| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 370616 | 37 (0.920) | 7 (0.180) +T |
5/308 | NT | 16.0% | noncoding (231/436 nt) | REP31 (repetitive extragenic palindromic) element; contains 9 REP sequences | REP31 (repetitive extragenic palindromic) element; contains 9 REP sequences |
| ? | CP009273 | = 372947 | NA (NA) | noncoding (157/187 nt) | REP32 (repetitive extragenic palindromic) element; contains 4 REP sequences | REP32 (repetitive extragenic palindromic) element; contains 4 REP sequences | |||||
TGTTGCACAGCGCGCTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTAACGTCTTGATATTCATCTCCTGGCAGATCTTTTCAAGATTTGGAGTCCGCAGCTGTTCTGCGTAAAAATCATCACTCAACCCCTGATCAACCATGATTTCCGCAACGCGTTGA > CP009273/372682‑373204 | tgtTGCACAGCGCGCTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAAGCCGGATaa > 1:406362/1‑275 (MQ=255) cgcgcTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGAATTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGGAGTGTAGACCGGCTCAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCCTCTTCTCAGGCCTACGGCTT‑AAGGGCGCCGTGTAGGCCGGCTAAGGGGtgcccg > 1:207973/1‑270 (MQ=38) acCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCa > 1:353257/1‑275 (MQ=255) acaAAGTGCCTGATGATTGTATGGTGTAAACATAGATAAGTCTTGCGCGGATGCCTCAGGAGACGCTATGCGCGTCTTATCAGGGCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGgccggataaggcgttcacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgctaacgcgt > 2:650044‑M2/2‑209 (MQ=255) tttGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTCTTATCAACGCATATTCAGTGTATTAGCGTGGTAGGCAata > 1:226382/1‑273 (MQ=255) aGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACg > 1:15020/1‑225 (MQ=255) aTAAGTCTTGCGCAGTGGCCTGATGGTACGCTATGCGCGTCTTATCAGGCCTACGGTTGATGGGCGAAGTGGAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATGGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGga < 1:154444/274‑1 (MQ=255) aTAAGACGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTTCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCCATAAACCTg > 1:255338/1‑272 (MQ=255) aaGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCata < 2:15020/225‑1 (MQ=255) tcgcTGATGCCTGATGCGACGCTATGCGAGTCTTATCAGGCCTACGGTTTATGGGTGAAGTGTAGACCGGATAATGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAaataa < 1:404979/274‑1 (MQ=255) gcgcAGAGGCATGATGCGACGCTATGCGCGTCTTATCAGACCTACGGTTTATGGGCGAAGTGTAGACCGGAGAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTGATCAGGCCTACGGCGT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATc < 1:467860/210‑1 (MQ=255) gcAGATGCCGGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATAtt < 1:6588/218‑1 (MQ=255) ttGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCCACGCATATTCAATTTATTGGCTTGGTCAGCAATCTGCTCGCCCATAAAACTGGAGACAAAATAATAGCtg < 1:429802/274‑1 (MQ=255) gtttcGAGGCTATGCGCTTATTATAAGGCCTACGGTTTATGGGGGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCTATGACTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCa < 1:409860/271‑1 (MQ=255) aCGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGc > 2:362068/1‑177 (MQ=255) taagcgcGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACAAATTCTCGCGCCACCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGt < 1:381356/177‑1 (MQ=17) tATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTc < 1:362075/177‑1 (MQ=255) tGCGCGTCTTATCAGGCCTACTGTTTATGGTCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGGTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAAAAAAAGCTGTGATAATAAAACTCgcg > 1:236502/1‑272 (MQ=255) tGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCANGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCAAATAAAACTGGAGACAAAATAATAGCTGTGAAAAAAAACCTCGTg > 1:676171/1‑274 (MQ=255) cgcgTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTCTTATCAACGCATATTCAGTTTCTTGGCGTGGTTGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGCTCATAACCCTCATGCTa > 1:22264/1‑275 (MQ=255) tATCGGGCCTAAGGTGTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCGTTGCGCGTCTTATCAGGCCTACAAATTCTCGCGCCACCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGt < 1:551611/169‑1 (MQ=11) agggatACGGTTTATGGGCGAAGTGTAGGCGGGATAAGGCGTTCACGCCGCCTGCGGCAGTCGTGCGCCATGACTGATGCGACGCTGTGCGCGTCTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTAACg < 1:82572/270‑1 (MQ=255) gCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCAGCATCCGGc > 1:638556/1‑156 (MQ=255) cTACGGTTTATGGGCGAAGTTCAGACCGGGTAAGGCTTTCACGCCGCATCCGGCAGTCGTGCTCCATGCCTGATGCTACGCTTTGCGCGTCTTATCAGTCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTAACGTc < 2:676157/273‑1 (MQ=255) aCGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTc < 2:638542/156‑1 (MQ=255) atccgtAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATc < 2:651932/149‑1 (MQ=255) agggtAGCCCGAATCATGCGTTGCCGCCGCATCCGTCAGTCGCTCGCCATGCCTTATTGGACGTTTTGCGCTTTTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCTCGCCGCATCCGGCAGTAGTGCTATTATAAAAGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGAGCATAACCCTCGTGATAACGGATTAACGTCTTGATATTCATCTCCTGGc < 2:632500/272‑1 (MQ=255) aTAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCNATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTAACGTCTTGATATTCATCTCCTGGCAGATCTTTTCa > 1:540962/1‑274 (MQ=255) aTAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTAACGTCTTGATATTCATCTCCTGGCAGATCTTTTCaa > 1:639836/1‑275 (MQ=255) tCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGc > 2:327944/1‑116 (MQ=255) tCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAataata > 2:86275/1‑198 (MQ=255) ggccgccgccGGCNGTCGTGCGCTCTGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTAACGTCTTGATATTCATCTCCTGGCAGATCTTTTCAAGATTTGGAGTc < 2:540952/273‑1 (MQ=255) gccgcATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCtg < 1:86276/198‑1 (MQ=255) gccgcACCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTc < 1:327950/116‑1 (MQ=255) ccgcACCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTNGCGCGTCTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGACGTGTTCATAACCCTCGTGATAACGGAtt < 1:514493/224‑1 (MQ=255) cATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAg > 2:318092/1‑110 (MQ=255) cGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGt < 1:318098/110‑1 (MQ=255) tgcgcagaTGCCTGATGCGACGC‑TAACGCGTCTTATCAGACCTACAAATTCTCACGCCATCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTAACGTCTTGATATTCATCTCCTGGCAGATCTTTTCAAGATTTGGAGTCCGCAGCTGTTCTGCGTa > 1:358577/8‑274 (MQ=25) tGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTGCACGCCGCATCCGGCAGTCGTGCTAGTATCAACGCATATTCAGTCTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAAGAATAGCTGTGATCATAACCCTCGTGCTAACGGATGAACGGATTGAAATTAATCTCCTGGCAGCCCTTTTCACGACTTGGAGTCAGCAGCTggcccgatgtc > 2:110040/1‑264 (MQ=37) aTGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGNCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTAACGTCTTGATATTCATCTCCTGGCAGATCTTTTCAAGATTTGGAGTCCGCAGCTGTTCTGCGTAAAAatcat < 1:562010/275‑1 (MQ=255) tGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCCATATGCTCGCCAATAAAACTGGGGACa > 2:320222/1‑162 (MQ=255) aTGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGgccggataaggcgttcacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgctaac < 1:547884‑M2/114‑63 (MQ=255) aTGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACg > 2:446372/1‑101 (MQ=255) aTGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAATCCTCGTGATAACGGATTAACGTCTTGATATTCATCTCCTGGCAGATCTTTTCAAGATTTGGAGTCCGAAGCTGTTCTGCGTAAAAATCATCACTCaa > 1:415347/1‑275 (MQ=255) aTGCGACGC‑TAACGCGTCTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCtat > 1:350341/1‑92 (MQ=14) aTGCGACGC‑TAACGCGTCTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGAGTAACGTCTTGATATTCATCTCCTGGCAGATCTTTTCAAGATTTGGAGTCCGCAGCTGTTCTACGTAAAAATCATCACTCCAc > 1:188501/1‑275 (MQ=255) tGCGACGCTTTGCGCGTCTCATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTAACGTCTTGATATTCATCTCCTGGCAGATCTTTTCAAGATTTGGAGTCCGCAGCTTTTCTGCGTaaaaacggtctcttat > 1:581431/1‑263 (MQ=255) gACGCTTTGCGCGTCTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGgccggataaggcgttcacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgctaacgcgt > 2:547873‑M2/1‑48 (MQ=255) gACGCTTTGCGCGTCTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCata < 1:446379/101‑1 (MQ=255) cGCTTTGCGCGTCTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAataata > 2:588898/1‑158 (MQ=255) cGCTTTGCGCGTCTTATCAGGCCTACGGATT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAAc > 1:531414/1‑142 (MQ=255) ttGCGCGTCTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGga < 2:531405/142‑1 (MQ=255) ttGCGCGTCTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCtg < 1:588911/158‑1 (MQ=255) tGCGCGTCTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCTGGATAAGGCGtt > 1:244177/1‑56 (MQ=255) gTCTTATCAGGCCTACGGTTT‑ATGGGCGAAGTGTAGgccggataaggcgttcacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgctaacgcgtcttatcagtcctacaaattcccgcgcca < 2:523749‑M2/130‑95 (MQ=255) tCTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCtat > 1:736424/1‑76 (MQ=255) cTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGtt > 2:154354/1‑49 (MQ=255) cTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCgg > 1:414629/1‑63 (MQ=255) cTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGCCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGAGTGGAAGGCAATATTCTCGCCAATACAACTGGAGACAAAATAATAGCTGTCATCATTACCCTCGTGATACCGGAt > 1:479402/1‑176 (MQ=37) tATCAGCCCTACGGTTT‑ATGGGCGAAGTGTAGgccggataaggcgttcacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgctaacgcgtctaatcacgcctacaacttcccgcgccatccg > 1:523758‑M2/1‑32 (MQ=255) aTCAGGCCTACGGTTT‑ATGGGCGAAGTGTAGaccggataaggcgttcacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgctaac < 2:294428‑M2/93‑63 (MQ=255) aTCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATc < 2:736410/76‑1 (MQ=255) tCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCAcg < 1:154355/49‑1 (MQ=255) tCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGt < 2:414622/63‑1 (MQ=255) ggCCTACGGTTT‑ATGGGCGAAGTGTAGaccggataaggcgttcacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgctaacgcgt > 1:294433‑M2/1‑27 (MQ=255) gCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCaa > 1:85526/1‑104 (MQ=255) tACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTAACGTCTTGATATTCATCTCCTGGCAGATCt > 2:299082/1‑197 (MQ=255) aCGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATg < 2:85525/104‑1 (MQ=255) gCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTAACGTCTTGATATTCATCTCCTGGCAGATCTTTTc < 1:299087/197‑1 (MQ=255) t‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCa > 2:59238/1‑67 (MQ=255) t‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTAACGTCTTGa > 1:431128/1‑169 (MQ=255) t‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTAACGTCTTGATATTCATCTCCTGGCAGATCTTTTCAAGATTTGGAGTCCGCAGCTGTTCTGCGTAAAAATCATCACTCAACCCCTGATCAACCATGATTTCCGCAACGCGTTGa > 2:95343/1‑273 (MQ=255) aCGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCtat > 2:207890/1‑56 (MQ=255) ggCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATAtt < 1:59239/67‑1 (MQ=255) ggCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTAACGTCTTGATAtt < 2:431121/169‑1 (MQ=255) gCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATc < 1:207892/56‑1 (MQ=255) ggCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACaaa > 1:16203/1‑107 (MQ=255) ggCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCtgt < 2:551801/118‑1 (MQ=255) | TGTTGCACAGCGCGCTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTT‑ACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTAACGTCTTGATATTCATCTCCTGGCAGATCTTTTCAAGATTTGGAGTCCGCAGCTGTTCTGCGTAAAAATCATCACTCAACCCCTGATCAACCATGATTTCCGCAACGCGTTGA > CP009273/372682‑373204 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |