCCGCGCGAGGTCTGGATGAAGCGCAGTCGAAAGCGCTGATT‑g                                                                                                                                    >  1:85037/1‑174 (MQ=255)                                                                                                                                                                                                                                    ccGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCAGGCGACGCCGGCGGGCTTCGCCGCGCGAGGTCTGGATGAAGCGCAGTCGAAAGCGCTGATT‑GGCAAAAGCGTGGAGCTGGCGCGTAAAGCCCGTGAAGCGTATCTGGCAGAGAACCCGCAGGCTGGAACGCTTCTGGTGGCGGGATCCGTCGGGCCTTACGgc                               >  1:466934/1‑275 (MQ=255)                                                                                                                                                                                                                                       aCAGCCTGTGGTCAGCCAAAGTGCTGGTAGAaaacccggagattgccgacagcgcaacaaataccgtgtccggggccaccacgctggaaaacagcgccagcacaccaccgagcatactgaccgacagcgccgtcagtggcacgccgtttttcgttactcgc                                                                                                                                               >  1:712546‑M2/1‑31 (MQ=255)                                                                                                                                                                                                                                       aCAGCCTGTGGTCAGCCAAAGTGCTGGTAGAaaacccggagattgccgacagcgcaacaaataccgtgtccggggccaccacgctggaaaacagcgccagcacaccaccgagcatactgaccgacagcgccgtcagtggcacgccgtttttcgttactcgc                                                                                                                                               >  1:191123‑M2/1‑31 (MQ=255)                                                                                                                                                                                                                                        cAGCCTGGGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCAGGCGACGCCGGCGGGCTTCGCCGCGCGAGGTCTGGATGAAGCGCAGTCGAAAGCGCTGATT‑GGCaa                                                                                                                                <  2:85036/174‑1 (MQ=255)                                                                                                                                                                                                                                                    aGCCAAAGTGCTGGTAGAAAACCCGGCGCTTATCCGTGAAGTTCATTTTGATTACTACCGGGCGGGGGCGCAAGGCGCGATCACTGCCAGCTATCAGGCGACGCCGGCGGGCTTCGCCGCGCGAGGTCTGGATGAAGCGCAGTCGAAAGCGCTGATT‑GGCAAAAGCGTGGAGCTGGCGCGTAAAGCCCGTGAAGCGTATCTGGCAGAGAACCCGCAGGCGGGAACGCTTCTGGTGGCGGGATCCGTCGGGCCTTACGGCGCGTATCTGGCGGATg               <  1:203115/275‑1 (MQ=255)                                                                                                                                                                                                                                                     gCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCAGGCGACGCCGGCGGGCTTCGCCGCGCGAGGTCTGGATGAAGCGCAGTCGAAAGCGCTGATT‑GGCAAAAGCGTGGAGCTGGCGTGTAAAGCCCGTGAAGCGTATCTGGCAGAGAACCCGCAGGCGGGAACGCTTCTGGTGGCGGGACCCCGCCGGCCATCCGGCGCGTATCTGGCGAATgg              >  1:370992/1‑275 (MQ=255)                                                                                                                                                                                                                                                     gCCAAAGGGCTGGTAGAAAACCCGGAGTTTATCCGCGAAGGGCATCTTGATTACTGCCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCAGGCGACGCCGGCGGGCTTCGCCGCGCGAGGTCTGGATGAAGCGCAGTCGAAAGCGCTGATT‑GGCAAAAGCGTGGAGCTGGCGCGTAAAGCCCGTGAAGCGTATCTGGCAGAGAACCCGCAGGCGGGAACGCTTCTGGTGGCGGGATCCGTCGGGCCTTACGGCGCGTATCTGGCGGATg               <  1:130029/274‑1 (MQ=255)                                                                                                                                                                                                                                                      caaaaGTGTTGGTAGAAACACAGGATCTTATCGTTGAAGTGCATCTTGATGACTACCGGGCGGGGGTGCAATGCGCGATTACTGCAAGCTATCAGGCGACGCCGGCGGGCTTCGCCGCGCGAGGTCTGGATGAAGCGCAGTCGAAAGCGCTGATT‑GGCAAAAGCGTGGAGCTGGCGCGTAAAGCCCGTGAAGCGTATCTGGCAGAGAACCCGCAGGCGGGAACGCTTCTGGTGGCGGGATCCGTCGGGCCTTACGGCGCGTATCTGGCGGATGGc             <  1:722930/273‑1 (MQ=255)                                                                                                                                                                                                                                                                  tAGAAAGCCCTGAGTTTATCCGCGAAGGTCATCTTGAGTTCTACCGGGGGGGGGCGAAATGCGGGATCACTGCAAGCTAGCAGGCGACGACGGCGGTCTGCGCCGCGCGAGGTCTGGACGAAGCGCAGTCGAAAGCGCTGATT‑GGCAAAAGCGTGGAGCTGGCGCGTAAAGCCCGTGAAGCGTATCTGGCAGAGAACCCGCAGGCGGGAACGCTTCTGGTGGCGGGATCCGTCGGGCCTTACGGCGCGTATCTGGCGGATGGCTCTGAATACCg  <  1:417398/274‑1 (MQ=255)                                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                                                TGTGTTGGGCTGGCATTCGATCCAGCGCAGAGAATTGCGTTGTGGTGCGGGTTACCGTTTGTTGCGTTGTGCTATGGTGCTTATTTCCTTACTCAACCCCGAAACGCAAAACAGGAGCCAGAACATGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCAGGCGACGCCGGCGGGCTTCGCCGCGCGAGGTCTGGATGAAGCGCAGTCGAAAGCGCTGATT‑GGCAAAAGCGTGGAGCTGGCGCGTAAAGCCCGTGAAGCGTATCTGGCAGAGAACCCGCAGGCGGGAACGCTTCTGGTGGCGGGATCCGTCGGGCCTTACGGCGCGTATCTGGCGGATGGCTCTGAATACCG  >  CP009273/272302‑272832

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.